Rh6DG056000

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0001292
Physical Location & Seq
Forward (+)
5798880 .. 5801086
2207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG056000.1

Sequence Viewer

Length: 1998 bp
ATGGCTCCTGCATTATGCCTAGTAGGTCCACCAGAGCTCCACCAGCCCAAAAAACCTCCCACCACTCCTATCTCAACCTATGAAGACCTCCCACTTTGTAAAGATCTCAAGTCTTCACTCCCACCCTTAAACCCTCTCCTTGAATTTTTTTTCAAGGCCGTGTCACACACTGAAACGCCGCCACCGCCGCCAGAGACTCCCAAGTACGGATATTATTGGCTGTCGGCTCCACCAAAGCCGAAGGAGCTGACCTTCTATGAAGAAGAGGCCTGGAAGCTTGACTCTCTCACCACTCTCAAGACGATAGTTTGTCTTAGAATGATGGAGAAGCCTAACAAAGAAGCGTTCTACAAATGCCTCTTGTGGGTCCACAAAAACCACCCAAAAACCCTAGCTCTGAATGTCATGGTTTTCGGGGCTTTAGGGTGGTTCGAAGATCTGTTGGAAATTCTCAAAAGGGTTTTGGAGGACTCCATTCATAGACTTGCAAACCCAGAAAAGAAGGATGAGCTTATTATATCAAACTACAGGAGCAAGCGTTTGGGATACGACTATGAGGAAGAAAGTGATGATGATGATGACGACGAAAAGAAGACAATAGCTGCCGCAGAAATAGCACCAAAAGATGACATTGCAAAGGCTAGAATTGCAGTTGAGAGGTACCAAAACGACTCAGATTATCGATTCTTACACGATCGGATATCAGACTTGTTTGCAGAGGTGTTGAAATCAGATCTGAGGTTCTTGGCATCAGGTGCAATTAAATCGATAAGTTTTGCTTCCAAGTTTTGTCCTTCAATTGATTCCCCTTACGACTACGAAACCCTAATCTGTGAAAGCATAGCAAAGAAAATGTTCCCACGCAATAATCATATAGAGTACAAATATGTTGAAGATCCTTATTACACTTACAGGGTTCGTAATCGTTTGGGGGACCAAGTACTAATTCCTCTACGTGAAGCCATAGAGAAGGTGAAGAAGCCATCAATTGAAACCGGAAAAGCATTGATTGCTCTGGAAACATACAGGAAGATATTCAGGCCGGAGTCAAAAGAAGAAGGCGGCAGCATAGTGCTGTTTCATCATTGCATGAAGCTAATCGAGTTCTTTTCACCGAAGGAAAATATGGTCGACATGTTTGGGAATTTAAGCATTTGCGGCTGGTCTAAAAAGCTCCCTCACCAAATAGTGGTTTCCTTATTTAAGAAGGAAAAGGTAAAGGGACGTGGACCACGTGGTGATGAAGCTGCAGAGCTCGAGTGGAAGGGACTACTGCAAGAGTTAGCAAACCAAGGCAAGCTCAGGAATTGTGTTACCGTCTGTGACATGAGGTCGAGCATGACAGGGACATTCAAGGAGGCGGCTTGTATCTCATTGGGGTTATTGATTTCGGAGTTGAGTGAAAATCCATGGAAAGGAAAGATCTTCTCCTTCAACGAATTTCCCAAGCTGAATAAGGTTGAAGGAGACGATCTTCGATCCAAATGCGAGTTCATGAGGCAGATGGAATGCACTGAGAAAGTTAACTTCGGCTCTATTTACAACCGGATTTTGCAGATTGCACTCACAGAGAAGCTAAGCAAGGAGCAAATGCCTGAAAGGATTTTCGTCTTCACCTATAGTGATTTTGTCACGGCCTCCAAAAACAACTGGGATGAAGAATACAGGGAAGCTTGGGCTAGTTACAGAAAGAGAGGGTTTTCAACTGTGCCGCAAATGGTGTTTTGGAATCTTAGGGACCCGGTTGCGGAGCCGGAGGTATTTGGGAGCCCGGTGAAGAACCAAAATGGAGGGATGATCATGACTGGTTTTTCAAACCTTCTGCTCAAACTGTTCTTCGGAGGAGAGACGGATTCGAGAACGAATGCAGGTCGGAGCCATTCTTTTTATCGTGGTGTTAATGTACTTTCGGTGATGAAATATGTTCCTAAGGTAGAGGATGTGATGAACTGTGCAATTTCAAGAGAGGAGTTGAAGAATCTTATTGTATTGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

