Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

69106913 .. 69109435

Gene Structure 2523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG460100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGAGTGTTCAAGATTTTTGGGTGGTTATCTTTGTCATTGGCTTTTGCTTCCAGCCACCAGTTTTGAGCTCTCAGAACCTGACCTGCAATCTGAATGATTTGAATGCATTGGAGGAGTTCATGGGTGGTCTGAAAAGTGTCATTGGTGGTTGGGGCAAGAATTTCTCTGATGATTGCTGTAAATGGGCAGGAATTACTTGCAACTCTTCGTTCTCTCTTGGATTGGATGATTCTGTTGATACTTATAGAGTGGTTGAGTTGGATGTTTCGAGTAGAAAACTAATTGGGAATCTCTCTGAATCTCTGGGAAATTTGGAACAACTTAGAGCCCTCAATCTTTCTCACAACTTCCTTAAAAACTCACTTCCTGCCTCACTGTTCCAATTGCCAAATTTAGAGTACTTAGACTTGAGTTCTAATTACTTTTCTGGCCCCATTCCAGTTGATATTAATTTACCTTCACTTCTGTTCCTTGATATCTCTCAAAACTTCTTGAATGGTTCTATTCCACAAAGCATCTGTGCAAGTTCTACTAGGCTTCATGTACTGAACTTGGCTGTGAACTACTTGTCTGGTACTCTACCACCAAGTCTTGGAAATTGTAGTTCCTTGGAGGACCTCTGTCTCCTCACGAATAATCTCTCTGGTGGTGTACCTGAGGGTATATATCAGCTGCAAAATCTGACCAGATTGACTATTCAAGATAACAAGCTTACTGGGCCGCTGAGCAAAGAAGTTGGTAACCTGATTAACCTTAATCGTTTGGATATCTCAACGAATTGGTTTTCAGGGTCTATTCCGGATGTTTTCCACAGCCTTGGGAGACTACAGTATTTTGTTGCTCGTTCCAATAATTTCAGTGGTCAGATACCTCCTTCCTTGTCAAGTTCCCCAACTATCATTTTGCTTAATGTGAGAAACAATTCAATGGAGGGTCCAATTGATCTAAATTGTTCAGCAATGACAAGTTTAGCCTCTCTTGATCTAGGTTCAAACCAGTTTGCTGGGGAAATTCCATCCAATCTTCCCTCTTGTCGGCATTTGAATAATATAAATCTTGCCCGGAACAACTTGAGTGGCCAAATACCTGACAGCTTCAAGGATTTTCATACTCTCAATTACCTCTCACTTTCAAACTCCAGCCGTTCTAATCTATCATCTGCCCTTCAAATTTTACAGCAGTGTCAGAATCTAACTACTTTGGTTCTCACCATGAACTTCTATGGTGAAGAATTGCCTGCCGATCCAAACCTTCATTTTGCAAAGTTGAAGGTTCTCATTATTGCAAACAGTAGGCTCACAGGTTCAATACCCCAGTGGTTGAGTAAGAGCAGCAGATTGCAGTTCTTGGATATATCCTGGAACCGCTTGGAAGGTACAGTTCCAGCTTGGTTTGGCAATTTTACTTATCTCTTCTACTTGGACATATCAAACAATTCTTTTACTGGGGATATCCCGAGAAGCTTAACTGGACTACAGAGCCTCATTTATTGGAATGGTTCCAAGGTTCAGGAACCTTCCCCTGATTTTCCTCTTTTCCAGAAAAAGAAGGTAAGTGCAAGGGGATTGCAGTACAATCAAGTTTGGAGCTTTCCACCGACGCTGGCACTTGGCAACAATTATTTGAGTGGACAGATCTGGCCAGAGTTTGGGAACCTGAAATCCCTTCATGTATTTGATTTAAAATTCAACAATTTATCTGGACCAATTCCAAGTTCTCTTGCTAATATGACCAGCTTAGAGGCTCTGGATTTGTCTCATAACAAGCTTTCAGGAATAATACCCAGTTCACTGACTAGTCTCAGTTTTTTGTCCAAGTTCAGTGTTGCATACAATCAATTAGAGGGGGCGATTCCTAGTGGAGTTCAATTTGGGACCTTCCCAGATTCAAGCTTTGAAGGGAATAGTCTTTGTGGTGACCATGCTTCTCCATGTCCATCAAAGGTGAATACTTCTCCCGTTCAAACCAGAAAATCAAGACTAGAATTAGGAGGAGTTTATATAGGAATAGCTGTGGGATTTGTATTTGGAGTAGCTTGTTTTATTGTAACAGATAGATATGTATGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

