FvH4_3g14971

CRAL/TRIO, N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001644
Physical Location & Seq
Reverse (-)
9284345 .. 9288008
3664 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14971.t1

Sequence Viewer

Length: 2988 bp
ATGGCAACAGGAGAACATGTAGAAGATCCTCTGAAAGATAAAGCAGCTGATCGTGAAGAACATATCAAAGACAAAGATAATGCATTAAAGGATGTCAACCATGTAGGGAAAGCTGACGATTTTATAAAAACCAATGACCCTGTAACAACCGAAGCATCAATGGTTGAAGAGGACAATAAGAAGATTGAAGCTAAAATAAAAGAGATTGGTGTGGAGAACAAGAGAAAAGAAGACAATGAAACAGAGAAAAAGAAAGATGAGGCAACCATTGCAACAAAAGGAAAGTTACAAGAGGCCCAGAAGGATATAGGTGTAATTGATGAGGCGGTGAAACCAGGGGAGGTTGTGGAGGGGAACAAGGTAAAAGAAGCTAATAAAACAGAGAAGAAGAAAGATGAGGTTGTGAAGGCCGATGATTCTAAATATAAAAAAGCTGAGGAAAGTTTGTCCATGGCAACAAAAGAAAACCTAAAACAAGCCCAGGAGAAAAGAGATACAGCTGAAGAAGTGGTAAAAGACGAGAACAAGAAAATCGAAGCGCAACCGAGGGAGATTGTGGTGGTAGAGAATAAGGGAAAACAAGCTGATCAAACAGAAATGAAGAAAGATGGGATTGAAAAGGCTGATGCTCCTAAGAATACAAAAGTTGAGAAAATATCATCCATAGAAACAAAAGAAAAGTTAGAAGAGGCCCAAAAGCATACAGGTGCAGTTAAAGAGACGGGGAAAGAGGAGGGCAAGAAGATTGAAGCGAAACCAAGAGAGATTGTGGTAGAGAACAAGAAAACAGAAGCTGATAAAACAGAGAAGAAAAAGGATGAGGTCGAAAAGACCGATGCCTCCAATTATATCAGAGATGAGAAAAGTTCATCCATGACAACAAAAGTTAAGGTAGAAGATGCCTCAAAGAATGAGGTAGTGAAAGAGGAGAAGAATAAGACTGGAGCGGAACAACGGGAGATTGTGGTGGATAACAAGGGAAAACAAGATTATACCAAAAGTGAGAAGAATTCATCTATGGCAACAAAAGAAAATCAAAACGAGGCCCAGAATGATAAGGGTGTAGTTGAAGGGGTGGTGAAAGATGACAAGAAGAAGAATGAAGCGGAACCTAGGGAGAACGTGGTAGAGAACAAGGGAAAAGAAGTTGATAAAACGGAGAAAAAGAAAGATGGGGTTGAAAATGTCGATGATTCCAAACGTACAAAAGTTGAGGAACGTCCATCGATGGCAACAAAAGAAAATCTAGAAGAAGCCCAGAAAGATAAGGGTGTAGTTGAAGGGGTGGTGAAGAATATGACAAAGAAGATTGAAGAAACACCAAGGGAGAATGTGGTCGAGAACAAAGGAAAGGAAGTTGACCAAACAAAGAATAAGAAACATGAGGTTGAAAAAGCTTATGCTTACAAATGTACAGAACTTGAGAAAAGTTCATCTATGGCAACAGAAGAAAAATTAGAAGAGGAATTAAAGGATAAAGGGGGTATAATTGAAGAGGTGGTTCATAAGAAGGAGAAGAATAAGATCAAAGCGGAACCAATAGAGATAGTGGTGGAGAATAAGTTGAAAGAAGAAACTACAAACGAGGTGGGTTTGAAAGAGGAGAAGGAAAATGATCAGGTTGGAAATGCAGATGTTTCTGAATCTGGTGAAGTTGATAAATGTTCATCATTAAGGGAAGAAATAAACTCTCTTTTAGAATTAAACGAGCAAGAGAAGAAAGCATTGGCAGAGTTGAGATCAAAAATTGAAAAGGCGATACATGAAAATCATTTGTTAAAGGTAGATAAGGACCAAGCTGCGAATGAAATGAAGCAAGAGAAGGAAACATCTCAAGAAGTAGATGACGTTGAAGCTAAGCAAGAAGGTGAGGAAGATGAGAAAAAAGCAGAATCAAACGAGAACAACAAAGATGTGGCTAAAGTTCATTCCAACATCAACAAAGATATTGCAATTTGGGGAGTACCCTTATTACCTAGTAAAGAAGATAATGCCACTAATGTCATATTATTGAAATTTTTGAAGGCCAAGGACTTTGAGGTCAATGATGCTTTCGAGATGTTAAGGAATACGCTCAAATGGAGGAATGACAACAACATAGATTCGATACTAGATGAGAACTTTGATGAGGATCTTGGTTCCATAAGTATCATGGATGGTGTCAGTCGTGAGGGACACCCAGTTCATTATAGCTCTTTTAAACTGTTTGGGAATGAAGAGTTATACAACAAGGTACTAGGGACTGAAGAGAAGCGCAACGTGTTTATAAGGTCTAGAATTCAACTAATGGAAAGAGCAATTCAGAAGCTCGACTTCAAGTCTGGTGGTGTGTCTTCAATATTCCTCGTCAATGATTGCAAGGATATGCCTGGTCCATCTAAGAAGGAGCTTCGAATTGCTTTGAAACAAATCCTTACTCTTCATCAGGACAATTATCCTGAATTCGTTGCAAGACATATCTTCATCAATGTTCCTTTTTGGTACTATGCCTTCAGTGCTAGCACTTTCCTATCACCATTTTTGACCCCAAAATCCAATAGCAAGTTCATCTTTGCTCGGCCGGCTAAAGTCAACGACGTTTTGCTCCAGTACATAGCTTTAGAGGAACTACCAGTTCATTATGGTGGCTTCAGAAAGGAAAACGATCCTGATTTCTCAACCGAAGATGATATCTCAGAGATCTTTCTCAATCAATCATCAACAGAAATTATCCGTATCCCAATGCAGGCAGGAGTGAGTTTAATGTGGGAAGTACTAGTGTCTGGTTGGGAAGTGAACTACAAGGAAGAATTTATCCCAACGGATGACAGCTCATATAGCGTTATTATACAGAGGAGGAAGAAGATCAGCGGGCATGAGGGTCCAATCCGAAACTCTTTCACATGCAAGGAGCCTGGAAACATTGTGTTAACAATCGAAAATGGAGCATTAATCAAGAAGAAACGAATCTGTTACCGATACAAGATGATGAATCGGAGTTCCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRAL_TRIO CRAL_TRIO_N

Protein Analysis

996

Amino Acids

113.11

Weight (kDa)

5.34

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 635 - 690 6.4e-07 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 716 - 876 9.3e-20 CRAL/TRIO domain
GOLD_PATL1_C PF25099 898 - 980 9.7e-29 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 125, 2267
AasI GACNNNNNNGTC 1 cut(s) 2039
AccBSI CCGCTC 1 cut(s) 947
AciI CCGC 5 cut(s) 326, 947, 1106, 1532, 2850
AclWI GGATC 3 cut(s) 20, 2139, 2639
AcoI YGGCCR 1 cut(s) 2558
AcsI RAATTY 5 cut(s) 1009, 2015, 2277, 2441, 2789
AcuI CTGAAG 4 cut(s) 522, 2265, 2476, 2614
AfaI GTAC 7 cut(s) 1204, 1414, 1965, 2235, 2483, 2591, 2754
AfiI CCNNNNNNNGG 1 cut(s) 2725
AflIII ACRYGT 2 cut(s) 16, 2259
AhdI GACNNNNNGTC 1 cut(s) 2317
AhlI ACTAGT 1 cut(s) 2755
AjnI CCWGG 4 cut(s) 334, 480, 2368, 2893
AjuI GAANNNNNNNTTGG 4 cut(s) 1709, 1741, 2528, 2560
AloI GAACNNNNNNTCC 2 cut(s) 2166, 2198
Alw26I GTCTC 1 cut(s) 713
AlwI GGATC 3 cut(s) 20, 2139, 2639
