Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

33373611 .. 33376550

Gene Structure 2940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36411.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAGTGTTCAAGATGTCTGGGTGGTTATCTTTGTCATTGGGTTCTTCTTCCAACCACCAACTTTGAGCTGTCAGAACCTGACATGCCATCCAAATGATTTGGATGCATTGGAGGATTTCTTGAATGGTCTGCTAAGTGTCATTGGTGGTTGGAGTAGGAATTTCTCTGACGATTGCTGTAAATGGGCAGGTATCACTTGCAACTCTTCCTTCTCTCTTGGATTGAACAGTTCTGTTGATACGTATAGAGTGGTTGAGTTGGATCTTTCCAGCAAAAGACTAATTGGGAATCTGTCTGAATCTTTGGGAAACTTGAAACAACTTAGAGCCCTCAATCTTTCTCGCAATTTCCTCAAAAACACACTTCCTGTTTCACTGTTCCAACTGCCAAATTTAGAGTACTTAGACTTGAGTTCTAATTACTTTTCTGGCCCCATCCCAGTTGGTTTCAATTTACCTTCAGTTCAGTACGTCGATATGTCTCACAACTACTTGAATGGTTCCTTACCAAACAGCATGTGTGGCAAGTTTACTCGGCTTCAAGTACTGAAATTGGCTGTCAACTACTTTTCTGGTGACCTTCCCCCAGGTCTTGCCAATTGTAGTTCCTTGGAGGCCATCCATCTCAGCACAAACTATCTCTCTGGTGGTGTACCTGAAGGTATATATCAGCTGCAGAAACTGACCAGATTGACCATTCAAGATAACAAGCTTACCGGGACGCTGAGCAAAGAAGTCGGTAACCTGATTAACCTTGTTTGTTTGGATATCTCGAGTAATTGGTTTTCAGGAATAATCCCAGATGTTTTCCACAGCCTTCGAAGATTACAGTATTTTGTTGCTCATTCCAATAACTTGAGTGGCAAGATACCCCCTTCCCTGTCAAGTTCTCCAACCATCTCTTTGCTGAATGTGAGAAACAATTCACTGGACGGTCCAGTTTATCTAAATTGTTCAGCAATGACAAGTTTGACCTCTCTTAATCTAGGTTCAAACCAGTTTGATGGAGTTATTCCATCGAATCTCCCCTCTTGTCGGCGTTTGAGAAAAATAGATCTTGCCCGGAACAACTTAAGTGGCCAAATTCCTGACAGCTTCAAGGATTTTCATACTCTTCATTACCTCTCACTTTCAAATGCCAGCCTTTCCAATATATCATCTGCCTTTGAAATTTTACACCAGTGTCGGAATCTAACCACTTTGGTTCTCACCATGAACTTCTATGATGAAGATTTGCCAGCTGATCCAACCCTTCATTTCGCAAGGTTGAAGGTTCTCGTTATTGCAAACTGTCGGCTCACAGGTTCAATACCCCAGTGGTTGAGTAAGAGCAGCAGATTGCAATTATTAGATATATCCTGGAACTGCCTGAAAGGTACAGTTCCAGCTTGGTTTGGCAATTTTACTTATCTATTCTACTTGGACATATCAAACAACTCTTTTACTGGGGACATACCGAGAAGCTTAACCGGACTAGAGAGCCTCATTGATGGGAAATTTTTCTCAGCTCAAGAACATTCTCCTGAGTTTCCATTTTTTCAGAAGAAGAATGTGAGCGCAAGGGGATTGCAGTACAATCAAGTTTGGAGCTTTCCACCGACTCTGGCACTAAACAACAATAATTTCAGTGGACAGGTTTGGCCAGAGTTTGGGAACCTGAAATCCCTTCATGTATTGGATCTAAAATTCAACAATTTATCTGGACCTATTCCAAGTTCTCTTGCTAATATGATCAACTTAGAGACTCTGGATTTGTCTCATAACAAGCTTTCAGGAATAATACCAAGTTCACTGACTGGCCTCAGTTTCTTGTCCAAGTTCAATGTTGCAGACAATCAATTAGAGGGGAATATTCCTTATGGAGGTCAGTTTGGGACCTTCCCAGATTCAAGCTTTGGTGACCTTGCACCTCCAAGTCCAAAGGCAGACTGCAAGGGACGAGAATCCGGGTTTTTGCCTTTGGAAAATCTGGGTTTGAAGATTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

663

Amino Acids

73.02

Weight (kDa)

6.46

Isoelectric Point (pI)

