Rroxscaffold_7G00211140

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001292
Physical Location & Seq
Reverse (-)
61599339 .. 61601348
2010 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00211140.1

Sequence Viewer

Length: 2010 bp
ATGGCTCCTGCATTATGCCTAGTAGGTCCACCAGAGCTGCACCAGCCCAAAAAACCTCCCACCACTCCTATCTCAACCTATGAAGACCTCCCACTTTGTAAAGATCTCAAGTCTTCACTCCCACCCTTAAACCCTCTCCTTGAATTTTTTTTCAAGGCCGTGTCACACACTGAAACGCCGCCAGAGACTCCCAAGTACGGATATTATTGGCTGTCGGCTCCACCAAAGCCGAAGGAGCTGACCGACTATGAAGAAGAGGCCTGGAAGCTTGACTCTCTCACCACTCTCAAGACGATAGTTTGTCTTAGAATGATGGAGAAGCCTAACAAAGAAGCGTTCTACAAATCCCTCTTGTGGGTCCACAAAAACCACCCAAAAACCCTAGCTCTGAATGTCATGGTTTTCGGGGCTTTAGGTTGGTTCGATGATCTGTTGGAAATTCTCAAAAGGGTTTTGGAGGACTCCATTCATAGACTTGCAAACCCAGAAAAGAAGGATGAGCTAATTATATCAAACTACAGGAGGAGGATATCAAACTACAGGAGCAATCGTTTGGGATACGACTATGAGGAAGAAAGTGATGACGATGATGATGACGAAAAGAAGACGAAAGCTGCCGCAGAAATAGCACCAAAAGATGACATTGCAAAGGCTATAATTGCAGTTGAGAGGTACCAAAACGACTCAGATTATCGATTCTTACACGATCGGATATCTGACTTGTTTGCAGAGGTGTTGAAATCAGATCTGAGGTTCTTGGCATCAGGTGCAATTAAATCGATAAGTTTTGCTTCCAATTTTTGTCCTTCAATTGATTCCCCTTACGACTACGAAACCCTAATCTGTGAAAGCATAGCAAAGAAAATGTTCCCACGCAATAATCATATAGAGTACAAATATGTTGAAGACCCTTATTACACTTACAGGGTTCGTAATCGTTTGGGGGACCAAGTACTAATTCCTCTACGTGAAACCATAGAGAAGGTGAAGAAGCCATCAATTGAAACCGGAAAAGCATTGATTGCTCTGGAAACATACAGGAAGATATTCAGGCCGGAGTCAAAAGAAGAAGACGGCAGCATAGTGCTGTTTCATCATTGCATGAAGCTAATCGAGTTCTTTTCACCGAAGGAAAATATGGTCGGCATGTTTGGGAATTTAAGCATTGGCGACTGTTCTAAAAAGCTCCCTCACCAAATAGTGGTTTCCTTATTTAAGAAGGAAGAGGTAAAGGGACGTGGACCACGTGGTGATGAAGCTGCAGAGCTCGAGTGGAAGGGACTACTGCAAGAGTTAACAAACCAAGGCAAGCTCAGGAATTGTGTTACCGTCTGTGACATGAGGTCGAGCATGACAGGGACATTCAAGGAGGCGGCTTGTATCTCAATGGGGTTACTGATTTCGGAGTTGAGTGAAAATCCATGGAAAGGAAAGATCTTCTCCTTCAACGAATTTCCCAAGCTGAATAAGGTTGAAGGAGACGATCTTCGATCCAAATGCGAGTTCATAAGGCAGATGGAATGCACTGAGAAAGTTAACTTCGGCGCTATTTACAGTCGGATTTTGCAGATTGCACTCACAGAGAAGCTAAGCAAGGAGCAAATGCCTAAAAGGATTTTCGTCTTCACCTATAGTGATTTTGTCGCGGCCTCCAAAAACAACTGGGATGAAGAATACAGGGAAGCATGGGCTAGTTACAGAAAGAGAGGGTTTTCAACTGTGCCGCAAATGGTGTTTTGGAATCTTAGGGACCCGGTTGCGGAGCCGGAGGTATTTGGGAGCCCGGTGAAGAACCAAAATGGGGGGATGATCATGACTGGTTTTTCAAACCTTCTGCTCAAACTGTTCTTCAGAGGAGAGACGGATTCGAGAACGAATGCAGGTCGGAGCCATTCTTTTTATCGTGGTGTTAATGTACTTTCCGTGATGAAATATGTTCCTAATGTAGAGGATGTGATGAACTGTGCAATTTCAAGAGAGGAGTTGAAGAATCTTATTGTATTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

