CRAL/TRIO, N-terminal domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1625 |
| AarI | CACCTGC | 1 cut(s) | 1756 |
| AatII | GACGTC | 1 cut(s) | 1899 |
| Acc36I | ACCTGC | 1 cut(s) | 1756 |
| AccI | GTMKAC | 1 cut(s) | 2029 |
| AccII | CGCG | 1 cut(s) | 2174 |
| AciI | CCGC | 4 cut(s) | 89, 347, 557, 968 |
| AclWI | GGATC | 4 cut(s) | 1038, 1623, 1958, 2140 |
| AcsI | RAATTY | 6 cut(s) | 205, 1286, 1373, 1862, 2111, 2268 |
| AcuI | CTGAAG | 1 cut(s) | 1623 |
| AcyI | GRCGYC | 1 cut(s) | 1896 |
| AfaI | GTAC | 7 cut(s) | 190, 445, 655, 1323, 1593, 1910, 2151 |
| AfeI | AGCGCT | 1 cut(s) | 1823 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1437, 2051, 2125 |
| AflIII | ACRYGT | 1 cut(s) | 1617 |
| AjnI | CCWGG | 2 cut(s) | 1678, 1726 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 947, 979, 1847, 1879 |
| Alw26I | GTCTC | 2 cut(s) | 1124, 1996 |
| AlwI | GGATC | 4 cut(s) | 1038, 1623, 1958, 2140 |
| Aor51HI | AGCGCT | 1 cut(s) | 1823 |
| AoxI | GGCC | 5 cut(s) | 240, 495, 705, 1877, 1945 |
| ApeKI | GCWGC | 2 cut(s) | 1217, 1259 |
| ApoI | RAATTY | 6 cut(s) | 205, 1286, 1373, 1862, 2111, 2268 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 1463, 1495, 1524, 1556, 1714, 1746, 1974, 2006 |
| AspA2I | CCTAGG | 1 cut(s) | 353 |
| AspLEI | GCGC | 3 cut(s) | 1824, 2174, 2176 |
| AspS9I | GGNCC | 5 cut(s) | 28, 241, 496, 706, 1730 |
| AsuC2I | CCSGG | 2 cut(s) | 1538, 2217 |
| AsuHPI | GGTGA | 5 cut(s) | 331, 541, 751, 1496, 1825 |
| AsuII | TTCGAA | 1 cut(s) | 1750 |
| AvaII | GGWCC | 2 cut(s) | 28, 1730 |
| AvrII | CCTAGG | 1 cut(s) | 353 |
| BanII | GRGCYC | 1 cut(s) | 2217 |
| BbsI | GAAGAC | 1 cut(s) | 1861 |
| BbvI | GCAGC | 2 cut(s) | 1204, 1271 |
| BccI | CCATC | 1 cut(s) | 1741 |
| BciT130I | CCWGG | 2 cut(s) | 1680, 1728 |
| BclI | TGATCA | 4 cut(s) | 133, 391, 601, 1704 |
| BcnI | CCSGG | 2 cut(s) | 1538, 2217 |
| BcoDI | GTCTC | 2 cut(s) | 1124, 1996 |
| BfaI | CTAG | 5 cut(s) | 354, 1335, 1884, 1977, 2078 |
| BfoI | RGCGCY | 1 cut(s) | 1825 |
| BfuAI | ACCTGC | 1 cut(s) | 1756 |
| BglII | AGATCT | 1 cut(s) | 1998 |
| BisI | GCNGC | 2 cut(s) | 1218, 1260 |
| BlnI | CCTAGG | 1 cut(s) | 353 |
| BlsI | GCNGC | 2 cut(s) | 1219, 1261 |
| Bme1390I | CCNGG | 4 cut(s) | 1538, 1680, 1728, 2217 |
| Bme18I | GGWCC | 2 cut(s) | 28, 1730 |
| BmgT120I | GGNCC | 5 cut(s) | 28, 241, 496, 706, 1730 |
| BmiI | GGNNCC | 4 cut(s) | 93, 351, 561, 2214 |
| BmrFI | CCNGG | 4 cut(s) | 1538, 1680, 1728, 2217 |
| BmrI | ACTGGG | 1 cut(s) | 1604 |
| BmsI | GCATC | 4 cut(s) | 166, 421, 631, 1396 |
| BmuI | ACTGGG | 1 cut(s) | 1604 |
