Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

64078954 .. 64081041

Gene Structure 2088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG437900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGGTGTTCAAGATTTCTGGGTGGTTCTCTTTGTCATTGGATTTTGCTTCCAGCCACTAGTTTTGCGTTCTCATAACCTGACGTGCCATCCAAATGATTTGTATGCATTGTTGGATTTCTCGAGTAGTCTGCAAAGTGCCATTGGTGGGTGGGGCAAGAATTTCTCTGCTGATTGCTGTAAATGGGCAGGTATTACTTGCAACTCTTCGTTCTCTCTTGGATTGAATGATTCTGTTGATACTTATAGAGTGGTTGAGTTGGGTCTTTCGAGTAAAAAACTAATCGGAAATGTCTCTGAATCTTTGGGAAATTTGGAACAACTTCGAGCCCTCAATCTTTCTCACAATTTCCTTAAAAACTCACTTCCTGCTTCACTTTTCCAATTGCCAAATTTAGAGTACTTAGACTTGAGTTTTAATGACTTGTCTGGCCCCATTCCAGTTGATTTCAATTTACCTTCACTTCTGTTCCTTGACATCTCTCAAAATTACTTTAATGGTTCTATTCCACAAAGCATCTGCGCAAATTCTATTAGGCTTCAGGTACTGAAGTTGGCTGTGAACTACTTGTCTGGTAATCTACCACCAAGTCTTGGAAATTGTAGTTCCTTGGAGGACCTAAGTCTTCTCACGAATAATCTCTCCGGTGGTGTACCTGAGGGTATATATCAGCTGCAAAATCTGACCAGATTAACTATTCAAGATAACAAGCTTACTGGGCCACTGAGCAAAGAAGTTGGTAAGCTGATTAACCTTAATCGTTTGGATATCTCAGCGAATTGGTTTTCAGGGACTATTCCTGATGTTTTCCACAGCCTTGGAAGATTACAGTATTTTGTTGCTCATTCCAATAATTTCAGTGGTCAGATACCCCCTTCCTTGTCAAGTTCCCCAACTATCTCTTTGCTTAATTTGAGAAACAATTCATTGGACGGTCCAATTGATATAAATTGTTCAGCAATGACAAGTTTGGCCTCTCTTGATCTAGGTTCAAACCAGTTTGATGGGGAAATTCCATCCAATCTTCCCTCTTGTCGGCATTTGAATAATATAAATCTTGCCCGGAACAACTTGAGTGGCCAAATACCTGACAGCTTCAAGGATTTTCATACTCTCAATTACCTCTCACTTTCGAACTCCAGCCATTATAATCTGTCATCTGCCCTTCAAATTTTACAGCAGTGTCAGAATCTAACTACTTTGGTTCTCGCCATGAACTTCTATGATGAAGAATTACCCGCCGATCCAACCATTCATTTTGCAAAGTTGAAGGTTCTCATTATTACAAACAGTAGGCTCACGGGTTCAATACCCCAGTGGTTGAGTAGGAGCAGCAGATTGCAGTTATTGGATATATCCTGGAACTGCTTGGAAGGTACAATTCCAGCTTGGCTTGGCAATTTTACTGATCTCTTCTTCTTGGATATATCAAACAATTCTTTTAATGGCTATATCCCGAGAAGCTTAACTAAACTACAGAGCCTCATTACTGGGAACATCTCATTTAGGGAACCATCCCCTGATTTTCCTCTTTTCATGAAAAAGAATGCAAGTGCAAGGGGATTGCAGTACAATAAAGTTTGGAGCTTTCCACCGACACTGGATTTCAGCAACAATAATCTTAGCGGACCAATCTGGCCAGCCTTTGGAAACCTGAAAGCGCTTCATGTTTTGAATCTGGGATTCAACAGTCTATCAGGACCAATTCCAAATTATTTATCTGAGGTGACCAACTTGGAGACATTGGATTTGTCTCATAACAAGCTTTCAGGGGAAATACCGCCTTCATTGGTTCGTCTCAGCTTTTTGTCCAAGTTTAGTGTTGCATACAATCAATTGGATGGAGAGATCCCTACAGGAGGTCAGTTTGGGACCTTCCCAAATTCAAGCTTCGAAGGGAATAATAATATTTGCGGTGATTATGCTTCCCCTTGTCCCTCTTTTTCAGAACCACTGCCACAGCCACGGCCACACAGCAAATCAAGAGTAGAATACAAGGGTGTTGTCATTGGAATAGCTATGGGATTTGTATTTGGAGTAGCTTGCTTTATAATAACAGATAGATATGTATGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

695

Amino Acids

76.57

