Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

42666548 .. 42669108

Gene Structure 2561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG223500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGACAGGTTTATCTCCTGTTATTGATGGATGGGGAAATGATTTCTCTTCTGATTGCTGCAAATGGCCAGGTATCACTTGCAACTCTTCATCTTCTCTTGGACTGAATGATTCTCTTGATAGCTACAGAGTGGTTAAGTTGGAGCTTCCAAGTAGAAGACTAGTTGGCAACATTTCTGAATCTATAGGTAATTTGGAACAGCTTAGGATACTTAACCTATCAGACAATATCTTCAATGACACGCTTCCAATCTCTTTGTTTCATCTCCCAAATTTAGACCTCTTAGATCTAAGCTCTAATTTTATTTTTGGTCCCATTCCAGTTGTTTTTGATTTGCCTTCAATCCAGTCCCTTGACATTTCTGATAACAACTTGAGTGGTCCTCTTCCGGCAAGTATCTGTGTCAATTCACATCACCTTCGTGTACTAAACTTGGCTGTGAACTACTTTTCTGGTGACCTCCCACCAGGTCTTGGAAATTGTAGTTCCTTGCATGACCTCCATCTCTACGATAATGATCTCACAGGTGGAATATCTGAAAGCTTAGTTCGGCTACAAAATCTAACCCATTTGAGCATTCAAAGTAATAAGCTTTCCGGGATGCTGAGTGAAGTTAGTAACCTCATTAACCTTGTTCATTTGGATATCTCCATTTATTTGTTTTCAGGAACTATTCCGGATGTTTTCCACAGCCTTGGAAGATTACAGTACTTTGTTGCTCATTCAAATAATTTCAGTGGTCAGATACCCCTTTCCTTGTCAAATTCCCCAACTATCTCCATGCTTAATGTGAGAAACAATTCATTGTCAGGTCCAATTGATCTAAACTGTTCAGCAATGACAAGTTTGGCCTCTCTTGATCTAGGTTCAAACCAGTTTGATGGGGTTATTCCATCCAATCTTCCCTCTTGTCGGCATTTGAATAGTATAAATCTTGCCCGGAACAACTTGAGTGGCCAAATACCTGAAACCTTTAAGAATTTTCATACTCTCCATTACCTCTCACTTTCGAACGCCAGCCATTCTAATATATCATCTGCCCTTCAAATTTTACAGCAATGTCAGAATCTAACTACTTTGATTCTCACCATGAACTTCTATGATGAAGAATTGCTTGTTGATCCAACCATTCAGTTTGCAAAGTTGAAGGTTCTCATTATTGCAAATTGTAGGCTCACAGGTTCAATGCCCCAGTGGTTGAGTAACAGCAACATGTTGCAATTGCTAGATTTATCTTGGAACCGCTTTGAAGGAACAATTCCGGTCTGGTTTGGTAATTTCAGTAGTCTCTTCTACTTAGACATATCAAACAATTCTCTTACTGGAGATATCCCTAGAAGCTTAACTGAACTAAGGAGCCTCATTTATTGGAATATTTGCTCGGTTCAGGAACCTTCCCCTGAATTTCCTCTTTTCCAGAAAAAGAATACAAGTGAAAGGGGATTGCAGCACAATAAAGTTTCGAGCTTTCGACCTACGCTGGCACTGGGCAACAATAATCTCAGTGGAGAAATCTGGCCAGAGTTTGGGAACCTGAAATCCCTTCATGTATTGGATCTGAAATTCAACAGTCTGTCAGGACCAATTCCGAGTAGTTTATCTTCGATGACCAATTTAGAGACTCTGGATTTGTCTCATAACAAACTTTCAGGGGCAATACCACCCTCATTGGTTAATCTCTGCTCATTGTCCGAGTTTTCTGTCGCATACAATCAATTGGATGGAGAGATCCCTGCAGGACATCAGTTTGGGACCTTCCTAAATTCAAGCTTCGAAGGGAATAATCTTTGCGGCGATCCTGCTCCCCCTTGTCTATCTTTTTCAAAACCACTGCCACAGCCACACAGCAAATCAAGAGTAGAATACAGGGGTGTTGTCATTGGAATAGCAGTGGGATTTGTATTTGGAGTAGCTTGCTTTATTGTAACAGATAGATATGTATGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