AlwNI CAGNNNCTG 1 cut(s) 794
AoxI GGCC 6 cut(s) 294, 408, 690, 1044, 2025, 2558
ApeKI GCWGC 2 cut(s) 44, 1799
ApoI RAATTY 5 cut(s) 1009, 2015, 2277, 2441, 2789
AseI ATTAAT 1 cut(s) 2930
AspA2I CCTAGG 1 cut(s) 1112
AspLEI GCGC 2 cut(s) 541, 2256
AspS9I GGNCC 6 cut(s) 295, 691, 1045, 1792, 2372, 2861
AsuHPI GGTGA 6 cut(s) 340, 1090, 1300, 1661, 1880, 2505
AsuII TTCGAA 1 cut(s) 2392
AsuNHI GCTAGC 1 cut(s) 2498
AvaII GGWCC 3 cut(s) 1792, 2372, 2861
AvrII CCTAGG 1 cut(s) 1112
BarI GAAGNNNNNNTAC 2 cut(s) 2474, 2506
BbsI GAAGAC 2 cut(s) 237, 2325
BbvCI CCTCAGC 1 cut(s) 435
BbvI GCAGC 2 cut(s) 56, 1786
BccI CCATC 6 cut(s) 602, 1166, 1222, 1231, 2150, 2383
BciT130I CCWGG 4 cut(s) 336, 482, 2370, 2895
BciVI GTATCC 1 cut(s) 2726
BclI TGATCA 2 cut(s) 586, 1615
BcoDI GTCTC 1 cut(s) 713
BcuI ACTAGT 1 cut(s) 2755
BfaI CTAG 8 cut(s) 1113, 1247, 1977, 2111, 2237, 2274, 2499, 2756
BfuI GTATCC 1 cut(s) 2726
BglII AGATCT 1 cut(s) 2679
BisI GCNGC 2 cut(s) 45, 1800
BlnI CCTAGG 1 cut(s) 1112
BlpI GCTNAGC 1 cut(s) 1857
BlsI GCNGC 2 cut(s) 46, 1801
BmcAI AGTACT 1 cut(s) 2754
Bme1390I CCNGG 4 cut(s) 336, 482, 2370, 2895
Bme18I GGWCC 3 cut(s) 1792, 2372, 2861
BmeRI GACNNNNNGTC 1 cut(s) 2317
BmgT120I GGNCC 6 cut(s) 295, 691, 1045, 1792, 2372, 2861
BmiI GGNNCC 5 cut(s) 1110, 1536, 2140, 2862, 2892
BmrFI CCNGG 4 cut(s) 336, 482, 2370, 2895
BmrI ACTGGG 1 cut(s) 2174
BmsI GCATC 5 cut(s) 164, 616, 826, 889, 2038
BmtI GCTAGC 1 cut(s) 2502
BmuI ACTGGG 1 cut(s) 2174
BpiI GAAGAC 2 cut(s) 237, 2325
BpmI CTGGAG 2 cut(s) 963, 2570
Bpu10I CCTNAGC 1 cut(s) 435
Bpu1102I GCTNAGC 1 cut(s) 1857
Bpu14I TTCGAA 1 cut(s) 2392
BpuEI CTTGAG 2 cut(s) 1442, 1818
Bsa29I ATCGAT 1 cut(s) 1226
BsaBI GATNNNNATC 1 cut(s) 2130
BsaJI CCNNGG 7 cut(s) 335, 450, 480, 545, 1112, 1322, 2028
BsaXI ACNNNNNCTCC 3 cut(s) 33, 1547, 1577
Bsc4I CCNNNNNNNGG 1 cut(s) 2725
Bse118I RCCGGY 1 cut(s) 2560
Bse1I ACTGG 4 cut(s) 946, 2180, 2587, 2612
Bse3DI GCAATG 1 cut(s) 267
Bse8I GATNNNNATC 1 cut(s) 2130
BseBI CCWGG 4 cut(s) 336, 482, 2370, 2895
BseCI ATCGAT 1 cut(s) 1226
BseDI CCNNGG 7 cut(s) 335, 450, 480, 545, 1112, 1322, 2028
BseGI GGATG 6 cut(s) 97, 659, 823, 869, 2161, 2809
