Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Forward (+)

557426 .. 559498

Gene Structure 2073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1007400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGGTGCTCAGGATTTCTGGGTGGTTATTGTTATTGGCTTTTGCTTCCATGCTCAAATCTTGAGCTCTCAGAACTTGACATGCAATCCCAACGATTTGAAAGCATTGGAGGATTTCATGAACGGTATAGATTCCGTGATTGAAGGGTGGGGCAGCGATTTTTCACCTAATTGCTGTAAATGGGCAGGCATCACTTGCAATTCTTCGTCCTCTCTCGGATTGAACTATTCCATTGATACTTATAGAGTGGTAAAACTGGAGCTTCCAAAGAGAAGGCTACTGGGAAATCTCTCTGCATCTTTAGGGACCTTGGACCAGCTCAGAACCCTCAATCTCTCTCACAATTTCCTCAAGCACTCGCTTCCAGTTTCGCTCTTCCATTTGCCAAATTTAGAGGTTTTAGGCATGAGTTTTAATGACTTTTCTAGCCCCATTCATGTCGATATCGATTTGCCTTCAATCCAGTTCCTTGACATTTCTCAGAACTTTTTGAATGGTTCCCTTCCTGGCAGCATCTGTGACAACAATTCTACTAAACTTCGGGTACTCAACGTGGCCGATAACTGCTTCTCTGGCAATCTTCCACCAGGTTTTGGCAATTGTACTTCCTTGGAGGACCTTGACCTGAGCGCGAATGACCTTACAGGCACAGGTAATGATATATTTCGTCTGCGAAAGCTAACCCAGTTGAACATTCAAGATAACAAGCTGTCAGGGGCCCTCAGCGAAGAATTCGGTAAGCTCATTAACCTTGTTCGTTTGGATATCTCAACTAATGGGTTTTCAGGAACTATCCCAGATGTTTTCTACAGCCTTGGAAGATTACAGAATTTTGTAGCTCATTCAAATCGTTTTGGTGGTCGGATACCCCCTTCTTTGCCGAGTTCATCGACTATCACTTTGCTTAATTTGAGAAACAATTCATTGCAGGGCTCAATTGATCTTAATTGTTCAGCAATGACTAGTTTGACCTCTCTTGATCTCGGTTCCAATCGGTTTGATGGGCCTATTCCCTCCAATCTTCCCTCCTGTCAACATTTGAATACAGTCAATCTTGCCCGTAACAACTTCATTGGCGAAATCCCAGAAAGCTTCAAGAGTTTCCATAGCCTGTCTTACATCTCGCTGTCAAATTGCAGCCTTTCCAATATCTCTTCTTCCCTTCAAATTTTACAGCAGTGTCAGAACCTGACTACTTTGGTTCTCACCTTGAACTTCCGTGGCGAACAATTTCCTGCTGATCCAACCATTCAGTTTGAAAAGCTGAAGATTCTGATTATTGCAAACTGTAGGCTCACAGGTGTAATACCCCAATGGTTGAGTACTAGCAGCAGATTGCAGTTGTTGGATATATCGTGGAACCATTTGGAAGGAACAATTCCAGTCTGGTTTGGCAATTTTAGCAGTCTTTTCTACATGGACGTGTCTAATAATTCCTTAACGGGGGAAATCCCGAGAAGCTTAACTGGACTCCCGAGCCTCATTAATGGGAGGATCTCCATTGAGGAACCTTCCTATGATTTCCCTCTTTTCATGAAGTGGAATGTAAGTGTACGTGGGTTGCAGTACAATCAAGTTTCAAGCTTTCGGCCTACATTGGACTTTAGCAACAACAATCTCAATGGACCAATCTGGCCGGACTTCAGGAAGCTGAGGTTGCTTCATGTTTTGGATTTGAAGAACAACAGATTATCAGGACCGATTCCGAGTAGTTTATCTGAGATGGTGAGCTTGGAGACCCTGGATTTGTCTCATAATGTGCTTTCGGGGATAATCCCACCTTCGTTGGTTAAGCTTAGCTTCCTGTCCAAGTTTAGTGTTGCAGACAATGAATTGTATGGGGTGACCTCTACAGGAGGTCAATTTTCGACCTTCTCAAGTTCAAGTTTTGAAGGGAACAATCTTTGCGGCTACGATGCTGTGCCTTGTCCATCCGGACAGGATGATCCTCTGGGAACATGGTTCGGCAAATCAAGCAAGGATTATACCGGAGTTATTGCTGGAGTGTGTGTCGGATTCGTATTTGGAATAGCATGTTTCATTGGAGTAGATAGGTATGTCTGGACTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

