Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

65438733 .. 65440832

Gene Structure 2100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00386570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGGGATTCTAAAAATCTTGCTGGTCATCCTTGTTACTGGGTTTTGCTTCCAAACTCCAGTTTTGAGCTTTCAGAACCTGACATGCAATCCAAATGACTTTCAAGCATTGCAGGATTTCATGACAGGTTTATCAACAAAAGTAGGTGGGTGGGGAAATGAGTTCTCTTCCAATTGCTGTAAATGGCCAGGTATCACTTGCAACTCTTCATCTTCTCTTGGATTGAATGCTTCTATTGATACCTATAGAGTGGTTAAGTTGGAACTTCCGAGTAAAAGATTAGTGGGAAAACTATCTGAGTCTATAGGCAATTTGGAACAGCTAAGGACACTTAACCTCTCCCACAATTTTTTCAAAGCCTCACTTCCAGTTTCATTGTTCCATTTGCCAAATTTACAACTGTTAGACCTGAGCTTTAATGACATTTCTGGTCCCATTCCAGTTGCTATTGATTTACCTTCAATCCAGTCCATTGACATGTCAGAAAACATCTTGAACGGTACTCTTCCAGCAAGTATCTGCGTCAATTCTCATCACCTTCGTGTGCTGAACCTAGGTGTGAACTACTTGTCTGGTAGCCTCCCACTAGGTCTTGGCAATTGTAGTTCCTTGGAAGACCTCCGTCTCAACATGAATGATCTCAGAGGTGGAATATCTGAAGGTTTAGTTCGGCTACAAAAGCTAAACCAGTTGAGAATTCAAGGTAACCAGTTTTCCGGGCCACTGAGCAAAGAAGTTGGTAACCTCATCAACCTTGTTTGTTTGGATATCTCAACTAATTCGTTTTCAGGAACTATCCCAGATGTTTTCCACAGCCTTGGAAGGTTACAGTTTTTTATTGCTGATGCAAATAATTTTAGTGGTCAAATACCACCTTCCCTGTCAAATTCCCCAACTATTTCTTTGCTTGGTGTGAGAAACAATTCTCTGGAGGGTACCATCCAACTGAATTGTTCAGCAATGACTAGTTTGGTCTCTCTTGATCTAGGTTCCAATCGGTTTGATGGGCTTATTCCATTCAATCTTCCCTCTTGTAGGCATTTGAATAATATAAATCTTGCCCGGAACAATTTGAGTGGCCAAATCCCAGAAAGTTTCAAGAATTTTCATACTCTTTCTTACCTATCACTCTCAAACTCCAGCATTTCTAATCTTTCATCTGCCCTTCAAATATTACAGCAGTGTCAAAACATAACTACTTTGGTTCTCACAATGAACTTCCTTGATGAAGAATTGCCAGCTGATCCAACCCTTCATTTTGAAAATTTGAAGGTTCTCATTCTTGCAAATTGTAGGCTCATGGGTTCAATACCCCAATGGTTGAGTAGCAGTAGCAATCTGCAGTTGCTGGATTTATCTTGGAACCGCTTGGAAGGAACAATCCCAGTCTGGTTTGGTGGTTTTAGGCATCTCTTCTACCTGGACGTATCAAACAATTCTCTCACTGGGGATATTCCTAGAAGCATAACTGGACTACGGAGCCTCATTGATTGGAATTATTCCTCAGTTCAAGAAGCTTCCCCTGATTTTCCTCTTTTCATGAAAAAGAATGCAAGTGGAAGAGGATTGCAGTATAATCAAGTATGGAGGTTCCCACCTACATTGGAATTTCGCAACAATGAGCTTAGCGGACCAATCTGGCCAGAGTTTGGGAACCTGAAATCACTTCATGTTTTGGATCTTGGATTCAACAGTCTATCGGGACCAATTCCAAGTACTCTATCTAAGATGACCAGCTTAGAGACTCTAGATCTGTCTCATAACAAGCTCTCGGGGAGAATACCACCTTCGTTGGTTCAGCTCAGCTTTTTGTCCAAGTTTAGTATTGCAGACAACCAGTTAGAGGGGTCGATCCCTACAGGAGGTCAGTTCATGACCTTTCCAAATTCCAGCTTTCAAGGGAACAATCTTTGTGGCTTCCATGCTCCCTCTTGTACGTCAGATTCCAAGCCAGAAGAACTGGATAGCGGACCACCCGAAAAATCATCAAGAGTAGAATTAGAAGTTGATGGGGTTTATATAGGAATAGCTGTAGGATTTGTATTTGGAATCACCTGTTTCATTGGAACAGATAAATATGTATGGACTTGGAAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