669

Amino Acids

77.01

Weight (kDa)

6.49

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 75 - 329 2.4e-52 Domain of unknown function (DUF2828)
DUF7788 PF25043 440 - 622 1.8e-43 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1871
Acc65I GGTACC 1 cut(s) 672
AccB1I GGYRCC 1 cut(s) 672
AccB7I CCANNNNNTGG 1 cut(s) 1201
AccII CGCG 1 cut(s) 1646
AciI CCGC 6 cut(s) 179, 618, 1373, 1646, 1724, 1760
AclWI GGATC 1 cut(s) 1485
AcsI RAATTY 4 cut(s) 143, 438, 1156, 1451
AcuI CTGAAG 1 cut(s) 1834
AcvI CACGTG 1 cut(s) 1247
AdeI CACNNNGTG 1 cut(s) 1250
AfaI GTAC 5 cut(s) 197, 674, 893, 954, 1917
AfiI CCNNNNNNNGG 7 cut(s) 197, 354, 355, 1201, 1427, 1759, 1801
AhdI GACNNNNNGTC 1 cut(s) 1342
AjiI CACGTC 1 cut(s) 1238
AjnI CCWGG 1 cut(s) 260
AjuI GAANNNNNNNTTGG 4 cut(s) 942, 974, 1487, 1519
Alw21I GWGCWC 1 cut(s) 1269
Alw26I GTCTC 3 cut(s) 179, 1473, 1853
AlwI GGATC 1 cut(s) 1485
Ama87I CYCGRG 1 cut(s) 1268
AoxI GGCC 4 cut(s) 156, 258, 1052, 1647
ApeKI GCWGC 4 cut(s) 37, 614, 1077, 1259
ApoI RAATTY 4 cut(s) 143, 438, 1156, 1451
Asp700I GAANNNNTTC 2 cut(s) 866, 1046
Asp718I GGTACC 1 cut(s) 672
AspLEI GCGC 1 cut(s) 1547
AspS9I GGNCC 5 cut(s) 26, 358, 946, 1241, 1750
AsuC2I CCSGG 2 cut(s) 1754, 1784
AsuHPI GGTGA 7 cut(s) 271, 997, 1116, 1184, 1262, 1618, 1798
AvaI CYCGRG 1 cut(s) 1268
AvaII GGWCC 5 cut(s) 26, 358, 946, 1241, 1750
BanI GGYRCC 1 cut(s) 672
BanII GRGCYC 2 cut(s) 1269, 1784
BbrPI CACGTG 1 cut(s) 1247
BbsI GAAGAC 6 cut(s) 90, 105, 611, 912, 1077, 1615
Bbv12I GWGCWC 1 cut(s) 1269
BbvI GCAGC 4 cut(s) 24, 601, 1089, 1246
BccI CCATC 3 cut(s) 307, 1003, 1510
BceAI ACGGC 2 cut(s) 143, 1090
BcgI CGANNNNNNTGC 4 cut(s) 759, 793, 1479, 1513
BciT130I CCWGG 1 cut(s) 262
BciVI GTATCC 1 cut(s) 551
BclI TGATCA 1 cut(s) 1809
BcnI CCSGG 2 cut(s) 1754, 1784
BcoDI GTCTC 3 cut(s) 179, 1473, 1853
BfaI CTAG 3 cut(s) 20, 383, 1692
BfmI CTRYAG 4 cut(s) 517, 538, 1260, 1630
BfoI RGCGCY 1 cut(s) 1548
BfuAI ACCTGC 1 cut(s) 1871
BfuI GTATCC 1 cut(s) 551
BglII AGATCT 3 cut(s) 103, 745, 1434
BisI GCNGC 9 cut(s) 38, 179, 615, 618, 1078, 1260, 1374, 1647, 1724