691

Amino Acids

75.75

Weight (kDa)

5.42

Isoelectric Point (pI)

33.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 67	2.1e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	86 - 141	6.1e-06	Leucine rich repeat
LRR_14	PF23598	150 - 308	2.6e-08	Leucine-rich repeat region
LRR_8	PF13855	421 - 480	1.5e-08	Leucine rich repeat
LRR_8	PF13855	445 - 494	1.3e-06	Leucine rich repeat
LRR_8	PF13855	553 - 612	3.6e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	593
AccII	CGCG	1 cut(s)	632
AccIII	TCCGGA	1 cut(s)	1934
AciI	CCGC	1 cut(s)	1908
AclWI	GGATC	3 cut(s)	1235, 1502, 1940
AcoI	YGGCCR	2 cut(s)	555, 1634
AcsI	RAATTY	4 cut(s)	388, 731, 829, 1167
AcuI	CTGAAG	2 cut(s)	1286, 1627
AfaI	GTAC	5 cut(s)	546, 604, 1324, 1554, 1568
AfiI	CCNNNNNNNGG	2 cut(s)	593, 1443
AflIII	ACRYGT	1 cut(s)	1422
AhlI	ACTAGT	1 cut(s)	962
AjiI	CACGTC	1 cut(s)	1423
AjnI	CCWGG	3 cut(s)	505, 586, 1740
Alw21I	GWGCWC	2 cut(s)	10, 68
Alw26I	GTCTC	2 cut(s)	1730, 1755
AlwI	GGATC	3 cut(s)	1235, 1502, 1940
AlwNI	CAGNNNCTG	2 cut(s)	516, 1189
Ama87I	CYCGRG	2 cut(s)	1453, 1474
Aor13HI	TCCGGA	1 cut(s)	1934
AoxI	GGCC	5 cut(s)	555, 717, 1004, 1589, 1634
ApaI	GGGCCC	1 cut(s)	721
ApeKI	GCWGC	4 cut(s)	153, 510, 1137, 1329
ApoI	RAATTY	4 cut(s)	388, 731, 829, 1167
ArsI	GACNNNNNNTTYG	4 cut(s)	883, 915, 1729, 1761
AseI	ATTAAT	1 cut(s)	1485
Asp700I	GAANNNNTTC	2 cut(s)	919, 1230
AspLEI	GCGC	1 cut(s)	632
AspS9I	GGNCC	8 cut(s)	306, 313, 616, 717, 718, 1004, 1625, 1697
AsuHPI	GGTGA	4 cut(s)	156, 1198, 1738, 1855
AvaI	CYCGRG	2 cut(s)	1453, 1474
AvaII	GGWCC	5 cut(s)	306, 313, 616, 1625, 1697
BaeGI	GKGCMC	1 cut(s)	721
BanII	GRGCYC	3 cut(s)	68, 721, 935
Bbv12I	GWGCWC	2 cut(s)	10, 68
BbvCI	CCTCAGC	2 cut(s)	722, 1652
BbvI	GCAGC	4 cut(s)	165, 522, 1149, 1341
BccI	CCATC	3 cut(s)	995, 1717, 1939
BciT130I	CCWGG	3 cut(s)	507, 588, 1742
