Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Forward (+)

504484 .. 507549

Gene Structure 3066 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g00800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3066 bp

ATGGGTGTTCAAGATTTCTGGGTTTTCATTTTTGTTGTTGGGTTTTGCTTACAAGCTCGGGTTTCGAGCTCTCAAAACCTGACATGCAATCCAAACGATTTGAAGGCACTGGAGGATTTCATGAACGGTATAGATTCTATGATTGATGGGTGGGGTAGCAATTTCTCACCTGATTGCTGCAAATGGGCAGGCATCACTTGCAATTCTTCTTCCTCTCTCGGATTGAACGATTCCATTGATACTTATAGAGTGGTTAAGTTGGAGCTTCCAAAGAGAAGGCTAGTGGGAAATCTCTCTGCATCTTTAGGCACTTTGGACCAGCTTAGAACCCTCAATCTCTCTCAAAATTTCCTCAAACACTCGCTTCCAATTTCGCTTTTCCATTTGCCGAATTTAGAGTTCTTAGACTTGAGCTCTAATGATTTTTCCGGCCCCATTCCTTTCGATATCGAATTGCCTTCAATCCAGTTCCTTGAAATTTCACAAAACTTTTTGAATGGTACCCTTCCGGCTAGCATCTGTGACAAGTCTACTCAGCTTCGAGCACTGAAGTTGGCTGTGAACTACTTCTCTGGTAACCTCCCACCAGGTCTTGGCAATTGTACTTCCTTGGAGGACCTCTGTCTAGGCATGAATAATTTCAATGGCGGTGTGCCCGAAGGTCTATTTCGTCTGCGAAACCTAACCCAGTTGAACATTCAAGATAACAAGCTTTCCGGGGTGCTCAGCGAAGAATTCAGTAACCTCATTAATCTTGTTCGTTTGGATATCTCAACTAATGAATTTTCAGGAACCATCCCAGATGTTTTCCACAGCCTTGGAAGATTACAGAATCTTGTACTTCATTCAAATCGGTTTGGTGGTCGGATACCCCCTTCCTTGTCGAGTTCCTCGACCATCTCTTTGCTTAATTTGAGAAACAATTCATTGCAGGGCACAATTGATCTTAATTGTTCGGCAATGACTAGTTTGACCTCTCTTGATCTCGGTTCCAATCAGTTTGATGGGCCTATTCCCTCCAATCTTCCCTCTTGTCGACATTTGAATAATGTCAATCTTGCCCGTAACAACTTAACGGGCGAAATACCAGAAAGCTTCAAGAGTTTCCCTAGCCTCTCTTACCTCTCGCTGTCAAATTCCAGCCTTTCCAATATCTCTTCTGCCTTACAAATTTTACAGCAGTGCCAGAACCTGACTACTTTGGTTCTCACCTTGAACTTCCGTGGTGAAGAATTTCCTGCTGATCCGACCCTTCATGTTGAAAAGTTGAAGGTTCTTATTATTGCAAACTGTAGGCTCACAGGTGTAATACCTCAATGGTTGAGTACTAGCAGCAGATTGCAATTGTTGGATATATCGTGGAACCAATTGCAAGGAACAATTCCAGTCTGGTTTGGCAATTTTAGCAGTCTTTTCTACTTGGACCTGTCGAATAATTCGTTTACAGGGGAAATCCCTAGAAGCTTAACTGGACTACCGAGCCTCATTAGTGGGAGGATCTCCATTGAGGAACCTTCCCCTGATTTCCCTCTGTTCATGAAGAGGAATGTAAGTGCACGAGGGTTGCAATACAATCAAGTGTGGAGCTTTCCACCGACGCTGGAACTTAGTAACAATAATCTTAGCGGACCAATCTGGCCAGAGTTTGGGAAACTGAAATTGCTTCATGTTTTGGATCTGAAGTGCAACAATCTCTCAGGACCAATACCGAGTACTTTATCTGGTATGACCAGCTTAGAGACTCTGGATTTGTCTCATAACAAGCTTTCAGGTACAATCCCGCCTTCGTTGGTTAAGCTTAGCTTCTTGTCCAAGTTTAATGTTGCGGACAATCAGTTGTACGGGGTGATCCCTACAGGAGTTCAGTTTGGGACCTTCCCAAATTCAAGTTTTGAAGGGAATAATCTTTGCGGCGACCATGCGTCCCCATGTTCATCAAAGAAGCATTATCCTCTTGGGAATCCCAGCAAATCAAGAAAAAATAGAGGAGTTATTGTTGGTATAGCTGTCGGAATTGTATTTGGAACAGCACTTGTTCTTGCGCTCATGTACACAATTTTGGTGCGGGTACATAGCCGGAGAGAGGTTGATCCTGAAAGAGAGGACCACGATACCAACGAGAAGGACTTGGAAGAATCTGGGTCAAAACTAGTGGTTCTGTTCCAAAACAAGGATGCCAATAAAGAGCTCTCTATTGATGACCTTCTACAATCTACCAACAATTTTGACCAAGCAAATATCATCGGTTGTGGGGGTTTTGGTCTGGTTTACAAGGCCAGCCTTCCTGATGGTAAGAAGGTTGCTATCAAGCGGCTTTCTGGTGACTGTGGCCAGATGGACAGAGAATTCCGTGCTGAAGTTGAAACCTTGTCTAGAGCTCAGCATCCAAATCTTGTACATCTTCAGGGGTATTGTAAGTATAAAAGTGACAGGCTCTTGATATATTCTTACATGGAGAATGGTAGTCTGGATTACTGGTTACATGAGAAAATTGATGGTCCGACCTCTCTAGATTGGAATGCGAGGCTTCAGATTGCTCAAGGGGCGGTGAGAGGGCTTGCTTATTTGCACCAGTCATGCGAGCCCCACATCCTTCATCGGGATATAAAGTCAAGCAACATCCTTTTGGATGGGAATTTTAAAGCGCACTTAGCGGATTTTGGTCTTGCAAGGCTGATAGATCGGTATGATACTCATGTAACAACTGATCTTGTTGGGACATTAGGCTACATCCCTCCTGAGTACGGCCAAGCCTCTGTTGCTACTTACAAGGGCGATGTGTACAGTTTCGGGGTTGTTCTTTTGGAGCTGCTCACCGGAAGAAGGCCGATGGATATGTGCAAGCCAAAAGGAAGTCGGGATTTGATCTCGTGGGCATTTCAGATGAAGAGGGAAAAGAGGGAAAGCGAGGTGTTTGATCCTTTCATTTGTGACAAGCAGCACGATGAGGAACTCTTGTGTGTTTTTGAGATTGCATGCCTCTGTTTAAGCGGATGCCCGAAGGTGAGGCCTTCAACGCAGCAGCTAGTTTCGTGGCTCGACAACATCAACACCAAGAAAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

1022

Amino Acids

112.97

Weight (kDa)

6.06

Isoelectric Point (pI)

37.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 68	1e-05	Leucine rich repeat N-terminal domain
LRR_8	PF13855	100 - 142	1.3e-06	Leucine rich repeat
LRR_14	PF23598	151 - 333	6.7e-09	Leucine-rich repeat region
LRR_8	PF13855	226 - 286	4.8e-08	Leucine rich repeat
LRR_8	PF13855	422 - 480	4.4e-10	Leucine rich repeat
LRR_8	PF13855	555 - 613	4.3e-08	Leucine rich repeat
Pkinase	PF00069	744 - 1010	2.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	746 - 967	6.5e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	500
AccB1I	GGYRCC	1 cut(s)	500
AccB7I	CCANNNNNTGG	2 cut(s)	593, 1646
AccI	GTMKAC	2 cut(s)	530, 1036
AclWI	GGATC	6 cut(s)	1238, 1505, 1683, 1843, 2084, 2912
AcoI	YGGCCR	3 cut(s)	1637, 2329, 2746
AcuI	CTGAAG	5 cut(s)	569, 1700, 2376, 2387, 2513
AfiI	CCNNNNNNNGG	7 cut(s)	593, 1646, 2083, 2170, 2599, 2744, 2823
AhdI	GACNNNNNGTC	1 cut(s)	1921
AhlI	ACTAGT	2 cut(s)	965, 2149
AjnI	CCWGG	1 cut(s)	586
Alw21I	GWGCWC	7 cut(s)	71, 416, 547, 726, 1558, 2190, 2380
Alw26I	GTCTC	2 cut(s)	1733, 1758
Alw44I	GTGCAC	1 cut(s)	1554
