Rmu_sc0009254.1_g000002

Phytosulfokine receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009254.1
Physical Location & Seq
Reverse (-)
7795 .. 8217
423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009254.1_g000002.1.cds

Sequence Viewer

Length: 423 bp
atgggtgttcaagatttctgggtggttctctttgtcattgggttttgcttccagccactagttttgcattcgcataacctgacgtgccatccaaatgatttgtatgcattggtggatttctcgaatagtctgcaaagtgccattggtgggtggggcaagaatttctctgctgattgctgtaaatgggcaggtattacttgcaactcttcgttctctcttggattgaatgattctgttgatacttatagagtggttgagttggatctttcgagtaaaaaactaatcggaaatgtctctgaatctttgggaaatttggaacaacttcgagccctcaatctttctcacaatttccttaaaaaatcacttcctgcttcacttttccaattgccaaatttagagtacttagagcatctccaacagtag

Protein Analysis

140

Amino Acids

15.59

Weight (kDa)

5.61

Isoelectric Point (pI)

29.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 179
AclWI GGATC 1 cut(s) 270
AcsI RAATTY 3 cut(s) 160, 310, 391
AfaI GTAC 1 cut(s) 401
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 2 cut(s) 11, 226
AhlI ACTAGT 1 cut(s) 58
AjiI CACGTC 1 cut(s) 84
Alw26I GTCTC 1 cut(s) 298
AlwI GGATC 1 cut(s) 270
ApoI RAATTY 3 cut(s) 160, 310, 391
Asp700I GAANNNNTTC 1 cut(s) 321
BanII GRGCYC 1 cut(s) 331
BccI CCATC 1 cut(s) 96
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BcoDI GTCTC 1 cut(s) 298
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 1 cut(s) 59
BfuAI ACCTGC 1 cut(s) 179
BmcAI AGTACT 1 cut(s) 401
BmgBI CACGTC 1 cut(s) 84
BmsI GCATC 1 cut(s) 418
Bsc4I CCNNNNNNNGG 1 cut(s) 147
BseGI GGATG 1 cut(s) 88
BseLI CCNNNNNNNGG 1 cut(s) 147
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 298
BsmI GAATGC 1 cut(s) 67
Bsp1286I GDGCHC 1 cut(s) 331
Bsp143I GATC 1 cut(s) 262
BspMI ACCTGC 1 cut(s) 179
BspPI GGATC 1 cut(s) 270
BssMI GATC 1 cut(s) 262
Bst4CI ACNGT 1 cut(s) 420
Bst6I CTCTTC 1 cut(s) 211
BstDEI CTNAG 1 cut(s) 403
BstF5I GGATG 1 cut(s) 88
BstKTI GATC 1 cut(s) 265
BstMAI GTCTC 1 cut(s) 298
BstMBI GATC 1 cut(s) 262
BstX2I RGATCY 1 cut(s) 262
BstYI RGATCY 1 cut(s) 262
BtrI CACGTC 1 cut(s) 84
BtsCI GGATG 1 cut(s) 88
BveI ACCTGC 1 cut(s) 179
Csp6I GTAC 1 cut(s) 400
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviJI RGCY 2 cut(s) 55, 329
CviKI_1 RGCY 2 cut(s) 55, 329
CviQI GTAC 1 cut(s) 400
DdeI CTNAG 1 cut(s) 403
DpnI GATC 1 cut(s) 264
DpnII GATC 1 cut(s) 262
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Eco24I GRGCYC 1 cut(s) 331
EcoT22I ATGCAT 1 cut(s) 109
EcoT38I GRGCYC 1 cut(s) 331
FaiI YATR 3 cut(s) 75, 105, 246
FokI GGATG 1 cut(s) 75
FriOI GRGCYC 1 cut(s) 331
FspBI CTAG 1 cut(s) 59
HinfI GANTC 2 cut(s) 230, 299
Hpy188I TCNGA 2 cut(s) 287, 298
Hpy188III TCNNGA 2 cut(s) 11, 121
HpyCH4III ACNGT 1 cut(s) 420
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 4 cut(s) 67, 107, 133, 201
HpyF3I CTNAG 1 cut(s) 403
HpySE526I ACGT 1 cut(s) 83
Kzo9I GATC 1 cut(s) 262
LpnPI CCDG 5 cut(s) 4, 65, 92, 174, 381
LweI GCATC 1 cut(s) 418
MaeI CTAG 1 cut(s) 59
MaeII ACGT 1 cut(s) 83
MalI GATC 1 cut(s) 264
MboI GATC 1 cut(s) 262
MboII GAAGA 1 cut(s) 198
MfeI CAATTG 1 cut(s) 383
MflI RGATCY 1 cut(s) 262
MhlI GDGCHC 1 cut(s) 331
MluCI AATT 5 cut(s) 160, 310, 346, 383, 391
MmeI TCCRAC 1 cut(s) 240
MnlI CCTC 1 cut(s) 341
Mph1103I ATGCAT 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 321
MseI TTAA 1 cut(s) 354
MslI CAYNNNNRTG 1 cut(s) 93
MunI CAATTG 1 cut(s) 383
Mva1269I GAATGC 1 cut(s) 67
NdeII GATC 1 cut(s) 262
NsiI ATGCAT 1 cut(s) 109
PctI GAATGC 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 2 cut(s) 230, 299
PsuI RGATCY 1 cut(s) 262
RsaI GTAC 1 cut(s) 401
RsaNI GTAC 1 cut(s) 400
RseI CAYNNNNRTG 1 cut(s) 93
SaqAI TTAA 1 cut(s) 354
Sau3AI GATC 1 cut(s) 262
ScaI AGTACT 1 cut(s) 401
SduI GDGCHC 1 cut(s) 331
SetI ASST 3 cut(s) 81, 86, 193
SfaNI GCATC 1 cut(s) 418
SmiMI CAYNNNNRTG 1 cut(s) 93
SpeI ACTAGT 1 cut(s) 58
Sse9I AATT 5 cut(s) 160, 310, 346, 383, 391
SspMI CTAG 1 cut(s) 59
TaaI ACNGT 1 cut(s) 420
TaiI ACGT 1 cut(s) 86
TaqI TCGA 3 cut(s) 122, 269, 325
TasI AATT 5 cut(s) 160, 310, 346, 383, 391
TatI WGTACW 1 cut(s) 399
TfiI GAWTC 2 cut(s) 230, 299
Tru1I TTAA 1 cut(s) 354
Tru9I TTAA 1 cut(s) 354
XapI RAATTY 3 cut(s) 160, 310, 391
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 1 cut(s) 59
ZrmI AGTACT 1 cut(s) 401
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.