Rmu_sc0024859.1_g000001

Phytosulfokine receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024859.1
Physical Location & Seq
Reverse (-)
2 .. 1643
1642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024859.1_g000001.1.cds

Sequence Viewer

Length: 1642 bp
atggggattctaaaaatcttgctggtcatccttgttactgggttttgcttccaaactccagttttgagctttcagaacctgacatgcaatccaaatgactttcaagcattgcaggatttcatgacaggtttatcaacaaaagtaggtgggtggggaaatgatttctcttccaattgctgtaaatggccaggtatcacttgcaactcttcatcttctcttggattgaatgattctattgatacctatagagtggttaagttggagcttccgagtaaaagactagtgggaaaactatctgagtctataggcaatttggaacagctaaggacacttaacctctcccacaattttttcaaagcctcacttccagtttcattgttccatttgccaaatttacgactgttagacctgagctttaatgacatttctggtcccattccaggtgttattgatttaccttcaatccagtccattgacatgtcagaaaacatcttgaacggtactcttccagcaagtatctgcgtcaattctcatcaccttcgtgtgctgaacctaggtgtgaactacttgtctggtagcctcccaccaggtcttggcagttgtagttccttggaagacctccgtctcaacatgaatgatctcagaggtggaatatcggaaggtttagttcggctgcaaaagctaacccagttaagaattcaaggtaaccagttttccgggccactgagcaaagaagttggtaacctcatcaaccttgtttgtttggatatctcgactaattcgttttcaggaaccatcccagatgttttccacagccttggaaggttacagttttttattgctgatgcaaataattttagtggtcaaataccaccttctctgtcaaattccccaactatttctttgcttggtgtgagaaacaattcactggagggtaccatccaactgaattgttcagcaatgactagtttggtctctcttgatctaggttccaatcggtttgatgggcctattccatccaatcttccctcttgtaggcatttgaataatataaatcttgcccggaacaatttgagtggccaaatcccagaaagtttcaagaattttcatactctttcttacctgtcactctcaaactccagcatttctaatctttcatctgcccttcaaatattacagcagtgtcaaaacataactactctggttctcacaatgaacttccttgatgaagaattgtcagctgatccaacccttcattttgaaaatttgaaggttctcattcttgcaaattgtaggctcatgggttcaataccccaatggttgagtagtagtagcaatctgcagttgctggatttatcttggaaccgcttggaaggaacaatcccagtctggtttggtggttttaggcatctcttctacctggacgtatcaaacaattctctcactggggatattcctagaagcataactggactacggagcctcattgattggaattattcctcagttcaagatccttcccccgattttcctcttttcatgaaaaagaatgcaagtgcaagaggattgcagtataatcaagtttggaggttcccacctacattggaatttcgcaacaatgagcttagcggaccaatctggc

Protein Analysis

547

Amino Acids

60.12

Weight (kDa)

