Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0041209.1

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

742 .. 3804

Gene Structure 3063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0041209.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3063 bp

atgggtgttcaagatttctgggtggtcatctttgttattgggttttgctcccaagctcagattttgagctctcagaacctgacctgcaatctgaatgatttgaatgcactggaggagttcatgggcggtctgcaaagtgtcattggtcgttggggcaagaatttctctgatgattgctgtatatgggcaggtattacttgcaactcttcatcctctcttggattgaatgattctgttgatacttatagagtggttgagttgaatgtttcgagtaaaaaaataattgggaatctctctgaatctttgggaaagttggaacaacttagagccctcaatctttctcacaacttccttaaaaactcacttcctgcctcactgttccaattgccaaatttaaagtacttagacttgagttctaatgacttttctggccccattccagttgatattaatttgccttcacttctgttccttgatatctctcaaaacttcttgaatggttctattccacaaagcatctgtgcaagttctactaggcttcaggtactgaagttggctgtgaactacttgtctggtactctaccagcaagtcttggaaattgtagttccttggaggacctctgtctcctcacgaataatctctctggtggtgtacctgagggtatatatcggctgcaaagtctgaccagattgaccattcaagataacaagcttactgggccgctgagcaaagaagttggtaacctgattaaccttaatcgtttggatatctcaacgaattggttttcagggtctattcctgatgttttccacagccttggaagattacagtactttgttgctcattccaataatttcagtggtgggatacctccttccttgtcaagttccccaaatatctctttgcttaatgtgagaaacaattcattggagggtccaattgatctaaattgttcagcaatgacaagtttggcctctcttgatctaggttcaaaccagtttgctggggttattccatccaatcttccctcttgtcggcatttgaataatatagatctttcccggaacaacttgagtggccaaatacctgacagcttcaaggattttcatactctcaattacctctcactttcgaactccagccattctaatctatcatctgcccttcaaattttacagcagtgtcagaatctaactactttggttctcaccatgaacttctatgatgaaaaattgcctgctgatccaacaattcattttgcaaagttgaaggttttcattattgcaaacagtaggctccaaggttcaataccccagtggttgagtaagagcagcagattgcagttattggatatatcttggaattccttggaaggtacagttccagcttggtttggcaattttactaatctcttctacttggacatatcaaacaattcttttactggggatatcccgagaagcttaactggactacagagcctcatttattggaatgtttccaaggttcaggaaccttcccctgattttcctcttttccagaaaaagaatgtaagtgcaaggggattgcagtacaatcaagtttggagctttccaccgacgctggcacttggcaacaataatttgagtggacagatctggccagagtttgggaacctgaaatcccttcatgtatttgatgtaaaattcaacaatttatctggaccaattccaagttctcttgctaatatgaccagcttagaggctctggatttgtctcataacaagctttcaggaataatacccagttcactgactcgcctcagttttttgtccaagttcagtgttgcatacaatcaattagaggggccgattcctagtggagttcagtttgggaccttcccaaattcaagctttgaagggaatagtctttgtggtgaccatgctcctccatgtccatcaagggggaatacttctcccgttcaaaccagaaaatcaagaaaaaatgttgcaagcattattggtatagctgttggaactgtgtttggaacggcaattcttcttgctctcatgttcataattgttatgcgagcacatagtcgaagagaagttgatcctgaaaaagagcacgatgcggaagagaagtatttggaagaacttgggtcaaaatcagtggttcttttccataacaaggagagcaataaagaactctctcttgacgaccttctgcaatctaccaacaattttgatcaggcaaatatcattggctgtgggggttttggtctggtttacagagccaccctccctgatggtaagaaggttgcaatcaagcgcttgtctggtgactgtggccagatggatagagaattccgtgctgaagttgaagcactgtcaagagctcagcatccaaatcttgtccatcttcaagggtattgcacatataaaagtgacaggcttttgatatattcttacatggagaacagtagtctcgactattggttacatgaaaagctggacggcgcatcctgtctggattggaatacaaggcttcaaattgctcaaggggcggcaagagggcttgcttatttgcatcaatcatgcgagccccatatcgttcatcgggatattaagtcaagtaatattcttttagatgagaattttaaagcccacttagctgattttggtcttgcaaggctcctgcttccctatgatactcatgtaacaactgatcttgttgggacattgggctacattcctcctgagtatggccaagcctctgttgctacttacaagggtgatatatacagttttggggttgttcttttggagcttctaactggaaaaaggcctatggatatgtgcaagccaaaaggagctcgggatttgatctcttgggtgtttcagatgaagagggagaggagggaaactgaagtgtttgctccagtcatttatgacaagcagagagagccggagcttttgtgtgtttttgagattgcattgctttgcttaagcggatgccctaaggtgagaccttcaactcagcagctagtttcttggctcgataatatcaacatcaaaatctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1020

Amino Acids

112.62

Weight (kDa)

6.26

Isoelectric Point (pI)

37.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	92, 179
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AciI	CCGC	5 cut(s)	126, 722, 2114, 2546, 2991
AclWI	GGATC	2 cut(s)	1238, 2087
AcoI	YGGCCR	4 cut(s)	1078, 1640, 2329, 2746
AcsI	RAATTY	8 cut(s)	160, 391, 1170, 1363, 1685, 1885, 2345, 2635
AcuI	CTGAAG	4 cut(s)	524, 569, 2376, 2928
AfaI	GTAC	7 cut(s)	401, 546, 577, 654, 833, 1378, 1574
AfeI	AGCGCT	1 cut(s)	2312
AfiI	CCNNNNNNNGG	5 cut(s)	1035, 1649, 1943, 2170, 2744
AflII	CTTAAG	1 cut(s)	2986
AjuI	GAANNNNNNNTTGG	2 cut(s)	1699, 1731
AloI	GAACNNNNNNTCC	2 cut(s)	1646, 1678
Alw21I	GWGCWC	5 cut(s)	71, 2074, 2109, 2380, 2857
Alw26I	GTCTC	4 cut(s)	629, 1761, 2471, 3001
AlwI	GGATC	2 cut(s)	1238, 2087
AlwNI	CAGNNNCTG	2 cut(s)	79, 547
Ama87I	CYCGRG	2 cut(s)	1456, 2856
Aor51HI	AGCGCT	1 cut(s)	2312
AoxI	GGCC	9 cut(s)	430, 719, 972, 1078, 1640, 1847, 2329, 2746, 2825
ApeKI	GCWGC	3 cut(s)	673, 1332, 3022
ApoI	RAATTY	8 cut(s)	160, 391, 1170, 1363, 1685, 1885, 2345, 2635
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	2 cut(s)	922, 1274
AspLEI	GCGC	2 cut(s)	2313, 2501
AspS9I	GGNCC	7 cut(s)	431, 616, 719, 935, 1703, 1847, 1875