AlwI	GGATC	6 cut(s)	1238, 1505, 1683, 1843, 2084, 2912
AlwNI	CAGNNNCTG	1 cut(s)	1192
Ama87I	CYCGRG	1 cut(s)	57
AoxI	GGCC	8 cut(s)	430, 1007, 1637, 2274, 2329, 2746, 2825, 3008
ApaLI	GTGCAC	1 cut(s)	1554
ApeKI	GCWGC	6 cut(s)	177, 1332, 2809, 2938, 3019, 3022
ArsI	GACNNNNNNTTYG	4 cut(s)	886, 918, 1732, 1764
AseI	ATTAAT	1 cut(s)	750
Asp700I	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
Asp718I	GGTACC	1 cut(s)	500
AspLEI	GCGC	2 cut(s)	2044, 2647
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	8 cut(s)	159, 1201, 1238, 1858, 2333, 2560, 2806, 3016
AsuNHI	GCTAGC	1 cut(s)	512
AvaI	CYCGRG	1 cut(s)	57
AvaII	GGWCC	8 cut(s)	316, 616, 1423, 1628, 1700, 1872, 2104, 2498
BaeGI	GKGCMC	3 cut(s)	657, 938, 1558
BaeI	ACNNNNGTAYC	2 cut(s)	2682, 2715
BalI	TGGCCA	2 cut(s)	1639, 2331
BanI	GGYRCC	1 cut(s)	500
BanII	GRGCYC	5 cut(s)	71, 416, 2190, 2380, 2586
BauI	CACGAG	2 cut(s)	1557, 2869
Bbv12I	GWGCWC	7 cut(s)	71, 416, 547, 726, 1558, 2190, 2380
BbvI	GCAGC	6 cut(s)	164, 1344, 2796, 2950, 3031, 3034
BccI	CCATC	9 cut(s)	140, 803, 905, 998, 2282, 2329, 2489, 2624, 2824
BceAI	ACGGC	1 cut(s)	2761
BciT130I	CCWGG	1 cut(s)	588
BciVI	GTATCC	1 cut(s)	861
BcnI	CCSGG	1 cut(s)	718
BcoDI	GTCTC	2 cut(s)	1733, 1758
BcuI	ACTAGT	2 cut(s)	965, 2149
BfmI	CTRYAG	2 cut(s)	1291, 1854
BfuI	GTATCC	1 cut(s)	861
BisI	GCNGC	8 cut(s)	178, 1333, 1912, 2312, 2810, 2939, 3020, 3023
BlpI	GCTNAGC	3 cut(s)	725, 1799, 2379
BlsI	GCNGC	8 cut(s)	179, 1334, 1913, 2313, 2811, 2940, 3021, 3024
BmcAI	AGTACT	2 cut(s)	1327, 1714
Bme1390I	CCNGG	2 cut(s)	588, 718
Bme18I	GGWCC	8 cut(s)	316, 616, 1423, 1628, 1700, 1872, 2104, 2498
BmeRI	GACNNNNNGTC	1 cut(s)	1921
BmeT110I	CYCGRG	1 cut(s)	57
BmiI	GGNNCC	7 cut(s)	433, 502, 793, 991, 1364, 1512, 1873
BmrFI	CCNGG	2 cut(s)	588, 718
BmrI	ACTGGG	1 cut(s)	682
BmsI	GCATC	6 cut(s)	201, 308, 525, 2164, 2392, 2984
BmtI	GCTAGC	1 cut(s)	516
BmuI	ACTGGG	1 cut(s)	682
BoxI	GACNNNNGTC	1 cut(s)	621
BpmI	CTGGAG	1 cut(s)	131
Bpu1102I	GCTNAGC	3 cut(s)	725, 1799, 2379
BpuEI	CTTGAG	2 cut(s)	430, 2523
BpuMI	CCSGG	1 cut(s)	718
BsaJI	CCNNGG	4 cut(s)	609, 717, 817, 1222
BsaWI	WCCGGW	1 cut(s)	2816
BsaXI	ACNNNNNCTCC	2 cut(s)	1980, 2010
Bsc4I	CCNNNNNNNGG	7 cut(s)	593, 1646, 2083, 2170, 2599, 2744, 2823