BseJI GATNNNNATC 1 cut(s) 2130
BseLI CCNNNNNNNGG 1 cut(s) 2725
BseMI GCAATG 1 cut(s) 267
BseMII CTCAG 2 cut(s) 426, 2688
BseNI ACTGG 4 cut(s) 946, 2180, 2587, 2612
BseRI GAGGAG 4 cut(s) 746, 941, 1616, 2848
BseX3I CGGCCG 1 cut(s) 2558
BseXI GCAGC 2 cut(s) 56, 1786
BsgI GTGCAG 1 cut(s) 729
Bsh1285I CGRYCG 1 cut(s) 2561
BshFI GGCC 6 cut(s) 296, 410, 692, 1046, 2027, 2560
BshVI ATCGAT 1 cut(s) 1226
BsiEI CGRYCG 1 cut(s) 2561
BsiSI CCGG 1 cut(s) 2561
BslFI GGGAC 2 cut(s) 2187, 2254
BslI CCNNNNNNNGG 1 cut(s) 2725
BsmAI GTCTC 1 cut(s) 713
BsmBI CGTCTC 1 cut(s) 713
BsmFI GGGAC 2 cut(s) 2187, 2254
BsnI GGCC 6 cut(s) 296, 410, 692, 1046, 2027, 2560
Bsp119I TTCGAA 1 cut(s) 2392
Bsp1407I TGTACA 1 cut(s) 1412
Bsp1720I GCTNAGC 1 cut(s) 1857
Bsp19I CCATGG 1 cut(s) 450
BspACI CCGC 5 cut(s) 326, 947, 1106, 1532, 2850
BspANI GGCC 6 cut(s) 296, 410, 692, 1046, 2027, 2560
BspCNI CTCAG 2 cut(s) 427, 2687
BspDI ATCGAT 1 cut(s) 1226
BspLI GGNNCC 5 cut(s) 1110, 1536, 2140, 2862, 2892
BspOI GCTAGC 1 cut(s) 2502
BspPI GGATC 3 cut(s) 20, 2139, 2639
BspT104I TTCGAA 1 cut(s) 2392
BsrBI CCGCTC 1 cut(s) 947
BsrDI GCAATG 1 cut(s) 267
BsrFI RCCGGY 1 cut(s) 2560
BsrGI TGTACA 1 cut(s) 1412
BsrI ACTGG 4 cut(s) 946, 2180, 2587, 2612
BssAI RCCGGY 1 cut(s) 2560
BssECI CCNNGG 7 cut(s) 335, 450, 480, 545, 1112, 1322, 2028
BssT1I CCWWGG 4 cut(s) 450, 1112, 1322, 2028
Bst2UI CCWGG 4 cut(s) 336, 482, 2370, 2895
Bst4CI ACNGT 1 cut(s) 2205
Bst6I CTCTTC 7 cut(s) 162, 681, 1455, 1488, 2211, 2241, 2424
BstAPI GCANNNNNTGC 1 cut(s) 269
BstAUI TGTACA 1 cut(s) 1412
BstBI TTCGAA 1 cut(s) 2392
BstC8I GCNNGC 4 cut(s) 2500, 2562, 2727, 2852
BstDEI CTNAG 5 cut(s) 435, 633, 1857, 2379, 2674
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 6 cut(s) 97, 659, 823, 869, 2161, 2809
BstHHI GCGC 2 cut(s) 541, 2256
BstMAI GTCTC 1 cut(s) 713
BstMCI CGRYCG 1 cut(s) 2561
BstMWI GCNNNNNNNGC 4 cut(s) 269, 2495, 2561, 2817
BstNI CCWGG 4 cut(s) 336, 482, 2370, 2895
BstNSI RCATGY 2 cut(s) 20, 2886
BstSCI CCNGG 4 cut(s) 334, 480, 2368, 2893
BstV1I GCAGC 2 cut(s) 56, 1786
BstV2I GAAGAC 2 cut(s) 237, 2325
BstX2I RGATCY 3 cut(s) 25, 2131, 2679
BstYI RGATCY 3 cut(s) 25, 2131, 2679
