Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

33337057 .. 33341022

Gene Structure 3966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3066 bp

ATGGGTGTTCAAGATTTGTGGGTGGTCATCTTTGTTATTGGGTTTTGCTTCCAAGCTCAGGTTTTGAGCTCTCAGAACCTGACCTGCAATCTCAATGATTTGAATGCATTGGAGGGTTTCATGGGTGGTCTGCAGAGTGCCCTTGGTAATTGGGGCAGGAATTTCTCTGATGATTGCTGTAAATGGGCAGGTATTACTTGCAACTCTTCCTTCTCTCTTGGATTGGATGATTCTGTTGATAGTTATAGAGTGGTTGAGTTGGATCTTTCGAGTAGGAGACTATATGGGAACCTTTCTGAATCTTTGGGGAATTTGGAACAACTTAGAGCCCTCAATCTTTCTCACAATTTCCTTAAAAAATCACTTCCTGCTTCACTTTTCCAATTACCAAACTTAGAGTACTTAGACTTGAGTTCTAATGACTTTTCTGGCCCCATTCCAGTCGATTTCAATTTACCTTCGATTCTGTCACTTGACATCTCTCAAAATTTCTTGAATGGTTCTATTCCACAAAGCATTTGTGTAAATTCTACTCGGCTTCGGGTACTGAAGCTGGCTGTGAACTACTTGTCTGGTAGTCTTCCAGAAAGTCTTGGCAATTGTAGTTCCTTGGAGGACCTTTGTCTCCTCACGAATAATCTCTCTGGTGGTGTACCTGAAGGTATATATCAGCTGCAGAATCTGACCAGATTGACCATTGAAGATAACAAGCTTACCGGGCCGCTGAGCAAAGAAGTTGGTAACCTGATCAACCTTACTCGGTTGGATATATCAACTAATTGGTTTTCAGGGACCATTCCGGACATCTTCCACAGCCTCCGGAGGTTACAGTTTTTTGTTGCTCATTCCAATAATTTCAGTGGTCCGATACCCCCTTCCTTGTCAAGTTCTCCAACCATCTCGTTGCTGAATGTGAGAAACAACTCATTGGATGGTCCAATTGATCTAAATTGTTCAGCAATGACAAGTTTGGTCTCTCTTGATCTAGGTTCAAATCAGTTTGATGGGGATATTCCATCTAATCTTCCCACTTGCCGGCATTTGAATAATATAAATCTTGCCAGGAACAACTTGGTTGGCCAAATTCCTGACAGCTTCAAGGACTTTCATACTCTCAGTTACCTCTCACTTTCAAATGCCAGCTATTCTAATCTATCATCTGCCCTTCATATCTTACAGCAGTGTCAGAATCTAACCACTTTGGTTCTCACCATGAACTTCTATGATGAAGAATTGCCAGCTGATCCAAACCTTCATTTTCCAAGGTTGAAGGTATTTATTCTTGCAAATTCTCGGCTCACAGGTTCGATACCCCAATGGTTGAGGAAGAGCAGCAGATTGCAGTTATTGGATATATCATGGAACCGCTTGAAGGGTACAGTTCCAGCTTGGTTTGGCAATTTTACTAATCTCTTCTACTTGGACATATCAAACAATACTTTTACTGGGGAGATCCCGAGTAGTTTAACCGGACTACAGAGCCTCATTGATGGGAATTTTTCCTCAGTTCCGGAACCTTCCCCTGATTTTCCTCTTTTCCAGAAAAAGAATGTAAGTGCAAGGGGATTGCAGTACAATCAAGTTTGGAGCTTTCCACCGACGCTGGAACTTAGCAACAATAATTTCAGTGGACAGATCTGGCCAGAATTTGGGAATCTGAAATCCCTTCATGTATTGGATCTGAAGTGCAACAATTTATCTGGACCAATTCCAAGTTCTCTTTCTAATATGGTCAGCTTAGAGACTTTGGATTTGTCTCATAACAAGCTTTCAGGGATAATACCCAGTTCATTGATTCGCCTCAGTTTTTTGTCCAAGTTCAGTGTTGCAGACAATCAATTAGAGGGGGAGATCCCTAGTGGAGGTCAGTTTGGGACTTTCCCAAATTCAAGCTTTGAAGGGAACAACAATCTTTGTGGTGACCATGCTCCTCCATGTCCATCCAAGGTTTATACTGATCTCGATCAAACCAGAAAATCAAGAATGAATGTAGGATCTATTATTGGTATAGCTGTTGGAACTGTATTTGGAACAGCAATGCTTTTTGCTCTCATATTCATAATTGTGATTCGGGGACATAGTCGAAGAGAGGTTGATCCTGAAAAAGAGCATGATATGGAAGAGAAGTATTTGGAAGAACTTGGTTCAAAATCAGTGGTTCTTTTCCAAAACAAGGAGAACAATAAAGAACTCTCTCTTGACGACCTCCTGCACGCCACCAACAATTTTGATCAGGCAAATATCATTGGCTGTGGGGGTTTTGGTCTGGTTTACAAAGCCACCCTCCCTGATGGTAAGAAGGTTGCAATCAAGCGCCTGTCTGGTGACTGTGGCCAGATGGATAGAGAATTCCGTGCTGAAGTTGAAGCACTGTCAAAAGCTCAACATCCAAATCTTGTCCATCTTCAAGGGTATTGCACTTATAAAAGTGACAGGCTTTTGATATATTCTTACATGGAGAACAGTAGTCTCGACTATTGGTTGCATGAAAAGCTGGATGGGGCATCCTGTCTAGATTGGAATACAAGGCTTAAAATTGCTCAAGGGGCAGCAAGGGGGCTTGCTTATTTGCATCAATCATGCGAACCCCATATTGTTCATCGGGATATAAAGTCAAGTAATATTCTTTTAGATGAGAATTTTAAAGCCCACTTAGCTGATTTTGGTCTTGCAAGGCTCCTGCTTCCCTATGATACTCATGTAACAACTGATCTTGTTGGGACATTGGGCTACATTCCTCCCGAGTATGGCCAAGCCTCTGTTGCTACTTACAAGGGCGATGTGTACAGTTTTGGGGTTGTTCTTTTGGAGCTTCTAACTGGAAAAAGGCCTATGGATATGTGCAAGCCAAAAGTAGCTCGGGATTTGATCTCTTGGGTGTTTCAGATGAAGAGGGAGAAGAGGGAAACTGAAGTGTTTGATCCAGTCATTTATGACAAGCAGAAAGATCAGGAGCTTTTGTGTGTTTTAGAGATTGCATTGCTTTGCTTAAGTGGATGCCCTAAGGTGAGACCTTCTACTCAGCAGCTAGTTTCTTGGCTCGATAATATCAACATCAAAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1022

Amino Acids

113.26

Weight (kDa)

5.56

Isoelectric Point (pI)

34.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 68	4.8e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	85 - 142	1.1e-07	Leucine rich repeat
LRR_14	PF23598	100 - 330	1.5e-09	Leucine-rich repeat region
LRR_4	PF12799	107 - 143	4.8e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	175 - 428	3.8e-07	Leucine-rich repeat region
LRR_8	PF13855	534 - 590	1.8e-07	Leucine rich repeat
LRR_8	PF13855	555 - 614	1.1e-07	Leucine rich repeat
Pkinase	PF00069	745 - 1011	9.1e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	747 - 968	1.7e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2424
Acc36I	ACCTGC	2 cut(s)	92, 179
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AccIII	TCCGGA	3 cut(s)	799, 819, 1510
AciI	CCGC	2 cut(s)	722, 1366
AclWI	GGATC	8 cut(s)	270, 1238, 1447, 1686, 1846, 2002, 2090, 2915
AcoI	YGGCCR	4 cut(s)	1078, 1640, 2332, 2749