652

Amino Acids

71.66

Weight (kDa)

5.43

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	111 - 263	8.8e-07	Leucine-rich repeat region
LRR_14	PF23598	281 - 463	1e-06	Leucine-rich repeat region
LRR_8	PF13855	282 - 338	8.6e-07	Leucine rich repeat
LRR_8	PF13855	381 - 440	2.6e-07	Leucine rich repeat
LRR_8	PF13855	493 - 549	2.9e-06	Leucine rich repeat
LRR_8	PF13855	514 - 573	3.1e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	473, 1526
AccIII	TCCGGA	1 cut(s)	676
AciI	CCGC	2 cut(s)	1243, 1791
AclWI	GGATC	4 cut(s)	1115, 1563, 1723, 1790
AcoI	YGGCCR	3 cut(s)	65, 955, 1517
AcsI	RAATTY	7 cut(s)	271, 763, 979, 1047, 1403, 1562, 1762
AfaI	GTAC	2 cut(s)	426, 710
AfiI	CCNNNNNNNGG	3 cut(s)	473, 912, 1526
AflIII	ACRYGT	1 cut(s)	1212
AhlI	ACTAGT	1 cut(s)	160
AjnI	CCWGG	2 cut(s)	67, 466
AleI	CACNNNNGTG	1 cut(s)	420
AloI	GAACNNNNNNTCC	2 cut(s)	1523, 1555
Alw26I	GTCTC	3 cut(s)	1292, 1613, 1638
AlwI	GGATC	4 cut(s)	1115, 1563, 1723, 1790
Aor13HI	TCCGGA	1 cut(s)	676
AoxI	GGCC	4 cut(s)	65, 849, 955, 1517
ApeKI	GCWGC	2 cut(s)	57, 1447
ApoI	RAATTY	7 cut(s)	271, 763, 979, 1047, 1403, 1562, 1762
ArsI	GACNNNNNNTTYG	2 cut(s)	1612, 1644
Asp700I	GAANNNNTTC	1 cut(s)	799
AspS9I	GGNCC	5 cut(s)	311, 380, 812, 1580, 1752
AsuC2I	CCSGG	2 cut(s)	598, 940
AsuHPI	GGTGA	3 cut(s)	407, 467, 1078
AsuII	TTCGAA	2 cut(s)	1010, 1773
AvaII	GGWCC	5 cut(s)	311, 380, 812, 1580, 1752
BalI	TGGCCA	3 cut(s)	67, 957, 1519
BarI	GAAGNNNNNNTAC	2 cut(s)	1585, 1617
BbsI	GAAGAC	1 cut(s)	163
BbvI	GCAGC	2 cut(s)	44, 1459
BccI	CCATC	6 cut(s)	20, 24, 510, 875, 901, 1715
BciT130I	CCWGG	2 cut(s)	69, 468
BciVI	GTATCC	1 cut(s)	201
BcnI	CCSGG	2 cut(s)	598, 940
BcoDI	GTCTC	3 cut(s)	1292, 1613, 1638
BcuI	ACTAGT	1 cut(s)	160
BfaI	CTAG	4 cut(s)	161, 863, 1226, 1335
BfmI	CTRYAG	3 cut(s)	124, 183, 1734
BfuI	GTATCC	1 cut(s)	201
BglII	AGATCT	1 cut(s)	286
BisI	GCNGC	3 cut(s)	58, 1448, 1792
BlsI	GCNGC	3 cut(s)	59, 1449, 1793
BmcAI	AGTACT	1 cut(s)	710
Bme1390I	CCNGG	4 cut(s)	69, 468, 598, 940
Bme18I	GGWCC	5 cut(s)	311, 380, 812, 1580, 1752
BmgT120I	GGNCC	5 cut(s)	311, 380, 812, 1580, 1752
BmiI	GGNNCC	6 cut(s)	313, 1241, 1358, 1392, 1532, 1753