BstZI CGGCCG 1 cut(s) 2558
Bsu15I ATCGAT 1 cut(s) 1226
BsuI GTATCC 1 cut(s) 2726
BsuRI GGCC 6 cut(s) 296, 410, 692, 1046, 2027, 2560
BsuTUI ATCGAT 1 cut(s) 1226
BtgI CCRYGG 1 cut(s) 450
BtsCI GGATG 6 cut(s) 97, 659, 823, 869, 2161, 2809
BtsIMutI CAGTG 1 cut(s) 2500
Cac8I GCNNGC 4 cut(s) 2500, 2562, 2727, 2852
CaiI CAGNNNCTG 1 cut(s) 794
CfoI GCGC 2 cut(s) 541, 2256
Cfr10I RCCGGY 1 cut(s) 2560
Cfr13I GGNCC 6 cut(s) 295, 691, 1045, 1792, 2372, 2861
ClaI ATCGAT 1 cut(s) 1226
Csp6I GTAC 7 cut(s) 1203, 1413, 1964, 2234, 2482, 2590, 2753
CspCI CAANNNNNGTGG 4 cut(s) 1569, 1604, 2305, 2340
CviAII CATG 9 cut(s) 17, 101, 451, 874, 1382, 1763, 2152, 2855, 2883
CviQI GTAC 7 cut(s) 1203, 1413, 1964, 2234, 2482, 2590, 2753
DdeI CTNAG 5 cut(s) 435, 633, 1857, 2379, 2674
DraI TTTAAA 1 cut(s) 2200
DrdI GACNNNNNNGTC 1 cut(s) 2039
DriI GACNNNNNGTC 1 cut(s) 2317
DseDI GACNNNNNNGTC 1 cut(s) 2039
EaeI YGGCCR 1 cut(s) 2558
EagI CGGCCG 1 cut(s) 2558
Eam1104I CTCTTC 7 cut(s) 162, 681, 1455, 1488, 2211, 2241, 2424
Eam1105I GACNNNNNGTC 1 cut(s) 2317
EarI CTCTTC 7 cut(s) 162, 681, 1455, 1488, 2211, 2241, 2424
EclXI CGGCCG 1 cut(s) 2558
Eco130I CCWWGG 4 cut(s) 450, 1112, 1322, 2028
Eco32I GATATC 1 cut(s) 2671
Eco47I GGWCC 3 cut(s) 1792, 2372, 2861
Eco52I CGGCCG 1 cut(s) 2558
Eco57I CTGAAG 4 cut(s) 522, 2265, 2476, 2614
EcoRI GAATTC 3 cut(s) 1009, 2277, 2441
EcoRII CCWGG 4 cut(s) 334, 480, 2368, 2893
EcoRV GATATC 1 cut(s) 2671
EcoT14I CCWWGG 4 cut(s) 450, 1112, 1322, 2028
EcoT22I ATGCAT 1 cut(s) 85
ErhI CCWWGG 4 cut(s) 450, 1112, 1322, 2028
Esp3I CGTCTC 1 cut(s) 713
FaeI CATG 9 cut(s) 20, 104, 454, 877, 1385, 1766, 2155, 2858, 2886
FalI AAGNNNNNCTT 4 cut(s) 2297, 2329, 2534, 2566
FaqI GGGAC 2 cut(s) 2187, 2254
FatI CATG 9 cut(s) 16, 100, 450, 873, 1381, 1762, 2151, 2854, 2882
FauI CCCGC 1 cut(s) 2843
FbaI TGATCA 2 cut(s) 586, 1615
Fnu4HI GCNGC 2 cut(s) 45, 1800
FokI GGATG 6 cut(s) 104, 646, 830, 856, 2168, 2816
Fsp4HI GCNGC 2 cut(s) 45, 1800
FspBI CTAG 8 cut(s) 1113, 1247, 1977, 2111, 2237, 2274, 2499, 2756
GlaI GCGC 2 cut(s) 540, 2255
GluI GCNGC 2 cut(s) 45, 1800
GsuI CTGGAG 2 cut(s) 963, 2570
HaeIII GGCC 6 cut(s) 296, 410, 692, 1046, 2027, 2560