BlpI GCTNAGC 1 cut(s) 1589
BlsI GCNGC 9 cut(s) 39, 180, 616, 619, 1079, 1261, 1375, 1648, 1725
BmcAI AGTACT 1 cut(s) 954
Bme1390I CCNGG 3 cut(s) 262, 1754, 1784
Bme18I GGWCC 5 cut(s) 26, 358, 946, 1241, 1750
BmeRI GACNNNNNGTC 1 cut(s) 1342
BmeT110I CYCGRG 1 cut(s) 1268
BmgBI CACGTC 1 cut(s) 1238
BmgT120I GGNCC 5 cut(s) 26, 358, 946, 1241, 1750
BmrFI CCNGG 3 cut(s) 262, 1754, 1784
BmrI ACTGGG 1 cut(s) 1672
BmsI GCATC 1 cut(s) 770
BmuI ACTGGG 1 cut(s) 1672
BpiI GAAGAC 6 cut(s) 90, 105, 611, 912, 1077, 1615
Bpu10I CCTNAGC 1 cut(s) 1313
Bpu1102I GCTNAGC 1 cut(s) 1589
BpuEI CTTGAG 2 cut(s) 92, 272
BpuMI CCSGG 2 cut(s) 1754, 1784
Bsa29I ATCGAT 2 cut(s) 694, 779
BsaAI YACGTR 2 cut(s) 968, 1247
BsaJI CCNNGG 2 cut(s) 1303, 1421
BsaWI WCCGGW 1 cut(s) 1007
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bsc4I CCNNNNNNNGG 7 cut(s) 197, 354, 355, 1201, 1427, 1759, 1801
Bse1I ACTGG 2 cut(s) 1667, 1822
Bse3DI GCAATG 2 cut(s) 642, 1096
BseBI CCWGG 1 cut(s) 262
BseCI ATCGAT 2 cut(s) 694, 779
BseDI CCNNGG 2 cut(s) 1303, 1421
BseGI GGATG 4 cut(s) 502, 1672, 1812, 1957
BseLI CCNNNNNNNGG 7 cut(s) 197, 354, 355, 1201, 1427, 1759, 1801
BseMI GCAATG 2 cut(s) 642, 1096
BseMII CTCAG 4 cut(s) 699, 740, 1327, 1518
BseNI ACTGG 2 cut(s) 1667, 1822
BseRI GAGGAG 3 cut(s) 538, 1869, 1994
BseXI GCAGC 4 cut(s) 24, 601, 1089, 1246
BsgI GTGCAG 1 cut(s) 23
Bsh1236I CGCG 1 cut(s) 1646
Bsh1285I CGRYCG 1 cut(s) 709
BshFI GGCC 4 cut(s) 158, 260, 1054, 1649
BshNI GGYRCC 1 cut(s) 672
BshVI ATCGAT 2 cut(s) 694, 779
BsiEI CGRYCG 1 cut(s) 709
BsiHKAI GWGCWC 1 cut(s) 1269
BsiHKCI CYCGRG 1 cut(s) 1268
BsiSI CCGG 5 cut(s) 1008, 1055, 1754, 1766, 1784
BslFI GGGAC 5 cut(s) 959, 1248, 1293, 1372, 1763
BslI CCNNNNNNNGG 7 cut(s) 197, 354, 355, 1201, 1427, 1759, 1801
BsmAI GTCTC 3 cut(s) 179, 1473, 1853
BsmBI CGTCTC 2 cut(s) 1473, 1853
BsmFI GGGAC 5 cut(s) 959, 1248, 1293, 1372, 1763
BsmI GAATGC 2 cut(s) 1526, 1882
BsnI GGCC 4 cut(s) 158, 260, 1054, 1649
BsoBI CYCGRG 1 cut(s) 1268
Bsp1286I GDGCHC 2 cut(s) 1269, 1784
Bsp143I GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
Bsp1720I GCTNAGC 1 cut(s) 1589
Bsp19I CCATGG 1 cut(s) 1421
BspACI CCGC 6 cut(s) 179, 618, 1373, 1646, 1724, 1760
