Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Forward (+)

821998 .. 824079

Gene Structure 2082 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005687

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGAGTGTTCAAGATTTCTGGGTGGTTATCTTTGTCATTGGGTTTTGCTTCCAGCTTCCAGTTTTGAGCTCTCAGAACCTGACGTGTCATCCAAATGATTTTTTTGCATTGGAGGATTTCTTGAATGGTCTGCAAAGTGCCATTGGTGGGTGGGGCAAGAATTTCTCTGCTGATTGCTGTAAATGGGCAGGTATTACTTGCAACTCTTCATTCTATCTTGGATTGGATGATTCTGTTGATACTTATAGAGTGGTTAAGTTGGAGCTTCCAAGTAAAAGACTAGTTGGCAAACTCTCAGAATCTCTGGGGAATTTGGAACAGCTTAGAACCCTCAATCTCTCTCAGAATTTACTCAAATACTCGCTTCCTGTTTCGCTATTCCAATTGCCAAATTTAAAGGTCTTGGATTTGAGCTCTAATGCCTTCTCTGGGTCCATTCCAGTTGATATTAATTTACCTTCAGTTCAGTACCTAGACATGTCTCAAAACTTCTTGAATGGTTCCTTACCAAGCAGCATGTGTCGCAATTCTACTCAGCTTCAGGTACTGAAATTGCGTGTGAACTACTTTTCCGGTGACCTTGCACCAGGTCTTGCCAATTGTAGTTCCTTGGAGGCAATCCATCTCAGCACGAACAATCTCTCCGGTGGTATACCTGAAGGTATATATCTTCTGCAACAGCTAACCCAGTTGACCATTCATGATAACAAGCTTTCTGGGCCACTGAGCAAAAAAGTTGGTAACCTCATTAACCTTGTTTGTTTGGATATCTCGACTAATCGGTTTTCAGGAACTATCCCAGATGTTTTCCATGGCCTTGGAAGATTACAGTATTTTGTTGCTCATTCCAATAACTTCAGTGGTCAGATACCCCCTTCCCTGTCAAGTTCCCGAAGTATCCATCTGCTTAATGTGAGAAACAATTCATTGGCAGGTCCAATTGATTTAAATTGTTCAGCAATGAAAAGTTTGGTCTCTCTTGATTTAAGTTCAAACCAGTTTGACGGGGTTATTCCATCCAATCCTCCCTCTTGTCGGCATTTGAATGACATAAATCTTGTCTTGAACCACTTGAGGGGACAAATACCTGACAGCTTCAAGGATTTTCATACTCTCAATTGCCTCTCACTTTCAAACGCCAGCTATTCTAATCTATCATCTGCCCTTCATATTTTACAGCAGTGTCAGAATCTAACTACTTTGATTCTCACCCTGAACTTCTATGATGAAGAATTGCCTGCTGATCCAACCATTCATTTTGCAAAGTTGAAGGTTTTCATTCTTGCAAACAGTAGGCTCAAAGGTTCAATACCCCAGTGGTTGAGTAAGAGCAGCAGATTGCAGTTATTGGATATATCGTGGAACCGCTTATTGGAAGGTACAATTCCAGCTTGGTTTGGCAATTTTACTTATCTCTTCTACTTGGACATATCAAACAATTCTTTTAATGGCTATATCCCGAGAAGCTTAACTGGACTACGGAGCCTCGTTACTGGGAACATCTCATTTAGGGAACCATCCCCTGATTTTCCTCTTTTCATGAAAAAGAATGTAAGTGCAAGGGAATTGCAGTACAATAAAGTTTGGAGCTTTCCACCGACACTGGATATCAGCAACAATAATCTTAGAGGACCAATCTGGCCAGCCTTTGGAAACCTGAAAGCGCTTCATGTTTTGAATCTGGGATTCAACAGTCTATCAGGACCAATTCCAAATTATTTATCTGAGCTGACCAACTTGGAGACACTGGATTTGTCTCATAACAAGCTTTCAGGGGAAATACCGCCTTCATTCGTTCGTCTCAGCTTTTTGTCCAAGTTTAGTGTTGCATACAATCAATTAGATGGAGTGATCCCTACAGGAGGTCAGTTTGGGACCTTCCCAAATTCAAGCTTCGAAGGGAATAATCTCTGCGGCGGTTATACTTCCCCTTGTCTGTCTTTTTCAAAACCACTACCACAGCCACACAGCAAATCAAGAGGAGAATACAGCAGAATTGTCATTGGAATAGCTGTGGGATTTGTATTTGGAGTAGCTTGCTTTATTGTAACAGATAGATATGTATGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