693

Amino Acids

76.07

Weight (kDa)

5.72

Isoelectric Point (pI)

34.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	86 - 141	5.4e-07	Leucine rich repeat
LRR_14	PF23598	100 - 330	2.9e-12	Leucine-rich repeat region
LRR_8	PF13855	535 - 590	1.9e-06	Leucine rich repeat
LRR_8	PF13855	555 - 614	1.8e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	92
AccB7I	CCANNNNNTGG	2 cut(s)	593, 1649
AccIII	TCCGGA	1 cut(s)	799
AciI	CCGC	2 cut(s)	722, 1366
AclWI	GGATC	1 cut(s)	1238
AcoI	YGGCCR	2 cut(s)	1078, 1640
AcsI	RAATTY	6 cut(s)	160, 310, 391, 1011, 1170, 1685
AfaI	GTAC	6 cut(s)	401, 546, 577, 654, 1378, 1574
AfiI	CCNNNNNNNGG	3 cut(s)	593, 1035, 1649
AhlI	ACTAGT	1 cut(s)	1796
AjnI	CCWGG	1 cut(s)	1358
AjuI	GAANNNNNNNTTGG	2 cut(s)	1699, 1731
AloI	GAACNNNNNNTCC	2 cut(s)	1646, 1678
Alw21I	GWGCWC	1 cut(s)	71
Alw26I	GTCTC	4 cut(s)	629, 817, 1761, 1805
AlwI	GGATC	1 cut(s)	1238
AlwNI	CAGNNNCTG	1 cut(s)	79
Ama87I	CYCGRG	1 cut(s)	1456
Aor13HI	TCCGGA	1 cut(s)	799
AoxI	GGCC	4 cut(s)	430, 719, 1078, 1640
ApeKI	GCWGC	2 cut(s)	673, 1332
ApoI	RAATTY	6 cut(s)	160, 310, 391, 1011, 1170, 1685
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	922
AspS9I	GGNCC	6 cut(s)	431, 616, 719, 935, 1703, 1875
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	4 cut(s)	1201, 1238, 1928, 1957
AvaI	CYCGRG	1 cut(s)	1456
AvaII	GGWCC	4 cut(s)	616, 935, 1703, 1875
AxyI	CCTNAGG	1 cut(s)	657
BalI	TGGCCA	2 cut(s)	1080, 1642
BanII	GRGCYC	2 cut(s)	71, 331
Bbv12I	GWGCWC	1 cut(s)	71
BbvI	GCAGC	2 cut(s)	660, 1344
BccI	CCATC	2 cut(s)	1024, 1945
BceAI	ACGGC	1 cut(s)	1128
BciT130I	CCWGG	1 cut(s)	1360
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	4 cut(s)	629, 817, 1761, 1805
BcuI	ACTAGT	1 cut(s)	1796
BfaI	CTAG	5 cut(s)	534, 986, 1797, 1857, 1982
BfmI	CTRYAG	2 cut(s)	827, 1475
BfuAI	ACCTGC	1 cut(s)	92
BglII	AGATCT	1 cut(s)	1635
BisI	GCNGC	3 cut(s)	674, 722, 1333
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	3 cut(s)	675, 723, 1334
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	2 cut(s)	1063, 1360
Bme18I	GGWCC	4 cut(s)	616, 935, 1703, 1875
BmeT110I	CYCGRG	1 cut(s)	1456