665

Amino Acids

76.47

Weight (kDa)

6.65

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 80 - 325 3.2e-53 Domain of unknown function (DUF2828)
DUF7788 PF25043 436 - 618 8.7e-43 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1859
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 1 cut(s) 660
AccB7I CCANNNNNTGG 1 cut(s) 1189
AccI GTMKAC 1 cut(s) 1131
AciI CCGC 9 cut(s) 179, 185, 188, 606, 1062, 1158, 1361, 1712, 1748
AclWI GGATC 2 cut(s) 890, 1473
AcsI RAATTY 4 cut(s) 143, 447, 1144, 1439
AcvI CACGTG 1 cut(s) 1235
AdeI CACNNNGTG 1 cut(s) 1238
AfaI GTAC 5 cut(s) 206, 662, 881, 942, 1905
AfiI CCNNNNNNNGG 5 cut(s) 206, 364, 1189, 1415, 1747
AflIII ACRYGT 1 cut(s) 1134
AhdI GACNNNNNGTC 1 cut(s) 1330
AjiI CACGTC 1 cut(s) 1226
AjnI CCWGG 1 cut(s) 269
AjuI GAANNNNNNNTTGG 4 cut(s) 930, 962, 1475, 1507
Alw21I GWGCWC 2 cut(s) 39, 1257
Alw26I GTCTC 3 cut(s) 188, 1461, 1841
AlwI GGATC 2 cut(s) 890, 1473
Ama87I CYCGRG 1 cut(s) 1256
AoxI GGCC 4 cut(s) 156, 267, 1040, 1635
ApeKI GCWGC 3 cut(s) 602, 1065, 1247
ApoI RAATTY 4 cut(s) 143, 447, 1144, 1439
Asp700I GAANNNNTTC 2 cut(s) 854, 1034
Asp718I GGTACC 1 cut(s) 660
AspS9I GGNCC 5 cut(s) 26, 367, 934, 1229, 1738
AsuC2I CCSGG 2 cut(s) 1742, 1772
AsuHPI GGTGA 8 cut(s) 280, 985, 1104, 1172, 1250, 1606, 1786, 1924
AsuII TTCGAA 1 cut(s) 432
AvaI CYCGRG 1 cut(s) 1256
AvaII GGWCC 5 cut(s) 26, 367, 934, 1229, 1738
AxyI CCTNAGG 1 cut(s) 1929
BanI GGYRCC 1 cut(s) 660
BanII GRGCYC 3 cut(s) 39, 1257, 1772
BbrPI CACGTG 1 cut(s) 1235
BbsI GAAGAC 4 cut(s) 90, 105, 599, 1603
Bbv12I GWGCWC 2 cut(s) 39, 1257
BbvI GCAGC 3 cut(s) 589, 1077, 1234
BccI CCATC 3 cut(s) 316, 991, 1498
BceAI ACGGC 2 cut(s) 143, 1650
BcgI CGANNNNNNTGC 4 cut(s) 747, 781, 1467, 1501
BciT130I CCWGG 1 cut(s) 271
BciVI GTATCC 1 cut(s) 539
BclI TGATCA 1 cut(s) 1797
BcnI CCSGG 2 cut(s) 1742, 1772
BcoDI GTCTC 3 cut(s) 188, 1461, 1841
BfaI CTAG 4 cut(s) 20, 392, 642, 1680
BfmI CTRYAG 3 cut(s) 526, 1248, 1618
BfuAI ACCTGC 1 cut(s) 1859