HapII CCGG 1 cut(s) 2561
HhaI GCGC 2 cut(s) 541, 2256
Hin1II CATG 9 cut(s) 20, 104, 454, 877, 1385, 1766, 2155, 2858, 2886
Hin6I GCGC 2 cut(s) 539, 2254
HinP1I GCGC 2 cut(s) 539, 2254
HincII GTYRAC 4 cut(s) 97, 1360, 2572, 2910
HindII GTYRAC 4 cut(s) 97, 1360, 2572, 2910
HindIII AAGCTT 1 cut(s) 1395
HinfI GANTC 7 cut(s) 416, 1193, 1643, 1892, 2102, 2946, 2971
HpaI GTTAAC 1 cut(s) 2910
HpaII CCGG 1 cut(s) 2561
HphI GGTGA 6 cut(s) 340, 1090, 1300, 1661, 1880, 2505
Hpy166II GTNNAC 5 cut(s) 97, 1360, 2572, 2776, 2910
Hpy188I TCNGA 8 cut(s) 33, 854, 1642, 2304, 2633, 2677, 2870, 2976
Hpy8I GTNNAC 5 cut(s) 97, 1360, 2572, 2776, 2910
Hpy99I CGWCG 1 cut(s) 2579
HpyCH4III ACNGT 1 cut(s) 2205
HpyCH4IV ACGT 6 cut(s) 1122, 1201, 1219, 1848, 2259, 2577
HpyCH4V TGCA 9 cut(s) 83, 272, 710, 1631, 1952, 2358, 2450, 2725, 2886
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 2495, 2561, 2817
HpyF3I CTNAG 5 cut(s) 435, 633, 1857, 2379, 2674
HpySE526I ACGT 6 cut(s) 1122, 1201, 1219, 1848, 2259, 2577
Hsp92II CATG 9 cut(s) 20, 104, 454, 877, 1385, 1766, 2155, 2858, 2886
HspAI GCGC 2 cut(s) 539, 2254
KroI GCCGGC 1 cut(s) 2560
KroNI GCCGGC 1 cut(s) 2562
Ksp22I TGATCA 2 cut(s) 586, 1615
KspAI GTTAAC 1 cut(s) 2910
LmnI GCTCC 6 cut(s) 634, 944, 2386, 2589, 2890, 2924
Lsp1109I GCAGC 2 cut(s) 56, 1786
LweI GCATC 5 cut(s) 164, 616, 826, 889, 2038
MaeI CTAG 8 cut(s) 1113, 1247, 1977, 2111, 2237, 2274, 2499, 2756
MaeII ACGT 6 cut(s) 1122, 1201, 1219, 1848, 2259, 2577
MaeIII GTNAC 3 cut(s) 142, 285, 2951
MbiI CCGCTC 1 cut(s) 947
MflI RGATCY 3 cut(s) 25, 2131, 2679
MmeI TCCRAC 2 cut(s) 1603, 1956
Mph1103I ATGCAT 1 cut(s) 85
MroNI GCCGGC 1 cut(s) 2560
MslI CAYNNNNRTG 2 cut(s) 705, 2622
MspA1I CMGCKG 3 cut(s) 47, 500, 2850
MspI CCGG 1 cut(s) 2561
MspR9I CCNGG 4 cut(s) 336, 482, 2370, 2895
MvaI CCWGG 4 cut(s) 336, 482, 2370, 2895
MwoI GCNNNNNNNGC 4 cut(s) 269, 2495, 2561, 2817
NaeI GCCGGC 1 cut(s) 2562
NcoI CCATGG 1 cut(s) 450
NgoMIV GCCGGC 1 cut(s) 2560
NheI GCTAGC 1 cut(s) 2498
NlaIII CATG 9 cut(s) 20, 104, 454, 877, 1385, 1766, 2155, 2858, 2886
NlaIV GGNNCC 5 cut(s) 1110, 1536, 2140, 2862, 2892