| BpiI | GAAGAC | 1 cut(s) | 1861 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1386 |
| Bpu14I | TTCGAA | 1 cut(s) | 1750 |
| BpuEI | CTTGAG | 2 cut(s) | 1399, 1889 |
| BpuMI | CCSGG | 2 cut(s) | 1538, 2217 |
| Bsa29I | ATCGAT | 1 cut(s) | 1458 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1716, 2003 |
| BsaHI | GRCGYC | 1 cut(s) | 1896 |
| BsaJI | CCNNGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1437, 2051, 2125 |
| Bse1I | ACTGG | 2 cut(s) | 1599, 1931 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1716, 2003 |
| BseBI | CCWGG | 2 cut(s) | 1680, 1728 |
| BseCI | ATCGAT | 1 cut(s) | 1458 |
| BseDI | CCNNGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| BseGI | GGATG | 5 cut(s) | 209, 464, 674, 799, 1187 |
| BseJI | GATNNNNATC | 2 cut(s) | 1716, 2003 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1437, 2051, 2125 |
| BseMII | CTCAG | 3 cut(s) | 965, 1963, 2007 |
| BseNI | ACTGG | 2 cut(s) | 1599, 1931 |
| BsePI | GCGCGC | 1 cut(s) | 2172 |
| BseXI | GCAGC | 2 cut(s) | 1204, 1271 |
| Bsh1236I | CGCG | 1 cut(s) | 2174 |
| BshFI | GGCC | 5 cut(s) | 242, 497, 707, 1879, 1947 |
| BshVI | ATCGAT | 1 cut(s) | 1458 |
| BsiSI | CCGG | 2 cut(s) | 1538, 2217 |
| BslFI | GGGAC | 1 cut(s) | 1545 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1437, 2051, 2125 |
| BsmAI | GTCTC | 2 cut(s) | 1124, 1996 |
| BsmFI | GGGAC | 1 cut(s) | 1545 |
| BsnI | GGCC | 5 cut(s) | 242, 497, 707, 1879, 1947 |
| Bsp119I | TTCGAA | 1 cut(s) | 1750 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2217 |
| Bsp1407I | TGTACA | 1 cut(s) | 2149 |
| Bsp19I | CCATGG | 3 cut(s) | 213, 468, 678 |
| BspACI | CCGC | 4 cut(s) | 89, 347, 557, 968 |
| BspANI | GGCC | 5 cut(s) | 242, 497, 707, 1879, 1947 |
| BspCNI | CTCAG | 3 cut(s) | 966, 1962, 2006 |
| BspDI | ATCGAT | 1 cut(s) | 1458 |
| BspFNI | CGCG | 1 cut(s) | 2174 |
| BspHI | TCATGA | 1 cut(s) | 1701 |
| BspLI | GGNNCC | 4 cut(s) | 93, 351, 561, 2214 |
| BspMI | ACCTGC | 1 cut(s) | 1756 |
| BspPI | GGATC | 4 cut(s) | 1038, 1623, 1958, 2140 |
| BspQI | GCTCTTC | 2 cut(s) | 831, 1782 |
| BspT104I | TTCGAA | 1 cut(s) | 1750 |
| BsrGI | TGTACA | 1 cut(s) | 2149 |
| BsrI | ACTGG | 2 cut(s) | 1599, 1931 |
| BssECI | CCNNGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| BssHII | GCGCGC | 1 cut(s) | 2172 |
| BssNAI | GTATAC | 1 cut(s) | 2030 |
| BssNI | GRCGYC | 1 cut(s) | 1896 |
| BssT1I | CCWWGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| Bst1107I | GTATAC | 1 cut(s) | 2030 |
| Bst2UI | CCWGG | 2 cut(s) | 1680, 1728 |
| BstACI | GRCGYC | 1 cut(s) | 1896 |
| BstAUI | TGTACA | 1 cut(s) | 2149 |