BmgT120I	GGNCC	6 cut(s)	431, 616, 719, 935, 1703, 1875
BmiI	GGNNCC	7 cut(s)	433, 936, 1364, 1501, 1515, 1655, 1876
BmrFI	CCNGG	2 cut(s)	1063, 1360
BmrI	ACTGGG	4 cut(s)	726, 1309, 1455, 1779
BmsI	GCATC	1 cut(s)	525
BmuI	ACTGGG	4 cut(s)	726, 1309, 1455, 1779
BoxI	GACNNNNGTC	1 cut(s)	621
BpmI	CTGGAG	1 cut(s)	1123
Bpu1102I	GCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	2 cut(s)	430, 1093
BpuMI	CCSGG	1 cut(s)	1063
BsaJI	CCNNGG	3 cut(s)	609, 817, 1503
BsaWI	WCCGGW	1 cut(s)	799
Bsc4I	CCNNNNNNNGG	3 cut(s)	593, 1035, 1649
Bse1I	ACTGG	8 cut(s)	59, 440, 721, 997, 1315, 1450, 1474, 1785
Bse21I	CCTNAGG	1 cut(s)	657
Bse3DI	GCAATG	1 cut(s)	966
BseAI	TCCGGA	1 cut(s)	799
BseBI	CCWGG	1 cut(s)	1360
BseDI	CCNNGG	3 cut(s)	609, 817, 1503
BseGI	GGATG	4 cut(s)	232, 268, 808, 1016
BseLI	CCNNNNNNNGG	3 cut(s)	593, 1035, 1649
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	4 cut(s)	86, 648, 716, 1816
BseNI	ACTGG	8 cut(s)	59, 440, 721, 997, 1315, 1450, 1474, 1785
BseRI	GAGGAG	3 cut(s)	128, 617, 2007
BseXI	GCAGC	2 cut(s)	660, 1344
BseYI	CCCAGC	1 cut(s)	1004
BshFI	GGCC	4 cut(s)	432, 721, 1080, 1642
BsiHKAI	GWGCWC	1 cut(s)	71
BsiHKCI	CYCGRG	1 cut(s)	1456
BsiSI	CCGG	2 cut(s)	800, 1063
BslFI	GGGAC	1 cut(s)	1888
BslI	CCNNNNNNNGG	3 cut(s)	593, 1035, 1649
BsmAI	GTCTC	4 cut(s)	629, 817, 1761, 1805
BsmFI	GGGAC	1 cut(s)	1888
BsmI	GAATGC	1 cut(s)	109
BsnI	GGCC	4 cut(s)	432, 721, 1080, 1642
BsoBI	CYCGRG	1 cut(s)	1456
Bsp1286I	GDGCHC	2 cut(s)	71, 331
Bsp13I	TCCGGA	1 cut(s)	799
Bsp143I	GATC	4 cut(s)	943, 982, 1243, 1635
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	2 cut(s)	722, 1366
BspANI	GGCC	4 cut(s)	432, 721, 1080, 1642
BspCNI	CTCAG	4 cut(s)	85, 649, 717, 1815
BspEI	TCCGGA	1 cut(s)	799
BspLI	GGNNCC	7 cut(s)	433, 936, 1364, 1501, 1515, 1655, 1876
BspMI	ACCTGC	1 cut(s)	92
BspPI	GGATC	1 cut(s)	1238
BsrDI	GCAATG	1 cut(s)	966
BsrI	ACTGG	8 cut(s)	59, 440, 721, 997, 1315, 1450, 1474, 1785
BssECI	CCNNGG	3 cut(s)	609, 817, 1503
BssMI	GATC	4 cut(s)	943, 982, 1243, 1635
BssT1I	CCWWGG	3 cut(s)	609, 817, 1503
Bst2UI	CCWGG	1 cut(s)	1360
Bst4CI	ACNGT	4 cut(s)	378, 831, 1292, 1381
Bst6I	CTCTTC	2 cut(s)	211, 1418
BstC8I	GCNNGC	2 cut(s)	1239, 1605
BstDEI	CTNAG	7 cut(s)	72, 323, 403, 657, 725, 1738, 1802