BmrFI	CCNGG	4 cut(s)	69, 468, 598, 940
BmrI	ACTGGG	2 cut(s)	1186, 1496
BmsI	GCATC	1 cut(s)	591
BmuI	ACTGGG	2 cut(s)	1186, 1496
BpiI	GAAGAC	1 cut(s)	163
BplI	GAGNNNNNCTC	2 cut(s)	367, 399
BpmI	CTGGAG	1 cut(s)	1344
Bpu10I	CCTNAGC	1 cut(s)	203
Bpu14I	TTCGAA	2 cut(s)	1010, 1773
BpuEI	CTTGAG	2 cut(s)	394, 970
BpuMI	CCSGG	2 cut(s)	598, 940
BsaBI	GATNNNNATC	1 cut(s)	516
BsaJI	CCNNGG	1 cut(s)	694
BsaWI	WCCGGW	2 cut(s)	676, 1261
Bsc4I	CCNNNNNNNGG	3 cut(s)	473, 912, 1526
Bse1I	ACTGG	6 cut(s)	320, 346, 874, 1192, 1327, 1491
Bse3DI	GCAATG	2 cut(s)	843, 1064
Bse8I	GATNNNNATC	1 cut(s)	516
BseAI	TCCGGA	1 cut(s)	676
BseBI	CCWGG	2 cut(s)	69, 468
BseDI	CCNNGG	1 cut(s)	694
BseGI	GGATG	5 cut(s)	35, 606, 685, 893, 1726
BseJI	GATNNNNATC	1 cut(s)	516
BseLI	CCNNNNNNNGG	3 cut(s)	473, 912, 1526
BseMI	GCAATG	2 cut(s)	843, 1064
BseMII	CTCAG	2 cut(s)	596, 1516
BseNI	ACTGG	6 cut(s)	320, 346, 874, 1192, 1327, 1491
BseXI	GCAGC	2 cut(s)	44, 1459
BshFI	GGCC	4 cut(s)	67, 851, 957, 1519
BsiSI	CCGG	5 cut(s)	389, 597, 677, 940, 1262
BslFI	GGGAC	3 cut(s)	297, 334, 1765
BslI	CCNNNNNNNGG	3 cut(s)	473, 912, 1526
BsmAI	GTCTC	3 cut(s)	1292, 1613, 1638
BsmFI	GGGAC	3 cut(s)	297, 334, 1765
BsmI	GAATGC	1 cut(s)	576
BsnI	GGCC	4 cut(s)	67, 851, 957, 1519
Bsp119I	TTCGAA	2 cut(s)	1010, 1773
Bsp13I	TCCGGA	1 cut(s)	676
Bsp143I	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
BspACI	CCGC	2 cut(s)	1243, 1791
BspANI	GGCC	4 cut(s)	67, 851, 957, 1519
BspCNI	CTCAG	2 cut(s)	597, 1515
BspEI	TCCGGA	1 cut(s)	676
BspLI	GGNNCC	6 cut(s)	313, 1241, 1358, 1392, 1532, 1753
BspMAI	CTGCAG	1 cut(s)	1738
BspPI	GGATC	4 cut(s)	1115, 1563, 1723, 1790
BspT104I	TTCGAA	2 cut(s)	1010, 1773
BsrDI	GCAATG	2 cut(s)	843, 1064
BsrI	ACTGG	6 cut(s)	320, 346, 874, 1192, 1327, 1491
BssECI	CCNNGG	1 cut(s)	694
BssMI	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
BssT1I	CCWWGG	1 cut(s)	694
Bst2UI	CCWGG	2 cut(s)	69, 468
Bst4CI	ACNGT	3 cut(s)	708, 830, 1571
Bst6I	CTCTTC	4 cut(s)	52, 91, 390, 1295
BstBI	TTCGAA	2 cut(s)	1010, 1773
BstC8I	GCNNGC	3 cut(s)	1018, 1482, 1915
BstDEI	CTNAG	8 cut(s)	203, 283, 290, 544, 605, 1297, 1352, 1502
BstEII	GGTNACC	1 cut(s)	455
BstF5I	GGATG	5 cut(s)	35, 606, 685, 893, 1726