Bse1I	ACTGG	7 cut(s)	114, 466, 688, 1385, 1474, 2480, 2572
Bse3DI	GCAATG	2 cut(s)	926, 966
BseBI	CCWGG	1 cut(s)	588
BseDI	CCNNGG	4 cut(s)	609, 717, 817, 1222
BseGI	GGATG	8 cut(s)	795, 2179, 2383, 2589, 2619, 2635, 2730, 2999
BseLI	CCNNNNNNNGG	7 cut(s)	593, 1646, 2083, 2170, 2599, 2744, 2823
BseMI	GCAATG	2 cut(s)	926, 966
BseMII	CTCAG	5 cut(s)	548, 739, 1710, 2393, 2730
BseNI	ACTGG	7 cut(s)	114, 466, 688, 1385, 1474, 2480, 2572
BseRI	GAGGAG	1 cut(s)	2001
BseSI	GKGCMC	3 cut(s)	657, 938, 1558
BseXI	GCAGC	6 cut(s)	164, 1344, 2796, 2950, 3031, 3034
BseYI	CCCAGC	1 cut(s)	1964
BshFI	GGCC	8 cut(s)	432, 1009, 1639, 2276, 2331, 2748, 2827, 3010
BshNI	GGYRCC	1 cut(s)	500
BsiHKAI	GWGCWC	7 cut(s)	71, 416, 547, 726, 1558, 2190, 2380
BsiHKCI	CYCGRG	1 cut(s)	57
BsiSI	CCGG	5 cut(s)	429, 509, 717, 2077, 2817
BslFI	GGGAC	3 cut(s)	1885, 1909, 2731
BslI	CCNNNNNNNGG	7 cut(s)	593, 1646, 2083, 2170, 2599, 2744, 2823
BsmAI	GTCTC	2 cut(s)	1733, 1758
BsmFI	GGGAC	3 cut(s)	1885, 1909, 2731
BsmI	GAATGC	1 cut(s)	2524
BsnI	GGCC	8 cut(s)	432, 1009, 1639, 2276, 2331, 2748, 2827, 3010
BsoBI	CYCGRG	1 cut(s)	57
Bsp1407I	TGTACA	3 cut(s)	2049, 2395, 2781
Bsp1720I	GCTNAGC	3 cut(s)	725, 1799, 2379
BspANI	GGCC	8 cut(s)	432, 1009, 1639, 2276, 2331, 2748, 2827, 3010
BspCNI	CTCAG	5 cut(s)	547, 738, 1709, 2392, 2731
BspHI	TCATGA	2 cut(s)	120, 1536
BspLI	GGNNCC	7 cut(s)	433, 502, 793, 991, 1364, 1512, 1873
BspOI	GCTAGC	1 cut(s)	516
BspPI	GGATC	6 cut(s)	1238, 1505, 1683, 1843, 2084, 2912
BspT107I	GGYRCC	1 cut(s)	500
BsrDI	GCAATG	2 cut(s)	926, 966
BsrGI	TGTACA	3 cut(s)	2049, 2395, 2781
BsrI	ACTGG	7 cut(s)	114, 466, 688, 1385, 1474, 2480, 2572
BssECI	CCNNGG	4 cut(s)	609, 717, 817, 1222
BssSI	CACGAG	2 cut(s)	1557, 2869
BssT1I	CCWWGG	2 cut(s)	609, 817
Bst2BI	CACGAG	2 cut(s)	1557, 2869
Bst2UI	CCWGG	1 cut(s)	588
Bst4CI	ACNGT	4 cut(s)	128, 1292, 2327, 2786
Bst6I	CTCTTC	3 cut(s)	1162, 1535, 2882
BstAPI	GCANNNNNTGC	1 cut(s)	198
BstAUI	TGTACA	3 cut(s)	2049, 2395, 2781
BstC8I	GCNNGC	7 cut(s)	190, 514, 2278, 2559, 2582, 2843, 2977
BstDSI	CCRYGG	1 cut(s)	1222
BstEII	GGTNACC	1 cut(s)	575
BstF5I	GGATG	8 cut(s)	795, 2179, 2383, 2589, 2619, 2635, 2730, 2999
BstHHI	GCGC	2 cut(s)	2044, 2647
BstMAI	GTCTC	2 cut(s)	1733, 1758
BstMWI	GCNNNNNNNGC	6 cut(s)	198, 1404, 2543, 2651, 2759, 3016