BstEII	GGTNACC	2 cut(s)	740, 1916
BstF5I	GGATG	4 cut(s)	232, 268, 808, 1016
BstKTI	GATC	4 cut(s)	946, 985, 1246, 1638
BstMAI	GTCTC	4 cut(s)	629, 817, 1761, 1805
BstMBI	GATC	4 cut(s)	943, 982, 1243, 1635
BstMWI	GCNNNNNNNGC	1 cut(s)	718
BstNI	CCWGG	1 cut(s)	1360
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	2 cut(s)	740, 1916
BstSCI	CCNGG	2 cut(s)	1061, 1358
BstSFI	CTRYAG	2 cut(s)	827, 1475
BstV1I	GCAGC	2 cut(s)	660, 1344
BstX2I	RGATCY	1 cut(s)	1635
BstXI	CCANNNNNNTGG	2 cut(s)	818, 1004
BstYI	RGATCY	1 cut(s)	1635
Bsu36I	CCTNAGG	1 cut(s)	657
BsuRI	GGCC	4 cut(s)	432, 721, 1080, 1642
BtsCI	GGATG	4 cut(s)	232, 268, 808, 1016
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	6 cut(s)	374, 865, 1187, 1322, 1790, 1828
BveI	ACCTGC	1 cut(s)	92
Cac8I	GCNNGC	2 cut(s)	1239, 1605
CaiI	CAGNNNCTG	1 cut(s)	79
Cfr13I	GGNCC	6 cut(s)	431, 616, 719, 935, 1703, 1875
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
CspCI	CAANNNNNGTGG	4 cut(s)	45, 80, 1057, 1092
CviAII	CATG	6 cut(s)	121, 542, 1213, 1670, 1922, 1932
CviQI	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
DdeI	CTNAG	7 cut(s)	72, 323, 403, 657, 725, 1738, 1802
DpnI	GATC	4 cut(s)	945, 984, 1245, 1637
DpnII	GATC	4 cut(s)	943, 982, 1243, 1635
DraI	TTTAAA	1 cut(s)	1683
EaeI	YGGCCR	2 cut(s)	1078, 1640
Eam1104I	CTCTTC	2 cut(s)	211, 1418
EarI	CTCTTC	2 cut(s)	211, 1418
Ecl136II	GAGCTC	1 cut(s)	69
Eco130I	CCWWGG	3 cut(s)	609, 817, 1503
Eco24I	GRGCYC	2 cut(s)	71, 331
Eco32I	GATATC	3 cut(s)	478, 769, 1453
Eco47I	GGWCC	4 cut(s)	616, 935, 1703, 1875
Eco53kI	GAGCTC	1 cut(s)	69
Eco81I	CCTNAGG	1 cut(s)	657
Eco88I	CYCGRG	1 cut(s)	1456
Eco91I	GGTNACC	2 cut(s)	740, 1916
EcoICRI	GAGCTC	1 cut(s)	69
EcoO109I	RGGNCCY	2 cut(s)	616, 1875
EcoO65I	GGTNACC	2 cut(s)	740, 1916
EcoRII	CCWGG	1 cut(s)	1358
EcoRV	GATATC	3 cut(s)	478, 769, 1453
EcoT14I	CCWWGG	3 cut(s)	609, 817, 1503
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	2 cut(s)	71, 331
ErhI	CCWWGG	3 cut(s)	609, 817, 1503
FaeI	CATG	6 cut(s)	124, 545, 1216, 1673, 1925, 1935
FaqI	GGGAC	1 cut(s)	1888
FatI	CATG	6 cut(s)	120, 541, 1212, 1669, 1921, 1931
Fnu4HI	GCNGC	3 cut(s)	674, 722, 1333
FokI	GGATG	4 cut(s)	239, 275, 815, 1003
FriOI	GRGCYC	2 cut(s)	71, 331
Fsp4HI	GCNGC	3 cut(s)	674, 722, 1333