699

Amino Acids

76.62

Weight (kDa)

5.77

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 68	2.2e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	80 - 234	9.9e-06	Leucine-rich repeat region
LRR_8	PF13855	86 - 142	4e-07	Leucine rich repeat
LRR_8	PF13855	550 - 590	6.5e-07	Leucine rich repeat
LRR_8	PF13855	555 - 614	9.8e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	935
AccB1I	GGYRCC	1 cut(s)	935
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AciI	CCGC	3 cut(s)	1366, 1629, 1968
AclWI	GGATC	3 cut(s)	1238, 1686, 1846
AcoI	YGGCCR	3 cut(s)	185, 1078, 1640
AcsI	RAATTY	7 cut(s)	391, 696, 886, 1102, 1264, 1607, 1885
AcuI	CTGAAG	1 cut(s)	678
AfaI	GTAC	4 cut(s)	502, 937, 1717, 1936
AfiI	CCNNNNNNNGG	4 cut(s)	1035, 1649, 1843, 1862
AflIII	ACRYGT	1 cut(s)	477
AhlI	ACTAGT	1 cut(s)	965
AjnI	CCWGG	2 cut(s)	187, 1419
AleI	CACNNNNGTG	1 cut(s)	540
Alw26I	GTCTC	4 cut(s)	629, 979, 1736, 1761
AlwI	GGATC	3 cut(s)	1238, 1686, 1846
AlwNI	CAGNNNCTG	2 cut(s)	79, 1348
Ama87I	CYCGRG	1 cut(s)	1771
AoxI	GGCC	4 cut(s)	185, 719, 1078, 1640
ApoI	RAATTY	7 cut(s)	391, 696, 886, 1102, 1264, 1607, 1885
Asp700I	GAANNNNTTC	1 cut(s)	922
Asp718I	GGTACC	1 cut(s)	935
AspA2I	CCTAGG	1 cut(s)	553
AspS9I	GGNCC	5 cut(s)	431, 719, 1631, 1703, 1970
AsuC2I	CCSGG	2 cut(s)	718, 1063
AsuHPI	GGTGA	2 cut(s)	527, 2044
AvaI	CYCGRG	1 cut(s)	1771
AvaII	GGWCC	4 cut(s)	431, 1631, 1703, 1970
AvrII	CCTAGG	1 cut(s)	553
BalI	TGGCCA	3 cut(s)	187, 1080, 1642
BanI	GGYRCC	1 cut(s)	935
BbsI	GAAGAC	1 cut(s)	621
BccI	CCATC	3 cut(s)	947, 998, 2003
BciT130I	CCWGG	2 cut(s)	189, 1421
BcnI	CCSGG	2 cut(s)	718, 1063
BcoDI	GTCTC	4 cut(s)	629, 979, 1736, 1761
BcuI	ACTAGT	1 cut(s)	965
BfaI	CTAG	6 cut(s)	554, 587, 966, 986, 1458, 1748
BfmI	CTRYAG	5 cut(s)	244, 303, 1340, 1857, 2031
BglII	AGATCT	1 cut(s)	1750
BlnI	CCTAGG	1 cut(s)	553
BlpI	GCTNAGC	2 cut(s)	1625, 1802
BmcAI	AGTACT	1 cut(s)	1717
Bme1390I	CCNGG	4 cut(s)	189, 718, 1063, 1421