BstNI	CCWGG	1 cut(s)	588
BstNSI	RCATGY	2 cut(s)	87, 2979
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	1 cut(s)	575
BstSCI	CCNGG	2 cut(s)	586, 716
BstSFI	CTRYAG	2 cut(s)	1291, 1854
BstSLI	GKGCMC	3 cut(s)	657, 938, 1558
BstV1I	GCAGC	6 cut(s)	164, 1344, 2796, 2950, 3031, 3034
BstX2I	RGATCY	2 cut(s)	1497, 1675
BstXI	CCANNNNNNTGG	1 cut(s)	818
BstYI	RGATCY	2 cut(s)	1497, 1675
BsuI	GTATCC	1 cut(s)	861
BsuRI	GGCC	8 cut(s)	432, 1009, 1639, 2276, 2331, 2748, 2827, 3010
BtgI	CCRYGG	1 cut(s)	1222
BtgZI	GCGATG	1 cut(s)	2790
BtsCI	GGATG	8 cut(s)	795, 2179, 2383, 2589, 2619, 2635, 2730, 2999
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	3 cut(s)	107, 545, 1187
Cac8I	GCNNGC	7 cut(s)	190, 514, 2278, 2559, 2582, 2843, 2977
CaiI	CAGNNNCTG	1 cut(s)	1192
CciI	TCATGA	2 cut(s)	120, 1536
CfoI	GCGC	2 cut(s)	2044, 2647
CseI	GACGC	2 cut(s)	1606, 1911
CsiI	ACCWGGT	1 cut(s)	586
CspCI	CAANNNNNGTGG	2 cut(s)	2133, 2168
DraI	TTTAAA	1 cut(s)	2641
DriI	GACNNNNNGTC	1 cut(s)	1921
EaeI	YGGCCR	3 cut(s)	1637, 2329, 2746
Eam1104I	CTCTTC	3 cut(s)	1162, 1535, 2882
Eam1105I	GACNNNNNGTC	1 cut(s)	1921
EarI	CTCTTC	3 cut(s)	1162, 1535, 2882
Ecl136II	GAGCTC	4 cut(s)	69, 414, 2188, 2378
Eco130I	CCWWGG	2 cut(s)	609, 817
Eco147I	AGGCCT	1 cut(s)	3010
Eco24I	GRGCYC	5 cut(s)	71, 416, 2190, 2380, 2586
Eco32I	GATATC	2 cut(s)	448, 769
Eco47I	GGWCC	8 cut(s)	316, 616, 1423, 1628, 1700, 1872, 2104, 2498
Eco53kI	GAGCTC	4 cut(s)	69, 414, 2188, 2378
Eco57I	CTGAAG	5 cut(s)	569, 1700, 2376, 2387, 2513
Eco88I	CYCGRG	1 cut(s)	57
Eco91I	GGTNACC	1 cut(s)	575
EcoICRI	GAGCTC	4 cut(s)	69, 414, 2188, 2378
EcoO109I	RGGNCCY	2 cut(s)	616, 1872
EcoO65I	GGTNACC	1 cut(s)	575
EcoRI	GAATTC	2 cut(s)	734, 2345
EcoRII	CCWGG	1 cut(s)	586
EcoRV	GATATC	2 cut(s)	448, 769
EcoT14I	CCWWGG	2 cut(s)	609, 817
EcoT38I	GRGCYC	5 cut(s)	71, 416, 2190, 2380, 2586
ErhI	CCWWGG	2 cut(s)	609, 817
FalI	AAGNNNNNCTT	2 cut(s)	1787, 1819
FaqI	GGGAC	3 cut(s)	1885, 1909, 2731
FauI	CCCGC	2 cut(s)	1788, 2058
FblI	GTMKAC	2 cut(s)	530, 1036
Fnu4HI	GCNGC	8 cut(s)	178, 1333, 1912, 2312, 2810, 2939, 3020, 3023
FokI	GGATG	8 cut(s)	782, 2186, 2370, 2576, 2606, 2642, 2717, 3006
FriOI	GRGCYC	5 cut(s)	71, 416, 2190, 2380, 2586
Fsp4HI	GCNGC	8 cut(s)	178, 1333, 1912, 2312, 2810, 2939, 3020, 3023