BciVI	GTATCC	1 cut(s)	858
BcoDI	GTCTC	2 cut(s)	1730, 1755
BcuI	ACTAGT	1 cut(s)	962
BfaI	CTAG	3 cut(s)	426, 963, 1326
BfmI	CTRYAG	3 cut(s)	808, 1288, 1851
BfuI	GTATCC	1 cut(s)	858
BisI	GCNGC	5 cut(s)	154, 511, 1138, 1330, 1909
BlpI	GCTNAGC	1 cut(s)	1796
BlsI	GCNGC	5 cut(s)	155, 512, 1139, 1331, 1910
BmcAI	AGTACT	1 cut(s)	1324
Bme1390I	CCNGG	3 cut(s)	507, 588, 1742
Bme18I	GGWCC	5 cut(s)	306, 313, 616, 1625, 1697
BmeT110I	CYCGRG	2 cut(s)	1453, 1474
BmgBI	CACGTC	1 cut(s)	1423
BmgT120I	GGNCC	8 cut(s)	306, 313, 616, 717, 718, 1004, 1625, 1697
BmiI	GGNNCC	7 cut(s)	307, 499, 718, 719, 988, 1361, 1509
BmrFI	CCNGG	3 cut(s)	507, 588, 1742
BmrI	ACTGGG	2 cut(s)	290, 679
BmsI	GCATC	4 cut(s)	198, 305, 522, 1906
BmuI	ACTGGG	2 cut(s)	290, 679
BpmI	CTGGAG	2 cut(s)	278, 2022
Bpu10I	CCTNAGC	4 cut(s)	9, 626, 722, 1652
Bpu1102I	GCTNAGC	1 cut(s)	1796
BpuEI	CTTGAG	3 cut(s)	82, 335, 1861
Bsa29I	ATCGAT	1 cut(s)	447
BsaAI	YACGTR	1 cut(s)	1556
BsaI	GGTCTC	1 cut(s)	1730
BsaJI	CCNNGG	5 cut(s)	309, 609, 814, 1219, 1740
BsaWI	WCCGGW	2 cut(s)	1934, 1988
BsaXI	ACNNNNNCTCC	2 cut(s)	1995, 2025
Bsc4I	CCNNNNNNNGG	2 cut(s)	593, 1443
Bse1I	ACTGG	7 cut(s)	261, 285, 365, 463, 685, 1382, 1471
Bse3DI	GCAATG	2 cut(s)	923, 963
BseAI	TCCGGA	1 cut(s)	1934
BseBI	CCWGG	3 cut(s)	507, 588, 1742
BseCI	ATCGAT	1 cut(s)	447
BseDI	CCNNGG	5 cut(s)	309, 609, 814, 1219, 1740
BseGI	GGATG	2 cut(s)	1931, 1948
BseLI	CCNNNNNNNGG	2 cut(s)	593, 1443
BseMI	GCAATG	2 cut(s)	923, 963
BseMII	CTCAG	8 cut(s)	23, 83, 334, 494, 617, 736, 1643, 1710
BseNI	ACTGG	7 cut(s)	261, 285, 365, 463, 685, 1382, 1471
BseSI	GKGCMC	1 cut(s)	721
BseXI	GCAGC	4 cut(s)	165, 522, 1149, 1341
Bsh1236I	CGCG	1 cut(s)	632
BshFI	GGCC	5 cut(s)	557, 719, 1006, 1591, 1636
BshVI	ATCGAT	1 cut(s)	447
BsiHKAI	GWGCWC	2 cut(s)	10, 68
BsiHKCI	CYCGRG	2 cut(s)	1453, 1474
BsiSI	CCGG	3 cut(s)	1637, 1935, 1989
BslFI	GGGAC	1 cut(s)	319
BslI	CCNNNNNNNGG	2 cut(s)	593, 1443
BsmAI	GTCTC	2 cut(s)	1730, 1755
BsmFI	GGGAC	1 cut(s)	319
BsnI	GGCC	5 cut(s)	557, 719, 1006, 1591, 1636
Bso31I	GGTCTC	1 cut(s)	1730
BsoBI	CYCGRG	2 cut(s)	1453, 1474