BstKTI	GATC	8 cut(s)	289, 520, 823, 862, 1123, 1558, 1731, 1798
BstMAI	GTCTC	3 cut(s)	1292, 1613, 1638
BstMBI	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
BstNI	CCWGG	2 cut(s)	69, 468
BstNSI	RCATGY	1 cut(s)	1216
BstPI	GGTNACC	1 cut(s)	455
BstSCI	CCNGG	4 cut(s)	67, 466, 596, 938
BstSFI	CTRYAG	3 cut(s)	124, 183, 1734
BstV1I	GCAGC	2 cut(s)	44, 1459
BstV2I	GAAGAC	1 cut(s)	163
BstX2I	RGATCY	3 cut(s)	286, 1555, 1728
BstXI	CCANNNNNNTGG	2 cut(s)	695, 881
BstYI	RGATCY	3 cut(s)	286, 1555, 1728
BsuI	GTATCC	1 cut(s)	201
BsuRI	GGCC	4 cut(s)	67, 851, 957, 1519
BtsCI	GGATG	5 cut(s)	35, 606, 685, 893, 1726
BtsI	GCAGTG	2 cut(s)	1829, 1896
BtsIMutI	CAGTG	6 cut(s)	742, 1199, 1484, 1510, 1829, 1896
Cac8I	GCNNGC	3 cut(s)	1018, 1482, 1915
Cfr13I	GGNCC	5 cut(s)	311, 380, 812, 1580, 1752
CsiI	ACCWGGT	1 cut(s)	466
Csp6I	GTAC	2 cut(s)	425, 709
CspCI	CAANNNNNGTGG	6 cut(s)	358, 393, 934, 969, 1650, 1685
CviAII	CATG	5 cut(s)	494, 781, 1090, 1213, 1547
CviQI	GTAC	2 cut(s)	425, 709
DdeI	CTNAG	8 cut(s)	203, 283, 290, 544, 605, 1297, 1352, 1502
DpnI	GATC	8 cut(s)	288, 519, 822, 861, 1122, 1557, 1730, 1797
DpnII	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
EaeI	YGGCCR	3 cut(s)	65, 955, 1517
Eam1104I	CTCTTC	4 cut(s)	52, 91, 390, 1295
EarI	CTCTTC	4 cut(s)	52, 91, 390, 1295
Eco130I	CCWWGG	1 cut(s)	694
Eco32I	GATATC	2 cut(s)	646, 1330
Eco47I	GGWCC	5 cut(s)	311, 380, 812, 1580, 1752
Eco91I	GGTNACC	1 cut(s)	455
EcoO109I	RGGNCCY	1 cut(s)	1752
EcoO65I	GGTNACC	1 cut(s)	455
EcoRII	CCWGG	2 cut(s)	67, 466
EcoRV	GATATC	2 cut(s)	646, 1330
EcoT14I	CCWWGG	1 cut(s)	694
ErhI	CCWWGG	1 cut(s)	694
FaeI	CATG	5 cut(s)	497, 784, 1093, 1216, 1550
FalI	AAGNNNNNCTT	2 cut(s)	1098, 1130
FaqI	GGGAC	3 cut(s)	297, 334, 1765
FatI	CATG	5 cut(s)	493, 780, 1089, 1212, 1546
Fnu4HI	GCNGC	3 cut(s)	58, 1448, 1792
FokI	GGATG	5 cut(s)	42, 613, 692, 880, 1733
Fsp4HI	GCNGC	3 cut(s)	58, 1448, 1792
FspBI	CTAG	4 cut(s)	161, 863, 1226, 1335
GluI	GCNGC	3 cut(s)	58, 1448, 1792
GsuI	CTGGAG	1 cut(s)	1344
HaeIII	GGCC	4 cut(s)	67, 851, 957, 1519
HapII	CCGG	5 cut(s)	389, 597, 677, 940, 1262
Hin1II	CATG	5 cut(s)	497, 784, 1093, 1216, 1550
HindIII	AAGCTT	4 cut(s)	541, 590, 1339, 1768
