RLG00000005686

Phytosulfokine receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
815189 .. 817600
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005686

Sequence Viewer

Length: 1821 bp
ATGGGTGTCCAAGACTTCAGGGTGATTCTTTTTGTTATTGGGTTTTGCTTTCAAGCTCAGGTTTTGATCTCTCAGAACCTGACGTGTCATACAAATGATTTGAATGCATTGGAGGATTTCATGCGTGGTCTGCAAAGTGCCATTGATGGCTGGGGCAATAGTTTCTCTTCTGATTGCTGTAAATGGGCAGGTATCAATTGTAACTCTTCATCTTCTCTTGGACTTAACGATTCGGTTGATACTTATAGAGTGATTGAGTTGGATCTTTCAAGTAAAAGACTAATGGGGAATCTCTCTGAATCTTTGGGCAATTTGGAACAACTTAGAGCCCTCAACCTCTCTCACAATTTCCTCAAATACTCACTTCCCATGAACCTGTTTCGATTGCCAAATTTAGAGCTCTTAGACTTGAGCTCTAATGATTTCTCTGGCCCCATTCCAGTTGATATTAATTTACCATCAATTCAGTCTTTTGACATGTCTCAGAACTTGTTGAGTGGTTCTATTTCGCATAGCTTCTGTGCTAATCAAACTGAGCTTCGGGTGCTGAACTTGGCAGATAATTACTTGTCTGGTAACCTCCCACCGGGTCTTGGGAATTGTAGCTCCTTGGAGGCCATTCATCTCGGCACAAATAGTCTCTCAGGTGCACCTGAAGGTCTATTTGGGCTGCAAAAGCTAACCCAATTGGATATTCAAGAGAACAAATTTTCCGGGGAGCTTAGGGAAGTTGGTAACCTCATTAATCTTGTTAGCTTGGATATCTCAACTAATTGGTTTTCAGGAACCATCCCAGATGTTTTTCACAGCCTTGGAAGAAAGCTTCAAGAATTTTCAGACTCTCTCTTACCTCTCAATTTCAAACGCCAGCTTTCTAATCTTTCATCTGCCCTTCAAATTTTACGACAGTGTGAGAACCTAACTACTTTGGCTCTCGCCATGAACTTCTATGGTGAAGTTTTTCCTGCTGATCCAACCCTTCATTTTGCAAGGTTGAAGGTTCTCATAATTGCAAATTGTAGGCTCACAGGTCCAATCCCCCAGTGGTTAAGTAACAGCAGGAGATTGCAGTTGTTGGATTTATCTTGGAACTTCTTGGATGGAACAATCCCAATGTGGTTTGGCCATTTTAATCATCTCTTCTACCTAGACTTATCGAATAATTCATTCACTGGGAATGTCCCTAGAAGCATAACTGGACTGCCGAGGCTCATTACTGGGAACATCACATTTAAGGAACCATCCCCTGACATCGCCCTTTTCATGAAGAGGAGTGTAAGTACAAGGGGATTGCAGTATAATAATGTTTGGAGCTTCCCACCTACCTTGGCATTTAGCAACAATAATCTTAGTGGACCAATCTGGCCAGAATTTGGGAACCTGAAAGTGCTCCATGTTTTGGATCTGGGATTCAACAGTCTATCAGGACCAATCCCAAGTAGTTTATCTTGGATGACCAACTTGGAGACTATGGATTTGTCTCATAACAAGCTTTCAGGGGCAATACCGCCTTCGTTGATTCGTCTCAGCTTTTTGTCCAAATTTAGTGTTGCATACAATCAATTAGAGGGGGAGATCCCTACAGGAGGTCAGTTTATGACCTTCCCAAATTCAAGCTTTGAAGGGAATAGTAATCTTTGTGGCTTCCATGCTCCCTCTTGTCCATCAAATTCAACTCCAGAAGTGGAAAGTGCACCACCGCCACCCAGGAAATCAAGAGTAGAATTAGAAGGAGTTTATATAGGAATAGCTGTGGGATTTGTATTTGGAGTAGCTTGTTTTATTGTAACAGAAAGATATGTATGGACTTGGCATTTCTAA

Protein Analysis

607

Amino Acids

67.03

Weight (kDa)

5.49

Isoelectric Point (pI)