AcuI	CTGAAG	5 cut(s)	569, 678, 1703, 2379, 2931
AfaI	GTAC	6 cut(s)	401, 546, 654, 1378, 1574, 2786
AfiI	CCNNNNNNNGG	7 cut(s)	58, 1035, 1372, 1649, 1862, 2173, 2747
AflII	CTTAAG	1 cut(s)	2989
AjnI	CCWGG	1 cut(s)	1061
AjuI	GAANNNNNNNTTGG	4 cut(s)	1699, 1705, 1731, 1737
Alw21I	GWGCWC	1 cut(s)	71
Alw26I	GTCTC	7 cut(s)	271, 629, 979, 1736, 1761, 2474, 3004
AlwI	GGATC	8 cut(s)	270, 1238, 1447, 1686, 1846, 2002, 2090, 2915
AlwNI	CAGNNNCTG	2 cut(s)	79, 682
Ama87I	CYCGRG	3 cut(s)	1456, 2741, 2859
Aor13HI	TCCGGA	3 cut(s)	799, 819, 1510
AoxI	GGCC	7 cut(s)	430, 719, 1078, 1640, 2332, 2749, 2828
ApeKI	GCWGC	4 cut(s)	673, 1332, 2549, 3025
ArsI	GACNNNNNNTTYG	2 cut(s)	1735, 1767
AspLEI	GCGC	1 cut(s)	2316
AspS9I	GGNCC	7 cut(s)	431, 616, 719, 792, 863, 935, 1703
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	4 cut(s)	1201, 1931, 2336, 3019
AvaI	CYCGRG	3 cut(s)	1456, 2741, 2859
AvaII	GGWCC	5 cut(s)	616, 792, 863, 935, 1703
AxyI	CCTNAGG	1 cut(s)	3003
BaeGI	GKGCMC	1 cut(s)	142
BaeI	ACNNNNGTAYC	2 cut(s)	2685, 2718
BalI	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
BanII	GRGCYC	2 cut(s)	71, 331
BbsI	GAAGAC	1 cut(s)	572
Bbv12I	GWGCWC	1 cut(s)	71
BbvI	GCAGC	4 cut(s)	660, 1344, 2561, 3037
BciT130I	CCWGG	1 cut(s)	1063
BclI	TGATCA	2 cut(s)	747, 2230
BcnI	CCSGG	1 cut(s)	718
BcoDI	GTCTC	7 cut(s)	271, 629, 979, 1736, 1761, 2474, 3004
BfaI	CTAG	5 cut(s)	986, 1857, 2513, 3029, 3064
BfmI	CTRYAG	3 cut(s)	131, 674, 1475
BfoI	RGCGCY	1 cut(s)	2317
BfrI	CTTAAG	1 cut(s)	2989
BfuAI	ACCTGC	2 cut(s)	92, 179
BglII	AGATCT	1 cut(s)	1635
BisI	GCNGC	5 cut(s)	674, 722, 1333, 2550, 3026
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	5 cut(s)	675, 723, 1334, 2551, 3027
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	2 cut(s)	718, 1063
Bme18I	GGWCC	5 cut(s)	616, 792, 863, 935, 1703
BmeT110I	CYCGRG	3 cut(s)	1456, 2741, 2859
BmgT120I	GGNCC	7 cut(s)	431, 616, 719, 792, 863, 935, 1703
BmiI	GGNNCC	6 cut(s)	290, 433, 793, 1364, 1515, 2678
BmrFI	CCNGG	2 cut(s)	718, 1063
BmrI	ACTGGG	2 cut(s)	1455, 1779
BmsI	GCATC	3 cut(s)	2513, 2581, 2987
BmuI	ACTGGG	2 cut(s)	1455, 1779
BoxI	GACNNNNGTC	1 cut(s)	621