35.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 68	2e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	85 - 141	2.1e-07	Leucine rich repeat
LRR_14	PF23598	153 - 363	4.1e-08	Leucine-rich repeat region
LRR_8	PF13855	323 - 379	2.5e-07	Leucine rich repeat
LRR_8	PF13855	422 - 480	9.5e-08	Leucine rich repeat
LRR_8	PF13855	555 - 614	7e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	179
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AclWI	GGATC	3 cut(s)	270, 1238, 1686
AcoI	YGGCCR	2 cut(s)	1078, 1640
AcsI	RAATTY	6 cut(s)	160, 391, 1083, 1170, 1496, 1685
AcuI	CTGAAG	2 cut(s)	444, 678
AfaI	GTAC	6 cut(s)	401, 470, 546, 654, 1378, 1574
AfiI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
AflII	CTTAAG	1 cut(s)	1072
AjnI	CCWGG	2 cut(s)	586, 1358
AloI	GAACNNNNNNTCC	2 cut(s)	1646, 1678
Alw26I	GTCTC	3 cut(s)	486, 1736, 1761
AlwI	GGATC	3 cut(s)	270, 1238, 1686
AlwNI	CAGNNNCTG	2 cut(s)	79, 682
Ama87I	CYCGRG	1 cut(s)	772
AoxI	GGCC	5 cut(s)	430, 615, 1078, 1640, 1798
ApeKI	GCWGC	2 cut(s)	673, 1332
ApoI	RAATTY	6 cut(s)	160, 391, 1083, 1170, 1496, 1685
ArsI	GACNNNNNNTTYG	2 cut(s)	1735, 1767
AseI	ATTAAT	1 cut(s)	1983
Asp700I	GAANNNNTTC	2 cut(s)	922, 1499
AspLEI	GCGC	1 cut(s)	1559
AspS9I	GGNCC	4 cut(s)	431, 935, 1703, 1875
AsuC2I	CCSGG	3 cut(s)	718, 1063, 1948
AsuHPI	GGTGA	3 cut(s)	587, 1201, 1910
AsuII	TTCGAA	1 cut(s)	820
AvaI	CYCGRG	1 cut(s)	772
AvaII	GGWCC	3 cut(s)	935, 1703, 1875
BalI	TGGCCA	2 cut(s)	1080, 1642
BanII	GRGCYC	1 cut(s)	331
BbvI	GCAGC	2 cut(s)	660, 1344
BccI	CCATC	8 cut(s)	96, 443, 626, 630, 905, 998, 1024, 1484
BcgI	CGANNNNNNTGC	2 cut(s)	718, 752
BciT130I	CCWGG	2 cut(s)	588, 1360
BclI	TGATCA	1 cut(s)	1731
BcnI	CCSGG	3 cut(s)	718, 1063, 1948
BcoDI	GTCTC	3 cut(s)	486, 1736, 1761
BfaI	CTAG	2 cut(s)	986, 1475
BfmI	CTRYAG	1 cut(s)	674
BfrI	CTTAAG	1 cut(s)	1072
BfuAI	ACCTGC	1 cut(s)	179
BglII	AGATCT	1 cut(s)	1054
BisI	GCNGC	2 cut(s)	674, 1333
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	2 cut(s)	675, 1334
BmcAI	AGTACT	2 cut(s)	401, 546
Bme1390I	CCNGG	5 cut(s)	588, 718, 1063, 1360, 1948
Bme18I	GGWCC	3 cut(s)	935, 1703, 1875
BmeT110I	CYCGRG	1 cut(s)	772
BmgT120I	GGNCC	4 cut(s)	431, 935, 1703, 1875
BmiI	GGNNCC	4 cut(s)	433, 502, 1655, 1876
BmrFI	CCNGG	5 cut(s)	588, 718, 1063, 1360, 1948
BmrI	ACTGGG	3 cut(s)	434, 1309, 1455
BmsI	GCATC	1 cut(s)	94
BmuI	ACTGGG	3 cut(s)	434, 1309, 1455
Bpu1102I	GCTNAGC	1 cut(s)	725