BspANI GGCC 4 cut(s) 158, 260, 1054, 1649
BspCNI CTCAG 4 cut(s) 698, 741, 1326, 1519
BspDI ATCGAT 2 cut(s) 694, 779
BspFNI CGCG 1 cut(s) 1646
BspHI TCATGA 1 cut(s) 1812
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 1 cut(s) 1871
BspPI GGATC 1 cut(s) 1485
BspT107I GGYRCC 1 cut(s) 672
BsrDI GCAATG 2 cut(s) 642, 1096
BsrI ACTGG 2 cut(s) 1667, 1822
BssECI CCNNGG 2 cut(s) 1303, 1421
BssMI GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
BssT1I CCWWGG 2 cut(s) 1303, 1421
Bst2UI CCWGG 1 cut(s) 262
Bst4CI ACNGT 6 cut(s) 1175, 1330, 1556, 1720, 1845, 1964
Bst6I CTCTTC 2 cut(s) 249, 1218
BstAPI GCANNNNNTGC 2 cut(s) 767, 1022
BstBAI YACGTR 2 cut(s) 968, 1247
BstC8I GCNNGC 1 cut(s) 1310
BstDEI CTNAG 7 cut(s) 305, 685, 749, 1313, 1527, 1589, 1745
BstDSI CCRYGG 1 cut(s) 1421
BstF5I GGATG 4 cut(s) 502, 1672, 1812, 1957
BstFNI CGCG 1 cut(s) 1646
BstH2I RGCGCY 1 cut(s) 1548
BstHHI GCGC 1 cut(s) 1547
BstKTI GATC 8 cut(s) 106, 430, 709, 748, 1437, 1486, 1493, 1812
BstMAI GTCTC 3 cut(s) 179, 1473, 1853
BstMBI GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
BstMCI CGRYCG 1 cut(s) 709
BstMWI GCNNNNNNNGC 6 cut(s) 43, 235, 626, 659, 767, 1022
BstNI CCWGG 1 cut(s) 262
BstNSI RCATGY 1 cut(s) 1150
BstSCI CCNGG 3 cut(s) 260, 1752, 1782
BstSFI CTRYAG 4 cut(s) 517, 538, 1260, 1630
BstUI CGCG 1 cut(s) 1646
BstV1I GCAGC 4 cut(s) 24, 601, 1089, 1246
BstV2I GAAGAC 6 cut(s) 90, 105, 611, 912, 1077, 1615
BstX2I RGATCY 3 cut(s) 103, 745, 1434
BstYI RGATCY 3 cut(s) 103, 745, 1434
Bsu15I ATCGAT 2 cut(s) 694, 779
BsuI GTATCC 1 cut(s) 551
BsuRI GGCC 4 cut(s) 158, 260, 1054, 1649
BsuTUI ATCGAT 2 cut(s) 694, 779
BtgI CCRYGG 1 cut(s) 1421
BtrI CACGTC 1 cut(s) 1238
BtsCI GGATG 4 cut(s) 502, 1672, 1812, 1957
BtsIMutI CAGTG 2 cut(s) 168, 1524
BveI ACCTGC 1 cut(s) 1871
Cac8I GCNNGC 1 cut(s) 1310
CciI TCATGA 1 cut(s) 1812
CfoI GCGC 1 cut(s) 1547
Cfr13I GGNCC 5 cut(s) 26, 358, 946, 1241, 1750
ClaI ATCGAT 2 cut(s) 694, 779
Csp6I GTAC 5 cut(s) 196, 673, 892, 953, 1916
CviAII CATG 8 cut(s) 397, 1102, 1147, 1339, 1351, 1422, 1686, 1813
CviQI GTAC 5 cut(s) 196, 673, 892, 953, 1916
DdeI CTNAG 7 cut(s) 305, 685, 749, 1313, 1527, 1589, 1745