HinfI	GANTC	5 cut(s)	110, 179, 1066, 1081, 1621
HpaII	CCGG	5 cut(s)	389, 597, 677, 940, 1262
HphI	GGTGA	3 cut(s)	407, 467, 1078
Hpy166II	GTNNAC	2 cut(s)	425, 442
Hpy188III	TCNNGA	9 cut(s)	116, 666, 677, 857, 1388, 1417, 1578, 1625, 1854
Hpy8I	GTNNAC	2 cut(s)	425, 442
HpyAV	CCTTC	9 cut(s)	348, 428, 1052, 1141, 1244, 1404, 1553, 1765, 1769
HpyCH4III	ACNGT	3 cut(s)	708, 830, 1571
HpyCH4V	TGCA	8 cut(s)	60, 81, 493, 1139, 1163, 1219, 1447, 1736
HpyF3I	CTNAG	8 cut(s)	203, 283, 290, 544, 605, 1297, 1352, 1502
Hsp92II	CATG	5 cut(s)	497, 784, 1093, 1216, 1550
Kpn2I	TCCGGA	1 cut(s)	676
Kzo9I	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
LmnI	GCTCC	3 cut(s)	142, 1356, 1807
Lsp1109I	GCAGC	2 cut(s)	44, 1459
LweI	GCATC	1 cut(s)	591
MabI	ACCWGGT	1 cut(s)	466
MaeI	CTAG	4 cut(s)	161, 863, 1226, 1335
MaeIII	GTNAC	4 cut(s)	455, 617, 1202, 1924
MalI	GATC	8 cut(s)	288, 519, 822, 861, 1122, 1557, 1730, 1797
MboI	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
MfeI	CAATTG	3 cut(s)	816, 1220, 1715
MflI	RGATCY	3 cut(s)	286, 1555, 1728
MlsI	TGGCCA	3 cut(s)	67, 957, 1519
MluNI	TGGCCA	3 cut(s)	67, 957, 1519
MlyI	GAGTC	1 cut(s)	1615
MmeI	TCCRAC	2 cut(s)	120, 1148
Mox20I	TGGCCA	3 cut(s)	67, 957, 1519
MroI	TCCGGA	1 cut(s)	676
MroXI	GAANNNNTTC	1 cut(s)	799
MscI	TGGCCA	3 cut(s)	67, 957, 1519
MseI	TTAA	7 cut(s)	135, 213, 627, 786, 975, 1343, 1674
MslI	CAYNNNNRTG	1 cut(s)	420
Msp20I	TGGCCA	3 cut(s)	67, 957, 1519
MspI	CCGG	5 cut(s)	389, 597, 677, 940, 1262
MspR9I	CCNGG	4 cut(s)	69, 468, 598, 940
MunI	CAATTG	3 cut(s)	816, 1220, 1715
Mva1269I	GAATGC	1 cut(s)	576
MvaI	CCWGG	2 cut(s)	69, 468
NciI	CCSGG	2 cut(s)	598, 940
NdeII	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
NlaIII	CATG	5 cut(s)	497, 784, 1093, 1216, 1550
NlaIV	GGNNCC	6 cut(s)	313, 1241, 1358, 1392, 1532, 1753
NmuCI	GTSAC	1 cut(s)	455
NspI	RCATGY	1 cut(s)	1216
NspV	TTCGAA	2 cut(s)	1010, 1773
OliI	CACNNNNGTG	1 cut(s)	420
PciI	ACATGT	1 cut(s)	1212
PctI	GAATGC	1 cut(s)	576
PdmI	GAANNNNTTC	1 cut(s)	799
PfeI	GAWTC	4 cut(s)	110, 179, 1066, 1081
PflMI	CCANNNNNTGG	2 cut(s)	473, 1526
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	3 cut(s)	59, 1449, 1793
PleI	GAGTC	1 cut(s)	1615