BpiI	GAAGAC	1 cut(s)	572
Bpu10I	CCTNAGC	1 cut(s)	57
Bpu1102I	GCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	2 cut(s)	430, 2526
BpuMI	CCSGG	1 cut(s)	718
BsaBI	GATNNNNATC	1 cut(s)	1962
BsaI	GGTCTC	2 cut(s)	979, 3004
BsaJI	CCNNGG	4 cut(s)	142, 609, 1262, 1944
BsaWI	WCCGGW	4 cut(s)	799, 819, 1469, 1510
BsaXI	ACNNNNNCTCC	2 cut(s)	2945, 2975
Bsc4I	CCNNNNNNNGG	7 cut(s)	58, 1035, 1372, 1649, 1862, 2173, 2747
Bse118I	RCCGGY	1 cut(s)	1035
Bse1I	ACTGG	5 cut(s)	440, 1450, 1785, 2824, 2924
Bse21I	CCTNAGG	1 cut(s)	3003
Bse3DI	GCAATG	3 cut(s)	966, 2043, 2978
Bse8I	GATNNNNATC	1 cut(s)	1962
BseAI	TCCGGA	3 cut(s)	799, 819, 1510
BseBI	CCWGG	1 cut(s)	1063
BseDI	CCNNGG	4 cut(s)	142, 609, 1262, 1944
BseGI	GGATG	7 cut(s)	232, 937, 1940, 2386, 2503, 2504, 3002
BseJI	GATNNNNATC	1 cut(s)	1962
BseLI	CCNNNNNNNGG	7 cut(s)	58, 1035, 1372, 1649, 1862, 2173, 2747
BseMI	GCAATG	3 cut(s)	966, 2043, 2978
BseMII	CTCAG	7 cut(s)	71, 86, 716, 1129, 1518, 1816, 3035
BseNI	ACTGG	5 cut(s)	440, 1450, 1785, 2824, 2924
BseRI	GAGGAG	2 cut(s)	617, 1920
BseSI	GKGCMC	1 cut(s)	142
BseXI	GCAGC	4 cut(s)	660, 1344, 2561, 3037
BsgI	GTGCAG	1 cut(s)	2195
BshFI	GGCC	7 cut(s)	432, 721, 1080, 1642, 2334, 2751, 2830
BsiHKAI	GWGCWC	1 cut(s)	71
BsiHKCI	CYCGRG	3 cut(s)	1456, 2741, 2859
BsiSI	CCGG	6 cut(s)	717, 800, 820, 1036, 1470, 1511
BslFI	GGGAC	4 cut(s)	805, 1888, 2088, 2734
BslI	CCNNNNNNNGG	7 cut(s)	58, 1035, 1372, 1649, 1862, 2173, 2747
BsmAI	GTCTC	7 cut(s)	271, 629, 979, 1736, 1761, 2474, 3004
BsmFI	GGGAC	4 cut(s)	805, 1888, 2088, 2734
BsmI	GAATGC	1 cut(s)	109
BsnI	GGCC	7 cut(s)	432, 721, 1080, 1642, 2334, 2751, 2830
Bso31I	GGTCTC	2 cut(s)	979, 3004
BsoBI	CYCGRG	3 cut(s)	1456, 2741, 2859
Bsp1286I	GDGCHC	3 cut(s)	71, 142, 331
Bsp13I	TCCGGA	3 cut(s)	799, 819, 1510
Bsp1407I	TGTACA	1 cut(s)	2784
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	2 cut(s)	722, 1366
BspANI	GGCC	7 cut(s)	432, 721, 1080, 1642, 2334, 2751, 2830
BspCNI	CTCAG	7 cut(s)	70, 85, 717, 1128, 1517, 1815, 3034
BspEI	TCCGGA	3 cut(s)	799, 819, 1510
BspLI	GGNNCC	6 cut(s)	290, 433, 793, 1364, 1515, 2678
BspMAI	CTGCAG	2 cut(s)	135, 678