Bpu14I	TTCGAA	1 cut(s)	820
BpuEI	CTTGAG	3 cut(s)	430, 877, 1494
BpuMI	CCSGG	3 cut(s)	718, 1063, 1948
BsaAI	YACGTR	1 cut(s)	243
BsaJI	CCNNGG	2 cut(s)	586, 609
BsaWI	WCCGGW	1 cut(s)	1469
Bsc4I	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
Bse1I	ACTGG	8 cut(s)	440, 933, 938, 997, 1180, 1315, 1450, 1801
Bse3DI	GCAATG	1 cut(s)	966
BseBI	CCWGG	2 cut(s)	588, 1360
BseDI	CCNNGG	2 cut(s)	586, 609
BseGI	GGATG	4 cut(s)	88, 109, 435, 618
BseLI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	5 cut(s)	640, 716, 1515, 1518, 1816
BseNI	ACTGG	8 cut(s)	440, 933, 938, 997, 1180, 1315, 1450, 1801
BseXI	GCAGC	2 cut(s)	660, 1344
BshFI	GGCC	5 cut(s)	432, 617, 1080, 1642, 1800
BsiHKCI	CYCGRG	1 cut(s)	772
BsiSI	CCGG	4 cut(s)	717, 1063, 1470, 1947
BslFI	GGGAC	4 cut(s)	733, 1463, 1888, 1950
BslI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
BsmAI	GTCTC	3 cut(s)	486, 1736, 1761
BsmFI	GGGAC	4 cut(s)	733, 1463, 1888, 1950
BsnI	GGCC	5 cut(s)	432, 617, 1080, 1642, 1800
BsoBI	CYCGRG	1 cut(s)	772
Bsp119I	TTCGAA	1 cut(s)	820
Bsp1286I	GDGCHC	1 cut(s)	331
Bsp143I	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
Bsp1720I	GCTNAGC	1 cut(s)	725
BspANI	GGCC	5 cut(s)	432, 617, 1080, 1642, 1800
BspCNI	CTCAG	5 cut(s)	639, 717, 1516, 1517, 1815
BspLI	GGNNCC	4 cut(s)	433, 502, 1655, 1876
BspMAI	CTGCAG	1 cut(s)	678
BspMI	ACCTGC	1 cut(s)	179
BspPI	GGATC	3 cut(s)	270, 1238, 1686
BspT104I	TTCGAA	1 cut(s)	820
BspTI	CTTAAG	1 cut(s)	1072
BsrDI	GCAATG	1 cut(s)	966
BsrI	ACTGG	8 cut(s)	440, 933, 938, 997, 1180, 1315, 1450, 1801
BssECI	CCNNGG	2 cut(s)	586, 609
BssMI	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
BssT1I	CCWWGG	1 cut(s)	609
Bst2UI	CCWGG	2 cut(s)	588, 1360
Bst4CI	ACNGT	6 cut(s)	230, 378, 831, 935, 1292, 1381
Bst6I	CTCTTC	2 cut(s)	211, 1119
BstAFI	CTTAAG	1 cut(s)	1072
BstBAI	YACGTR	1 cut(s)	243
BstBI	TTCGAA	1 cut(s)	820
BstC8I	GCNNGC	2 cut(s)	1141, 1239
BstDEI	CTNAG	9 cut(s)	134, 323, 403, 626, 725, 1504, 1524, 1738, 1802
BstEII	GGTNACC	3 cut(s)	575, 740, 1898
BstENI	CCTNNNNNAGG	1 cut(s)	1860
BstF5I	GGATG	4 cut(s)	88, 109, 435, 618
BstHHI	GCGC	1 cut(s)	1559
BstKTI	GATC	5 cut(s)	265, 1057, 1246, 1681, 1734
BstMAI	GTCTC	3 cut(s)	486, 1736, 1761
BstMBI	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
BstMWI	GCNNNNNNNGC	1 cut(s)	522
BstNI	CCWGG	2 cut(s)	588, 1360
BstNSI	RCATGY	2 cut(s)	87, 520