Bme18I	GGWCC	4 cut(s)	431, 1631, 1703, 1970
BmeT110I	CYCGRG	1 cut(s)	1771
BmgT120I	GGNCC	5 cut(s)	431, 719, 1631, 1703, 1970
BmiI	GGNNCC	8 cut(s)	433, 937, 991, 1364, 1481, 1592, 1655, 1704
BmrFI	CCNGG	4 cut(s)	189, 718, 1063, 1421
BmrI	ACTGGG	3 cut(s)	48, 1379, 1455
BmsI	GCATC	2 cut(s)	835, 1417
BmuI	ACTGGG	3 cut(s)	48, 1379, 1455
BoxI	GACNNNNGTC	1 cut(s)	621
BpiI	GAAGAC	1 cut(s)	621
BpmI	CTGGAG	3 cut(s)	42, 950, 1123
Bpu10I	CCTNAGC	2 cut(s)	323, 410
Bpu1102I	GCTNAGC	2 cut(s)	1625, 1802
BpuMI	CCSGG	2 cut(s)	718, 1063
BsaI	GGTCTC	1 cut(s)	979
BsaJI	CCNNGG	3 cut(s)	553, 609, 817
Bsc4I	CCNNNNNNNGG	4 cut(s)	1035, 1649, 1843, 1862
Bse3DI	GCAATG	2 cut(s)	107, 966
BseBI	CCWGG	2 cut(s)	189, 1421
BseDI	CCNNGG	3 cut(s)	553, 609, 817
BseGI	GGATG	2 cut(s)	27, 939
BseLI	CCNNNNNNNGG	4 cut(s)	1035, 1649, 1843, 1862
BseMI	GCAATG	2 cut(s)	107, 966
BseMII	CTCAG	6 cut(s)	288, 401, 655, 716, 1518, 1816
BshFI	GGCC	4 cut(s)	187, 721, 1080, 1642
BshNI	GGYRCC	1 cut(s)	935
BsiHKCI	CYCGRG	1 cut(s)	1771
BsiSI	CCGG	2 cut(s)	717, 1063
BslFI	GGGAC	2 cut(s)	417, 1716
BslI	CCNNNNNNNGG	4 cut(s)	1035, 1649, 1843, 1862
BsmAI	GTCTC	4 cut(s)	629, 979, 1736, 1761
BsmBI	CGTCTC	1 cut(s)	629
BsmFI	GGGAC	2 cut(s)	417, 1716
BsmI	GAATGC	2 cut(s)	232, 1555
BsnI	GGCC	4 cut(s)	187, 721, 1080, 1642
Bso31I	GGTCTC	1 cut(s)	979
BsoBI	CYCGRG	1 cut(s)	1771
Bsp143I	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
Bsp1720I	GCTNAGC	2 cut(s)	1625, 1802
BspACI	CCGC	3 cut(s)	1366, 1629, 1968
BspANI	GGCC	4 cut(s)	187, 721, 1080, 1642
BspCNI	CTCAG	6 cut(s)	289, 402, 654, 717, 1517, 1815
BspHI	TCATGA	3 cut(s)	120, 1539, 1872
BspLI	GGNNCC	8 cut(s)	433, 937, 991, 1364, 1481, 1592, 1655, 1704
BspMAI	CTGCAG	1 cut(s)	1344
BspPI	GGATC	3 cut(s)	1238, 1686, 1846
BspT107I	GGYRCC	1 cut(s)	935
BspTNI	GGTCTC	1 cut(s)	979
BsrDI	GCAATG	2 cut(s)	107, 966
BssECI	CCNNGG	3 cut(s)	553, 609, 817
BssMI	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
BssT1I	CCWWGG	3 cut(s)	553, 609, 817
Bst2UI	CCWGG	2 cut(s)	189, 1421
Bst4CI	ACNGT	4 cut(s)	402, 500, 831, 1694
Bst6I	CTCTTC	5 cut(s)	172, 211, 510, 1418, 1555
BstC8I	GCNNGC	1 cut(s)	1239