Weight (kDa)

5.81

Isoelectric Point (pI)

37.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 68	1.2e-08	Leucine rich repeat N-terminal domain
LRR_8	PF13855	86 - 142	3.8e-07	Leucine rich repeat
LRR_4	PF12799	107 - 143	1e-05	Leucine Rich repeats (2 copies)
LRR_14	PF23598	151 - 305	4.9e-08	Leucine-rich repeat region
LRR_8	PF13855	422 - 480	4e-07	Leucine rich repeat
LRR_8	PF13855	534 - 589	2.8e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1149, 2051
Acc16I	TGCGCA	1 cut(s)	523
Acc36I	ACCTGC	1 cut(s)	179
AccB7I	CCANNNNNTGG	2 cut(s)	593, 1646
AciI	CCGC	4 cut(s)	1239, 1626, 1781, 1914
AclWI	GGATC	2 cut(s)	1238, 1843
AcoI	YGGCCR	3 cut(s)	1078, 1637, 1967
AcsI	RAATTY	7 cut(s)	160, 310, 391, 526, 1011, 1170, 1882
AcuI	CTGAAG	2 cut(s)	524, 569
AfaI	GTAC	5 cut(s)	401, 546, 654, 1378, 1571
AfeI	AGCGCT	1 cut(s)	1662
AfiI	CCNNNNNNNGG	5 cut(s)	147, 593, 1035, 1646, 1859
AhlI	ACTAGT	1 cut(s)	58
AjiI	CACGTC	1 cut(s)	84
AjnI	CCWGG	1 cut(s)	1358
Alw26I	GTCTC	4 cut(s)	298, 1733, 1758, 1802
AlwI	GGATC	2 cut(s)	1238, 1843
AlwNI	CAGNNNCTG	1 cut(s)	547
Ama87I	CYCGRG	2 cut(s)	121, 1456
Aor51HI	AGCGCT	1 cut(s)	1662
AoxI	GGCC	6 cut(s)	430, 719, 972, 1078, 1637, 1967
ApeKI	GCWGC	2 cut(s)	673, 1332
ApoI	RAATTY	7 cut(s)	160, 310, 391, 526, 1011, 1170, 1882
ArsI	GACNNNNNNTTYG	2 cut(s)	1732, 1764
Asp700I	GAANNNNTTC	2 cut(s)	321, 922
AspLEI	GCGC	2 cut(s)	524, 1663
AspS9I	GGNCC	7 cut(s)	431, 616, 719, 935, 1628, 1700, 1872
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	2 cut(s)	1738, 1928
AsuII	TTCGAA	2 cut(s)	1133, 1893
AvaI	CYCGRG	2 cut(s)	121, 1456
AvaII	GGWCC	5 cut(s)	616, 935, 1628, 1700, 1872
AxyI	CCTNAGG	1 cut(s)	657
BaeI	ACNNNNGTAYC	2 cut(s)	536, 569
BalI	TGGCCA	2 cut(s)	1080, 1639
BanII	GRGCYC	1 cut(s)	331
BbsI	GAAGAC	1 cut(s)	617
BbvI	GCAGC	2 cut(s)	660, 1344
BccI	CCATC	5 cut(s)	96, 998, 1024, 1522, 1835
BceAI	ACGGC	1 cut(s)	1982
BcgI	CGANNNNNNTGC	2 cut(s)	112, 146
BciT130I	CCWGG	1 cut(s)	1360
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	4 cut(s)	298, 1733, 1758, 1802
BcuI	ACTAGT	1 cut(s)	58
BfaI	CTAG	2 cut(s)	59, 986
BfmI	CTRYAG	2 cut(s)	1475, 1854
BfoI	RGCGCY	1 cut(s)	1664
BfuAI	ACCTGC	1 cut(s)	179
BisI	GCNGC	2 cut(s)	674, 1333
BlsI	GCNGC	2 cut(s)	675, 1334
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	2 cut(s)	1063, 1360
Bme18I	GGWCC	5 cut(s)	616, 935, 1628, 1700, 1872
BmeT110I	CYCGRG	2 cut(s)	121, 1456