35.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 159 - 389 6.2e-09 Leucine-rich repeat region
LRR_8 PF13855 179 - 237 3.4e-06 Leucine rich repeat
LRR_8 PF13855 331 - 389 5.8e-08 Leucine rich repeat
LRR_8 PF13855 354 - 404 1.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 179
AccB7I CCANNNNNTGG 2 cut(s) 1373, 1399
AciI CCGC 2 cut(s) 1508, 1700
AclWI GGATC 4 cut(s) 270, 965, 1410, 1570
AcoI YGGCCR 2 cut(s) 1123, 1364
AcsI RAATTY 8 cut(s) 391, 707, 830, 897, 1370, 1541, 1609, 1669
AcuI CTGAAG 1 cut(s) 675
AfaI GTAC 1 cut(s) 1282
AfiI CCNNNNNNNGG 5 cut(s) 586, 593, 1373, 1399, 1586
AflIII ACRYGT 2 cut(s) 83, 477
AjiI CACGTC 1 cut(s) 84
AjnI CCWGG 1 cut(s) 1706
AjuI GAANNNNNNNTTGG 4 cut(s) 648, 678, 680, 710
AloI GAACNNNNNNTCC 2 cut(s) 695, 727
Alw21I GWGCWC 5 cut(s) 402, 416, 652, 1392, 1696
Alw26I GTCTC 5 cut(s) 486, 644, 1460, 1485, 1529
Alw44I GTGCAC 2 cut(s) 648, 1692
AlwI GGATC 4 cut(s) 270, 965, 1410, 1570
AlwNI CAGNNNCTG 1 cut(s) 79
AoxI GGCC 4 cut(s) 430, 615, 1123, 1364
ApaLI GTGCAC 2 cut(s) 648, 1692
ApeKI GCWGC 1 cut(s) 670
ApoI RAATTY 8 cut(s) 391, 707, 830, 897, 1370, 1541, 1609, 1669
ArsI GACNNNNNNTTYG 2 cut(s) 1459, 1491
AseI ATTAAT 2 cut(s) 450, 744
Asp700I GAANNNNTTC 1 cut(s) 960
AspS9I GGNCC 4 cut(s) 431, 1031, 1355, 1427
AsuC2I CCSGG 2 cut(s) 588, 715
AsuHPI GGTGA 2 cut(s) 34, 965
AvaII GGWCC 3 cut(s) 1031, 1355, 1427
BaeGI GKGCMC 2 cut(s) 652, 1696
BalI TGGCCA 2 cut(s) 1125, 1366
BanII GRGCYC 3 cut(s) 331, 402, 416
Bbv12I GWGCWC 5 cut(s) 402, 416, 652, 1392, 1696
BbvI GCAGC 1 cut(s) 657
BccI CCATC 6 cut(s) 140, 466, 797, 1094, 1249, 1672
BciT130I CCWGG 1 cut(s) 1708
BcnI CCSGG 2 cut(s) 588, 715
BcoDI GTCTC 5 cut(s) 486, 644, 1460, 1485, 1529
BfaI CTAG 2 cut(s) 1148, 1185
BfmI CTRYAG 1 cut(s) 1581
BfuAI ACCTGC 1 cut(s) 179
BisI GCNGC 1 cut(s) 671
BlsI GCNGC 1 cut(s) 672
Bme1390I CCNGG 3 cut(s) 588, 715, 1708
Bme18I GGWCC 3 cut(s) 1031, 1355, 1427
BmgBI CACGTC 1 cut(s) 84
BmgT120I GGNCC 4 cut(s) 431, 1031, 1355, 1427
BmiI GGNNCC 4 cut(s) 433, 787, 1239, 1379
BmrFI CCNGG 3 cut(s) 588, 715, 1708
BmrI ACTGGG 3 cut(s) 1036, 1182, 1227
BmuI ACTGGG 3 cut(s) 1036, 1182, 1227
BpmI CTGGAG 1 cut(s) 1662
Bpu10I CCTNAGC 2 cut(s) 57, 722
BpuEI CTTGAG 1 cut(s) 430
BpuMI CCSGG 2 cut(s) 588, 715
BsaJI CCNNGG 6 cut(s) 609, 714, 811, 1205, 1326, 1706
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bsc4I CCNNNNNNNGG 5 cut(s) 586, 593, 1373, 1399, 1586
Bse1I ACTGG 5 cut(s) 440, 1042, 1177, 1201, 1222
BseBI CCWGG 1 cut(s) 1708
BseDI CCNNGG 6 cut(s) 609, 714, 811, 1205, 1326, 1706
BseGI GGATG 4 cut(s) 789, 1105, 1241, 1458