BfuI GTATCC 1 cut(s) 539
BglII AGATCT 4 cut(s) 103, 436, 733, 1422
BlpI GCTNAGC 1 cut(s) 1577
BmcAI AGTACT 1 cut(s) 942
Bme1390I CCNGG 3 cut(s) 271, 1742, 1772
Bme18I GGWCC 5 cut(s) 26, 367, 934, 1229, 1738
BmeRI GACNNNNNGTC 1 cut(s) 1330
BmeT110I CYCGRG 1 cut(s) 1256
BmgBI CACGTC 1 cut(s) 1226
BmgT120I GGNCC 5 cut(s) 26, 367, 934, 1229, 1738
BmrFI CCNGG 3 cut(s) 271, 1742, 1772
BmrI ACTGGG 1 cut(s) 1660
BmsI GCATC 1 cut(s) 758
BmuI ACTGGG 1 cut(s) 1660
BpiI GAAGAC 4 cut(s) 90, 105, 599, 1603
Bpu10I CCTNAGC 1 cut(s) 1301
Bpu1102I GCTNAGC 1 cut(s) 1577
Bpu14I TTCGAA 1 cut(s) 432
BpuEI CTTGAG 2 cut(s) 92, 281
BpuMI CCSGG 2 cut(s) 1742, 1772
Bsa29I ATCGAT 2 cut(s) 682, 767
BsaAI YACGTR 2 cut(s) 956, 1235
BsaJI CCNNGG 2 cut(s) 1291, 1409
BsaWI WCCGGW 2 cut(s) 995, 1545
BsaXI ACNNNNNCTCC 4 cut(s) 21, 51, 523, 553
Bsc4I CCNNNNNNNGG 5 cut(s) 206, 364, 1189, 1415, 1747
Bse1I ACTGG 2 cut(s) 1655, 1810
Bse21I CCTNAGG 1 cut(s) 1929
Bse3DI GCAATG 2 cut(s) 630, 1084
BseBI CCWGG 1 cut(s) 271
BseCI ATCGAT 2 cut(s) 682, 767
BseDI CCNNGG 2 cut(s) 1291, 1409
BseGI GGATG 4 cut(s) 511, 1660, 1800, 1945
BseLI CCNNNNNNNGG 5 cut(s) 206, 364, 1189, 1415, 1747
BseMI GCAATG 2 cut(s) 630, 1084
BseMII CTCAG 4 cut(s) 687, 728, 1315, 1506
BseNI ACTGG 2 cut(s) 1655, 1810
BseRI GAGGAG 2 cut(s) 1857, 1982
BseXI GCAGC 3 cut(s) 589, 1077, 1234
Bsh1285I CGRYCG 1 cut(s) 697
BshFI GGCC 4 cut(s) 158, 269, 1042, 1637
BshNI GGYRCC 1 cut(s) 660
BshVI ATCGAT 2 cut(s) 682, 767
BsiEI CGRYCG 1 cut(s) 697
BsiHKAI GWGCWC 2 cut(s) 39, 1257
BsiHKCI CYCGRG 1 cut(s) 1256
BsiSI CCGG 6 cut(s) 996, 1043, 1546, 1742, 1754, 1772
BslFI GGGAC 5 cut(s) 947, 1236, 1281, 1360, 1751
BslI CCNNNNNNNGG 5 cut(s) 206, 364, 1189, 1415, 1747
BsmAI GTCTC 3 cut(s) 188, 1461, 1841
BsmBI CGTCTC 2 cut(s) 1461, 1841
BsmFI GGGAC 5 cut(s) 947, 1236, 1281, 1360, 1751
BsmI GAATGC 2 cut(s) 1514, 1870
BsnI GGCC 4 cut(s) 158, 269, 1042, 1637
BsoBI CYCGRG 1 cut(s) 1256
Bsp119I TTCGAA 1 cut(s) 432
Bsp1286I GDGCHC 3 cut(s) 39, 1257, 1772
Bsp143I GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
Bsp1720I GCTNAGC 1 cut(s) 1577
Bsp19I CCATGG 1 cut(s) 1409