GlaI	GCGC	2 cut(s)	2043, 2646
GluI	GCNGC	8 cut(s)	178, 1333, 1912, 2312, 2810, 2939, 3020, 3023
GsaI	CCCAGC	1 cut(s)	1968
GsuI	CTGGAG	1 cut(s)	131
HaeIII	GGCC	8 cut(s)	432, 1009, 1639, 2276, 2331, 2748, 2827, 3010
HapII	CCGG	5 cut(s)	429, 509, 717, 2077, 2817
HgaI	GACGC	2 cut(s)	1606, 1911
HhaI	GCGC	2 cut(s)	2044, 2647
Hin6I	GCGC	2 cut(s)	2042, 2645
HinP1I	GCGC	2 cut(s)	2042, 2645
HincII	GTYRAC	1 cut(s)	1037
HindII	GTYRAC	1 cut(s)	1037
HindIII	AAGCTT	5 cut(s)	710, 1093, 1462, 1763, 1796
HinfI	GANTC	6 cut(s)	134, 230, 832, 1741, 1960, 2135
HpaII	CCGG	5 cut(s)	429, 509, 717, 2077, 2817
HphI	GGTGA	8 cut(s)	159, 1201, 1238, 1858, 2333, 2560, 2806, 3016
Hpy166II	GTNNAC	8 cut(s)	531, 562, 1037, 1443, 1556, 2052, 2269, 2782
Hpy188I	TCNGA	8 cut(s)	221, 867, 1248, 1680, 2012, 2502, 2532, 2883
Hpy8I	GTNNAC	8 cut(s)	531, 562, 1037, 1443, 1556, 2052, 2269, 2782
Hpy99I	CGWCG	1 cut(s)	1600
HpyCH4III	ACNGT	4 cut(s)	128, 1292, 2327, 2786
HpyF10VI	GCNNNNNNNGC	6 cut(s)	198, 1404, 2543, 2651, 2759, 3016
HspAI	GCGC	2 cut(s)	2042, 2645
KpnI	GGTACC	1 cut(s)	504
LmnI	GCTCC	3 cut(s)	262, 1584, 2806
Lsp1109I	GCAGC	6 cut(s)	164, 1344, 2796, 2950, 3031, 3034
LweI	GCATC	6 cut(s)	201, 308, 525, 2164, 2392, 2984
MabI	ACCWGGT	1 cut(s)	586
MfeI	CAATTG	4 cut(s)	598, 939, 1343, 1367
MflI	RGATCY	2 cut(s)	1497, 1675
MlsI	TGGCCA	2 cut(s)	1639, 2331
MluNI	TGGCCA	2 cut(s)	1639, 2331
MlyI	GAGTC	1 cut(s)	1735
MmeI	TCCRAC	6 cut(s)	240, 845, 1271, 1329, 1990, 2525
Mox20I	TGGCCA	2 cut(s)	1639, 2331
MroXI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
MscI	TGGCCA	2 cut(s)	1639, 2331
Msp20I	TGGCCA	2 cut(s)	1639, 2331
MspI	CCGG	5 cut(s)	429, 509, 717, 2077, 2817
MspR9I	CCNGG	2 cut(s)	588, 718
MunI	CAATTG	4 cut(s)	598, 939, 1343, 1367
Mva1269I	GAATGC	1 cut(s)	2524
MvaI	CCWGG	1 cut(s)	588
MwoI	GCNNNNNNNGC	6 cut(s)	198, 1404, 2543, 2651, 2759, 3016
NciI	CCSGG	1 cut(s)	718
NheI	GCTAGC	1 cut(s)	512
NlaIV	GGNNCC	7 cut(s)	433, 502, 793, 991, 1364, 1512, 1873
NmuCI	GTSAC	4 cut(s)	521, 2321, 2426, 2930
NspI	RCATGY	2 cut(s)	87, 2979
PaeI	GCATGC	1 cut(s)	2979
PagI	TCATGA	2 cut(s)	120, 1536
PceI	AGGCCT	1 cut(s)	3010
PcsI	WCGNNNNNNNCGW	4 cut(s)	225, 890, 1436, 2115
PctI	GAATGC	1 cut(s)	2524
PdmI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