BspMI	ACCTGC	2 cut(s)	92, 179
BspPI	GGATC	8 cut(s)	270, 1238, 1447, 1686, 1846, 2002, 2090, 2915
BspQI	GCTCTTC	1 cut(s)	1322
BspTI	CTTAAG	1 cut(s)	2989
BspTNI	GGTCTC	2 cut(s)	979, 3004
BsrDI	GCAATG	3 cut(s)	966, 2043, 2978
BsrFI	RCCGGY	1 cut(s)	1035
BsrGI	TGTACA	1 cut(s)	2784
BsrI	ACTGG	5 cut(s)	440, 1450, 1785, 2824, 2924
BssAI	RCCGGY	1 cut(s)	1035
BssECI	CCNNGG	4 cut(s)	142, 609, 1262, 1944
BssT1I	CCWWGG	4 cut(s)	142, 609, 1262, 1944
Bst2UI	CCWGG	1 cut(s)	1063
Bst4CI	ACNGT	7 cut(s)	831, 1381, 2023, 2330, 2373, 2465, 2789
Bst6I	CTCTTC	7 cut(s)	211, 1322, 1418, 2080, 2115, 2885, 2894
BstAFI	CTTAAG	1 cut(s)	2989
BstAUI	TGTACA	1 cut(s)	2784
BstC8I	GCNNGC	7 cut(s)	555, 1037, 1141, 1239, 2214, 2562, 2846
BstEII	GGTNACC	2 cut(s)	740, 1919
BstENI	CCTNNNNNAGG	1 cut(s)	1860
BstF5I	GGATG	7 cut(s)	232, 937, 1940, 2386, 2503, 2504, 3002
BstH2I	RGCGCY	1 cut(s)	2317
BstHHI	GCGC	1 cut(s)	2316
BstMAI	GTCTC	7 cut(s)	271, 629, 979, 1736, 1761, 2474, 3004
BstMWI	GCNNNNNNNGC	5 cut(s)	718, 2491, 2546, 2654, 2762
BstNI	CCWGG	1 cut(s)	1063
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	2 cut(s)	740, 1919
BstSCI	CCNGG	2 cut(s)	716, 1061
BstSFI	CTRYAG	3 cut(s)	131, 674, 1475
BstSLI	GKGCMC	1 cut(s)	142
BstV1I	GCAGC	4 cut(s)	660, 1344, 2561, 3037
BstV2I	GAAGAC	1 cut(s)	572
BstX2I	RGATCY	6 cut(s)	262, 1452, 1635, 1678, 1851, 1994
BstYI	RGATCY	6 cut(s)	262, 1452, 1635, 1678, 1851, 1994
Bsu36I	CCTNAGG	1 cut(s)	3003
BsuRI	GGCC	7 cut(s)	432, 721, 1080, 1642, 2334, 2751, 2830
BtgZI	GCGATG	1 cut(s)	2793
BtsCI	GGATG	7 cut(s)	232, 937, 1940, 2386, 2503, 2504, 3002
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	6 cut(s)	865, 1187, 1633, 1828, 2160, 2369
BveI	ACCTGC	2 cut(s)	92, 179
Cac8I	GCNNGC	7 cut(s)	555, 1037, 1141, 1239, 2214, 2562, 2846
CaiI	CAGNNNCTG	2 cut(s)	79, 682
CfoI	GCGC	1 cut(s)	2316
Cfr10I	RCCGGY	1 cut(s)	1035
Cfr13I	GGNCC	7 cut(s)	431, 616, 719, 792, 863, 935, 1703
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	6 cut(s)	400, 545, 653, 1377, 1573, 2785
CspCI	CAANNNNNGTGG	5 cut(s)	34, 1897, 1932, 2136, 2171
CviQI	GTAC	6 cut(s)	400, 545, 653, 1377, 1573, 2785
DraI	TTTAAA	1 cut(s)	2644