DpnI GATC 8 cut(s) 105, 429, 708, 747, 1436, 1485, 1492, 1811
DpnII GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
DraIII CACNNNGTG 1 cut(s) 1250
DriI GACNNNNNGTC 1 cut(s) 1342
Eam1104I CTCTTC 2 cut(s) 249, 1218
Eam1105I GACNNNNNGTC 1 cut(s) 1342
EarI CTCTTC 2 cut(s) 249, 1218
Ecl136II GAGCTC 1 cut(s) 1267
Eco130I CCWWGG 2 cut(s) 1303, 1421
Eco147I AGGCCT 1 cut(s) 260
Eco24I GRGCYC 2 cut(s) 1269, 1784
Eco32I GATATC 2 cut(s) 531, 714
Eco47I GGWCC 5 cut(s) 26, 358, 946, 1241, 1750
Eco53kI GAGCTC 1 cut(s) 1267
Eco57I CTGAAG 1 cut(s) 1834
Eco72I CACGTG 1 cut(s) 1247
Eco88I CYCGRG 1 cut(s) 1268
EcoICRI GAGCTC 1 cut(s) 1267
EcoO109I RGGNCCY 1 cut(s) 1750
EcoRII CCWGG 1 cut(s) 260
EcoRV GATATC 2 cut(s) 531, 714
EcoT14I CCWWGG 2 cut(s) 1303, 1421
EcoT38I GRGCYC 2 cut(s) 1269, 1784
ErhI CCWWGG 2 cut(s) 1303, 1421
Esp3I CGTCTC 2 cut(s) 1473, 1853
FaeI CATG 8 cut(s) 400, 1105, 1150, 1342, 1354, 1425, 1689, 1816
FalI AAGNNNNNCTT 2 cut(s) 775, 807
FaqI GGGAC 5 cut(s) 959, 1248, 1293, 1372, 1763
FatI CATG 8 cut(s) 396, 1101, 1146, 1338, 1350, 1421, 1685, 1812
FbaI TGATCA 1 cut(s) 1809
Fnu4HI GCNGC 9 cut(s) 38, 179, 615, 618, 1078, 1260, 1374, 1647, 1724
FokI GGATG 4 cut(s) 509, 1679, 1819, 1964
FriOI GRGCYC 2 cut(s) 1269, 1784
Fsp4HI GCNGC 9 cut(s) 38, 179, 615, 618, 1078, 1260, 1374, 1647, 1724
FspBI CTAG 3 cut(s) 20, 383, 1692
GlaI GCGC 1 cut(s) 1546
GluI GCNGC 9 cut(s) 38, 179, 615, 618, 1078, 1260, 1374, 1647, 1724
HaeII RGCGCY 1 cut(s) 1548
HaeIII GGCC 4 cut(s) 158, 260, 1054, 1649
HapII CCGG 5 cut(s) 1008, 1055, 1754, 1766, 1784
HhaI GCGC 1 cut(s) 1547
Hin1II CATG 8 cut(s) 400, 1105, 1150, 1342, 1354, 1425, 1689, 1816
Hin6I GCGC 1 cut(s) 1545
HinP1I GCGC 1 cut(s) 1545
HincII GTYRAC 2 cut(s) 1296, 1537
HindII GTYRAC 2 cut(s) 1296, 1537
HindIII AAGCTT 1 cut(s) 266
HpaI GTTAAC 2 cut(s) 1296, 1537
HpaII CCGG 5 cut(s) 1008, 1055, 1754, 1766, 1784
HphI GGTGA 7 cut(s) 271, 997, 1116, 1184, 1262, 1618, 1798
Hpy166II GTNNAC 5 cut(s) 29, 361, 1241, 1296, 1537
Hpy188III TCNNGA 6 cut(s) 289, 1028, 1315, 1813, 1869, 1974
Hpy8I GTNNAC 5 cut(s) 29, 361, 1241, 1296, 1537
HpyCH4III ACNGT 6 cut(s) 1175, 1330, 1556, 1720, 1845, 1964
HpyCH4IV ACGT 3 cut(s) 967, 1237, 1246