Bsp120I	GGGCCC	1 cut(s)	717
Bsp1286I	GDGCHC	4 cut(s)	10, 68, 721, 935
Bsp13I	TCCGGA	1 cut(s)	1934
Bsp143I	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
Bsp1720I	GCTNAGC	1 cut(s)	1796
BspACI	CCGC	1 cut(s)	1908
BspANI	GGCC	5 cut(s)	557, 719, 1006, 1591, 1636
BspCNI	CTCAG	8 cut(s)	22, 82, 333, 493, 618, 735, 1644, 1711
BspDI	ATCGAT	1 cut(s)	447
BspEI	TCCGGA	1 cut(s)	1934
BspFNI	CGCG	1 cut(s)	632
BspHI	TCATGA	2 cut(s)	117, 1533
BspLI	GGNNCC	7 cut(s)	307, 499, 718, 719, 988, 1361, 1509
BspPI	GGATC	3 cut(s)	1235, 1502, 1940
BspQI	GCTCTTC	1 cut(s)	380
BspTNI	GGTCTC	1 cut(s)	1730
BsrDI	GCAATG	2 cut(s)	923, 963
BsrI	ACTGG	7 cut(s)	261, 285, 365, 463, 685, 1382, 1471
BssECI	CCNNGG	5 cut(s)	309, 609, 814, 1219, 1740
BssMI	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
BssT1I	CCWWGG	3 cut(s)	309, 609, 814
Bst2UI	CCWGG	3 cut(s)	507, 588, 1742
Bst4CI	ACNGT	3 cut(s)	125, 1048, 1289
Bst6I	CTCTTC	2 cut(s)	380, 1159
BstAPI	GCANNNNNTGC	1 cut(s)	195
BstBAI	YACGTR	1 cut(s)	1556
BstC8I	GCNNGC	1 cut(s)	187
BstDEI	CTNAG	9 cut(s)	9, 69, 320, 480, 626, 722, 1652, 1719, 1796
BstDSI	CCRYGG	1 cut(s)	1219
BstEII	GGTNACC	1 cut(s)	1843
BstF5I	GGATG	2 cut(s)	1931, 1948
BstFNI	CGCG	1 cut(s)	632
BstHHI	GCGC	1 cut(s)	632
BstKTI	GATC	5 cut(s)	943, 982, 1243, 1497, 1948
BstMAI	GTCTC	2 cut(s)	1730, 1755
BstMBI	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
BstMWI	GCNNNNNNNGC	5 cut(s)	195, 573, 1401, 1657, 1974
BstNI	CCWGG	3 cut(s)	507, 588, 1742
BstNSI	RCATGY	2 cut(s)	84, 2037
BstPI	GGTNACC	1 cut(s)	1843
BstSCI	CCNGG	3 cut(s)	505, 586, 1740
BstSFI	CTRYAG	3 cut(s)	808, 1288, 1851
BstSLI	GKGCMC	1 cut(s)	721
BstUI	CGCG	1 cut(s)	632
BstV1I	GCAGC	4 cut(s)	165, 522, 1149, 1341
BstX2I	RGATCY	1 cut(s)	1494
BstYI	RGATCY	1 cut(s)	1494
Bsu15I	ATCGAT	1 cut(s)	447
BsuI	GTATCC	1 cut(s)	858
BsuRI	GGCC	5 cut(s)	557, 719, 1006, 1591, 1636
BsuTUI	ATCGAT	1 cut(s)	447
BtgI	CCRYGG	1 cut(s)	1219
BtrI	CACGTC	1 cut(s)	1423
BtsCI	GGATG	2 cut(s)	1931, 1948
BtsI	GCAGTG	1 cut(s)	1184
BtsIMutI	CAGTG	1 cut(s)	1184
Cac8I	GCNNGC	1 cut(s)	187
CaiI	CAGNNNCTG	2 cut(s)	516, 1189
