Rmu_sc0005266.1_g000009

Patellin-4-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005266.1
Physical Location & Seq
Forward (+)
35982 .. 36236
255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005266.1_g000009.1.cds

Sequence Viewer

Length: 255 bp
atggtgtgggatctaaccgtggtgggatgggacgtgttgtacaaggaagagttcgttcctgacgatgaagggtcatacaagattttactccaagataagaagagactgcaaggggagggtgtaagaaactccttctaccttagtgaaccagggaagataatcattgcccttgagaattggaatttcaagaacaggagggttctttatcggtataaagccaaacccaccattcccatttacttaactaatagatag
Functional Annotation

Protein Analysis

84

Amino Acids

10.04

Weight (kDa)

9.22

Isoelectric Point (pI)

34.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 18
AcsI RAATTY 1 cut(s) 181
AfaI GTAC 1 cut(s) 41
AflIII ACRYGT 1 cut(s) 33
AgsI TTSAA 1 cut(s) 187
AjiI CACGTC 1 cut(s) 34
AjnI CCWGG 1 cut(s) 148
Alw26I GTCTC 1 cut(s) 97
AlwI GGATC 1 cut(s) 18
ApoI RAATTY 1 cut(s) 181
BccI CCATC 1 cut(s) 21
BciT130I CCWGG 1 cut(s) 150
BcoDI GTCTC 1 cut(s) 97
Bme1390I CCNGG 1 cut(s) 150
BmgBI CACGTC 1 cut(s) 34
BmrFI CCNGG 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 191
BsaJI CCNNGG 2 cut(s) 18, 149
Bse3DI GCAATG 1 cut(s) 162
BseBI CCWGG 1 cut(s) 150
BseDI CCNNGG 2 cut(s) 18, 149
BseGI GGATG 1 cut(s) 32
BseMI GCAATG 1 cut(s) 162
BslFI GGGAC 1 cut(s) 44
BsmAI GTCTC 1 cut(s) 97
BsmFI GGGAC 1 cut(s) 44
Bsp1407I TGTACA 1 cut(s) 39
Bsp143I GATC 1 cut(s) 10
BspPI GGATC 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 162
BsrGI TGTACA 1 cut(s) 39
BssECI CCNNGG 2 cut(s) 18, 149
BssMI GATC 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 150
Bst4CI ACNGT 1 cut(s) 19
Bst6I CTCTTC 2 cut(s) 42, 95
BstAUI TGTACA 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 140
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 32
BstKTI GATC 1 cut(s) 13
BstMAI GTCTC 1 cut(s) 97
BstMBI GATC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 150
BstSCI CCNGG 1 cut(s) 148
BstX2I RGATCY 1 cut(s) 10
BstYI RGATCY 1 cut(s) 10
BtgI CCRYGG 1 cut(s) 18
BtrI CACGTC 1 cut(s) 34
BtsCI GGATG 1 cut(s) 32
Csp6I GTAC 1 cut(s) 40
CviJI RGCY 1 cut(s) 218
CviKI_1 RGCY 1 cut(s) 218
CviQI GTAC 1 cut(s) 40
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 12
DpnII GATC 1 cut(s) 10
Eam1104I CTCTTC 2 cut(s) 42, 95
EarI CTCTTC 2 cut(s) 42, 95
EcoRII CCWGG 1 cut(s) 148
FaiI YATR 2 cut(s) 76, 213
FaqI GGGAC 1 cut(s) 44
FokI GGATG 1 cut(s) 39
Hpy166II GTNNAC 1 cut(s) 146
Hpy188III TCNNGA 2 cut(s) 59, 187
Hpy8I GTNNAC 1 cut(s) 146
HpyAV CCTTC 2 cut(s) 62, 142
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4IV ACGT 1 cut(s) 33
HpyCH4V TGCA 1 cut(s) 109
HpyF3I CTNAG 1 cut(s) 140
HpySE526I ACGT 1 cut(s) 33
Kzo9I GATC 1 cut(s) 10
LpnPI CCDG 4 cut(s) 72, 135, 162, 178
MaeII ACGT 1 cut(s) 33
MalI GATC 1 cut(s) 12
MboI GATC 1 cut(s) 10
MboII GAAGA 3 cut(s) 59, 112, 166
MflI RGATCY 1 cut(s) 10
MluCI AATT 2 cut(s) 175, 181
MnlI CCTC 2 cut(s) 109, 189
MseI TTAA 1 cut(s) 242
MspR9I CCNGG 1 cut(s) 150
MvaI CCWGG 1 cut(s) 150
NdeII GATC 1 cut(s) 10
PcsI WCGNNNNNNNCGW 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 148
PspGI CCWGG 1 cut(s) 148
PsuI RGATCY 1 cut(s) 10
RsaI GTAC 1 cut(s) 41
RsaNI GTAC 1 cut(s) 40
SaqAI TTAA 1 cut(s) 242
Sau3AI GATC 1 cut(s) 10
ScrFI CCNGG 1 cut(s) 150
SetI ASST 2 cut(s) 36, 141
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
Sse9I AATT 2 cut(s) 175, 181
StyD4I CCNGG 1 cut(s) 148
TaaI ACNGT 1 cut(s) 19
TaiI ACGT 1 cut(s) 36
TasI AATT 2 cut(s) 175, 181
TatI WGTACW 1 cut(s) 39
Tru1I TTAA 1 cut(s) 242
Tru9I TTAA 1 cut(s) 242
TspDTI ATGAA 1 cut(s) 81
XapI RAATTY 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.