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 235, 626, 659, 767, 1022
HpyF3I CTNAG 7 cut(s) 305, 685, 749, 1313, 1527, 1589, 1745
HpySE526I ACGT 3 cut(s) 967, 1237, 1246
Hsp92II CATG 8 cut(s) 400, 1105, 1150, 1342, 1354, 1425, 1689, 1816
HspAI GCGC 1 cut(s) 1545
KflI GGGWCCC 1 cut(s) 1750
KpnI GGTACC 1 cut(s) 676
Ksp22I TGATCA 1 cut(s) 1809
KspAI GTTAAC 2 cut(s) 1296, 1537
Kzo9I GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
LmnI GCTCC 9 cut(s) 10, 223, 235, 543, 1191, 1597, 1762, 1779, 1887
Lsp1109I GCAGC 4 cut(s) 24, 601, 1089, 1246
LweI GCATC 1 cut(s) 770
MaeI CTAG 3 cut(s) 20, 383, 1692
MaeII ACGT 3 cut(s) 967, 1237, 1246
MaeIII GTNAC 5 cut(s) 162, 1324, 1334, 1392, 1694
MalI GATC 8 cut(s) 105, 429, 708, 747, 1436, 1485, 1492, 1811
MboI GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
MfeI CAATTG 2 cut(s) 810, 999
MflI RGATCY 3 cut(s) 103, 745, 1434
MhlI GDGCHC 2 cut(s) 1269, 1784
MlyI GAGTC 5 cut(s) 181, 266, 455, 677, 1067
MmeI TCCRAC 3 cut(s) 414, 1538, 1865
MroXI GAANNNNTTC 2 cut(s) 866, 1046
MseI TTAA 7 cut(s) 128, 774, 1160, 1215, 1295, 1536, 1911
MspI CCGG 5 cut(s) 1008, 1055, 1754, 1766, 1784
MspR9I CCNGG 3 cut(s) 262, 1754, 1784
MunI CAATTG 2 cut(s) 810, 999
Mva1269I GAATGC 2 cut(s) 1526, 1882
MvaI CCWGG 1 cut(s) 262
MvnI CGCG 1 cut(s) 1646
MwoI GCNNNNNNNGC 6 cut(s) 43, 235, 626, 659, 767, 1022
NciI CCSGG 2 cut(s) 1754, 1784
NcoI CCATGG 1 cut(s) 1421
NdeII GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
NlaIII CATG 8 cut(s) 400, 1105, 1150, 1342, 1354, 1425, 1689, 1816
NmuCI GTSAC 2 cut(s) 162, 1334
NspI RCATGY 1 cut(s) 1150
PaeR7I CTCGAG 1 cut(s) 1268
PagI TCATGA 1 cut(s) 1812
PceI AGGCCT 1 cut(s) 260
PcsI WCGNNNNNNNCGW 1 cut(s) 1243
PctI GAATGC 2 cut(s) 1526, 1882
PdmI GAANNNNTTC 2 cut(s) 866, 1046
PfeI GAWTC 5 cut(s) 696, 815, 1741, 1865, 1990
PflMI CCANNNNNTGG 1 cut(s) 1201
PkrI GCNGC 9 cut(s) 39, 180, 616, 619, 1079, 1261, 1375, 1648, 1725
Ple19I CGATCG 1 cut(s) 709
PleI GAGTC 5 cut(s) 181, 266, 455, 677, 1066
PmaCI CACGTG 1 cut(s) 1247
PmlI CACGTG 1 cut(s) 1247
PpsI GAGTC 5 cut(s) 181, 266, 455, 677, 1066
Ppu21I YACGTR 2 cut(s) 968, 1247
PpuMI RGGWCCY 1 cut(s) 1750
Psp124BI GAGCTC 1 cut(s) 1269
Psp5II RGGWCCY 1 cut(s) 1750