BspACI CCGC 9 cut(s) 179, 185, 188, 606, 1062, 1158, 1361, 1712, 1748
BspANI GGCC 4 cut(s) 158, 269, 1042, 1637
BspCNI CTCAG 4 cut(s) 686, 729, 1314, 1507
BspDI ATCGAT 2 cut(s) 682, 767
BspHI TCATGA 2 cut(s) 1494, 1800
BspMAI CTGCAG 1 cut(s) 1252
BspMI ACCTGC 1 cut(s) 1859
BspPI GGATC 2 cut(s) 890, 1473
BspT104I TTCGAA 1 cut(s) 432
BspT107I GGYRCC 1 cut(s) 660
BsrDI GCAATG 2 cut(s) 630, 1084
BsrI ACTGG 2 cut(s) 1655, 1810
BssECI CCNNGG 2 cut(s) 1291, 1409
BssMI GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
BssT1I CCWWGG 2 cut(s) 1291, 1409
Bst2UI CCWGG 1 cut(s) 271
Bst4CI ACNGT 4 cut(s) 1318, 1708, 1833, 1952
Bst6I CTCTTC 1 cut(s) 258
BstAPI GCANNNNNTGC 2 cut(s) 755, 1010
BstBAI YACGTR 2 cut(s) 956, 1235
BstBI TTCGAA 1 cut(s) 432
BstC8I GCNNGC 2 cut(s) 536, 1298
BstDEI CTNAG 8 cut(s) 314, 673, 737, 1301, 1515, 1577, 1733, 1929
BstDSI CCRYGG 1 cut(s) 1409
BstF5I GGATG 4 cut(s) 511, 1660, 1800, 1945
BstKTI GATC 9 cut(s) 106, 439, 697, 736, 898, 1425, 1474, 1481, 1800
BstMAI GTCTC 3 cut(s) 188, 1461, 1841
BstMBI GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
BstMCI CGRYCG 1 cut(s) 697
BstMWI GCNNNNNNNGC 9 cut(s) 43, 184, 187, 244, 614, 647, 755, 1010, 1158
BstNI CCWGG 1 cut(s) 271
BstNSI RCATGY 1 cut(s) 1138
BstSCI CCNGG 3 cut(s) 269, 1740, 1770
BstSFI CTRYAG 3 cut(s) 526, 1248, 1618
BstV1I GCAGC 3 cut(s) 589, 1077, 1234
BstV2I GAAGAC 4 cut(s) 90, 105, 599, 1603
BstX2I RGATCY 5 cut(s) 103, 436, 733, 895, 1422
BstYI RGATCY 5 cut(s) 103, 436, 733, 895, 1422
Bsu15I ATCGAT 2 cut(s) 682, 767
Bsu36I CCTNAGG 1 cut(s) 1929
BsuI GTATCC 1 cut(s) 539
BsuRI GGCC 4 cut(s) 158, 269, 1042, 1637
BsuTUI ATCGAT 2 cut(s) 682, 767
BtgI CCRYGG 1 cut(s) 1409
BtrI CACGTC 1 cut(s) 1226
BtsCI GGATG 4 cut(s) 511, 1660, 1800, 1945
BtsIMutI CAGTG 2 cut(s) 168, 1512
BveI ACCTGC 1 cut(s) 1859
Cac8I GCNNGC 2 cut(s) 536, 1298
CciI TCATGA 2 cut(s) 1494, 1800
Cfr13I GGNCC 5 cut(s) 26, 367, 934, 1229, 1738
ClaI ATCGAT 2 cut(s) 682, 767
Csp6I GTAC 5 cut(s) 205, 661, 880, 941, 1904
CviAII CATG 8 cut(s) 406, 1090, 1135, 1327, 1339, 1410, 1495, 1801
CviQI GTAC 5 cut(s) 205, 661, 880, 941, 1904