CciI	TCATGA	2 cut(s)	117, 1533
CfoI	GCGC	1 cut(s)	632
Cfr13I	GGNCC	8 cut(s)	306, 313, 616, 717, 718, 1004, 1625, 1697
ClaI	ATCGAT	1 cut(s)	447
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	5 cut(s)	545, 603, 1323, 1553, 1567
CspCI	CAANNNNNGTGG	2 cut(s)	1767, 1802
CviQI	GTAC	5 cut(s)	545, 603, 1323, 1553, 1567
DdeI	CTNAG	9 cut(s)	9, 69, 320, 480, 626, 722, 1652, 1719, 1796
DpnI	GATC	5 cut(s)	942, 981, 1242, 1496, 1947
DpnII	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
EaeI	YGGCCR	2 cut(s)	555, 1634
Eam1104I	CTCTTC	2 cut(s)	380, 1159
EarI	CTCTTC	2 cut(s)	380, 1159
Ecl136II	GAGCTC	1 cut(s)	66
Eco130I	CCWWGG	3 cut(s)	309, 609, 814
Eco24I	GRGCYC	3 cut(s)	68, 721, 935
Eco31I	GGTCTC	1 cut(s)	1730
Eco32I	GATATC	2 cut(s)	445, 766
Eco47I	GGWCC	5 cut(s)	306, 313, 616, 1625, 1697
Eco53kI	GAGCTC	1 cut(s)	66
Eco57I	CTGAAG	2 cut(s)	1286, 1627
Eco88I	CYCGRG	2 cut(s)	1453, 1474
Eco91I	GGTNACC	1 cut(s)	1843
EcoICRI	GAGCTC	1 cut(s)	66
EcoO109I	RGGNCCY	4 cut(s)	306, 616, 717, 718
EcoO65I	GGTNACC	1 cut(s)	1843
EcoRI	GAATTC	1 cut(s)	731
EcoRII	CCWGG	3 cut(s)	505, 586, 1740
EcoRV	GATATC	2 cut(s)	445, 766
EcoT14I	CCWWGG	3 cut(s)	309, 609, 814
EcoT38I	GRGCYC	3 cut(s)	68, 721, 935
ErhI	CCWWGG	3 cut(s)	309, 609, 814
FalI	AAGNNNNNCTT	2 cut(s)	1784, 1816
FaqI	GGGAC	1 cut(s)	319
Fnu4HI	GCNGC	5 cut(s)	154, 511, 1138, 1330, 1909
FokI	GGATG	2 cut(s)	1918, 1955
FriOI	GRGCYC	3 cut(s)	68, 721, 935
Fsp4HI	GCNGC	5 cut(s)	154, 511, 1138, 1330, 1909
FspBI	CTAG	3 cut(s)	426, 963, 1326
GlaI	GCGC	1 cut(s)	631
GluI	GCNGC	5 cut(s)	154, 511, 1138, 1330, 1909
GsuI	CTGGAG	2 cut(s)	278, 2022
HaeIII	GGCC	5 cut(s)	557, 719, 1006, 1591, 1636
HapII	CCGG	3 cut(s)	1637, 1935, 1989
HhaI	GCGC	1 cut(s)	632
Hin6I	GCGC	1 cut(s)	630
HinP1I	GCGC	1 cut(s)	630
HincII	GTYRAC	1 cut(s)	1034
HindII	GTYRAC	1 cut(s)	1034
HindIII	AAGCTT	4 cut(s)	1090, 1459, 1582, 1793
HinfI	GANTC	5 cut(s)	131, 1270, 1470, 1702, 2016
HpaII	CCGG	3 cut(s)	1637, 1935, 1989
HphI	GGTGA	4 cut(s)	156, 1198, 1738, 1855
Hpy166II	GTNNAC	2 cut(s)	1034, 1553
Hpy8I	GTNNAC	2 cut(s)	1034, 1553