BseLI CCNNNNNNNGG 5 cut(s) 586, 593, 1373, 1399, 1586
BseMII CTCAG 6 cut(s) 71, 86, 497, 525, 657, 1540
BseNI ACTGG 5 cut(s) 440, 1042, 1177, 1201, 1222
BseRI GAGGAG 1 cut(s) 1285
BseSI GKGCMC 2 cut(s) 652, 1696
BseXI GCAGC 1 cut(s) 657
BseYI CCCAGC 1 cut(s) 150
BshFI GGCC 4 cut(s) 432, 617, 1125, 1366
BsiHKAI GWGCWC 5 cut(s) 402, 416, 652, 1392, 1696
BsiSI CCGG 2 cut(s) 587, 714
BslFI GGGAC 1 cut(s) 1166
BslI CCNNNNNNNGG 5 cut(s) 586, 593, 1373, 1399, 1586
BsmAI GTCTC 5 cut(s) 486, 644, 1460, 1485, 1529
BsmBI CGTCTC 1 cut(s) 1529
BsmFI GGGAC 1 cut(s) 1166
BsmI GAATGC 1 cut(s) 109
BsnI GGCC 4 cut(s) 432, 617, 1125, 1366
Bsp1286I GDGCHC 6 cut(s) 331, 402, 416, 652, 1392, 1696
Bsp143I GATC 5 cut(s) 66, 262, 970, 1402, 1575
BspACI CCGC 2 cut(s) 1508, 1700
BspANI GGCC 4 cut(s) 432, 617, 1125, 1366
BspCNI CTCAG 6 cut(s) 70, 85, 496, 526, 656, 1539
BspHI TCATGA 1 cut(s) 1263
BspLI GGNNCC 4 cut(s) 433, 787, 1239, 1379
BspMI ACCTGC 1 cut(s) 179
BspPI GGATC 4 cut(s) 270, 965, 1410, 1570
BsrI ACTGG 5 cut(s) 440, 1042, 1177, 1201, 1222
BssECI CCNNGG 6 cut(s) 609, 714, 811, 1205, 1326, 1706
BssMI GATC 5 cut(s) 66, 262, 970, 1402, 1575
BssT1I CCWWGG 3 cut(s) 609, 811, 1326
Bst2UI CCWGG 1 cut(s) 1708
Bst4CI ACNGT 2 cut(s) 909, 1418
Bst6I CTCTTC 4 cut(s) 172, 211, 1145, 1262
BstC8I GCNNGC 1 cut(s) 869
BstEII GGTNACC 2 cut(s) 575, 734
BstENI CCTNNNNNAGG 1 cut(s) 1584
BstF5I GGATG 4 cut(s) 789, 1105, 1241, 1458
BstKTI GATC 5 cut(s) 69, 265, 973, 1405, 1578
BstMAI GTCTC 5 cut(s) 486, 644, 1460, 1485, 1529
BstMBI GATC 5 cut(s) 66, 262, 970, 1402, 1575
BstMWI GCNNNNNNNGC 3 cut(s) 130, 544, 676
BstNI CCWGG 1 cut(s) 1708
BstNSI RCATGY 1 cut(s) 481
BstPI GGTNACC 2 cut(s) 575, 734
BstSCI CCNGG 3 cut(s) 586, 713, 1706
BstSFI CTRYAG 1 cut(s) 1581
BstSLI GKGCMC 2 cut(s) 652, 1696
BstV1I GCAGC 1 cut(s) 657
BstX2I RGATCY 3 cut(s) 262, 1402, 1575
BstYI RGATCY 3 cut(s) 262, 1402, 1575
BsuRI GGCC 4 cut(s) 432, 617, 1125, 1366
BtgZI GCGATG 1 cut(s) 1237
BtrI CACGTC 1 cut(s) 84
BtsCI GGATG 4 cut(s) 789, 1105, 1241, 1458
BtsIMutI CAGTG 3 cut(s) 914, 1049, 1170
BveI ACCTGC 1 cut(s) 179
Cac8I GCNNGC 1 cut(s) 869
CaiI CAGNNNCTG 1 cut(s) 79
CciI TCATGA 1 cut(s) 1263
Cfr13I GGNCC 4 cut(s) 431, 1031, 1355, 1427
Csp6I GTAC 1 cut(s) 1281
CspCI CAANNNNNGTGG 2 cut(s) 1308, 1343
CviAII CATG 7 cut(s) 121, 370, 478, 940, 1264, 1394, 1649
CviQI GTAC 1 cut(s) 1281
DpnI GATC 5 cut(s) 68, 264, 972, 1404, 1577
DpnII GATC 5 cut(s) 66, 262, 970, 1402, 1575
EaeI YGGCCR 2 cut(s) 1123, 1364
Eam1104I CTCTTC 4 cut(s) 172, 211, 1145, 1262
EarI CTCTTC 4 cut(s) 172, 211, 1145, 1262