BmgBI	CACGTC	1 cut(s)	84
BmgT120I	GGNCC	7 cut(s)	431, 616, 719, 935, 1628, 1700, 1872
BmiI	GGNNCC	3 cut(s)	433, 1512, 1873
BmrFI	CCNGG	2 cut(s)	1063, 1360
BmrI	ACTGGG	3 cut(s)	726, 1309, 1500
BmsI	GCATC	1 cut(s)	525
BmuI	ACTGGG	3 cut(s)	726, 1309, 1500
BoxI	GACNNNNGTC	1 cut(s)	621
BpiI	GAAGAC	1 cut(s)	617
BpmI	CTGGAG	1 cut(s)	1123
Bpu14I	TTCGAA	2 cut(s)	1133, 1893
BpuEI	CTTGAG	2 cut(s)	430, 1093
BpuMI	CCSGG	1 cut(s)	1063
BsaJI	CCNNGG	3 cut(s)	609, 817, 1964
BsaWI	WCCGGW	1 cut(s)	644
Bsc4I	CCNNNNNNNGG	5 cut(s)	147, 593, 1035, 1646, 1859
Bse1I	ACTGG	6 cut(s)	440, 721, 997, 1315, 1495, 1605
Bse21I	CCTNAGG	1 cut(s)	657
Bse3DI	GCAATG	1 cut(s)	966
BseBI	CCWGG	1 cut(s)	1360
BseDI	CCNNGG	3 cut(s)	609, 817, 1964
BseGI	GGATG	4 cut(s)	88, 1016, 1514, 1846
BseLI	CCNNNNNNNGG	5 cut(s)	147, 593, 1035, 1646, 1859
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	5 cut(s)	648, 716, 786, 1713, 1813
BseNI	ACTGG	6 cut(s)	440, 721, 997, 1315, 1495, 1605
BseXI	GCAGC	2 cut(s)	660, 1344
BshFI	GGCC	6 cut(s)	432, 721, 974, 1080, 1639, 1969
BsiHKCI	CYCGRG	2 cut(s)	121, 1456
BsiSI	CCGG	2 cut(s)	645, 1063
BslFI	GGGAC	3 cut(s)	805, 1885, 1920
BslI	CCNNNNNNNGG	5 cut(s)	147, 593, 1035, 1646, 1859
BsmAI	GTCTC	4 cut(s)	298, 1733, 1758, 1802
BsmBI	CGTCTC	1 cut(s)	1802
BsmFI	GGGAC	3 cut(s)	805, 1885, 1920
BsmI	GAATGC	1 cut(s)	1552
BsnI	GGCC	6 cut(s)	432, 721, 974, 1080, 1639, 1969
BsoBI	CYCGRG	2 cut(s)	121, 1456
Bsp119I	TTCGAA	2 cut(s)	1133, 1893
Bsp1286I	GDGCHC	1 cut(s)	331
Bsp143I	GATC	4 cut(s)	982, 1243, 1408, 1848
BspACI	CCGC	4 cut(s)	1239, 1626, 1781, 1914
BspANI	GGCC	6 cut(s)	432, 721, 974, 1080, 1639, 1969
BspCNI	CTCAG	5 cut(s)	649, 717, 785, 1714, 1812
BspHI	TCATGA	1 cut(s)	1536
BspLI	GGNNCC	3 cut(s)	433, 1512, 1873
BspMI	ACCTGC	1 cut(s)	179
BspPI	GGATC	2 cut(s)	1238, 1843
BspT104I	TTCGAA	2 cut(s)	1133, 1893
BsrDI	GCAATG	1 cut(s)	966
BsrI	ACTGG	6 cut(s)	440, 721, 997, 1315, 1495, 1605
BssECI	CCNNGG	3 cut(s)	609, 817, 1964
BssMI	GATC	4 cut(s)	982, 1243, 1408, 1848
BssT1I	CCWWGG	2 cut(s)	609, 817
Bst2UI	CCWGG	1 cut(s)	1360
Bst4CI	ACNGT	4 cut(s)	831, 935, 1292, 1691
Bst6I	CTCTTC	2 cut(s)	211, 1418
BstBI	TTCGAA	2 cut(s)	1133, 1893
BstC8I	GCNNGC	2 cut(s)	1641, 2044
BstDEI	CTNAG	8 cut(s)	403, 620, 657, 725, 772, 1622, 1722, 1799
BstDSI	CCRYGG	1 cut(s)	1964
BstEII	GGTNACC	1 cut(s)	1726
BstENI	CCTNNNNNAGG	1 cut(s)	1857
BstF5I	GGATG	4 cut(s)	88, 1016, 1514, 1846