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	5 cut(s)	1201, 1928, 2333, 2786, 3016
AsuII	TTCGAA	1 cut(s)	1133
AvaI	CYCGRG	2 cut(s)	1456, 2856
AvaII	GGWCC	4 cut(s)	616, 935, 1703, 1875
AxyI	CCTNAGG	2 cut(s)	657, 3000
BaeI	ACNNNNGTAYC	4 cut(s)	536, 569, 2682, 2715
BalI	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
BanII	GRGCYC	5 cut(s)	71, 331, 2380, 2586, 2857
Bbv12I	GWGCWC	5 cut(s)	71, 2074, 2109, 2380, 2857
BbvI	GCAGC	3 cut(s)	660, 1344, 3034
BccI	CCATC	5 cut(s)	1024, 1945, 2282, 2329, 2406
BceAI	ACGGC	2 cut(s)	2046, 2512
BciVI	GTATCC	1 cut(s)	861
BclI	TGATCA	1 cut(s)	2227
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	4 cut(s)	629, 1761, 2471, 3001
BfaI	CTAG	5 cut(s)	534, 986, 1857, 3026, 3061
BfmI	CTRYAG	1 cut(s)	1475
BfoI	RGCGCY	1 cut(s)	2314
BfrI	CTTAAG	1 cut(s)	2986
BfuAI	ACCTGC	2 cut(s)	92, 179
BfuI	GTATCC	1 cut(s)	861
BglII	AGATCT	2 cut(s)	1054, 1635
BisI	GCNGC	5 cut(s)	674, 722, 1333, 2547, 3023
BlpI	GCTNAGC	2 cut(s)	725, 2379
BlsI	GCNGC	5 cut(s)	675, 723, 1334, 2548, 3024
BmcAI	AGTACT	2 cut(s)	401, 833
Bme1390I	CCNGG	1 cut(s)	1063
Bme18I	GGWCC	4 cut(s)	616, 935, 1703, 1875
BmeT110I	CYCGRG	2 cut(s)	1456, 2856
BmgT120I	GGNCC	7 cut(s)	431, 616, 719, 935, 1703, 1847, 1875
BmiI	GGNNCC	8 cut(s)	433, 936, 1298, 1515, 1655, 1848, 1876, 2675
BmrFI	CCNGG	1 cut(s)	1063
BmrI	ACTGGG	4 cut(s)	726, 1309, 1455, 1779
BmsI	GCATC	6 cut(s)	525, 2101, 2392, 2510, 2578, 2984
BmuI	ACTGGG	4 cut(s)	726, 1309, 1455, 1779
BoxI	GACNNNNGTC	1 cut(s)	621
BplI	GAGNNNNNCTC	2 cut(s)	2265, 2297
BpmI	CTGGAG	3 cut(s)	131, 1123, 2904
Bpu1102I	GCTNAGC	2 cut(s)	725, 2379
Bpu14I	TTCGAA	1 cut(s)	1133
BpuEI	CTTGAG	3 cut(s)	430, 1093, 2523
BpuMI	CCSGG	1 cut(s)	1063
BsaI	GGTCTC	1 cut(s)	3001
BsaJI	CCNNGG	5 cut(s)	609, 817, 1300, 1368, 1503
BsaXI	ACNNNNNCTCC	2 cut(s)	2942, 2972
Bsc4I	CCNNNNNNNGG	5 cut(s)	1035, 1649, 1943, 2170, 2744
Bse21I	CCTNAGG	2 cut(s)	657, 3000
Bse3DI	GCAATG	2 cut(s)	966, 2975
BseDI	CCNNGG	5 cut(s)	609, 817, 1300, 1368, 1503
BseGI	GGATG	5 cut(s)	209, 1016, 2383, 2501, 2999
BseLI	CCNNNNNNNGG	5 cut(s)	1035, 1649, 1943, 2170, 2744
BseMI	GCAATG	2 cut(s)	966, 2975
BseMII	CTCAG	8 cut(s)	71, 86, 648, 716, 1816, 2393, 2730, 3032
BseRI	GAGGAG	4 cut(s)	128, 617, 1917, 2911
BseXI	GCAGC	3 cut(s)	660, 1344, 3034
BseYI	CCCAGC	1 cut(s)	1004
BshFI	GGCC	9 cut(s)	432, 721, 974, 1080, 1642, 1849, 2331, 2748, 2827