6.15

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 935
AccB1I GGYRCC 1 cut(s) 935
AccB7I CCANNNNNTGG 1 cut(s) 593
AciI CCGC 2 cut(s) 1366, 1629
AclWI GGATC 2 cut(s) 1238, 1508
AcoI YGGCCR 2 cut(s) 185, 1078
AcsI RAATTY 6 cut(s) 391, 696, 886, 1102, 1264, 1607
AfaI GTAC 2 cut(s) 502, 937
AfiI CCNNNNNNNGG 3 cut(s) 440, 593, 1035
AflIII ACRYGT 1 cut(s) 477
AhlI ACTAGT 2 cut(s) 280, 965
AjnI CCWGG 4 cut(s) 187, 439, 586, 1419
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 7 cut(s) 69, 265, 322, 414, 682, 1241, 1624
AluI AGCT 7 cut(s) 69, 265, 322, 414, 682, 1241, 1624
Alw26I GTCTC 2 cut(s) 629, 979
AlwI GGATC 2 cut(s) 1238, 1508
AlwNI CAGNNNCTG 2 cut(s) 79, 1348
AoxI GGCC 4 cut(s) 185, 719, 1007, 1078
ApeKI GCWGC 1 cut(s) 673
ApoI RAATTY 6 cut(s) 391, 696, 886, 1102, 1264, 1607
Asp700I GAANNNNTTC 1 cut(s) 922
Asp718I GGTACC 1 cut(s) 935
AspA2I CCTAGG 1 cut(s) 553
AspS9I GGNCC 4 cut(s) 431, 719, 1007, 1631
AsuC2I CCSGG 2 cut(s) 718, 1063
AsuHPI GGTGA 1 cut(s) 527
AvaII GGWCC 2 cut(s) 431, 1631
AvrII CCTAGG 1 cut(s) 553
BalI TGGCCA 2 cut(s) 187, 1080
BanI GGYRCC 1 cut(s) 935
BbsI GAAGAC 1 cut(s) 621
BbvI GCAGC 1 cut(s) 660
BccI CCATC 4 cut(s) 803, 947, 998, 1024
BciT130I CCWGG 4 cut(s) 189, 441, 588, 1421
BcnI CCSGG 2 cut(s) 718, 1063
BcoDI GTCTC 2 cut(s) 629, 979
BcuI ACTAGT 2 cut(s) 280, 965
BfaI CTAG 5 cut(s) 281, 554, 966, 986, 1458
BfmI CTRYAG 3 cut(s) 244, 303, 1340
BisI GCNGC 1 cut(s) 674
BlnI CCTAGG 1 cut(s) 553
BlpI GCTNAGC 1 cut(s) 1625
BlsI GCNGC 1 cut(s) 675
Bme1390I CCNGG 6 cut(s) 189, 441, 588, 718, 1063, 1421
Bme18I GGWCC 2 cut(s) 431, 1631
BmgT120I GGNCC 4 cut(s) 431, 719, 1007, 1631
BmiI GGNNCC 7 cut(s) 433, 793, 937, 991, 1364, 1481, 1592
BmrFI CCNGG 6 cut(s) 189, 441, 588, 718, 1063, 1421
BmrI ACTGGG 4 cut(s) 48, 682, 1379, 1455
BmsI GCATC 2 cut(s) 835, 1417
BmuI ACTGGG 4 cut(s) 48, 682, 1379, 1455
BoxI GACNNNNGTC 1 cut(s) 621
BpiI GAAGAC 1 cut(s) 621
BpmI CTGGAG 3 cut(s) 42, 950, 1123
Bpu10I CCTNAGC 2 cut(s) 323, 410
Bpu1102I GCTNAGC 1 cut(s) 1625
BpuMI CCSGG 2 cut(s) 718, 1063
BsaI GGTCTC 1 cut(s) 979
BsaJI CCNNGG 3 cut(s) 553, 609, 817
Bsc4I CCNNNNNNNGG 3 cut(s) 440, 593, 1035
Bse3DI GCAATG 2 cut(s) 107, 966
BseBI CCWGG 4 cut(s) 189, 441, 588, 1421
BseDI CCNNGG 3 cut(s) 553, 609, 817
BseGI GGATG 4 cut(s) 27, 795, 939, 1016
BseLI CCNNNNNNNGG 3 cut(s) 440, 593, 1035
BseMI GCAATG 2 cut(s) 107, 966
BseMII CTCAG 5 cut(s) 288, 401, 655, 716, 1518
BseXI GCAGC 1 cut(s) 660