BstPI	GGTNACC	3 cut(s)	575, 740, 1898
BstSCI	CCNGG	5 cut(s)	586, 716, 1061, 1358, 1946
BstSFI	CTRYAG	1 cut(s)	674
BstSNI	TACGTA	1 cut(s)	243
BstV1I	GCAGC	2 cut(s)	660, 1344
BstX2I	RGATCY	3 cut(s)	262, 1054, 1678
BstXI	CCANNNNNNTGG	1 cut(s)	1004
BstYI	RGATCY	3 cut(s)	262, 1054, 1678
BsuRI	GGCC	5 cut(s)	432, 617, 1080, 1642, 1800
BtsCI	GGATG	4 cut(s)	88, 109, 435, 618
BtsIMutI	CAGTG	6 cut(s)	374, 926, 1187, 1322, 1633, 1790
BveI	ACCTGC	1 cut(s)	179
Cac8I	GCNNGC	2 cut(s)	1141, 1239
CaiI	CAGNNNCTG	2 cut(s)	79, 682
CfoI	GCGC	1 cut(s)	1559
Cfr13I	GGNCC	4 cut(s)	431, 935, 1703, 1875
CseI	GACGC	1 cut(s)	730
Csp6I	GTAC	6 cut(s)	400, 469, 545, 653, 1377, 1573
CspCI	CAANNNNNGTGG	4 cut(s)	45, 80, 1057, 1092
CviAII	CATG	4 cut(s)	84, 517, 1213, 1670
CviQI	GTAC	6 cut(s)	400, 469, 545, 653, 1377, 1573
DdeI	CTNAG	9 cut(s)	134, 323, 403, 626, 725, 1504, 1524, 1738, 1802
DpnI	GATC	5 cut(s)	264, 1056, 1245, 1680, 1733
DpnII	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
EaeI	YGGCCR	2 cut(s)	1078, 1640
Eam1104I	CTCTTC	2 cut(s)	211, 1119
EarI	CTCTTC	2 cut(s)	211, 1119
Eco105I	TACGTA	1 cut(s)	243
Eco130I	CCWWGG	1 cut(s)	609
Eco24I	GRGCYC	1 cut(s)	331
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	3 cut(s)	935, 1703, 1875
Eco57I	CTGAAG	2 cut(s)	444, 678
Eco88I	CYCGRG	1 cut(s)	772
Eco91I	GGTNACC	3 cut(s)	575, 740, 1898
EcoNI	CCTNNNNNAGG	1 cut(s)	1860
EcoO109I	RGGNCCY	1 cut(s)	1875
EcoO65I	GGTNACC	3 cut(s)	575, 740, 1898
EcoRII	CCWGG	2 cut(s)	586, 1358
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	1 cut(s)	609
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	1 cut(s)	331
ErhI	CCWWGG	1 cut(s)	609
FaeI	CATG	4 cut(s)	87, 520, 1216, 1673
FaqI	GGGAC	4 cut(s)	733, 1463, 1888, 1950
FatI	CATG	4 cut(s)	83, 516, 1212, 1669
FbaI	TGATCA	1 cut(s)	1731
Fnu4HI	GCNGC	2 cut(s)	674, 1333
FokI	GGATG	4 cut(s)	75, 116, 422, 605
FriOI	GRGCYC	1 cut(s)	331
Fsp4HI	GCNGC	2 cut(s)	674, 1333
FspBI	CTAG	2 cut(s)	986, 1475
GlaI	GCGC	1 cut(s)	1558
GluI	GCNGC	2 cut(s)	674, 1333
HaeIII	GGCC	5 cut(s)	432, 617, 1080, 1642, 1800
HapII	CCGG	4 cut(s)	717, 1063, 1470, 1947
HgaI	GACGC	1 cut(s)	730
HhaI	GCGC	1 cut(s)	1559
Hin1II	CATG	4 cut(s)	87, 520, 1216, 1673
Hin6I	GCGC	1 cut(s)	1557
HinP1I	GCGC	1 cut(s)	1557
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	4 cut(s)	710, 1462, 1766, 1891
HinfI	GANTC	8 cut(s)	289, 299, 1021, 1189, 1600, 1744, 1886, 1943