DdeI CTNAG 8 cut(s) 314, 673, 737, 1301, 1515, 1577, 1733, 1929
DpnI GATC 9 cut(s) 105, 438, 696, 735, 897, 1424, 1473, 1480, 1799
DpnII GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
DraIII CACNNNGTG 1 cut(s) 1238
DriI GACNNNNNGTC 1 cut(s) 1330
Eam1104I CTCTTC 1 cut(s) 258
Eam1105I GACNNNNNGTC 1 cut(s) 1330
EarI CTCTTC 1 cut(s) 258
Ecl136II GAGCTC 2 cut(s) 37, 1255
Eco130I CCWWGG 2 cut(s) 1291, 1409
Eco147I AGGCCT 1 cut(s) 269
Eco24I GRGCYC 3 cut(s) 39, 1257, 1772
Eco32I GATATC 1 cut(s) 702
Eco47I GGWCC 5 cut(s) 26, 367, 934, 1229, 1738
Eco53kI GAGCTC 2 cut(s) 37, 1255
Eco72I CACGTG 1 cut(s) 1235
Eco81I CCTNAGG 1 cut(s) 1929
Eco88I CYCGRG 1 cut(s) 1256
EcoICRI GAGCTC 2 cut(s) 37, 1255
EcoO109I RGGNCCY 1 cut(s) 1738
EcoRII CCWGG 1 cut(s) 269
EcoRV GATATC 1 cut(s) 702
EcoT14I CCWWGG 2 cut(s) 1291, 1409
EcoT38I GRGCYC 3 cut(s) 39, 1257, 1772
ErhI CCWWGG 2 cut(s) 1291, 1409
Esp3I CGTCTC 2 cut(s) 1461, 1841
FaeI CATG 8 cut(s) 409, 1093, 1138, 1330, 1342, 1413, 1498, 1804
FalI AAGNNNNNCTT 2 cut(s) 763, 795
FaqI GGGAC 5 cut(s) 947, 1236, 1281, 1360, 1751
FatI CATG 8 cut(s) 405, 1089, 1134, 1326, 1338, 1409, 1494, 1800
FbaI TGATCA 1 cut(s) 1797
FblI GTMKAC 1 cut(s) 1131
FokI GGATG 4 cut(s) 518, 1667, 1807, 1952
FriOI GRGCYC 3 cut(s) 39, 1257, 1772
FspBI CTAG 4 cut(s) 20, 392, 642, 1680
HaeIII GGCC 4 cut(s) 158, 269, 1042, 1637
HapII CCGG 6 cut(s) 996, 1043, 1546, 1742, 1754, 1772
Hin1II CATG 8 cut(s) 409, 1093, 1138, 1330, 1342, 1413, 1498, 1804
HincII GTYRAC 2 cut(s) 1132, 1525
HindII GTYRAC 2 cut(s) 1132, 1525
HindIII AAGCTT 2 cut(s) 275, 1671
HpaI GTTAAC 1 cut(s) 1525
HpaII CCGG 6 cut(s) 996, 1043, 1546, 1742, 1754, 1772
HphI GGTGA 8 cut(s) 280, 985, 1104, 1172, 1250, 1606, 1786, 1924
Hpy166II GTNNAC 5 cut(s) 29, 370, 1132, 1229, 1525
Hpy188I TCNGA 9 cut(s) 399, 676, 699, 706, 733, 738, 1393, 1841, 1875
Hpy188III TCNNGA 7 cut(s) 298, 1016, 1303, 1495, 1801, 1857, 1962
Hpy8I GTNNAC 5 cut(s) 29, 370, 1132, 1229, 1525
Hpy99I CGWCG 1 cut(s) 587
HpyCH4III ACNGT 4 cut(s) 1318, 1708, 1833, 1952
HpyCH4IV ACGT 3 cut(s) 955, 1225, 1234
HpyF10VI GCNNNNNNNGC 9 cut(s) 43, 184, 187, 244, 614, 647, 755, 1010, 1158