BstEII	GGTNACC	2 cut(s)	704, 740
BstENI	CCTNNNNNAGG	2 cut(s)	1033, 1860
BstF5I	GGATG	2 cut(s)	27, 939
BstKTI	GATC	6 cut(s)	640, 985, 1246, 1681, 1753, 1854
BstMAI	GTCTC	4 cut(s)	629, 979, 1736, 1761
BstMBI	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
BstMWI	GCNNNNNNNGC	1 cut(s)	679
BstNI	CCWGG	2 cut(s)	189, 1421
BstNSI	RCATGY	2 cut(s)	87, 481
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	2 cut(s)	704, 740
BstSCI	CCNGG	4 cut(s)	187, 716, 1061, 1419
BstSFI	CTRYAG	5 cut(s)	244, 303, 1340, 1857, 2031
BstV2I	GAAGAC	1 cut(s)	621
BstX2I	RGATCY	2 cut(s)	1678, 1750
BstXI	CCANNNNNNTGG	1 cut(s)	818
BstYI	RGATCY	2 cut(s)	1678, 1750
BsuRI	GGCC	4 cut(s)	187, 721, 1080, 1642
BtsCI	GGATG	2 cut(s)	27, 939
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	3 cut(s)	722, 1187, 1443
Cac8I	GCNNGC	1 cut(s)	1239
CaiI	CAGNNNCTG	2 cut(s)	79, 1348
CciI	TCATGA	3 cut(s)	120, 1539, 1872
Cfr13I	GGNCC	5 cut(s)	431, 719, 1631, 1703, 1970
CseI	GACGC	1 cut(s)	511
Csp6I	GTAC	4 cut(s)	501, 936, 1716, 1935
CspCI	CAANNNNNGTGG	8 cut(s)	1057, 1092, 1584, 1619, 1773, 1808, 1894, 1929
CviAII	CATG	9 cut(s)	84, 121, 478, 631, 1300, 1540, 1670, 1873, 1922
CviQI	GTAC	4 cut(s)	501, 936, 1716, 1935
DpnI	GATC	6 cut(s)	639, 984, 1245, 1680, 1752, 1853
DpnII	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
EaeI	YGGCCR	3 cut(s)	185, 1078, 1640
Eam1104I	CTCTTC	5 cut(s)	172, 211, 510, 1418, 1555
EarI	CTCTTC	5 cut(s)	172, 211, 510, 1418, 1555
Eco130I	CCWWGG	3 cut(s)	553, 609, 817
Eco31I	GGTCTC	1 cut(s)	979
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	4 cut(s)	431, 1631, 1703, 1970
Eco57I	CTGAAG	1 cut(s)	678
Eco88I	CYCGRG	1 cut(s)	1771
Eco91I	GGTNACC	2 cut(s)	704, 740
EcoNI	CCTNNNNNAGG	2 cut(s)	1033, 1860
EcoO65I	GGTNACC	2 cut(s)	704, 740
EcoRI	GAATTC	1 cut(s)	696
EcoRII	CCWGG	2 cut(s)	187, 1419
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	3 cut(s)	553, 609, 817
ErhI	CCWWGG	3 cut(s)	553, 609, 817
Esp3I	CGTCTC	1 cut(s)	629
FaeI	CATG	9 cut(s)	87, 124, 481, 634, 1303, 1543, 1673, 1876, 1925
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	2 cut(s)	417, 1716
FatI	CATG	9 cut(s)	83, 120, 477, 630, 1299, 1539, 1669, 1872, 1921