HpaII	CCGG	4 cut(s)	717, 1063, 1470, 1947
HphI	GGTGA	3 cut(s)	587, 1201, 1910
Hpy166II	GTNNAC	5 cut(s)	531, 562, 653, 1631, 1790
Hpy188I	TCNGA	5 cut(s)	75, 169, 298, 1188, 1542
Hpy8I	GTNNAC	5 cut(s)	531, 562, 653, 1631, 1790
Hpy99I	CGWCG	1 cut(s)	476
HpyCH4III	ACNGT	6 cut(s)	230, 378, 831, 935, 1292, 1381
HpyCH4IV	ACGT	2 cut(s)	242, 471
HpyCH4V	TGCA	9 cut(s)	107, 201, 676, 1286, 1342, 1570, 1829, 1907, 1932
HpyF10VI	GCNNNNNNNGC	1 cut(s)	522
HpyF3I	CTNAG	9 cut(s)	134, 323, 403, 626, 725, 1504, 1524, 1738, 1802
HpySE526I	ACGT	2 cut(s)	242, 471
Hsp92II	CATG	4 cut(s)	87, 520, 1216, 1673
HspAI	GCGC	1 cut(s)	1557
Ksp22I	TGATCA	1 cut(s)	1731
Kzo9I	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
LmnI	GCTCC	1 cut(s)	1587
Lsp1109I	GCAGC	2 cut(s)	660, 1344
LweI	GCATC	1 cut(s)	94
MaeI	CTAG	2 cut(s)	986, 1475
MaeII	ACGT	2 cut(s)	242, 471
MaeIII	GTNAC	3 cut(s)	575, 740, 1898
MalI	GATC	5 cut(s)	264, 1056, 1245, 1680, 1733
MboI	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
MboII	GAAGA	8 cut(s)	37, 40, 198, 834, 1106, 1241, 1555, 1558
MfeI	CAATTG	1 cut(s)	598
MflI	RGATCY	3 cut(s)	262, 1054, 1678
MhlI	GDGCHC	1 cut(s)	331
MlsI	TGGCCA	2 cut(s)	1080, 1642
MluNI	TGGCCA	2 cut(s)	1080, 1642
MlyI	GAGTC	2 cut(s)	1594, 1738
MmeI	TCCRAC	7 cut(s)	76, 131, 240, 406, 917, 1166, 1271
Mox20I	TGGCCA	2 cut(s)	1080, 1642
Mph1103I	ATGCAT	1 cut(s)	109
MroXI	GAANNNNTTC	2 cut(s)	922, 1499
MscI	TGGCCA	2 cut(s)	1080, 1642
MseI	TTAA	5 cut(s)	750, 981, 1073, 1466, 1983
MslI	CAYNNNNRTG	1 cut(s)	93
Msp20I	TGGCCA	2 cut(s)	1080, 1642
MspA1I	CMGCKG	2 cut(s)	673, 1241
MspCI	CTTAAG	1 cut(s)	1072
MspI	CCGG	4 cut(s)	717, 1063, 1470, 1947
MspR9I	CCNGG	5 cut(s)	588, 718, 1063, 1360, 1948
MunI	CAATTG	1 cut(s)	598
MvaI	CCWGG	2 cut(s)	588, 1360
MwoI	GCNNNNNNNGC	1 cut(s)	522
NciI	CCSGG	3 cut(s)	718, 1063, 1948
NdeII	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
NlaIII	CATG	4 cut(s)	87, 520, 1216, 1673
NlaIV	GGNNCC	4 cut(s)	433, 502, 1655, 1876
NmeAIII	GCCGAG	1 cut(s)	514
NmuCI	GTSAC	2 cut(s)	575, 1898
NsiI	ATGCAT	1 cut(s)	109
NspI	RCATGY	2 cut(s)	87, 520
NspV	TTCGAA	1 cut(s)	820
PaeR7I	CTCGAG	1 cut(s)	772
PdmI	GAANNNNTTC	2 cut(s)	922, 1499
PfeI	GAWTC	6 cut(s)	289, 299, 1021, 1189, 1886, 1943
PflMI	CCANNNNNTGG	1 cut(s)	1649
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	2 cut(s)	675, 1334
PleI	GAGTC	2 cut(s)	1594, 1738