HpyF3I CTNAG 8 cut(s) 314, 673, 737, 1301, 1515, 1577, 1733, 1929
HpySE526I ACGT 3 cut(s) 955, 1225, 1234
Hsp92II CATG 8 cut(s) 409, 1093, 1138, 1330, 1342, 1413, 1498, 1804
KflI GGGWCCC 1 cut(s) 1738
KpnI GGTACC 1 cut(s) 664
Ksp22I TGATCA 1 cut(s) 1797
KspAI GTTAAC 1 cut(s) 1525
Kzo9I GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
Lsp1109I GCAGC 3 cut(s) 589, 1077, 1234
LweI GCATC 1 cut(s) 758
MaeI CTAG 4 cut(s) 20, 392, 642, 1680
MaeII ACGT 3 cut(s) 955, 1225, 1234
MaeIII GTNAC 5 cut(s) 162, 1312, 1322, 1630, 1682
MalI GATC 9 cut(s) 105, 438, 696, 735, 897, 1424, 1473, 1480, 1799
MboI GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
MfeI CAATTG 2 cut(s) 798, 987
MflI RGATCY 5 cut(s) 103, 436, 733, 895, 1422
MhlI GDGCHC 3 cut(s) 39, 1257, 1772
MlyI GAGTC 5 cut(s) 190, 275, 464, 665, 1055
MmeI TCCRAC 2 cut(s) 423, 1853
MroXI GAANNNNTTC 2 cut(s) 854, 1034
MseI TTAA 6 cut(s) 128, 762, 1148, 1203, 1524, 1899
MspI CCGG 6 cut(s) 996, 1043, 1546, 1742, 1754, 1772
MspR9I CCNGG 3 cut(s) 271, 1742, 1772
MunI CAATTG 2 cut(s) 798, 987
Mva1269I GAATGC 2 cut(s) 1514, 1870
MvaI CCWGG 1 cut(s) 271
MwoI GCNNNNNNNGC 9 cut(s) 43, 184, 187, 244, 614, 647, 755, 1010, 1158
NciI CCSGG 2 cut(s) 1742, 1772
NcoI CCATGG 1 cut(s) 1409
NdeII GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
NlaIII CATG 8 cut(s) 409, 1093, 1138, 1330, 1342, 1413, 1498, 1804
NmuCI GTSAC 3 cut(s) 162, 1322, 1630
NspI RCATGY 1 cut(s) 1138
NspV TTCGAA 1 cut(s) 432
PaeR7I CTCGAG 1 cut(s) 1256
PagI TCATGA 2 cut(s) 1494, 1800
PceI AGGCCT 1 cut(s) 269
PciI ACATGT 1 cut(s) 1134
PcsI WCGNNNNNNNCGW 1 cut(s) 1231
PctI GAATGC 2 cut(s) 1514, 1870
PdmI GAANNNNTTC 2 cut(s) 854, 1034
PfeI GAWTC 5 cut(s) 684, 803, 1729, 1853, 1978
PflMI CCANNNNNTGG 1 cut(s) 1189
Ple19I CGATCG 1 cut(s) 697
PleI GAGTC 5 cut(s) 190, 275, 464, 665, 1054
PmaCI CACGTG 1 cut(s) 1235
PmlI CACGTG 1 cut(s) 1235
PpsI GAGTC 5 cut(s) 190, 275, 464, 665, 1054
Ppu21I YACGTR 2 cut(s) 956, 1235
PpuMI RGGWCCY 1 cut(s) 1738
PscI ACATGT 1 cut(s) 1134
Psp124BI GAGCTC 2 cut(s) 39, 1257
Psp5II RGGWCCY 1 cut(s) 1738
Psp6I CCWGG 1 cut(s) 269
PspCI CACGTG 1 cut(s) 1235
PspGI CCWGG 1 cut(s) 269