PfeI	GAWTC	5 cut(s)	134, 230, 832, 1960, 2135
PflMI	CCANNNNNTGG	2 cut(s)	593, 1646
PkrI	GCNGC	8 cut(s)	179, 1334, 1913, 2313, 2811, 2940, 3021, 3024
PleI	GAGTC	1 cut(s)	1735
PpsI	GAGTC	1 cut(s)	1735
PpuMI	RGGWCCY	2 cut(s)	616, 1872
PshAI	GACNNNNGTC	1 cut(s)	621
PshBI	ATTAAT	1 cut(s)	750
Psp124BI	GAGCTC	4 cut(s)	71, 416, 2190, 2380
Psp5II	RGGWCCY	2 cut(s)	616, 1872
Psp6I	CCWGG	1 cut(s)	586
PspEI	GGTNACC	1 cut(s)	575
PspFI	CCCAGC	1 cut(s)	1964
PspGI	CCWGG	1 cut(s)	586
PspN4I	GGNNCC	7 cut(s)	433, 502, 793, 991, 1364, 1512, 1873
PspPPI	RGGWCCY	2 cut(s)	616, 1872
PstNI	CAGNNNCTG	1 cut(s)	1192
PsuI	RGATCY	2 cut(s)	1497, 1675
SacI	GAGCTC	4 cut(s)	71, 416, 2190, 2380
SalI	GTCGAC	1 cut(s)	1035
SatI	GCNGC	8 cut(s)	178, 1333, 1912, 2312, 2810, 2939, 3020, 3023
ScaI	AGTACT	2 cut(s)	1327, 1714
SchI	GAGTC	1 cut(s)	1735
ScrFI	CCNGG	2 cut(s)	588, 718
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	6 cut(s)	201, 308, 525, 2164, 2392, 2984
SfcI	CTRYAG	2 cut(s)	1291, 1854
SinI	GGWCC	8 cut(s)	316, 616, 1423, 1628, 1700, 1872, 2104, 2498
SmlI	CTYRAG	2 cut(s)	409, 2538
SmoI	CTYRAG	2 cut(s)	409, 2538
SpeI	ACTAGT	2 cut(s)	965, 2149
SphI	GCATGC	1 cut(s)	2979
SseBI	AGGCCT	1 cut(s)	3010
SstI	GAGCTC	4 cut(s)	71, 416, 2190, 2380
StuI	AGGCCT	1 cut(s)	3010
StyD4I	CCNGG	2 cut(s)	586, 716
StyI	CCWWGG	2 cut(s)	609, 817
TaaI	ACNGT	4 cut(s)	128, 1292, 2327, 2786
TaqI	TCGA	9 cut(s)	65, 444, 450, 541, 884, 893, 1036, 1430, 3039
TatI	WGTACW	7 cut(s)	602, 838, 1325, 1712, 2049, 2395, 2781
TauI	GCSGC	2 cut(s)	1914, 2314
TfiI	GAWTC	5 cut(s)	134, 230, 832, 1960, 2135
TscAI	CASTG	3 cut(s)	114, 552, 1187
TseFI	GTSAC	4 cut(s)	521, 2321, 2426, 2930
TseI	GCWGC	6 cut(s)	177, 1332, 2809, 2938, 3019, 3022
Tsp45I	GTSAC	4 cut(s)	521, 2321, 2426, 2930
TspGWI	ACGGA	2 cut(s)	1211, 2339
TspRI	CASTG	3 cut(s)	114, 552, 1187
Van91I	CCANNNNNTGG	2 cut(s)	593, 1646
VneI	GTGCAC	1 cut(s)	1554
VpaK11BI	GGWCC	8 cut(s)	316, 616, 1423, 1628, 1700, 1872, 2104, 2498
VspI	ATTAAT	1 cut(s)	750
XbaI	TCTAGA	2 cut(s)	2372, 2509
XceI	RCATGY	2 cut(s)	87, 2979
XmiI	GTMKAC	2 cut(s)	530, 1036
XmnI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
ZrmI	AGTACT	2 cut(s)	1327, 1714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.