EaeI	YGGCCR	4 cut(s)	1078, 1640, 2332, 2749
Eam1104I	CTCTTC	7 cut(s)	211, 1322, 1418, 2080, 2115, 2885, 2894
EarI	CTCTTC	7 cut(s)	211, 1322, 1418, 2080, 2115, 2885, 2894
Ecl136II	GAGCTC	1 cut(s)	69
Eco130I	CCWWGG	4 cut(s)	142, 609, 1262, 1944
Eco147I	AGGCCT	1 cut(s)	2830
Eco24I	GRGCYC	2 cut(s)	71, 331
Eco31I	GGTCTC	2 cut(s)	979, 3004
Eco47I	GGWCC	5 cut(s)	616, 792, 863, 935, 1703
Eco53kI	GAGCTC	1 cut(s)	69
Eco57I	CTGAAG	5 cut(s)	569, 678, 1703, 2379, 2931
Eco81I	CCTNAGG	1 cut(s)	3003
Eco88I	CYCGRG	3 cut(s)	1456, 2741, 2859
Eco91I	GGTNACC	2 cut(s)	740, 1919
EcoICRI	GAGCTC	1 cut(s)	69
EcoNI	CCTNNNNNAGG	1 cut(s)	1860
EcoO109I	RGGNCCY	1 cut(s)	616
EcoO65I	GGTNACC	2 cut(s)	740, 1919
EcoRI	GAATTC	1 cut(s)	2348
EcoRII	CCWGG	1 cut(s)	1061
EcoT14I	CCWWGG	4 cut(s)	142, 609, 1262, 1944
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	2 cut(s)	71, 331
ErhI	CCWWGG	4 cut(s)	142, 609, 1262, 1944
FaqI	GGGAC	4 cut(s)	805, 1888, 2088, 2734
FbaI	TGATCA	2 cut(s)	747, 2230
Fnu4HI	GCNGC	5 cut(s)	674, 722, 1333, 2550, 3026
FokI	GGATG	7 cut(s)	239, 944, 1927, 2373, 2491, 2510, 3009
FriOI	GRGCYC	2 cut(s)	71, 331
Fsp4HI	GCNGC	5 cut(s)	674, 722, 1333, 2550, 3026
FspBI	CTAG	5 cut(s)	986, 1857, 2513, 3029, 3064
GlaI	GCGC	1 cut(s)	2315
GluI	GCNGC	5 cut(s)	674, 722, 1333, 2550, 3026
HaeII	RGCGCY	1 cut(s)	2317
HaeIII	GGCC	7 cut(s)	432, 721, 1080, 1642, 2334, 2751, 2830
HapII	CCGG	6 cut(s)	717, 800, 820, 1036, 1470, 1511
HgaI	GACGC	1 cut(s)	1609
HhaI	GCGC	1 cut(s)	2316
Hin6I	GCGC	1 cut(s)	2314
HinP1I	GCGC	1 cut(s)	2314
HindIII	AAGCTT	3 cut(s)	710, 1766, 1891
HinfI	GANTC	8 cut(s)	230, 299, 463, 679, 1189, 1654, 1795, 2068
HpaII	CCGG	6 cut(s)	717, 800, 820, 1036, 1470, 1511
HphI	GGTGA	4 cut(s)	1201, 1931, 2336, 3019
Hpy166II	GTNNAC	5 cut(s)	562, 653, 1631, 2272, 2785
Hpy188I	TCNGA	9 cut(s)	75, 169, 298, 684, 867, 1188, 1659, 1683, 2886
Hpy8I	GTNNAC	5 cut(s)	562, 653, 1631, 2272, 2785
Hpy99I	CGWCG	1 cut(s)	1603
HpyCH4III	ACNGT	7 cut(s)	831, 1381, 2023, 2330, 2373, 2465, 2789
HpyF10VI	GCNNNNNNNGC	5 cut(s)	718, 2491, 2546, 2654, 2762
HspAI	GCGC	1 cut(s)	2314
Kpn2I	TCCGGA	3 cut(s)	799, 819, 1510