PspPI GGNCC 5 cut(s) 26, 367, 934, 1229, 1738
PspPPI RGGWCCY 1 cut(s) 1738
PspXI VCTCGAGB 1 cut(s) 1256
PstI CTGCAG 1 cut(s) 1252
PsuI RGATCY 5 cut(s) 103, 436, 733, 895, 1422
PvuI CGATCG 1 cut(s) 697
RsaI GTAC 5 cut(s) 206, 662, 881, 942, 1905
RsaNI GTAC 5 cut(s) 205, 661, 880, 941, 1904
SacI GAGCTC 2 cut(s) 39, 1257
SalI GTCGAC 1 cut(s) 1130
SaqAI TTAA 6 cut(s) 128, 762, 1148, 1203, 1524, 1899
Sau3AI GATC 9 cut(s) 103, 436, 694, 733, 895, 1422, 1471, 1478, 1797
Sau96I GGNCC 5 cut(s) 26, 367, 934, 1229, 1738
ScaI AGTACT 1 cut(s) 942
SchI GAGTC 5 cut(s) 190, 275, 464, 665, 1055
ScrFI CCNGG 3 cut(s) 271, 1742, 1772
SduI GDGCHC 3 cut(s) 39, 1257, 1772
SfaNI GCATC 1 cut(s) 758
SfcI CTRYAG 3 cut(s) 526, 1248, 1618
Sfr274I CTCGAG 1 cut(s) 1256
SfuI TTCGAA 1 cut(s) 432
SinI GGWCC 5 cut(s) 26, 367, 934, 1229, 1738
SlaI CTCGAG 1 cut(s) 1256
SmlI CTYRAG 3 cut(s) 107, 296, 1256
SmoI CTYRAG 3 cut(s) 107, 296, 1256
SseBI AGGCCT 1 cut(s) 269
SsiI CCGC 9 cut(s) 179, 185, 188, 606, 1062, 1158, 1361, 1712, 1748
SspMI CTAG 4 cut(s) 20, 392, 642, 1680
SstI GAGCTC 2 cut(s) 39, 1257
StuI AGGCCT 1 cut(s) 269
StyD4I CCNGG 3 cut(s) 269, 1740, 1770
StyI CCWWGG 2 cut(s) 1291, 1409
TaaI ACNGT 4 cut(s) 1318, 1708, 1833, 1952
TaiI ACGT 3 cut(s) 958, 1228, 1237
TaqI TCGA 9 cut(s) 432, 682, 767, 1101, 1131, 1257, 1334, 1477, 1856
TatI WGTACW 3 cut(s) 879, 940, 1903
TauI GCSGC 7 cut(s) 181, 190, 608, 1065, 1161, 1364, 1714
TfiI GAWTC 5 cut(s) 684, 803, 1729, 1853, 1978
Tru1I TTAA 6 cut(s) 128, 762, 1148, 1203, 1524, 1899
Tru9I TTAA 6 cut(s) 128, 762, 1148, 1203, 1524, 1899
TscAI CASTG 2 cut(s) 175, 1519
TseFI GTSAC 3 cut(s) 162, 1322, 1630
TseI GCWGC 3 cut(s) 602, 1065, 1247
Tsp45I GTSAC 3 cut(s) 162, 1322, 1630
TspGWI ACGGA 2 cut(s) 222, 1865
TspRI CASTG 2 cut(s) 175, 1519
Van91I CCANNNNNTGG 1 cut(s) 1189
VpaK11BI GGWCC 5 cut(s) 26, 367, 934, 1229, 1738
XapI RAATTY 4 cut(s) 143, 447, 1144, 1439
XceI RCATGY 1 cut(s) 1138
XhoI CTCGAG 1 cut(s) 1256
XmiI GTMKAC 1 cut(s) 1131
XmnI GAANNNNTTC 2 cut(s) 854, 1034
XspI CTAG 4 cut(s) 20, 392, 642, 1680
ZrmI AGTACT 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.