BstH2I	RGCGCY	1 cut(s)	1664
BstHHI	GCGC	2 cut(s)	524, 1663
BstKTI	GATC	4 cut(s)	985, 1246, 1411, 1851
BstMAI	GTCTC	4 cut(s)	298, 1733, 1758, 1802
BstMBI	GATC	4 cut(s)	982, 1243, 1408, 1848
BstMWI	GCNNNNNNNGC	1 cut(s)	718
BstNI	CCWGG	1 cut(s)	1360
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	1 cut(s)	1726
BstSCI	CCNGG	2 cut(s)	1061, 1358
BstSFI	CTRYAG	2 cut(s)	1475, 1854
BstV1I	GCAGC	2 cut(s)	660, 1344
BstV2I	GAAGAC	1 cut(s)	617
BstX2I	RGATCY	1 cut(s)	1848
BstXI	CCANNNNNNTGG	2 cut(s)	818, 1004
BstYI	RGATCY	1 cut(s)	1848
Bsu36I	CCTNAGG	1 cut(s)	657
BsuRI	GGCC	6 cut(s)	432, 721, 974, 1080, 1639, 1969
BtgI	CCRYGG	1 cut(s)	1964
BtrI	CACGTC	1 cut(s)	84
BtsCI	GGATG	4 cut(s)	88, 1016, 1514, 1846
BtsI	GCAGTG	2 cut(s)	1187, 1952
BtsIMutI	CAGTG	6 cut(s)	722, 865, 1187, 1322, 1598, 1952
BveI	ACCTGC	1 cut(s)	179
Cac8I	GCNNGC	2 cut(s)	1641, 2044
CaiI	CAGNNNCTG	1 cut(s)	547
CciI	TCATGA	1 cut(s)	1536
CfoI	GCGC	2 cut(s)	524, 1663
Cfr13I	GGNCC	7 cut(s)	431, 616, 719, 935, 1628, 1700, 1872
Csp6I	GTAC	5 cut(s)	400, 545, 653, 1377, 1570
CspCI	CAANNNNNGTGG	4 cut(s)	45, 80, 1057, 1092
CviAII	CATG	3 cut(s)	1213, 1537, 1667
CviQI	GTAC	5 cut(s)	400, 545, 653, 1377, 1570
DdeI	CTNAG	8 cut(s)	403, 620, 657, 725, 772, 1622, 1722, 1799
DpnI	GATC	4 cut(s)	984, 1245, 1410, 1850
DpnII	GATC	4 cut(s)	982, 1243, 1408, 1848
EaeI	YGGCCR	3 cut(s)	1078, 1637, 1967
Eam1104I	CTCTTC	2 cut(s)	211, 1418
EarI	CTCTTC	2 cut(s)	211, 1418
Eco130I	CCWWGG	2 cut(s)	609, 817
Eco24I	GRGCYC	1 cut(s)	331
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	5 cut(s)	616, 935, 1628, 1700, 1872
Eco47III	AGCGCT	1 cut(s)	1662
Eco57I	CTGAAG	2 cut(s)	524, 569
Eco81I	CCTNAGG	1 cut(s)	657
Eco88I	CYCGRG	2 cut(s)	121, 1456
Eco91I	GGTNACC	1 cut(s)	1726
EcoNI	CCTNNNNNAGG	1 cut(s)	1857
EcoO109I	RGGNCCY	2 cut(s)	616, 1872
EcoO65I	GGTNACC	1 cut(s)	1726
EcoRII	CCWGG	1 cut(s)	1358
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	2 cut(s)	609, 817
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	1 cut(s)	331
ErhI	CCWWGG	2 cut(s)	609, 817
Esp3I	CGTCTC	1 cut(s)	1802
FaeI	CATG	3 cut(s)	1216, 1540, 1670
FaqI	GGGAC	3 cut(s)	805, 1885, 1920
FatI	CATG	3 cut(s)	1212, 1536, 1666
FauI	CCCGC	1 cut(s)	1246
Fnu4HI	GCNGC	2 cut(s)	674, 1333
FokI	GGATG	4 cut(s)	75, 1003, 1501, 1853
FriOI	GRGCYC	1 cut(s)	331
Fsp4HI	GCNGC	2 cut(s)	674, 1333
FspBI	CTAG	2 cut(s)	59, 986
FspI	TGCGCA	1 cut(s)	523