Psp6I CCWGG 1 cut(s) 260
PspCI CACGTG 1 cut(s) 1247
PspGI CCWGG 1 cut(s) 260
PspPI GGNCC 5 cut(s) 26, 358, 946, 1241, 1750
PspPPI RGGWCCY 1 cut(s) 1750
PspXI VCTCGAGB 1 cut(s) 1268
PstI CTGCAG 1 cut(s) 1264
PsuI RGATCY 3 cut(s) 103, 745, 1434
PvuI CGATCG 1 cut(s) 709
RsaI GTAC 5 cut(s) 197, 674, 893, 954, 1917
RsaNI GTAC 5 cut(s) 196, 673, 892, 953, 1916
SacI GAGCTC 1 cut(s) 1269
SaqAI TTAA 7 cut(s) 128, 774, 1160, 1215, 1295, 1536, 1911
SatI GCNGC 9 cut(s) 38, 179, 615, 618, 1078, 1260, 1374, 1647, 1724
Sau3AI GATC 8 cut(s) 103, 427, 706, 745, 1434, 1483, 1490, 1809
Sau96I GGNCC 5 cut(s) 26, 358, 946, 1241, 1750
ScaI AGTACT 1 cut(s) 954
SchI GAGTC 5 cut(s) 181, 266, 455, 677, 1067
ScrFI CCNGG 3 cut(s) 262, 1754, 1784
SduI GDGCHC 2 cut(s) 1269, 1784
SfaNI GCATC 1 cut(s) 770
SfcI CTRYAG 4 cut(s) 517, 538, 1260, 1630
Sfr274I CTCGAG 1 cut(s) 1268
SinI GGWCC 5 cut(s) 26, 358, 946, 1241, 1750
SlaI CTCGAG 1 cut(s) 1268
SmlI CTYRAG 3 cut(s) 107, 287, 1268
SmoI CTYRAG 3 cut(s) 107, 287, 1268
SseBI AGGCCT 1 cut(s) 260
SsiI CCGC 6 cut(s) 179, 618, 1373, 1646, 1724, 1760
SspMI CTAG 3 cut(s) 20, 383, 1692
SstI GAGCTC 1 cut(s) 1269
StuI AGGCCT 1 cut(s) 260
StyD4I CCNGG 3 cut(s) 260, 1752, 1782
StyI CCWWGG 2 cut(s) 1303, 1421
TaaI ACNGT 6 cut(s) 1175, 1330, 1556, 1720, 1845, 1964
TaiI ACGT 3 cut(s) 970, 1240, 1249
TaqI TCGA 8 cut(s) 423, 694, 779, 1113, 1269, 1346, 1489, 1868
TaqII GACCGA 1 cut(s) 257
TatI WGTACW 3 cut(s) 891, 952, 1915
TauI GCSGC 5 cut(s) 181, 620, 1376, 1649, 1726
TfiI GAWTC 5 cut(s) 696, 815, 1741, 1865, 1990
Tru1I TTAA 7 cut(s) 128, 774, 1160, 1215, 1295, 1536, 1911
Tru9I TTAA 7 cut(s) 128, 774, 1160, 1215, 1295, 1536, 1911
TscAI CASTG 2 cut(s) 175, 1531
TseFI GTSAC 2 cut(s) 162, 1334
TseI GCWGC 4 cut(s) 37, 614, 1077, 1259
Tsp45I GTSAC 2 cut(s) 162, 1334
TspGWI ACGGA 3 cut(s) 213, 1877, 1912
TspRI CASTG 2 cut(s) 175, 1531
Van91I CCANNNNNTGG 1 cut(s) 1201
VpaK11BI GGWCC 5 cut(s) 26, 358, 946, 1241, 1750
XapI RAATTY 4 cut(s) 143, 438, 1156, 1451
XceI RCATGY 1 cut(s) 1150
XhoI CTCGAG 1 cut(s) 1268
XmnI GAANNNNTTC 2 cut(s) 866, 1046
XspI CTAG 3 cut(s) 20, 383, 1692
ZrmI AGTACT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.