FokI	GGATG	2 cut(s)	14, 926
FspBI	CTAG	6 cut(s)	554, 587, 966, 986, 1458, 1748
GsuI	CTGGAG	3 cut(s)	42, 950, 1123
HaeIII	GGCC	4 cut(s)	187, 721, 1080, 1642
HapII	CCGG	2 cut(s)	717, 1063
HgaI	GACGC	1 cut(s)	511
Hin1II	CATG	9 cut(s)	87, 124, 481, 634, 1303, 1543, 1673, 1876, 1925
HindIII	AAGCTT	1 cut(s)	1515
HinfI	GANTC	6 cut(s)	7, 299, 1686, 1744, 1943, 2049
HpaII	CCGG	2 cut(s)	717, 1063
HphI	GGTGA	2 cut(s)	527, 2044
Hpy166II	GTNNAC	1 cut(s)	562
Hpy188I	TCNGA	7 cut(s)	75, 270, 298, 484, 644, 658, 1942
Hpy8I	GTNNAC	1 cut(s)	562
HpyCH4III	ACNGT	4 cut(s)	402, 500, 831, 1694
HpyCH4IV	ACGT	2 cut(s)	1425, 1937
HpyCH4V	TGCA	9 cut(s)	87, 112, 201, 848, 1286, 1342, 1553, 1570, 1829
HpyF10VI	GCNNNNNNNGC	1 cut(s)	679
HpySE526I	ACGT	2 cut(s)	1425, 1937
Hsp92II	CATG	9 cut(s)	87, 124, 481, 634, 1303, 1543, 1673, 1876, 1925
KpnI	GGTACC	1 cut(s)	939
Kzo9I	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
LmnI	GCTCC	2 cut(s)	1479, 1930
LweI	GCATC	2 cut(s)	835, 1417
MaeI	CTAG	6 cut(s)	554, 587, 966, 986, 1458, 1748
MaeII	ACGT	2 cut(s)	1425, 1937
MaeIII	GTNAC	4 cut(s)	34, 704, 740, 825
MalI	GATC	6 cut(s)	639, 984, 1245, 1680, 1752, 1853
MboI	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
MfeI	CAATTG	2 cut(s)	172, 598
MflI	RGATCY	2 cut(s)	1678, 1750
MlsI	TGGCCA	3 cut(s)	187, 1080, 1642
MluNI	TGGCCA	3 cut(s)	187, 1080, 1642
MlyI	GAGTC	2 cut(s)	308, 1738
MmeI	TCCRAC	3 cut(s)	240, 967, 1271
Mox20I	TGGCCA	3 cut(s)	187, 1080, 1642
MroXI	GAANNNNTTC	1 cut(s)	922
MscI	TGGCCA	3 cut(s)	187, 1080, 1642
MseI	TTAA	3 cut(s)	255, 333, 417
MslI	CAYNNNNRTG	2 cut(s)	476, 540
Msp20I	TGGCCA	3 cut(s)	187, 1080, 1642
MspA1I	CMGCKG	1 cut(s)	1241
MspI	CCGG	2 cut(s)	717, 1063
MspR9I	CCNGG	4 cut(s)	189, 718, 1063, 1421
MunI	CAATTG	2 cut(s)	172, 598
Mva1269I	GAATGC	2 cut(s)	232, 1555
MvaI	CCWGG	2 cut(s)	189, 1421
MwoI	GCNNNNNNNGC	1 cut(s)	679
NciI	CCSGG	2 cut(s)	718, 1063
NdeII	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
NlaIII	CATG	9 cut(s)	87, 124, 481, 634, 1303, 1543, 1673, 1876, 1925
NlaIV	GGNNCC	8 cut(s)	433, 937, 991, 1364, 1481, 1592, 1655, 1704
NspI	RCATGY	2 cut(s)	87, 481