Ecl136II GAGCTC 2 cut(s) 400, 414
Eco130I CCWWGG 3 cut(s) 609, 811, 1326
Eco24I GRGCYC 3 cut(s) 331, 402, 416
Eco32I GATATC 1 cut(s) 763
Eco47I GGWCC 3 cut(s) 1031, 1355, 1427
Eco53kI GAGCTC 2 cut(s) 400, 414
Eco57I CTGAAG 1 cut(s) 675
Eco91I GGTNACC 2 cut(s) 575, 734
EcoICRI GAGCTC 2 cut(s) 400, 414
EcoNI CCTNNNNNAGG 1 cut(s) 1584
EcoO65I GGTNACC 2 cut(s) 575, 734
EcoRII CCWGG 1 cut(s) 1706
EcoRV GATATC 1 cut(s) 763
EcoT14I CCWWGG 3 cut(s) 609, 811, 1326
EcoT22I ATGCAT 1 cut(s) 109
EcoT38I GRGCYC 3 cut(s) 331, 402, 416
ErhI CCWWGG 3 cut(s) 609, 811, 1326
Esp3I CGTCTC 1 cut(s) 1529
FaeI CATG 7 cut(s) 124, 373, 481, 943, 1267, 1397, 1652
FaqI GGGAC 1 cut(s) 1166
FatI CATG 7 cut(s) 120, 369, 477, 939, 1263, 1393, 1648
Fnu4HI GCNGC 1 cut(s) 671
FokI GGATG 4 cut(s) 776, 1112, 1228, 1465
FriOI GRGCYC 3 cut(s) 331, 402, 416
Fsp4HI GCNGC 1 cut(s) 671
FspBI CTAG 2 cut(s) 1148, 1185
GluI GCNGC 1 cut(s) 671
GsaI CCCAGC 1 cut(s) 154
GsuI CTGGAG 1 cut(s) 1662
HaeIII GGCC 4 cut(s) 432, 617, 1125, 1366
HapII CCGG 2 cut(s) 587, 714
Hin1II CATG 7 cut(s) 124, 373, 481, 943, 1267, 1397, 1652
HindIII AAGCTT 3 cut(s) 821, 1490, 1615
HinfI GANTC 7 cut(s) 25, 230, 289, 299, 839, 1410, 1519
HpaII CCGG 2 cut(s) 587, 714
HphI GGTGA 2 cut(s) 34, 965
Hpy166II GTNNAC 3 cut(s) 650, 1355, 1694
Hpy188I TCNGA 5 cut(s) 75, 172, 298, 486, 838
Hpy188III TCNNGA 7 cut(s) 698, 783, 827, 1264, 1425, 1679, 1716
Hpy8I GTNNAC 3 cut(s) 650, 1355, 1694
HpyAV CCTTC 8 cut(s) 650, 902, 989, 991, 1521, 1612, 1616, 1724
HpyCH4III ACNGT 2 cut(s) 909, 1418
HpyCH4IV ACGT 1 cut(s) 83
HpyF10VI GCNNNNNNNGC 3 cut(s) 130, 544, 676
HpySE526I ACGT 1 cut(s) 83
Hsp92II CATG 7 cut(s) 124, 373, 481, 943, 1267, 1397, 1652
Kzo9I GATC 5 cut(s) 66, 262, 970, 1402, 1575
LmnI GCTCC 5 cut(s) 611, 718, 1311, 1395, 1657
Lsp1109I GCAGC 1 cut(s) 657
MaeI CTAG 2 cut(s) 1148, 1185
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 5 cut(s) 200, 575, 734, 1052, 1786
MalI GATC 5 cut(s) 68, 264, 972, 1404, 1577
MboI GATC 5 cut(s) 66, 262, 970, 1402, 1575
MboII GAAGA 6 cut(s) 159, 198, 204, 828, 1132, 1279
MfeI CAATTG 2 cut(s) 196, 686
MflI RGATCY 3 cut(s) 262, 1402, 1575
MhlI GDGCHC 6 cut(s) 331, 402, 416, 652, 1392, 1696
MlsI TGGCCA 2 cut(s) 1125, 1366
MluNI TGGCCA 2 cut(s) 1125, 1366
MlyI GAGTC 1 cut(s) 833
MmeI TCCRAC 3 cut(s) 240, 998, 1056
Mox20I TGGCCA 2 cut(s) 1125, 1366
Mph1103I ATGCAT 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 2 cut(s) 1125, 1366
MseI TTAA 6 cut(s) 225, 450, 744, 1049, 1131, 1233
MslI CAYNNNNRTG 1 cut(s) 93
Msp20I TGGCCA 2 cut(s) 1125, 1366
