Rh6CG300400

Patellin-4-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
48063027 .. 48090721
27695 bp
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UTR
Exon/CDS
Intron
Rh6CG300400.1

Sequence Viewer

Length: 336 bp
ATGTTGGAAATTCCTGACTGCAAGAATTTACCGCACGATATAAAGAACAAGACAGAAATCGGAAACAGAGGTGGATTGACAATGGTGTGGGATCTAACCGTGGTGGGATGGGATGTGTTGTACAAGGAAGAGTTCGTTCCTGATGATGAAGGGTCATATAAGATTTTACTCCAAGATAAGAAGAGACTGCAAGGGGAGGGTGTAAGAAACTCCTTCTACCTTAGTGAACCAGGGAAGATAATCATTTCCCTTGAGAATTGGAATTTCAAGAACAGGAGGGTTCTTTATCGGTATAAAGCCAAACCCACCATTCCCATTTACTTAACAAATAGATAG
Functional Annotation

Protein Analysis

111

Amino Acids

13.04

Weight (kDa)

8.99

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GOLD_PATL1_C PF25099 17 - 91 2.9e-26 Patellin-1-like, C-terminal GOLD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 32
AclWI GGATC 1 cut(s) 99
AcsI RAATTY 3 cut(s) 9, 25, 262
AfaI GTAC 1 cut(s) 122
AgsI TTSAA 1 cut(s) 268
AjnI CCWGG 1 cut(s) 229
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 1 cut(s) 99
ApoI RAATTY 3 cut(s) 9, 25, 262
BccI CCATC 1 cut(s) 102
BciT130I CCWGG 1 cut(s) 231
BcoDI GTCTC 1 cut(s) 178
Bme1390I CCNGG 1 cut(s) 231
BmrFI CCNGG 1 cut(s) 231
BpuEI CTTGAG 1 cut(s) 272
BsaJI CCNNGG 2 cut(s) 99, 230
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 2 cut(s) 99, 230
BseGI GGATG 2 cut(s) 113, 118
BsmAI GTCTC 1 cut(s) 178
Bsp1407I TGTACA 1 cut(s) 120
Bsp143I GATC 1 cut(s) 91
BspACI CCGC 1 cut(s) 32
BspPI GGATC 1 cut(s) 99
BsrGI TGTACA 1 cut(s) 120
BssECI CCNNGG 2 cut(s) 99, 230
BssMI GATC 1 cut(s) 91
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 1 cut(s) 100
Bst6I CTCTTC 2 cut(s) 123, 176
BstAUI TGTACA 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 221
BstDSI CCRYGG 1 cut(s) 99
BstF5I GGATG 2 cut(s) 113, 118
BstKTI GATC 1 cut(s) 94
BstMAI GTCTC 1 cut(s) 178
BstMBI GATC 1 cut(s) 91
BstNI CCWGG 1 cut(s) 231
BstSCI CCNGG 1 cut(s) 229
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
BtgI CCRYGG 1 cut(s) 99
BtsCI GGATG 2 cut(s) 113, 118
Csp6I GTAC 1 cut(s) 121
CviJI RGCY 1 cut(s) 299
CviKI_1 RGCY 1 cut(s) 299
CviQI GTAC 1 cut(s) 121
DdeI CTNAG 1 cut(s) 221
DpnI GATC 1 cut(s) 93
DpnII GATC 1 cut(s) 91
Eam1104I CTCTTC 2 cut(s) 123, 176
EarI CTCTTC 2 cut(s) 123, 176
EcoRII CCWGG 1 cut(s) 229
FaiI YATR 4 cut(s) 41, 157, 159, 294
FokI GGATG 2 cut(s) 120, 125
Hpy166II GTNNAC 1 cut(s) 227
Hpy188I TCNGA 1 cut(s) 62
Hpy188III TCNNGA 3 cut(s) 14, 140, 268
Hpy8I GTNNAC 1 cut(s) 227
HpyAV CCTTC 2 cut(s) 143, 223
HpyCH4III ACNGT 1 cut(s) 100
HpyCH4V TGCA 2 cut(s) 21, 190
HpyF3I CTNAG 1 cut(s) 221
Kzo9I GATC 1 cut(s) 91
LpnPI CCDG 5 cut(s) 27, 153, 216, 243, 259
MalI GATC 1 cut(s) 93
MboI GATC 1 cut(s) 91
MboII GAAGA 3 cut(s) 140, 193, 247
MflI RGATCY 1 cut(s) 91
MluCI AATT 4 cut(s) 9, 25, 256, 262
MnlI CCTC 3 cut(s) 62, 190, 270
MseI TTAA 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 231
MvaI CCWGG 1 cut(s) 231
NdeII GATC 1 cut(s) 91
Psp6I CCWGG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 229
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 1 cut(s) 122
RsaNI GTAC 1 cut(s) 121
SaqAI TTAA 1 cut(s) 323
Sau3AI GATC 1 cut(s) 91
ScrFI CCNGG 1 cut(s) 231
SetI ASST 2 cut(s) 73, 222
SmlI CTYRAG 1 cut(s) 251
SmoI CTYRAG 1 cut(s) 251
Sse9I AATT 4 cut(s) 9, 25, 256, 262
SsiI CCGC 1 cut(s) 32
StyD4I CCNGG 1 cut(s) 229
TaaI ACNGT 1 cut(s) 100
TasI AATT 4 cut(s) 9, 25, 256, 262
TatI WGTACW 1 cut(s) 120
Tru1I TTAA 1 cut(s) 323
Tru9I TTAA 1 cut(s) 323
TspDTI ATGAA 1 cut(s) 162
XapI RAATTY 3 cut(s) 9, 25, 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.