| BstBI | TTCGAA | 1 cut(s) | 1750 |
| BstC8I | GCNNGC | 2 cut(s) | 1820, 2174 |
| BstDEI | CTNAG | 7 cut(s) | 974, 1386, 1493, 1737, 1949, 1993, 2208 |
| BstDSI | CCRYGG | 3 cut(s) | 213, 468, 678 |
| BstF5I | GGATG | 5 cut(s) | 209, 464, 674, 799, 1187 |
| BstFNI | CGCG | 1 cut(s) | 2174 |
| BstH2I | RGCGCY | 1 cut(s) | 1825 |
| BstHHI | GCGC | 3 cut(s) | 1824, 2174, 2176 |
| BstMAI | GTCTC | 2 cut(s) | 1124, 1996 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2048 |
| BstNI | CCWGG | 2 cut(s) | 1680, 1728 |
| BstNSI | RCATGY | 1 cut(s) | 1621 |
| BstSCI | CCNGG | 4 cut(s) | 1536, 1678, 1726, 2215 |
| BstUI | CGCG | 1 cut(s) | 2174 |
| BstV1I | GCAGC | 2 cut(s) | 1204, 1271 |
| BstV2I | GAAGAC | 1 cut(s) | 1861 |
| BstX2I | RGATCY | 2 cut(s) | 1628, 1998 |
| BstYI | RGATCY | 2 cut(s) | 1628, 1998 |
| BstZ17I | GTATAC | 1 cut(s) | 2030 |
| Bsu15I | ATCGAT | 1 cut(s) | 1458 |
| BsuRI | GGCC | 5 cut(s) | 242, 497, 707, 1879, 1947 |
| BsuTUI | ATCGAT | 1 cut(s) | 1458 |
| BtgI | CCRYGG | 3 cut(s) | 213, 468, 678 |
| BtgZI | GCGATG | 2 cut(s) | 444, 654 |
| BtsCI | GGATG | 5 cut(s) | 209, 464, 674, 799, 1187 |
| BveI | ACCTGC | 1 cut(s) | 1756 |
| Cac8I | GCNNGC | 2 cut(s) | 1820, 2174 |
| CciI | TCATGA | 1 cut(s) | 1701 |
| CfoI | GCGC | 3 cut(s) | 1824, 2174, 2176 |
| Cfr13I | GGNCC | 5 cut(s) | 28, 241, 496, 706, 1730 |
| ClaI | ATCGAT | 1 cut(s) | 1458 |
| Csp6I | GTAC | 7 cut(s) | 189, 444, 654, 1322, 1592, 1909, 2150 |
| CviAII | CATG | 7 cut(s) | 214, 469, 679, 950, 1001, 1618, 1702 |
| CviQI | GTAC | 7 cut(s) | 189, 444, 654, 1322, 1592, 1909, 2150 |
| DdeI | CTNAG | 7 cut(s) | 974, 1386, 1493, 1737, 1949, 1993, 2208 |
| EciI | GGCGGA | 1 cut(s) | 983 |
| Eco130I | CCWWGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| Eco24I | GRGCYC | 1 cut(s) | 2217 |
| Eco47I | GGWCC | 2 cut(s) | 28, 1730 |
| Eco47III | AGCGCT | 1 cut(s) | 1823 |
| Eco57I | CTGAAG | 1 cut(s) | 1623 |
| EcoRI | GAATTC | 1 cut(s) | 1286 |
| EcoRII | CCWGG | 2 cut(s) | 1678, 1726 |
| EcoT14I | CCWWGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| EcoT38I | GRGCYC | 1 cut(s) | 2217 |
| ErhI | CCWWGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| FaeI | CATG | 7 cut(s) | 217, 472, 682, 953, 1004, 1621, 1705 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1655, 1687 |
| FaqI | GGGAC | 1 cut(s) | 1545 |
| FatI | CATG | 7 cut(s) | 213, 468, 678, 949, 1000, 1617, 1701 |
| FauNDI | CATATG | 1 cut(s) | 2137 |
| FbaI | TGATCA | 4 cut(s) | 133, 391, 601, 1704 |
| FblI | GTMKAC | 1 cut(s) | 2029 |
| Fnu4HI | GCNGC | 2 cut(s) | 1218, 1260 |