KroI	GCCGGC	1 cut(s)	1035
KroNI	GCCGGC	1 cut(s)	1037
Ksp22I	TGATCA	2 cut(s)	747, 2230
LguI	GCTCTTC	1 cut(s)	1322
LmnI	GCTCC	5 cut(s)	1587, 1933, 2682, 2809, 2953
Lsp1109I	GCAGC	4 cut(s)	660, 1344, 2561, 3037
LweI	GCATC	3 cut(s)	2513, 2581, 2987
MaeI	CTAG	5 cut(s)	986, 1857, 2513, 3029, 3064
MaeIII	GTNAC	8 cut(s)	468, 740, 825, 1118, 1919, 2324, 2429, 2701
MfeI	CAATTG	2 cut(s)	598, 939
MflI	RGATCY	6 cut(s)	262, 1452, 1635, 1678, 1851, 1994
MhlI	GDGCHC	3 cut(s)	71, 142, 331
MlsI	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
MluNI	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
MmeI	TCCRAC	4 cut(s)	240, 744, 917, 1996
Mox20I	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
Mph1103I	ATGCAT	1 cut(s)	109
MroI	TCCGGA	3 cut(s)	799, 819, 1510
MroNI	GCCGGC	1 cut(s)	1035
MscI	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
MseI	TTAA	5 cut(s)	354, 1466, 2532, 2643, 2990
MslI	CAYNNNNRTG	1 cut(s)	2063
Msp20I	TGGCCA	4 cut(s)	1080, 1642, 2334, 2751
MspA1I	CMGCKG	3 cut(s)	673, 724, 1241
MspCI	CTTAAG	1 cut(s)	2989
MspI	CCGG	6 cut(s)	717, 800, 820, 1036, 1470, 1511
MspR9I	CCNGG	2 cut(s)	718, 1063
MunI	CAATTG	2 cut(s)	598, 939
Mva1269I	GAATGC	1 cut(s)	109
MvaI	CCWGG	1 cut(s)	1063
MwoI	GCNNNNNNNGC	5 cut(s)	718, 2491, 2546, 2654, 2762
NaeI	GCCGGC	1 cut(s)	1037
NciI	CCSGG	1 cut(s)	718
NgoMIV	GCCGGC	1 cut(s)	1035
NlaIV	GGNNCC	6 cut(s)	290, 433, 793, 1364, 1515, 2678
NmeAIII	GCCGAG	2 cut(s)	514, 1273
NmuCI	GTSAC	4 cut(s)	468, 1919, 2324, 2429
NsiI	ATGCAT	1 cut(s)	109
PceI	AGGCCT	1 cut(s)	2830
PciSI	GCTCTTC	1 cut(s)	1322
PctI	GAATGC	1 cut(s)	109
PdiI	GCCGGC	1 cut(s)	1037
PfeI	GAWTC	8 cut(s)	230, 299, 463, 679, 1189, 1654, 1795, 2068
PflFI	GACNNNGTC	1 cut(s)	2079
PflMI	CCANNNNNTGG	1 cut(s)	1649
PkrI	GCNGC	5 cut(s)	675, 723, 1334, 2551, 3027
PpuMI	RGGWCCY	1 cut(s)	616
PshAI	GACNNNNGTC	1 cut(s)	621
PsiI	TTATAA	1 cut(s)	2424
Psp124BI	GAGCTC	1 cut(s)	71
Psp5II	RGGWCCY	1 cut(s)	616
Psp6I	CCWGG	1 cut(s)	1061
PspEI	GGTNACC	2 cut(s)	740, 1919
PspGI	CCWGG	1 cut(s)	1061
PspN4I	GGNNCC	6 cut(s)	290, 433, 793, 1364, 1515, 2678
PspPI	GGNCC	7 cut(s)	431, 616, 719, 792, 863, 935, 1703