BsiHKAI	GWGCWC	5 cut(s)	71, 2074, 2109, 2380, 2857
BsiHKCI	CYCGRG	2 cut(s)	1456, 2856
BsiSI	CCGG	2 cut(s)	1063, 2948
BslFI	GGGAC	2 cut(s)	1888, 2731
BslI	CCNNNNNNNGG	5 cut(s)	1035, 1649, 1943, 2170, 2744
BsmAI	GTCTC	4 cut(s)	629, 1761, 2471, 3001
BsmFI	GGGAC	2 cut(s)	1888, 2731
BsmI	GAATGC	1 cut(s)	109
BsnI	GGCC	9 cut(s)	432, 721, 974, 1080, 1642, 1849, 2331, 2748, 2827
Bso31I	GGTCTC	1 cut(s)	3001
BsoBI	CYCGRG	2 cut(s)	1456, 2856
Bsp119I	TTCGAA	1 cut(s)	1133
Bsp1286I	GDGCHC	7 cut(s)	71, 331, 2074, 2109, 2380, 2586, 2857
Bsp143I	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
Bsp1720I	GCTNAGC	2 cut(s)	725, 2379
BspACI	CCGC	5 cut(s)	126, 722, 2114, 2546, 2991
BspANI	GGCC	9 cut(s)	432, 721, 974, 1080, 1642, 1849, 2331, 2748, 2827
BspCNI	CTCAG	8 cut(s)	70, 85, 649, 717, 1815, 2392, 2731, 3031
BspLI	GGNNCC	8 cut(s)	433, 936, 1298, 1515, 1655, 1848, 1876, 2675
BspMI	ACCTGC	2 cut(s)	92, 179
BspPI	GGATC	2 cut(s)	1238, 2087
BspT104I	TTCGAA	1 cut(s)	1133
BspTI	CTTAAG	1 cut(s)	2986
BspTNI	GGTCTC	1 cut(s)	3001
BsrDI	GCAATG	2 cut(s)	966, 2975
BssECI	CCNNGG	5 cut(s)	609, 817, 1300, 1368, 1503
BssMI	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
BssT1I	CCWWGG	5 cut(s)	609, 817, 1300, 1368, 1503
Bst4CI	ACNGT	9 cut(s)	378, 831, 1292, 1381, 2020, 2327, 2370, 2462, 2786
Bst6I	CTCTTC	5 cut(s)	211, 1418, 2077, 2112, 2882
BstAFI	CTTAAG	1 cut(s)	2986
BstBI	TTCGAA	1 cut(s)	1133
BstC8I	GCNNGC	7 cut(s)	1239, 1605, 1993, 2070, 2559, 2582, 2843
BstEII	GGTNACC	2 cut(s)	740, 1916
BstF5I	GGATG	5 cut(s)	209, 1016, 2383, 2501, 2999
BstH2I	RGCGCY	1 cut(s)	2314
BstHHI	GCGC	2 cut(s)	2313, 2501
BstKTI	GATC	9 cut(s)	946, 985, 1057, 1246, 1638, 2095, 2230, 2710, 2868
BstMAI	GTCTC	4 cut(s)	629, 1761, 2471, 3001
BstMBI	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
BstMWI	GCNNNNNNNGC	5 cut(s)	718, 2543, 2651, 2759, 2944
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	2 cut(s)	740, 1916
BstSCI	CCNGG	1 cut(s)	1061
BstSFI	CTRYAG	1 cut(s)	1475
BstV1I	GCAGC	3 cut(s)	660, 1344, 3034
BstX2I	RGATCY	2 cut(s)	1054, 1635
BstXI	CCANNNNNNTGG	2 cut(s)	818, 1004
BstYI	RGATCY	2 cut(s)	1054, 1635
Bsu36I	CCTNAGG	2 cut(s)	657, 3000
BsuI	GTATCC	1 cut(s)	861
BsuRI	GGCC	9 cut(s)	432, 721, 974, 1080, 1642, 1849, 2331, 2748, 2827
BtsCI	GGATG	5 cut(s)	209, 1016, 2383, 2501, 2999