| FokI | GGATG | 5 cut(s) | 196, 451, 661, 806, 1174 |
| FriOI | GRGCYC | 1 cut(s) | 2217 |
| Fsp4HI | GCNGC | 2 cut(s) | 1218, 1260 |
| FspBI | CTAG | 5 cut(s) | 354, 1335, 1884, 1977, 2078 |
| GlaI | GCGC | 3 cut(s) | 1823, 2173, 2175 |
| GluI | GCNGC | 2 cut(s) | 1218, 1260 |
| HaeII | RGCGCY | 1 cut(s) | 1825 |
| HaeIII | GGCC | 5 cut(s) | 242, 497, 707, 1879, 1947 |
| HapII | CCGG | 2 cut(s) | 1538, 2217 |
| HhaI | GCGC | 3 cut(s) | 1824, 2174, 2176 |
| Hin1I | GRCGYC | 1 cut(s) | 1896 |
| Hin1II | CATG | 7 cut(s) | 217, 472, 682, 953, 1004, 1621, 1705 |
| Hin6I | GCGC | 3 cut(s) | 1822, 2172, 2174 |
| HinP1I | GCGC | 3 cut(s) | 1822, 2172, 2174 |
| HindIII | AAGCTT | 1 cut(s) | 1559 |
| HinfI | GANTC | 3 cut(s) | 881, 1460, 1887 |
| HpaII | CCGG | 2 cut(s) | 1538, 2217 |
| HphI | GGTGA | 5 cut(s) | 331, 541, 751, 1496, 1825 |
| Hpy166II | GTNNAC | 3 cut(s) | 1402, 2030, 2098 |
| Hpy188I | TCNGA | 8 cut(s) | 880, 937, 1662, 1952, 1996, 2023, 2192, 2298 |
| Hpy8I | GTNNAC | 3 cut(s) | 1402, 2030, 2098 |
| HpyCH4IV | ACGT | 1 cut(s) | 1896 |
| HpyCH4V | TGCA | 3 cut(s) | 1220, 1310, 1808 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2048 |
| HpyF3I | CTNAG | 7 cut(s) | 974, 1386, 1493, 1737, 1949, 1993, 2208 |
| HpySE526I | ACGT | 1 cut(s) | 1896 |
| Hsp92I | GRCGYC | 1 cut(s) | 1896 |
| Hsp92II | CATG | 7 cut(s) | 217, 472, 682, 953, 1004, 1621, 1705 |
| HspAI | GCGC | 3 cut(s) | 1822, 2172, 2174 |
| Ksp22I | TGATCA | 4 cut(s) | 133, 391, 601, 1704 |
| LguI | GCTCTTC | 2 cut(s) | 831, 1782 |
| LmnI | GCTCC | 5 cut(s) | 970, 1744, 2157, 2212, 2246 |
| Lsp1109I | GCAGC | 2 cut(s) | 1204, 1271 |
| LweI | GCATC | 4 cut(s) | 166, 421, 631, 1396 |
| MaeI | CTAG | 5 cut(s) | 354, 1335, 1884, 1977, 2078 |
| MaeII | ACGT | 1 cut(s) | 1896 |
| MaeIII | GTNAC | 4 cut(s) | 1544, 1613, 1831, 2273 |
| MflI | RGATCY | 2 cut(s) | 1628, 1998 |
| MhlI | GDGCHC | 1 cut(s) | 2217 |
| MlyI | GAGTC | 1 cut(s) | 1896 |
| MmeI | TCCRAC | 2 cut(s) | 841, 1215 |
| MseI | TTAA | 6 cut(s) | 911, 1016, 1421, 1557, 1674, 2231 |
| MspA1I | CMGCKG | 1 cut(s) | 1262 |
| MspI | CCGG | 2 cut(s) | 1538, 2217 |
| MspR9I | CCNGG | 4 cut(s) | 1538, 1680, 1728, 2217 |
| MvaI | CCWGG | 2 cut(s) | 1680, 1728 |
| MvnI | CGCG | 1 cut(s) | 2174 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2048 |
| NciI | CCSGG | 2 cut(s) | 1538, 2217 |
| NcoI | CCATGG | 3 cut(s) | 213, 468, 678 |
| NdeI | CATATG | 1 cut(s) | 2137 |
| NlaIII | CATG | 7 cut(s) | 217, 472, 682, 953, 1004, 1621, 1705 |
| NlaIV | GGNNCC | 4 cut(s) | 93, 351, 561, 2214 |
| NmeAIII | GCCGAG | 1 cut(s) | 1855 |