PspPPI	RGGWCCY	1 cut(s)	616
PstI	CTGCAG	2 cut(s)	135, 678
PstNI	CAGNNNCTG	2 cut(s)	79, 682
PsuI	RGATCY	6 cut(s)	262, 1452, 1635, 1678, 1851, 1994
PsyI	GACNNNGTC	1 cut(s)	2079
PvuII	CAGCTG	2 cut(s)	673, 1241
RsaI	GTAC	6 cut(s)	401, 546, 654, 1378, 1574, 2786
RsaNI	GTAC	6 cut(s)	400, 545, 653, 1377, 1573, 2785
RseI	CAYNNNNRTG	1 cut(s)	2063
SacI	GAGCTC	1 cut(s)	71
SapI	GCTCTTC	1 cut(s)	1322
SaqAI	TTAA	5 cut(s)	354, 1466, 2532, 2643, 2990
SatI	GCNGC	5 cut(s)	674, 722, 1333, 2550, 3026
Sau96I	GGNCC	7 cut(s)	431, 616, 719, 792, 863, 935, 1703
ScaI	AGTACT	1 cut(s)	401
ScrFI	CCNGG	2 cut(s)	718, 1063
SduI	GDGCHC	3 cut(s)	71, 142, 331
SfaNI	GCATC	3 cut(s)	2513, 2581, 2987
SfcI	CTRYAG	3 cut(s)	131, 674, 1475
SinI	GGWCC	5 cut(s)	616, 792, 863, 935, 1703
SmiMI	CAYNNNNRTG	1 cut(s)	2063
SmlI	CTYRAG	3 cut(s)	409, 2541, 2989
SmoI	CTYRAG	3 cut(s)	409, 2541, 2989
SseBI	AGGCCT	1 cut(s)	2830
SsiI	CCGC	2 cut(s)	722, 1366
SspI	AATATT	1 cut(s)	2623
SspMI	CTAG	5 cut(s)	986, 1857, 2513, 3029, 3064
SstI	GAGCTC	1 cut(s)	71
StuI	AGGCCT	1 cut(s)	2830
StyD4I	CCNGG	2 cut(s)	716, 1061
StyI	CCWWGG	4 cut(s)	142, 609, 1262, 1944
TaaI	ACNGT	7 cut(s)	831, 1381, 2023, 2330, 2373, 2465, 2789
TaqI	TCGA	8 cut(s)	269, 444, 461, 1307, 1962, 2083, 2472, 3042
TatI	WGTACW	3 cut(s)	399, 1572, 2784
TauI	GCSGC	1 cut(s)	724
TfiI	GAWTC	8 cut(s)	230, 299, 463, 679, 1189, 1654, 1795, 2068
Tru1I	TTAA	5 cut(s)	354, 1466, 2532, 2643, 2990
Tru9I	TTAA	5 cut(s)	354, 1466, 2532, 2643, 2990
TscAI	CASTG	6 cut(s)	865, 1187, 1633, 1828, 2160, 2376
TseFI	GTSAC	4 cut(s)	468, 1919, 2324, 2429
TseI	GCWGC	4 cut(s)	673, 1332, 2549, 3025
Tsp45I	GTSAC	4 cut(s)	468, 1919, 2324, 2429
TspGWI	ACGGA	1 cut(s)	2342
TspRI	CASTG	6 cut(s)	865, 1187, 1633, 1828, 2160, 2376
Tth111I	GACNNNGTC	1 cut(s)	2079
Van91I	CCANNNNNTGG	1 cut(s)	1649
Vha464I	CTTAAG	1 cut(s)	2989
VpaK11BI	GGWCC	5 cut(s)	616, 792, 863, 935, 1703
XagI	CCTNNNNNAGG	1 cut(s)	1860
XbaI	TCTAGA	1 cut(s)	2512
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1069
XspI	CTAG	5 cut(s)	986, 1857, 2513, 3029, 3064
ZrmI	AGTACT	1 cut(s)	401
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.