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	9 cut(s)	107, 374, 865, 1187, 1322, 1790, 1828, 2157, 2366
BveI	ACCTGC	2 cut(s)	92, 179
Cac8I	GCNNGC	7 cut(s)	1239, 1605, 1993, 2070, 2559, 2582, 2843
CaiI	CAGNNNCTG	2 cut(s)	79, 547
CfoI	GCGC	2 cut(s)	2313, 2501
Cfr13I	GGNCC	7 cut(s)	431, 616, 719, 935, 1703, 1847, 1875
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	7 cut(s)	400, 545, 576, 653, 832, 1377, 1573
CspCI	CAANNNNNGTGG	4 cut(s)	1057, 1092, 2133, 2168
CviQI	GTAC	7 cut(s)	400, 545, 576, 653, 832, 1377, 1573
DpnI	GATC	9 cut(s)	945, 984, 1056, 1245, 1637, 2094, 2229, 2709, 2867
DpnII	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
DraI	TTTAAA	2 cut(s)	396, 2641
EaeI	YGGCCR	4 cut(s)	1078, 1640, 2329, 2746
Eam1104I	CTCTTC	5 cut(s)	211, 1418, 2077, 2112, 2882
EarI	CTCTTC	5 cut(s)	211, 1418, 2077, 2112, 2882
Ecl136II	GAGCTC	3 cut(s)	69, 2378, 2855
Eco130I	CCWWGG	5 cut(s)	609, 817, 1300, 1368, 1503
Eco147I	AGGCCT	1 cut(s)	2827
Eco24I	GRGCYC	5 cut(s)	71, 331, 2380, 2586, 2857
Eco31I	GGTCTC	1 cut(s)	3001
Eco32I	GATATC	3 cut(s)	478, 769, 1453
Eco47I	GGWCC	4 cut(s)	616, 935, 1703, 1875
Eco47III	AGCGCT	1 cut(s)	2312
Eco53kI	GAGCTC	3 cut(s)	69, 2378, 2855
Eco57I	CTGAAG	4 cut(s)	524, 569, 2376, 2928
Eco81I	CCTNAGG	2 cut(s)	657, 3000
Eco88I	CYCGRG	2 cut(s)	1456, 2856
Eco91I	GGTNACC	2 cut(s)	740, 1916
EcoICRI	GAGCTC	3 cut(s)	69, 2378, 2855
EcoO109I	RGGNCCY	2 cut(s)	616, 1875
EcoO65I	GGTNACC	2 cut(s)	740, 1916
EcoRI	GAATTC	2 cut(s)	1363, 2345
EcoRV	GATATC	3 cut(s)	478, 769, 1453
EcoT14I	CCWWGG	5 cut(s)	609, 817, 1300, 1368, 1503
EcoT38I	GRGCYC	5 cut(s)	71, 331, 2380, 2586, 2857
ErhI	CCWWGG	5 cut(s)	609, 817, 1300, 1368, 1503
FaqI	GGGAC	2 cut(s)	1888, 2731
FbaI	TGATCA	1 cut(s)	2227
Fnu4HI	GCNGC	5 cut(s)	674, 722, 1333, 2547, 3023
FokI	GGATG	5 cut(s)	196, 1003, 2370, 2488, 3006
FriOI	GRGCYC	5 cut(s)	71, 331, 2380, 2586, 2857
Fsp4HI	GCNGC	5 cut(s)	674, 722, 1333, 2547, 3023
FspBI	CTAG	5 cut(s)	534, 986, 1857, 3026, 3061
GlaI	GCGC	2 cut(s)	2312, 2500
GluI	GCNGC	5 cut(s)	674, 722, 1333, 2547, 3023
GsaI	CCCAGC	1 cut(s)	1008
GsuI	CTGGAG	3 cut(s)	131, 1123, 2904
HaeII	RGCGCY	1 cut(s)	2314
HaeIII	GGCC	9 cut(s)	432, 721, 974, 1080, 1642, 1849, 2331, 2748, 2827
HapII	CCGG	2 cut(s)	1063, 2948
HgaI	GACGC	1 cut(s)	1609
HhaI	GCGC	2 cut(s)	2313, 2501
Hin6I	GCGC	2 cut(s)	2311, 2499