NmeAIII GCCGAG 1 cut(s) 2536
NsiI ATGCAT 1 cut(s) 85
NspI RCATGY 2 cut(s) 20, 2886
NspV TTCGAA 1 cut(s) 2392
PciI ACATGT 1 cut(s) 16
PcsI WCGNNNNNNNCGW 1 cut(s) 831
PdiI GCCGGC 1 cut(s) 2562
PfeI GAWTC 7 cut(s) 416, 1193, 1643, 1892, 2102, 2946, 2971
PkrI GCNGC 2 cut(s) 46, 1801
PscI ACATGT 1 cut(s) 16
PshBI ATTAAT 1 cut(s) 2930
PsiI TTATAA 2 cut(s) 125, 2267
Psp6I CCWGG 4 cut(s) 334, 480, 2368, 2893
PspGI CCWGG 4 cut(s) 334, 480, 2368, 2893
PspN4I GGNNCC 5 cut(s) 1110, 1536, 2140, 2862, 2892
PspPI GGNCC 6 cut(s) 295, 691, 1045, 1792, 2372, 2861
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 3 cut(s) 25, 2131, 2679
PvuII CAGCTG 2 cut(s) 47, 500
RsaI GTAC 7 cut(s) 1204, 1414, 1965, 2235, 2483, 2591, 2754
RsaNI GTAC 7 cut(s) 1203, 1413, 1964, 2234, 2482, 2590, 2753
RseI CAYNNNNRTG 2 cut(s) 705, 2622
SatI GCNGC 2 cut(s) 45, 1800
Sau96I GGNCC 6 cut(s) 295, 691, 1045, 1792, 2372, 2861
ScaI AGTACT 1 cut(s) 2754
ScrFI CCNGG 4 cut(s) 336, 482, 2370, 2895
SfaNI GCATC 5 cut(s) 164, 616, 826, 889, 2038
SfuI TTCGAA 1 cut(s) 2392
SinI GGWCC 3 cut(s) 1792, 2372, 2861
SmiMI CAYNNNNRTG 2 cut(s) 705, 2622
SmlI CTYRAG 2 cut(s) 1421, 1833
SmoI CTYRAG 2 cut(s) 1421, 1833
SpeI ACTAGT 1 cut(s) 2755
SsiI CCGC 5 cut(s) 326, 947, 1106, 1532, 2850
SspI AATATT 1 cut(s) 2340
SspMI CTAG 8 cut(s) 1113, 1247, 1977, 2111, 2237, 2274, 2499, 2756
StyD4I CCNGG 4 cut(s) 334, 480, 2368, 2893
StyI CCWWGG 4 cut(s) 450, 1112, 1322, 2028
TaaI ACNGT 1 cut(s) 2205
TaiI ACGT 6 cut(s) 1125, 1204, 1222, 1851, 2262, 2580
TaqII GACCGA 1 cut(s) 848
TatI WGTACW 3 cut(s) 1412, 2589, 2752
TfiI GAWTC 7 cut(s) 416, 1193, 1643, 1892, 2102, 2946, 2971
TscAI CASTG 1 cut(s) 2500
TseI GCWGC 2 cut(s) 44, 1799
TspGWI ACGGA 3 cut(s) 1172, 2702, 2816
TspRI CASTG 1 cut(s) 2500
VpaK11BI GGWCC 3 cut(s) 1792, 2372, 2861
VspI ATTAAT 1 cut(s) 2930
XapI RAATTY 5 cut(s) 1009, 2015, 2277, 2441, 2789
XbaI TCTAGA 2 cut(s) 1246, 2273
XceI RCATGY 2 cut(s) 20, 2886
XcmI CCANNNNNNNNNTGG 1 cut(s) 2149
XmaJI CCTAGG 1 cut(s) 1112
XspI CTAG 8 cut(s) 1113, 1247, 1977, 2111, 2237, 2274, 2499, 2756
ZrmI AGTACT 1 cut(s) 2754
Zsp2I ATGCAT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.