FspBI	CTAG	5 cut(s)	534, 986, 1797, 1857, 1982
GluI	GCNGC	3 cut(s)	674, 722, 1333
GsaI	CCCAGC	1 cut(s)	1008
GsuI	CTGGAG	1 cut(s)	1123
HaeIII	GGCC	4 cut(s)	432, 721, 1080, 1642
HapII	CCGG	2 cut(s)	800, 1063
HgaI	GACGC	1 cut(s)	1609
Hin1II	CATG	6 cut(s)	124, 545, 1216, 1673, 1925, 1935
HindIII	AAGCTT	4 cut(s)	710, 1462, 1766, 1891
HinfI	GANTC	6 cut(s)	230, 289, 299, 1189, 1852, 1886
HpaII	CCGG	2 cut(s)	800, 1063
HphI	GGTGA	4 cut(s)	1201, 1238, 1928, 1957
Hpy166II	GTNNAC	4 cut(s)	562, 653, 1631, 1790
Hpy188I	TCNGA	8 cut(s)	75, 93, 132, 169, 298, 684, 867, 1188
Hpy8I	GTNNAC	4 cut(s)	562, 653, 1631, 1790
Hpy99I	CGWCG	1 cut(s)	1603
HpyCH4III	ACNGT	4 cut(s)	378, 831, 1292, 1381
HpyF10VI	GCNNNNNNNGC	1 cut(s)	718
HpyF3I	CTNAG	7 cut(s)	72, 323, 403, 657, 725, 1738, 1802
Hsp92II	CATG	6 cut(s)	124, 545, 1216, 1673, 1925, 1935
Kpn2I	TCCGGA	1 cut(s)	799
Kzo9I	GATC	4 cut(s)	943, 982, 1243, 1635
LmnI	GCTCC	1 cut(s)	1587
Lsp1109I	GCAGC	2 cut(s)	660, 1344
LweI	GCATC	1 cut(s)	525
MaeI	CTAG	5 cut(s)	534, 986, 1797, 1857, 1982
MaeIII	GTNAC	3 cut(s)	740, 1916, 2047
MalI	GATC	4 cut(s)	945, 984, 1245, 1637
MboI	GATC	4 cut(s)	943, 982, 1243, 1635
MboII	GAAGA	4 cut(s)	198, 1016, 1241, 1405
MfeI	CAATTG	2 cut(s)	383, 939
MflI	RGATCY	1 cut(s)	1635
MhlI	GDGCHC	2 cut(s)	71, 331
MlsI	TGGCCA	2 cut(s)	1080, 1642
MluNI	TGGCCA	2 cut(s)	1080, 1642
MmeI	TCCRAC	1 cut(s)	240
Mox20I	TGGCCA	2 cut(s)	1080, 1642
Mph1103I	ATGCAT	1 cut(s)	109
MroI	TCCGGA	1 cut(s)	799
MroXI	GAANNNNTTC	1 cut(s)	922
MscI	TGGCCA	2 cut(s)	1080, 1642
MseI	TTAA	7 cut(s)	354, 450, 750, 756, 909, 1466, 1682
Msp20I	TGGCCA	2 cut(s)	1080, 1642
MspA1I	CMGCKG	2 cut(s)	673, 724
MspI	CCGG	2 cut(s)	800, 1063
MspR9I	CCNGG	2 cut(s)	1063, 1360
MunI	CAATTG	2 cut(s)	383, 939
Mva1269I	GAATGC	1 cut(s)	109
MvaI	CCWGG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	1 cut(s)	718
NciI	CCSGG	1 cut(s)	1063
NdeII	GATC	4 cut(s)	943, 982, 1243, 1635
NlaIII	CATG	6 cut(s)	124, 545, 1216, 1673, 1925, 1935
NlaIV	GGNNCC	7 cut(s)	433, 936, 1364, 1501, 1515, 1655, 1876
NmuCI	GTSAC	1 cut(s)	1916
NsiI	ATGCAT	1 cut(s)	109
PctI	GAATGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	922
PfeI	GAWTC	6 cut(s)	230, 289, 299, 1189, 1852, 1886
PflMI	CCANNNNNTGG	2 cut(s)	593, 1649