GlaI	GCGC	2 cut(s)	523, 1662
GluI	GCNGC	2 cut(s)	674, 1333
GsuI	CTGGAG	1 cut(s)	1123
HaeII	RGCGCY	1 cut(s)	1664
HaeIII	GGCC	6 cut(s)	432, 721, 974, 1080, 1639, 1969
HapII	CCGG	2 cut(s)	645, 1063
HhaI	GCGC	2 cut(s)	524, 1663
Hin1II	CATG	3 cut(s)	1216, 1540, 1670
Hin6I	GCGC	2 cut(s)	522, 1661
HinP1I	GCGC	2 cut(s)	522, 1661
HindIII	AAGCTT	4 cut(s)	710, 1462, 1763, 1888
HinfI	GANTC	5 cut(s)	230, 299, 1189, 1675, 1683
HpaII	CCGG	2 cut(s)	645, 1063
HphI	GGTGA	2 cut(s)	1738, 1928
Hpy166II	GTNNAC	2 cut(s)	562, 653
Hpy188I	TCNGA	7 cut(s)	287, 298, 684, 867, 1188, 1723, 1948
Hpy8I	GTNNAC	2 cut(s)	562, 653
HpyAV	CCTTC	8 cut(s)	468, 885, 1175, 1264, 1367, 1794, 1885, 1889
HpyCH4III	ACNGT	4 cut(s)	831, 935, 1292, 1691
HpyCH4IV	ACGT	1 cut(s)	83
HpyF10VI	GCNNNNNNNGC	1 cut(s)	718
HpyF3I	CTNAG	8 cut(s)	403, 620, 657, 725, 772, 1622, 1722, 1799
HpySE526I	ACGT	1 cut(s)	83
Hsp92II	CATG	3 cut(s)	1216, 1540, 1670
HspAI	GCGC	2 cut(s)	522, 1661
Kzo9I	GATC	4 cut(s)	982, 1243, 1408, 1848
LmnI	GCTCC	2 cut(s)	1329, 1584
Lsp1109I	GCAGC	2 cut(s)	660, 1344
LweI	GCATC	1 cut(s)	525
MaeI	CTAG	2 cut(s)	59, 986
MaeII	ACGT	1 cut(s)	83
MaeIII	GTNAC	1 cut(s)	1726
MalI	GATC	4 cut(s)	984, 1245, 1410, 1850
MboI	GATC	4 cut(s)	982, 1243, 1408, 1848
MboII	GAAGA	7 cut(s)	198, 617, 834, 1016, 1241, 1405, 1408
MfeI	CAATTG	3 cut(s)	383, 939, 1835
MflI	RGATCY	1 cut(s)	1848
MhlI	GDGCHC	1 cut(s)	331
MlsI	TGGCCA	2 cut(s)	1080, 1639
MluNI	TGGCCA	2 cut(s)	1080, 1639
MmeI	TCCRAC	2 cut(s)	93, 1271
Mox20I	TGGCCA	2 cut(s)	1080, 1639
Mph1103I	ATGCAT	1 cut(s)	109
MroXI	GAANNNNTTC	2 cut(s)	321, 922
MscI	TGGCCA	2 cut(s)	1080, 1639
MseI	TTAA	9 cut(s)	354, 417, 495, 692, 750, 756, 909, 1443, 1466
MslI	CAYNNNNRTG	1 cut(s)	93
Msp20I	TGGCCA	2 cut(s)	1080, 1639
MspA1I	CMGCKG	1 cut(s)	673
MspI	CCGG	2 cut(s)	645, 1063
MspR9I	CCNGG	2 cut(s)	1063, 1360
MunI	CAATTG	3 cut(s)	383, 939, 1835
Mva1269I	GAATGC	1 cut(s)	1552
MvaI	CCWGG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	1 cut(s)	718
NciI	CCSGG	1 cut(s)	1063
NdeII	GATC	4 cut(s)	982, 1243, 1408, 1848
NlaIII	CATG	3 cut(s)	1216, 1540, 1670
NlaIV	GGNNCC	3 cut(s)	433, 1512, 1873
NmuCI	GTSAC	1 cut(s)	1726
NsbI	TGCGCA	1 cut(s)	523
NsiI	ATGCAT	1 cut(s)	109
NspV	TTCGAA	2 cut(s)	1133, 1893
PaeR7I	CTCGAG	1 cut(s)	121
PagI	TCATGA	1 cut(s)	1536
PctI	GAATGC	1 cut(s)	1552
PdmI	GAANNNNTTC	2 cut(s)	321, 922
PfeI	GAWTC	5 cut(s)	230, 299, 1189, 1675, 1683