MspI CCGG 2 cut(s) 587, 714
MspR9I CCNGG 3 cut(s) 588, 715, 1708
MunI CAATTG 2 cut(s) 196, 686
Mva1269I GAATGC 1 cut(s) 109
MvaI CCWGG 1 cut(s) 1708
MwoI GCNNNNNNNGC 3 cut(s) 130, 544, 676
NciI CCSGG 2 cut(s) 588, 715
NdeII GATC 5 cut(s) 66, 262, 970, 1402, 1575
NlaIII CATG 7 cut(s) 124, 373, 481, 943, 1267, 1397, 1652
NlaIV GGNNCC 4 cut(s) 433, 787, 1239, 1379
NmeAIII GCCGAG 2 cut(s) 606, 1230
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 481
PagI TCATGA 1 cut(s) 1263
PciI ACATGT 1 cut(s) 477
PctI GAATGC 1 cut(s) 109
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 6 cut(s) 25, 230, 289, 299, 1410, 1519
PflMI CCANNNNNTGG 2 cut(s) 1373, 1399
PkrI GCNGC 1 cut(s) 672
PleI GAGTC 1 cut(s) 833
PpsI GAGTC 1 cut(s) 833
PscI ACATGT 1 cut(s) 477
PshBI ATTAAT 2 cut(s) 450, 744
Psp124BI GAGCTC 2 cut(s) 402, 416
Psp6I CCWGG 1 cut(s) 1706
PspEI GGTNACC 2 cut(s) 575, 734
PspFI CCCAGC 1 cut(s) 150
PspGI CCWGG 1 cut(s) 1706
PspN4I GGNNCC 4 cut(s) 433, 787, 1239, 1379
PspPI GGNCC 4 cut(s) 431, 1031, 1355, 1427
PstNI CAGNNNCTG 1 cut(s) 79
PsuI RGATCY 3 cut(s) 262, 1402, 1575
RsaI GTAC 1 cut(s) 1282
RsaNI GTAC 1 cut(s) 1281
RseI CAYNNNNRTG 1 cut(s) 93
SacI GAGCTC 2 cut(s) 402, 416
SaqAI TTAA 6 cut(s) 225, 450, 744, 1049, 1131, 1233
SatI GCNGC 1 cut(s) 671
Sau3AI GATC 5 cut(s) 66, 262, 970, 1402, 1575
Sau96I GGNCC 4 cut(s) 431, 1031, 1355, 1427
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 3 cut(s) 588, 715, 1708
SduI GDGCHC 6 cut(s) 331, 402, 416, 652, 1392, 1696
SfcI CTRYAG 1 cut(s) 1581
SinI GGWCC 3 cut(s) 1031, 1355, 1427
SmiMI CAYNNNNRTG 1 cut(s) 93
SmlI CTYRAG 1 cut(s) 409
SmoI CTYRAG 1 cut(s) 409
SsiI CCGC 2 cut(s) 1508, 1700
SspMI CTAG 2 cut(s) 1148, 1185
SstI GAGCTC 2 cut(s) 402, 416
StyD4I CCNGG 3 cut(s) 586, 713, 1706
StyI CCWWGG 3 cut(s) 609, 811, 1326
TaaI ACNGT 2 cut(s) 909, 1418
TaiI ACGT 1 cut(s) 86
TaqI TCGA 2 cut(s) 382, 1157
TatI WGTACW 1 cut(s) 1280
TfiI GAWTC 6 cut(s) 25, 230, 289, 299, 1410, 1519
Tru1I TTAA 6 cut(s) 225, 450, 744, 1049, 1131, 1233
Tru9I TTAA 6 cut(s) 225, 450, 744, 1049, 1131, 1233
TscAI CASTG 3 cut(s) 914, 1049, 1177
TseI GCWGC 1 cut(s) 670
TspRI CASTG 3 cut(s) 914, 1049, 1177
Van91I CCANNNNNTGG 2 cut(s) 1373, 1399
VneI GTGCAC 2 cut(s) 648, 1692
VpaK11BI GGWCC 3 cut(s) 1031, 1355, 1427
VspI ATTAAT 2 cut(s) 450, 744
XagI CCTNNNNNAGG 1 cut(s) 1584
XapI RAATTY 8 cut(s) 391, 707, 830, 897, 1370, 1541, 1609, 1669
XceI RCATGY 1 cut(s) 481
XcmI CCANNNNNNNNNTGG 1 cut(s) 1041
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 2 cut(s) 1148, 1185
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.