BshFI GGCC 4 cut(s) 187, 721, 1009, 1080
BshNI GGYRCC 1 cut(s) 935
BsiSI CCGG 2 cut(s) 717, 1063
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 3 cut(s) 440, 593, 1035
BsmAI GTCTC 2 cut(s) 629, 979
BsmBI CGTCTC 1 cut(s) 629
BsmFI GGGAC 1 cut(s) 417
BsmI GAATGC 1 cut(s) 1555
BsnI GGCC 4 cut(s) 187, 721, 1009, 1080
Bso31I GGTCTC 1 cut(s) 979
Bsp143I GATC 4 cut(s) 637, 982, 1243, 1513
Bsp1720I GCTNAGC 1 cut(s) 1625
BspACI CCGC 2 cut(s) 1366, 1629
BspANI GGCC 4 cut(s) 187, 721, 1009, 1080
BspCNI CTCAG 5 cut(s) 289, 402, 654, 717, 1517
BspHI TCATGA 2 cut(s) 120, 1539
BspLI GGNNCC 7 cut(s) 433, 793, 937, 991, 1364, 1481, 1592
BspMAI CTGCAG 1 cut(s) 1344
BspPI GGATC 2 cut(s) 1238, 1508
BspT107I GGYRCC 1 cut(s) 935
BspTNI GGTCTC 1 cut(s) 979
BsrDI GCAATG 2 cut(s) 107, 966
BssECI CCNNGG 3 cut(s) 553, 609, 817
BssMI GATC 4 cut(s) 637, 982, 1243, 1513
BssT1I CCWWGG 3 cut(s) 553, 609, 817
Bst2UI CCWGG 4 cut(s) 189, 441, 588, 1421
Bst4CI ACNGT 3 cut(s) 402, 500, 831
Bst6I CTCTTC 4 cut(s) 172, 211, 510, 1418
BstDEI CTNAG 7 cut(s) 297, 323, 410, 641, 725, 1504, 1625
BstEII GGTNACC 2 cut(s) 704, 740
BstENI CCTNNNNNAGG 1 cut(s) 1033
BstF5I GGATG 4 cut(s) 27, 795, 939, 1016
BstKTI GATC 4 cut(s) 640, 985, 1246, 1516
BstMAI GTCTC 2 cut(s) 629, 979
BstMBI GATC 4 cut(s) 637, 982, 1243, 1513
BstMWI GCNNNNNNNGC 1 cut(s) 679
BstNI CCWGG 4 cut(s) 189, 441, 588, 1421
BstNSI RCATGY 2 cut(s) 87, 481
BstPAI GACNNNNGTC 1 cut(s) 621
BstPI GGTNACC 2 cut(s) 704, 740
BstSCI CCNGG 6 cut(s) 187, 439, 586, 716, 1061, 1419
BstSFI CTRYAG 3 cut(s) 244, 303, 1340
BstV1I GCAGC 1 cut(s) 660
BstV2I GAAGAC 1 cut(s) 621
BstX2I RGATCY 1 cut(s) 1513
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 1 cut(s) 1513
BsuRI GGCC 4 cut(s) 187, 721, 1009, 1080
BtsCI GGATG 4 cut(s) 27, 795, 939, 1016
BtsI GCAGTG 1 cut(s) 1187
BtsIMutI CAGTG 4 cut(s) 722, 926, 1187, 1443
CaiI CAGNNNCTG 2 cut(s) 79, 1348
CciI TCATGA 2 cut(s) 120, 1539
Cfr13I GGNCC 4 cut(s) 431, 719, 1007, 1631
CseI GACGC 1 cut(s) 511
CsiI ACCWGGT 1 cut(s) 586
Csp6I GTAC 2 cut(s) 501, 936
CspCI CAANNNNNGTGG 4 cut(s) 1057, 1092, 1584, 1619
CviAII CATG 6 cut(s) 84, 121, 478, 631, 1300, 1540
CviQI GTAC 2 cut(s) 501, 936
DdeI CTNAG 7 cut(s) 297, 323, 410, 641, 725, 1504, 1625
DpnI GATC 4 cut(s) 639, 984, 1245, 1515
DpnII GATC 4 cut(s) 637, 982, 1243, 1513
EaeI YGGCCR 2 cut(s) 185, 1078
Eam1104I CTCTTC 4 cut(s) 172, 211, 510, 1418
EarI CTCTTC 4 cut(s) 172, 211, 510, 1418