HinP1I	GCGC	2 cut(s)	2311, 2499
HindIII	AAGCTT	4 cut(s)	710, 1462, 1766, 1891
HinfI	GANTC	6 cut(s)	230, 289, 299, 1189, 1795, 1852
HpaII	CCGG	2 cut(s)	1063, 2948
HphI	GGTGA	5 cut(s)	1201, 1928, 2333, 2786, 3016
Hpy166II	GTNNAC	5 cut(s)	562, 653, 1631, 1790, 2269
Hpy188I	TCNGA	8 cut(s)	60, 75, 93, 169, 298, 684, 1188, 2883
Hpy8I	GTNNAC	5 cut(s)	562, 653, 1631, 1790, 2269
Hpy99I	CGWCG	1 cut(s)	1603
HpyCH4III	ACNGT	9 cut(s)	378, 831, 1292, 1381, 2020, 2327, 2370, 2462, 2786
HpyF10VI	GCNNNNNNNGC	5 cut(s)	718, 2543, 2651, 2759, 2944
HspAI	GCGC	2 cut(s)	2311, 2499
Ksp22I	TGATCA	1 cut(s)	2227
Kzo9I	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
LmnI	GCTCC	9 cut(s)	53, 1302, 1587, 1930, 2679, 2806, 2852, 2923, 2950
Lsp1109I	GCAGC	3 cut(s)	660, 1344, 3034
LweI	GCATC	6 cut(s)	525, 2101, 2392, 2510, 2578, 2984
MaeI	CTAG	5 cut(s)	534, 986, 1857, 3026, 3061
MaeIII	GTNAC	6 cut(s)	740, 1916, 2321, 2426, 2478, 2698
MalI	GATC	9 cut(s)	945, 984, 1056, 1245, 1637, 2094, 2229, 2709, 2867
MboI	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
MfeI	CAATTG	2 cut(s)	383, 939
MflI	RGATCY	2 cut(s)	1054, 1635
MhlI	GDGCHC	7 cut(s)	71, 331, 2074, 2109, 2380, 2586, 2857
MlsI	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
MluNI	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
MlyI	GAGTC	1 cut(s)	1789
MmeI	TCCRAC	3 cut(s)	294, 1271, 1993
Mox20I	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
MroXI	GAANNNNTTC	2 cut(s)	922, 1274
MscI	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
Msp20I	TGGCCA	4 cut(s)	1080, 1642, 2331, 2748
MspA1I	CMGCKG	1 cut(s)	724
MspCI	CTTAAG	1 cut(s)	2986
MspI	CCGG	2 cut(s)	1063, 2948
MspR9I	CCNGG	1 cut(s)	1063
MunI	CAATTG	2 cut(s)	383, 939
Mva1269I	GAATGC	1 cut(s)	109
MwoI	GCNNNNNNNGC	5 cut(s)	718, 2543, 2651, 2759, 2944
NciI	CCSGG	1 cut(s)	1063
NdeII	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
NlaIV	GGNNCC	8 cut(s)	433, 936, 1298, 1515, 1655, 1848, 1876, 2675
NmuCI	GTSAC	3 cut(s)	1916, 2321, 2426
NspV	TTCGAA	1 cut(s)	1133
PceI	AGGCCT	1 cut(s)	2827
PctI	GAATGC	1 cut(s)	109
PdmI	GAANNNNTTC	2 cut(s)	922, 1274
PfeI	GAWTC	5 cut(s)	230, 289, 299, 1189, 1852
PflMI	CCANNNNNTGG	1 cut(s)	1649
PfoI	TCCNGGA	1 cut(s)	1061
PkrI	GCNGC	5 cut(s)	675, 723, 1334, 2548, 3024
PleI	GAGTC	1 cut(s)	1789
PpsI	GAGTC	1 cut(s)	1789
PpuMI	RGGWCCY	2 cut(s)	616, 1875