PpsI	GAGTC	2 cut(s)	1594, 1738
Ppu21I	YACGTR	1 cut(s)	243
PpuMI	RGGWCCY	1 cut(s)	1875
PshBI	ATTAAT	1 cut(s)	1983
Psp5II	RGGWCCY	1 cut(s)	1875
Psp6I	CCWGG	2 cut(s)	586, 1358
PspEI	GGTNACC	3 cut(s)	575, 740, 1898
PspGI	CCWGG	2 cut(s)	586, 1358
PspN4I	GGNNCC	4 cut(s)	433, 502, 1655, 1876
PspPI	GGNCC	4 cut(s)	431, 935, 1703, 1875
PspPPI	RGGWCCY	1 cut(s)	1875
PstI	CTGCAG	1 cut(s)	678
PstNI	CAGNNNCTG	2 cut(s)	79, 682
PsuI	RGATCY	3 cut(s)	262, 1054, 1678
PvuII	CAGCTG	2 cut(s)	673, 1241
RsaI	GTAC	6 cut(s)	401, 470, 546, 654, 1378, 1574
RsaNI	GTAC	6 cut(s)	400, 469, 545, 653, 1377, 1573
RseI	CAYNNNNRTG	1 cut(s)	93
SaqAI	TTAA	5 cut(s)	750, 981, 1073, 1466, 1983
SatI	GCNGC	2 cut(s)	674, 1333
Sau3AI	GATC	5 cut(s)	262, 1054, 1243, 1678, 1731
Sau96I	GGNCC	4 cut(s)	431, 935, 1703, 1875
ScaI	AGTACT	2 cut(s)	401, 546
SchI	GAGTC	2 cut(s)	1594, 1738
ScrFI	CCNGG	5 cut(s)	588, 718, 1063, 1360, 1948
SduI	GDGCHC	1 cut(s)	331
SfaNI	GCATC	1 cut(s)	94
SfcI	CTRYAG	1 cut(s)	674
Sfr274I	CTCGAG	1 cut(s)	772
SfuI	TTCGAA	1 cut(s)	820
SinI	GGWCC	3 cut(s)	935, 1703, 1875
SlaI	CTCGAG	1 cut(s)	772
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	5 cut(s)	409, 772, 856, 1072, 1509
SmoI	CTYRAG	5 cut(s)	409, 772, 856, 1072, 1509
SnaBI	TACGTA	1 cut(s)	243
SspI	AATATT	1 cut(s)	1852
SspMI	CTAG	2 cut(s)	986, 1475
StyD4I	CCNGG	5 cut(s)	586, 716, 1061, 1358, 1946
StyI	CCWWGG	1 cut(s)	609
TaaI	ACNGT	6 cut(s)	230, 378, 831, 935, 1292, 1381
TaiI	ACGT	2 cut(s)	245, 474
TaqI	TCGA	4 cut(s)	474, 773, 820, 1019
TatI	WGTACW	3 cut(s)	399, 544, 1572
TfiI	GAWTC	6 cut(s)	289, 299, 1021, 1189, 1886, 1943
Tru1I	TTAA	5 cut(s)	750, 981, 1073, 1466, 1983
Tru9I	TTAA	5 cut(s)	750, 981, 1073, 1466, 1983
TscAI	CASTG	6 cut(s)	381, 933, 1187, 1322, 1633, 1797
TseFI	GTSAC	2 cut(s)	575, 1898
TseI	GCWGC	2 cut(s)	673, 1332
Tsp45I	GTSAC	2 cut(s)	575, 1898
TspDTI	ATGAA	6 cut(s)	1097, 1106, 1229, 1242, 1244, 1658
TspRI	CASTG	6 cut(s)	381, 933, 1187, 1322, 1633, 1797
Van91I	CCANNNNNTGG	1 cut(s)	1649
Vha464I	CTTAAG	1 cut(s)	1072
VpaK11BI	GGWCC	3 cut(s)	935, 1703, 1875
VspI	ATTAAT	1 cut(s)	1983
XagI	CCTNNNNNAGG	1 cut(s)	1860
XapI	RAATTY	6 cut(s)	160, 391, 1083, 1170, 1496, 1685
XceI	RCATGY	2 cut(s)	87, 520
XhoI	CTCGAG	1 cut(s)	772
XmnI	GAANNNNTTC	2 cut(s)	922, 1499
XspI	CTAG	2 cut(s)	986, 1475
ZrmI	AGTACT	2 cut(s)	401, 546
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.