Eco130I CCWWGG 3 cut(s) 553, 609, 817
Eco31I GGTCTC 1 cut(s) 979
Eco32I GATATC 1 cut(s) 769
Eco47I GGWCC 2 cut(s) 431, 1631
Eco91I GGTNACC 2 cut(s) 704, 740
EcoNI CCTNNNNNAGG 1 cut(s) 1033
EcoO65I GGTNACC 2 cut(s) 704, 740
EcoRI GAATTC 1 cut(s) 696
EcoRII CCWGG 4 cut(s) 187, 439, 586, 1419
EcoRV GATATC 1 cut(s) 769
EcoT14I CCWWGG 3 cut(s) 553, 609, 817
ErhI CCWWGG 3 cut(s) 553, 609, 817
Esp3I CGTCTC 1 cut(s) 629
FaeI CATG 6 cut(s) 87, 124, 481, 634, 1303, 1543
FalI AAGNNNNNCTT 2 cut(s) 348, 380
FaqI GGGAC 1 cut(s) 417
FatI CATG 6 cut(s) 83, 120, 477, 630, 1299, 1539
Fnu4HI GCNGC 1 cut(s) 674
FokI GGATG 4 cut(s) 14, 782, 926, 1003
Fsp4HI GCNGC 1 cut(s) 674
FspBI CTAG 5 cut(s) 281, 554, 966, 986, 1458
GluI GCNGC 1 cut(s) 674
GsuI CTGGAG 3 cut(s) 42, 950, 1123
HaeIII GGCC 4 cut(s) 187, 721, 1009, 1080
HapII CCGG 2 cut(s) 717, 1063
HgaI GACGC 1 cut(s) 511
Hin1II CATG 6 cut(s) 87, 124, 481, 634, 1303, 1543
HinfI GANTC 3 cut(s) 7, 230, 299
HpaII CCGG 2 cut(s) 717, 1063
HphI GGTGA 1 cut(s) 527
Hpy166II GTNNAC 1 cut(s) 562
Hpy188I TCNGA 6 cut(s) 75, 270, 298, 484, 644, 658
Hpy188III TCNNGA 8 cut(s) 121, 493, 772, 789, 980, 1099, 1511, 1540
Hpy8I GTNNAC 1 cut(s) 562
HpyCH4III ACNGT 3 cut(s) 402, 500, 831
HpyCH4IV ACGT 1 cut(s) 1425
HpyF10VI GCNNNNNNNGC 1 cut(s) 679
HpyF3I CTNAG 7 cut(s) 297, 323, 410, 641, 725, 1504, 1625
HpySE526I ACGT 1 cut(s) 1425
Hsp92II CATG 6 cut(s) 87, 124, 481, 634, 1303, 1543
KpnI GGTACC 1 cut(s) 939
Kzo9I GATC 4 cut(s) 637, 982, 1243, 1513
LmnI GCTCC 2 cut(s) 262, 1479
Lsp1109I GCAGC 1 cut(s) 660
LweI GCATC 2 cut(s) 835, 1417
MabI ACCWGGT 1 cut(s) 586
MaeI CTAG 5 cut(s) 281, 554, 966, 986, 1458
MaeII ACGT 1 cut(s) 1425
MaeIII GTNAC 5 cut(s) 34, 704, 740, 825, 1125
MalI GATC 4 cut(s) 639, 984, 1245, 1515
MboI GATC 4 cut(s) 637, 982, 1243, 1513
MboII GAAGA 8 cut(s) 159, 198, 204, 497, 626, 1016, 1241, 1405
MfeI CAATTG 1 cut(s) 172
MflI RGATCY 1 cut(s) 1513
MlsI TGGCCA 2 cut(s) 187, 1080
MluNI TGGCCA 2 cut(s) 187, 1080
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 3 cut(s) 240, 967, 1271
Mox20I TGGCCA 2 cut(s) 187, 1080
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 2 cut(s) 187, 1080
MseI TTAA 4 cut(s) 255, 333, 417, 692
MslI CAYNNNNRTG 2 cut(s) 476, 540
Msp20I TGGCCA 2 cut(s) 187, 1080
MspA1I CMGCKG 1 cut(s) 1241
MspI CCGG 2 cut(s) 717, 1063
MspR9I CCNGG 6 cut(s) 189, 441, 588, 718, 1063, 1421
MunI CAATTG 1 cut(s) 172
Mva1269I GAATGC 1 cut(s) 1555
MvaI CCWGG 4 cut(s) 189, 441, 588, 1421