PshAI	GACNNNNGTC	1 cut(s)	621
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	3 cut(s)	71, 2380, 2857
Psp5II	RGGWCCY	2 cut(s)	616, 1875
PspEI	GGTNACC	2 cut(s)	740, 1916
PspFI	CCCAGC	1 cut(s)	1004
PspN4I	GGNNCC	8 cut(s)	433, 936, 1298, 1515, 1655, 1848, 1876, 2675
PspPI	GGNCC	7 cut(s)	431, 616, 719, 935, 1703, 1847, 1875
PspPPI	RGGWCCY	2 cut(s)	616, 1875
PstNI	CAGNNNCTG	2 cut(s)	79, 547
PsuI	RGATCY	2 cut(s)	1054, 1635
RsaI	GTAC	7 cut(s)	401, 546, 577, 654, 833, 1378, 1574
RsaNI	GTAC	7 cut(s)	400, 545, 576, 653, 832, 1377, 1573
SacI	GAGCTC	3 cut(s)	71, 2380, 2857
SatI	GCNGC	5 cut(s)	674, 722, 1333, 2547, 3023
Sau3AI	GATC	9 cut(s)	943, 982, 1054, 1243, 1635, 2092, 2227, 2707, 2865
Sau96I	GGNCC	7 cut(s)	431, 616, 719, 935, 1703, 1847, 1875
ScaI	AGTACT	2 cut(s)	401, 833
SchI	GAGTC	1 cut(s)	1789
ScrFI	CCNGG	1 cut(s)	1063
SduI	GDGCHC	7 cut(s)	71, 331, 2074, 2109, 2380, 2586, 2857
SfaNI	GCATC	6 cut(s)	525, 2101, 2392, 2510, 2578, 2984
SfcI	CTRYAG	1 cut(s)	1475
SfuI	TTCGAA	1 cut(s)	1133
SinI	GGWCC	4 cut(s)	616, 935, 1703, 1875
SmlI	CTYRAG	4 cut(s)	409, 1072, 2538, 2986
SmoI	CTYRAG	4 cut(s)	409, 1072, 2538, 2986
SseBI	AGGCCT	1 cut(s)	2827
SsiI	CCGC	5 cut(s)	126, 722, 2114, 2546, 2991
SspI	AATATT	1 cut(s)	2620
SspMI	CTAG	5 cut(s)	534, 986, 1857, 3026, 3061
SstI	GAGCTC	3 cut(s)	71, 2380, 2857
StuI	AGGCCT	1 cut(s)	2827
StyD4I	CCNGG	1 cut(s)	1061
StyI	CCWWGG	5 cut(s)	609, 817, 1300, 1368, 1503
TaaI	ACNGT	9 cut(s)	378, 831, 1292, 1381, 2020, 2327, 2370, 2462, 2786
TaqI	TCGA	5 cut(s)	269, 1133, 2080, 2469, 3039
TatI	WGTACW	3 cut(s)	399, 831, 1572
TauI	GCSGC	2 cut(s)	724, 2549
TfiI	GAWTC	5 cut(s)	230, 289, 299, 1189, 1852
TscAI	CASTG	9 cut(s)	114, 381, 865, 1187, 1322, 1797, 1828, 2157, 2373
TseFI	GTSAC	3 cut(s)	1916, 2321, 2426
TseI	GCWGC	3 cut(s)	673, 1332, 3022
Tsp45I	GTSAC	3 cut(s)	1916, 2321, 2426
TspGWI	ACGGA	1 cut(s)	2339
TspRI	CASTG	9 cut(s)	114, 381, 865, 1187, 1322, 1797, 1828, 2157, 2373
Van91I	CCANNNNNTGG	1 cut(s)	1649
Vha464I	CTTAAG	1 cut(s)	2986
VpaK11BI	GGWCC	4 cut(s)	616, 935, 1703, 1875
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	8 cut(s)	160, 391, 1170, 1363, 1685, 1885, 2345, 2635
XmnI	GAANNNNTTC	2 cut(s)	922, 1274
XspI	CTAG	5 cut(s)	534, 986, 1857, 3026, 3061
ZrmI	AGTACT	2 cut(s)	401, 833

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.