OliI	CACNNNNGTG	1 cut(s)	540
PagI	TCATGA	3 cut(s)	120, 1539, 1872
PciI	ACATGT	1 cut(s)	477
PctI	GAATGC	2 cut(s)	232, 1555
PdmI	GAANNNNTTC	1 cut(s)	922
PfeI	GAWTC	4 cut(s)	7, 1686, 1943, 2049
PflMI	CCANNNNNTGG	1 cut(s)	1649
PleI	GAGTC	2 cut(s)	307, 1738
PpsI	GAGTC	2 cut(s)	307, 1738
PscI	ACATGT	1 cut(s)	477
PshAI	GACNNNNGTC	1 cut(s)	621
Psp6I	CCWGG	2 cut(s)	187, 1419
PspEI	GGTNACC	2 cut(s)	704, 740
PspGI	CCWGG	2 cut(s)	187, 1419
PspN4I	GGNNCC	8 cut(s)	433, 937, 991, 1364, 1481, 1592, 1655, 1704
PspPI	GGNCC	5 cut(s)	431, 719, 1631, 1703, 1970
PstI	CTGCAG	1 cut(s)	1344
PstNI	CAGNNNCTG	2 cut(s)	79, 1348
PsuI	RGATCY	2 cut(s)	1678, 1750
PvuII	CAGCTG	1 cut(s)	1241
RsaI	GTAC	4 cut(s)	502, 937, 1717, 1936
RsaNI	GTAC	4 cut(s)	501, 936, 1716, 1935
RseI	CAYNNNNRTG	2 cut(s)	476, 540
SaqAI	TTAA	3 cut(s)	255, 333, 417
Sau3AI	GATC	6 cut(s)	637, 982, 1243, 1678, 1750, 1851
Sau96I	GGNCC	5 cut(s)	431, 719, 1631, 1703, 1970
ScaI	AGTACT	1 cut(s)	1717
SchI	GAGTC	2 cut(s)	308, 1738
ScrFI	CCNGG	4 cut(s)	189, 718, 1063, 1421
SfaNI	GCATC	2 cut(s)	835, 1417
SfcI	CTRYAG	5 cut(s)	244, 303, 1340, 1857, 2031
SinI	GGWCC	4 cut(s)	431, 1631, 1703, 1970
SmiMI	CAYNNNNRTG	2 cut(s)	476, 540
SpeI	ACTAGT	1 cut(s)	965
SsiI	CCGC	3 cut(s)	1366, 1629, 1968
SspI	AATATT	1 cut(s)	1173
SspMI	CTAG	6 cut(s)	554, 587, 966, 986, 1458, 1748
StyD4I	CCNGG	4 cut(s)	187, 716, 1061, 1419
StyI	CCWWGG	3 cut(s)	553, 609, 817
TaaI	ACNGT	4 cut(s)	402, 500, 831, 1694
TaiI	ACGT	2 cut(s)	1428, 1940
TaqI	TCGA	1 cut(s)	1850
TatI	WGTACW	1 cut(s)	1715
TfiI	GAWTC	4 cut(s)	7, 1686, 1943, 2049
Tru1I	TTAA	3 cut(s)	255, 333, 417
Tru9I	TTAA	3 cut(s)	255, 333, 417
TscAI	CASTG	3 cut(s)	729, 1187, 1450
TspGWI	ACGGA	2 cut(s)	611, 1492
TspRI	CASTG	3 cut(s)	729, 1187, 1450
Van91I	CCANNNNNTGG	1 cut(s)	1649
VpaK11BI	GGWCC	4 cut(s)	431, 1631, 1703, 1970
XagI	CCTNNNNNAGG	2 cut(s)	1033, 1860
XapI	RAATTY	7 cut(s)	391, 696, 886, 1102, 1264, 1607, 1885
XbaI	TCTAGA	1 cut(s)	1747
XceI	RCATGY	2 cut(s)	87, 481
XmaJI	CCTAGG	1 cut(s)	553
XmnI	GAANNNNTTC	1 cut(s)	922
XspI	CTAG	6 cut(s)	554, 587, 966, 986, 1458, 1748
ZrmI	AGTACT	1 cut(s)	1717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.