MwoI GCNNNNNNNGC 1 cut(s) 679
NciI CCSGG 2 cut(s) 718, 1063
NdeII GATC 4 cut(s) 637, 982, 1243, 1513
NlaIII CATG 6 cut(s) 87, 124, 481, 634, 1303, 1543
NlaIV GGNNCC 7 cut(s) 433, 793, 937, 991, 1364, 1481, 1592
NmuCI GTSAC 1 cut(s) 1125
NspI RCATGY 2 cut(s) 87, 481
OliI CACNNNNGTG 1 cut(s) 540
PagI TCATGA 2 cut(s) 120, 1539
PciI ACATGT 1 cut(s) 477
PcsI WCGNNNNNNNCGW 1 cut(s) 779
PctI GAATGC 1 cut(s) 1555
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 2 cut(s) 7, 230
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 1 cut(s) 675
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
PscI ACATGT 1 cut(s) 477
PshAI GACNNNNGTC 1 cut(s) 621
Psp6I CCWGG 4 cut(s) 187, 439, 586, 1419
PspEI GGTNACC 2 cut(s) 704, 740
PspGI CCWGG 4 cut(s) 187, 439, 586, 1419
PspN4I GGNNCC 7 cut(s) 433, 793, 937, 991, 1364, 1481, 1592
PspPI GGNCC 4 cut(s) 431, 719, 1007, 1631
PstI CTGCAG 1 cut(s) 1344
PstNI CAGNNNCTG 2 cut(s) 79, 1348
PsuI RGATCY 1 cut(s) 1513
PvuII CAGCTG 1 cut(s) 1241
RsaI GTAC 2 cut(s) 502, 937
RsaNI GTAC 2 cut(s) 501, 936
RseI CAYNNNNRTG 2 cut(s) 476, 540
SaqAI TTAA 4 cut(s) 255, 333, 417, 692
SatI GCNGC 1 cut(s) 674
Sau3AI GATC 4 cut(s) 637, 982, 1243, 1513
Sau96I GGNCC 4 cut(s) 431, 719, 1007, 1631
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 6 cut(s) 189, 441, 588, 718, 1063, 1421
SexAI ACCWGGT 1 cut(s) 586
SfaNI GCATC 2 cut(s) 835, 1417
SfcI CTRYAG 3 cut(s) 244, 303, 1340
SinI GGWCC 2 cut(s) 431, 1631
SmiMI CAYNNNNRTG 2 cut(s) 476, 540
SpeI ACTAGT 2 cut(s) 280, 965
SsiI CCGC 2 cut(s) 1366, 1629
SspI AATATT 1 cut(s) 1173
SspMI CTAG 5 cut(s) 281, 554, 966, 986, 1458
StyD4I CCNGG 6 cut(s) 187, 439, 586, 716, 1061, 1419
StyI CCWWGG 3 cut(s) 553, 609, 817
TaaI ACNGT 3 cut(s) 402, 500, 831
TaiI ACGT 1 cut(s) 1428
TaqI TCGA 1 cut(s) 773
TfiI GAWTC 2 cut(s) 7, 230
Tru1I TTAA 4 cut(s) 255, 333, 417, 692
Tru9I TTAA 4 cut(s) 255, 333, 417, 692
TscAI CASTG 4 cut(s) 729, 933, 1187, 1450
TseFI GTSAC 1 cut(s) 1125
TseI GCWGC 1 cut(s) 673
Tsp45I GTSAC 1 cut(s) 1125
TspGWI ACGGA 2 cut(s) 611, 1492
TspRI CASTG 4 cut(s) 729, 933, 1187, 1450
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 2 cut(s) 431, 1631
XagI CCTNNNNNAGG 1 cut(s) 1033
XapI RAATTY 6 cut(s) 391, 696, 886, 1102, 1264, 1607
XceI RCATGY 2 cut(s) 87, 481
XmaJI CCTAGG 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 922
XspI CTAG 5 cut(s) 281, 554, 966, 986, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.