PpsI	GAGTC	1 cut(s)	1615
PpuMI	RGGWCCY	1 cut(s)	1752
PscI	ACATGT	1 cut(s)	1212
Psp5II	RGGWCCY	1 cut(s)	1752
Psp6I	CCWGG	2 cut(s)	67, 466
PspEI	GGTNACC	1 cut(s)	455
PspGI	CCWGG	2 cut(s)	67, 466
PspN4I	GGNNCC	6 cut(s)	313, 1241, 1358, 1392, 1532, 1753
PspPI	GGNCC	5 cut(s)	311, 380, 812, 1580, 1752
PspPPI	RGGWCCY	1 cut(s)	1752
PstI	CTGCAG	1 cut(s)	1738
PsuI	RGATCY	3 cut(s)	286, 1555, 1728
RsaI	GTAC	2 cut(s)	426, 710
RsaNI	GTAC	2 cut(s)	425, 709
RseI	CAYNNNNRTG	1 cut(s)	420
SaqAI	TTAA	7 cut(s)	135, 213, 627, 786, 975, 1343, 1674
SatI	GCNGC	3 cut(s)	58, 1448, 1792
Sau3AI	GATC	8 cut(s)	286, 517, 820, 859, 1120, 1555, 1728, 1795
Sau96I	GGNCC	5 cut(s)	311, 380, 812, 1580, 1752
SbfI	CCTGCAGG	1 cut(s)	1738
ScaI	AGTACT	1 cut(s)	710
SchI	GAGTC	1 cut(s)	1615
ScrFI	CCNGG	4 cut(s)	69, 468, 598, 940
SdaI	CCTGCAGG	1 cut(s)	1738
SexAI	ACCWGGT	1 cut(s)	466
SfaNI	GCATC	1 cut(s)	591
SfcI	CTRYAG	3 cut(s)	124, 183, 1734
SfuI	TTCGAA	2 cut(s)	1010, 1773
SinI	GGWCC	5 cut(s)	311, 380, 812, 1580, 1752
SmiMI	CAYNNNNRTG	1 cut(s)	420
SmlI	CTYRAG	2 cut(s)	373, 949
SmoI	CTYRAG	2 cut(s)	373, 949
SpeI	ACTAGT	1 cut(s)	160
Sse8387I	CCTGCAGG	1 cut(s)	1738
SsiI	CCGC	2 cut(s)	1243, 1791
SspI	AATATT	1 cut(s)	1375
SspMI	CTAG	4 cut(s)	161, 863, 1226, 1335
StyD4I	CCNGG	4 cut(s)	67, 466, 596, 938
StyI	CCWWGG	1 cut(s)	694
TaaI	ACNGT	3 cut(s)	708, 830, 1571
TaqI	TCGA	5 cut(s)	1010, 1463, 1471, 1604, 1773
TatI	WGTACW	2 cut(s)	424, 708
TauI	GCSGC	1 cut(s)	1794
TfiI	GAWTC	4 cut(s)	110, 179, 1066, 1081
Tru1I	TTAA	7 cut(s)	135, 213, 627, 786, 975, 1343, 1674
Tru9I	TTAA	7 cut(s)	135, 213, 627, 786, 975, 1343, 1674
TscAI	CASTG	6 cut(s)	742, 1199, 1491, 1510, 1836, 1896
TseFI	GTSAC	1 cut(s)	455
TseI	GCWGC	2 cut(s)	57, 1447
Tsp45I	GTSAC	1 cut(s)	455
TspDTI	ATGAA	8 cut(s)	78, 251, 626, 792, 974, 1106, 1119, 1535
TspRI	CASTG	6 cut(s)	742, 1199, 1491, 1510, 1836, 1896
Van91I	CCANNNNNTGG	2 cut(s)	473, 1526
VpaK11BI	GGWCC	5 cut(s)	311, 380, 812, 1580, 1752
XapI	RAATTY	7 cut(s)	271, 763, 979, 1047, 1403, 1562, 1762
XceI	RCATGY	1 cut(s)	1216
XmnI	GAANNNNTTC	1 cut(s)	799
XspI	CTAG	4 cut(s)	161, 863, 1226, 1335
ZrmI	AGTACT	1 cut(s)	710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.