| NmuCI | GTSAC | 1 cut(s) | 1831 |
| NspI | RCATGY | 1 cut(s) | 1621 |
| NspV | TTCGAA | 1 cut(s) | 1750 |
| PagI | TCATGA | 1 cut(s) | 1701 |
| PaqCI | CACCTGC | 1 cut(s) | 1756 |
| PauI | GCGCGC | 1 cut(s) | 2172 |
| PciI | ACATGT | 1 cut(s) | 1617 |
| PciSI | GCTCTTC | 2 cut(s) | 831, 1782 |
| PfeI | GAWTC | 2 cut(s) | 881, 1460 |
| PkrI | GCNGC | 2 cut(s) | 1219, 1261 |
| PleI | GAGTC | 1 cut(s) | 1895 |
| PpsI | GAGTC | 1 cut(s) | 1895 |
| PscI | ACATGT | 1 cut(s) | 1617 |
| PsiI | TTATAA | 1 cut(s) | 1625 |
| Psp6I | CCWGG | 2 cut(s) | 1678, 1726 |
| PspGI | CCWGG | 2 cut(s) | 1678, 1726 |
| PspN4I | GGNNCC | 4 cut(s) | 93, 351, 561, 2214 |
| PspPI | GGNCC | 5 cut(s) | 28, 241, 496, 706, 1730 |
| PsuI | RGATCY | 2 cut(s) | 1628, 1998 |
| PteI | GCGCGC | 1 cut(s) | 2172 |
| PvuII | CAGCTG | 1 cut(s) | 1262 |
| RsaI | GTAC | 7 cut(s) | 190, 445, 655, 1323, 1593, 1910, 2151 |
| RsaNI | GTAC | 7 cut(s) | 189, 444, 654, 1322, 1592, 1909, 2150 |
| SapI | GCTCTTC | 2 cut(s) | 831, 1782 |
| SaqAI | TTAA | 6 cut(s) | 911, 1016, 1421, 1557, 1674, 2231 |
| SatI | GCNGC | 2 cut(s) | 1218, 1260 |
| Sau96I | GGNCC | 5 cut(s) | 28, 241, 496, 706, 1730 |
| SchI | GAGTC | 1 cut(s) | 1896 |
| ScrFI | CCNGG | 4 cut(s) | 1538, 1680, 1728, 2217 |
| SduI | GDGCHC | 1 cut(s) | 2217 |
| SfaNI | GCATC | 4 cut(s) | 166, 421, 631, 1396 |
| SfuI | TTCGAA | 1 cut(s) | 1750 |
| SinI | GGWCC | 2 cut(s) | 28, 1730 |
| SmlI | CTYRAG | 2 cut(s) | 1378, 1904 |
| SmoI | CTYRAG | 2 cut(s) | 1378, 1904 |
| SsiI | CCGC | 4 cut(s) | 89, 347, 557, 968 |
| SspI | AATATT | 1 cut(s) | 1698 |
| SspMI | CTAG | 5 cut(s) | 354, 1335, 1884, 1977, 2078 |
| StyD4I | CCNGG | 4 cut(s) | 1536, 1678, 1726, 2215 |
| StyI | CCWWGG | 6 cut(s) | 213, 353, 468, 563, 678, 776 |
| TaiI | ACGT | 1 cut(s) | 1899 |
| TaqI | TCGA | 6 cut(s) | 290, 980, 1458, 1463, 1668, 1750 |
| TatI | WGTACW | 2 cut(s) | 1908, 2149 |
| TfiI | GAWTC | 2 cut(s) | 881, 1460 |
| Tru1I | TTAA | 6 cut(s) | 911, 1016, 1421, 1557, 1674, 2231 |
| Tru9I | TTAA | 6 cut(s) | 911, 1016, 1421, 1557, 1674, 2231 |
| TseFI | GTSAC | 1 cut(s) | 1831 |
| TseI | GCWGC | 2 cut(s) | 1217, 1259 |
| Tsp45I | GTSAC | 1 cut(s) | 1831 |
| TspDTI | ATGAA | 9 cut(s) | 198, 347, 453, 557, 663, 1017, 1587, 1690, 1769 |
| VpaK11BI | GGWCC | 2 cut(s) | 28, 1730 |
| XapI | RAATTY | 6 cut(s) | 205, 1286, 1373, 1862, 2111, 2268 |
| XbaI | TCTAGA | 1 cut(s) | 1883 |
| XceI | RCATGY | 1 cut(s) | 1621 |
| XmaJI | CCTAGG | 1 cut(s) | 353 |
| XmiI | GTMKAC | 1 cut(s) | 2029 |
| XspI | CTAG | 5 cut(s) | 354, 1335, 1884, 1977, 2078 |
| ZraI | GACGTC | 1 cut(s) | 1897 |