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	3 cut(s)	675, 723, 1334
PpuMI	RGGWCCY	2 cut(s)	616, 1875
PshAI	GACNNNNGTC	1 cut(s)	621
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	71
Psp5II	RGGWCCY	2 cut(s)	616, 1875
Psp6I	CCWGG	1 cut(s)	1358
PspEI	GGTNACC	2 cut(s)	740, 1916
PspFI	CCCAGC	1 cut(s)	1004
PspGI	CCWGG	1 cut(s)	1358
PspN4I	GGNNCC	7 cut(s)	433, 936, 1364, 1501, 1515, 1655, 1876
PspPI	GGNCC	6 cut(s)	431, 616, 719, 935, 1703, 1875
PspPPI	RGGWCCY	2 cut(s)	616, 1875
PstNI	CAGNNNCTG	1 cut(s)	79
PsuI	RGATCY	1 cut(s)	1635
PvuII	CAGCTG	1 cut(s)	673
RsaI	GTAC	6 cut(s)	401, 546, 577, 654, 1378, 1574
RsaNI	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
SacI	GAGCTC	1 cut(s)	71
SaqAI	TTAA	7 cut(s)	354, 450, 750, 756, 909, 1466, 1682
SatI	GCNGC	3 cut(s)	674, 722, 1333
Sau3AI	GATC	4 cut(s)	943, 982, 1243, 1635
Sau96I	GGNCC	6 cut(s)	431, 616, 719, 935, 1703, 1875
ScaI	AGTACT	1 cut(s)	401
ScrFI	CCNGG	2 cut(s)	1063, 1360
SduI	GDGCHC	2 cut(s)	71, 331
SfaNI	GCATC	1 cut(s)	525
SfcI	CTRYAG	2 cut(s)	827, 1475
SinI	GGWCC	4 cut(s)	616, 935, 1703, 1875
SmlI	CTYRAG	2 cut(s)	409, 1072
SmoI	CTYRAG	2 cut(s)	409, 1072
SpeI	ACTAGT	1 cut(s)	1796
SsiI	CCGC	2 cut(s)	722, 1366
SspMI	CTAG	5 cut(s)	534, 986, 1797, 1857, 1982
SstI	GAGCTC	1 cut(s)	71
StyD4I	CCNGG	2 cut(s)	1061, 1358
StyI	CCWWGG	3 cut(s)	609, 817, 1503
TaaI	ACNGT	4 cut(s)	378, 831, 1292, 1381
TaqI	TCGA	1 cut(s)	269
TatI	WGTACW	3 cut(s)	399, 544, 1572
TauI	GCSGC	1 cut(s)	724
TfiI	GAWTC	6 cut(s)	230, 289, 299, 1189, 1852, 1886
Tru1I	TTAA	7 cut(s)	354, 450, 750, 756, 909, 1466, 1682
Tru9I	TTAA	7 cut(s)	354, 450, 750, 756, 909, 1466, 1682
TscAI	CASTG	6 cut(s)	381, 865, 1187, 1322, 1797, 1828
TseFI	GTSAC	1 cut(s)	1916
TseI	GCWGC	2 cut(s)	673, 1332
Tsp45I	GTSAC	1 cut(s)	1916
TspDTI	ATGAA	6 cut(s)	109, 530, 1097, 1229, 1244, 1658
TspRI	CASTG	6 cut(s)	381, 865, 1187, 1322, 1797, 1828
Van91I	CCANNNNNTGG	2 cut(s)	593, 1649
VpaK11BI	GGWCC	4 cut(s)	616, 935, 1703, 1875
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	6 cut(s)	160, 310, 391, 1011, 1170, 1685
XmnI	GAANNNNTTC	1 cut(s)	922
XspI	CTAG	5 cut(s)	534, 986, 1797, 1857, 1982
ZrmI	AGTACT	1 cut(s)	401
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.