HpyCH4III	ACNGT	3 cut(s)	125, 1048, 1289
HpyCH4IV	ACGT	3 cut(s)	552, 1422, 1555
HpyCH4V	TGCA	9 cut(s)	84, 198, 296, 928, 1137, 1283, 1339, 1564, 1823
HpyF10VI	GCNNNNNNNGC	5 cut(s)	195, 573, 1401, 1657, 1974
HpyF3I	CTNAG	9 cut(s)	9, 69, 320, 480, 626, 722, 1652, 1719, 1796
HpySE526I	ACGT	3 cut(s)	552, 1422, 1555
HspAI	GCGC	1 cut(s)	630
Kpn2I	TCCGGA	1 cut(s)	1934
Kzo9I	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
LguI	GCTCTTC	1 cut(s)	380
LmnI	GCTCC	1 cut(s)	259
Lsp1109I	GCAGC	4 cut(s)	165, 522, 1149, 1341
LweI	GCATC	4 cut(s)	198, 305, 522, 1906
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	3 cut(s)	426, 963, 1326
MaeII	ACGT	3 cut(s)	552, 1422, 1555
MaeIII	GTNAC	3 cut(s)	518, 1061, 1843
MalI	GATC	5 cut(s)	942, 981, 1242, 1496, 1947
MboI	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
MfeI	CAATTG	2 cut(s)	598, 936
MflI	RGATCY	1 cut(s)	1494
MhlI	GDGCHC	4 cut(s)	10, 68, 721, 935
MlyI	GAGTC	1 cut(s)	1464
MmeI	TCCRAC	4 cut(s)	842, 1268, 1326, 1993
MroI	TCCGGA	1 cut(s)	1934
MroXI	GAANNNNTTC	2 cut(s)	919, 1230
MseI	TTAA	8 cut(s)	414, 747, 906, 945, 1439, 1463, 1485, 1791
MslI	CAYNNNNRTG	1 cut(s)	1421
MspI	CCGG	3 cut(s)	1637, 1935, 1989
MspR9I	CCNGG	3 cut(s)	507, 588, 1742
MunI	CAATTG	2 cut(s)	598, 936
MvaI	CCWGG	3 cut(s)	507, 588, 1742
MvnI	CGCG	1 cut(s)	632
MwoI	GCNNNNNNNGC	5 cut(s)	195, 573, 1401, 1657, 1974
NdeII	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
NlaIV	GGNNCC	7 cut(s)	307, 499, 718, 719, 988, 1361, 1509
NmeAIII	GCCGAG	1 cut(s)	906
NmuCI	GTSAC	2 cut(s)	518, 1843
NspI	RCATGY	2 cut(s)	84, 2037
PagI	TCATGA	2 cut(s)	117, 1533
PciSI	GCTCTTC	1 cut(s)	380
PdmI	GAANNNNTTC	2 cut(s)	919, 1230
PfeI	GAWTC	4 cut(s)	131, 1270, 1702, 2016
PflMI	CCANNNNNTGG	1 cut(s)	593
PkrI	GCNGC	5 cut(s)	155, 512, 1139, 1331, 1910
PleI	GAGTC	1 cut(s)	1464
PpsI	GAGTC	1 cut(s)	1464
Ppu21I	YACGTR	1 cut(s)	1556
PpuMI	RGGWCCY	2 cut(s)	306, 616
PshBI	ATTAAT	1 cut(s)	1485
Psp124BI	GAGCTC	1 cut(s)	68
Psp5II	RGGWCCY	2 cut(s)	306, 616
Psp6I	CCWGG	3 cut(s)	505, 586, 1740
PspEI	GGTNACC	1 cut(s)	1843
PspGI	CCWGG	3 cut(s)	505, 586, 1740