PflMI	CCANNNNNTGG	2 cut(s)	593, 1646
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	2 cut(s)	675, 1334
PpuMI	RGGWCCY	2 cut(s)	616, 1872
PshAI	GACNNNNGTC	1 cut(s)	621
PsiI	TTATAA	2 cut(s)	1149, 2051
Psp5II	RGGWCCY	2 cut(s)	616, 1872
Psp6I	CCWGG	1 cut(s)	1358
PspEI	GGTNACC	1 cut(s)	1726
PspGI	CCWGG	1 cut(s)	1358
PspN4I	GGNNCC	3 cut(s)	433, 1512, 1873
PspPI	GGNCC	7 cut(s)	431, 616, 719, 935, 1628, 1700, 1872
PspPPI	RGGWCCY	2 cut(s)	616, 1872
PstNI	CAGNNNCTG	1 cut(s)	547
PsuI	RGATCY	1 cut(s)	1848
PvuII	CAGCTG	1 cut(s)	673
RsaI	GTAC	5 cut(s)	401, 546, 654, 1378, 1571
RsaNI	GTAC	5 cut(s)	400, 545, 653, 1377, 1570
RseI	CAYNNNNRTG	1 cut(s)	93
SaqAI	TTAA	9 cut(s)	354, 417, 495, 692, 750, 756, 909, 1443, 1466
SatI	GCNGC	2 cut(s)	674, 1333
Sau3AI	GATC	4 cut(s)	982, 1243, 1408, 1848
Sau96I	GGNCC	7 cut(s)	431, 616, 719, 935, 1628, 1700, 1872
ScaI	AGTACT	1 cut(s)	401
ScrFI	CCNGG	2 cut(s)	1063, 1360
SduI	GDGCHC	1 cut(s)	331
SfaNI	GCATC	1 cut(s)	525
SfcI	CTRYAG	2 cut(s)	1475, 1854
Sfr274I	CTCGAG	1 cut(s)	121
SfuI	TTCGAA	2 cut(s)	1133, 1893
SinI	GGWCC	5 cut(s)	616, 935, 1628, 1700, 1872
SlaI	CTCGAG	1 cut(s)	121
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	3 cut(s)	121, 409, 1072
SmoI	CTYRAG	3 cut(s)	121, 409, 1072
SpeI	ACTAGT	1 cut(s)	58
SsiI	CCGC	4 cut(s)	1239, 1626, 1781, 1914
SspI	AATATT	1 cut(s)	1909
SspMI	CTAG	2 cut(s)	59, 986
StyD4I	CCNGG	2 cut(s)	1061, 1358
StyI	CCWWGG	2 cut(s)	609, 817
TaaI	ACNGT	4 cut(s)	831, 935, 1292, 1691
TaiI	ACGT	1 cut(s)	86
TaqI	TCGA	5 cut(s)	122, 269, 325, 1133, 1893
TatI	WGTACW	2 cut(s)	399, 1569
TfiI	GAWTC	5 cut(s)	230, 299, 1189, 1675, 1683
Tru1I	TTAA	9 cut(s)	354, 417, 495, 692, 750, 756, 909, 1443, 1466
Tru9I	TTAA	9 cut(s)	354, 417, 495, 692, 750, 756, 909, 1443, 1466
TscAI	CASTG	6 cut(s)	729, 865, 1187, 1322, 1605, 1959
TseFI	GTSAC	1 cut(s)	1726
TseI	GCWGC	2 cut(s)	673, 1332
Tsp45I	GTSAC	1 cut(s)	1726
TspDTI	ATGAA	9 cut(s)	915, 1097, 1229, 1242, 1244, 1525, 1553, 1655, 1776
TspRI	CASTG	6 cut(s)	729, 865, 1187, 1322, 1605, 1959
Van91I	CCANNNNNTGG	2 cut(s)	593, 1646
VpaK11BI	GGWCC	5 cut(s)	616, 935, 1628, 1700, 1872
XagI	CCTNNNNNAGG	1 cut(s)	1857
XapI	RAATTY	7 cut(s)	160, 310, 391, 526, 1011, 1170, 1882
XhoI	CTCGAG	1 cut(s)	121
XmnI	GAANNNNTTC	2 cut(s)	321, 922
XspI	CTAG	2 cut(s)	59, 986
ZrmI	AGTACT	1 cut(s)	401
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.