PspN4I	GGNNCC	7 cut(s)	307, 499, 718, 719, 988, 1361, 1509
PspOMI	GGGCCC	1 cut(s)	717
PspPI	GGNCC	8 cut(s)	306, 313, 616, 717, 718, 1004, 1625, 1697
PspPPI	RGGWCCY	2 cut(s)	306, 616
PstNI	CAGNNNCTG	2 cut(s)	516, 1189
PsuI	RGATCY	1 cut(s)	1494
RsaI	GTAC	5 cut(s)	546, 604, 1324, 1554, 1568
RsaNI	GTAC	5 cut(s)	545, 603, 1323, 1553, 1567
RseI	CAYNNNNRTG	1 cut(s)	1421
SacI	GAGCTC	1 cut(s)	68
SapI	GCTCTTC	1 cut(s)	380
SaqAI	TTAA	8 cut(s)	414, 747, 906, 945, 1439, 1463, 1485, 1791
SatI	GCNGC	5 cut(s)	154, 511, 1138, 1330, 1909
Sau3AI	GATC	5 cut(s)	940, 979, 1240, 1494, 1945
Sau96I	GGNCC	8 cut(s)	306, 313, 616, 717, 718, 1004, 1625, 1697
ScaI	AGTACT	1 cut(s)	1324
SchI	GAGTC	1 cut(s)	1464
ScrFI	CCNGG	3 cut(s)	507, 588, 1742
SduI	GDGCHC	4 cut(s)	10, 68, 721, 935
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	4 cut(s)	198, 305, 522, 1906
SfcI	CTRYAG	3 cut(s)	808, 1288, 1851
SinI	GGWCC	5 cut(s)	306, 313, 616, 1625, 1697
SmiMI	CAYNNNNRTG	1 cut(s)	1421
SmlI	CTYRAG	3 cut(s)	61, 350, 1876
SmoI	CTYRAG	3 cut(s)	61, 350, 1876
SpeI	ACTAGT	1 cut(s)	962
SsiI	CCGC	1 cut(s)	1908
SspMI	CTAG	3 cut(s)	426, 963, 1326
SstI	GAGCTC	1 cut(s)	68
StyD4I	CCNGG	3 cut(s)	505, 586, 1740
StyI	CCWWGG	3 cut(s)	309, 609, 814
TaaI	ACNGT	3 cut(s)	125, 1048, 1289
TaiI	ACGT	3 cut(s)	555, 1425, 1558
TaqI	TCGA	4 cut(s)	441, 447, 890, 1868
TaqII	GACCGA	1 cut(s)	1714
TatI	WGTACW	3 cut(s)	602, 1322, 1566
TauI	GCSGC	1 cut(s)	1911
TfiI	GAWTC	4 cut(s)	131, 1270, 1702, 2016
Tru1I	TTAA	8 cut(s)	414, 747, 906, 945, 1439, 1463, 1485, 1791
Tru9I	TTAA	8 cut(s)	414, 747, 906, 945, 1439, 1463, 1485, 1791
TscAI	CASTG	1 cut(s)	1184
TseFI	GTSAC	2 cut(s)	518, 1843
TseI	GCWGC	4 cut(s)	153, 510, 1137, 1329
Tsp45I	GTSAC	2 cut(s)	518, 1843
TspGWI	ACGGA	2 cut(s)	124, 1208
TspRI	CASTG	1 cut(s)	1184
Van91I	CCANNNNNTGG	1 cut(s)	593
VpaK11BI	GGWCC	5 cut(s)	306, 313, 616, 1625, 1697
VspI	ATTAAT	1 cut(s)	1485
XapI	RAATTY	4 cut(s)	388, 731, 829, 1167
XceI	RCATGY	2 cut(s)	84, 2037
XmnI	GAANNNNTTC	2 cut(s)	919, 1230
XspI	CTAG	3 cut(s)	426, 963, 1326
ZrmI	AGTACT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.