694

Amino Acids

76.62

Weight (kDa)

8.1

Isoelectric Point (pI)

34.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 68	1.8e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	85 - 141	6.4e-07	Leucine rich repeat
LRR_8	PF13855	534 - 590	2.3e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	179, 923
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AccI	GTMKAC	1 cut(s)	652
AciI	CCGC	4 cut(s)	1366, 1784, 1914, 1917
AclWI	GGATC	2 cut(s)	1238, 1846
AcoI	YGGCCR	1 cut(s)	1640
AcsI	RAATTY	5 cut(s)	160, 310, 346, 391, 1885
AcuI	CTGAAG	4 cut(s)	444, 524, 678, 841
AfaI	GTAC	4 cut(s)	470, 546, 1381, 1574
AfeI	AGCGCT	1 cut(s)	1665
AfiI	CCNNNNNNNGG	7 cut(s)	147, 429, 1035, 1075, 1372, 1649, 1862
AflIII	ACRYGT	2 cut(s)	83, 477
AhlI	ACTAGT	1 cut(s)	280
AjiI	CACGTC	1 cut(s)	84
AjnI	CCWGG	1 cut(s)	586
AjuI	GAANNNNNNNTTGG	2 cut(s)	1355, 1387
AloI	GAACNNNNNNTCC	4 cut(s)	554, 586, 626, 658
Alw21I	GWGCWC	2 cut(s)	71, 416
Alw26I	GTCTC	5 cut(s)	486, 979, 1736, 1761, 1805
AlwI	GGATC	2 cut(s)	1238, 1846
AlwNI	CAGNNNCTG	2 cut(s)	79, 547
Ama87I	CYCGRG	1 cut(s)	1459
Aor51HI	AGCGCT	1 cut(s)	1665
AoxI	GGCC	3 cut(s)	719, 814, 1640
ApeKI	GCWGC	2 cut(s)	513, 1332
ApoI	RAATTY	5 cut(s)	160, 310, 346, 391, 1885
ArsI	GACNNNNNNTTYG	2 cut(s)	1735, 1767
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	2 cut(s)	922, 1274
AspLEI	GCGC	1 cut(s)	1666
AspS9I	GGNCC	6 cut(s)	432, 719, 935, 1631, 1703, 1875
AsuHPI	GGTGA	2 cut(s)	587, 1201
AsuII	TTCGAA	1 cut(s)	1896
AvaI	CYCGRG	1 cut(s)	1459
AvaII	GGWCC	5 cut(s)	432, 935, 1631, 1703, 1875
BalI	TGGCCA	1 cut(s)	1642
BanII	GRGCYC	2 cut(s)	71, 416
Bbv12I	GWGCWC	2 cut(s)	71, 416
BbvI	GCAGC	2 cut(s)	525, 1344
BccI	CCATC	5 cut(s)	630, 909, 1024, 1525, 1838
BciT130I	CCWGG	1 cut(s)	588
BciVI	GTATCC	1 cut(s)	908
BcoDI	GTCTC	5 cut(s)	486, 979, 1736, 1761, 1805
BcuI	ACTAGT	1 cut(s)	280
BfaI	CTAG	2 cut(s)	281, 473
BfmI	CTRYAG	1 cut(s)	1857
BfoI	RGCGCY	1 cut(s)	1667
BfuAI	ACCTGC	2 cut(s)	179, 923
BfuI	GTATCC	1 cut(s)	908
BisI	GCNGC	3 cut(s)	514, 1333, 1915
BlsI	GCNGC	3 cut(s)	515, 1334, 1916
Bme1390I	CCNGG	1 cut(s)	588
Bme18I	GGWCC	5 cut(s)	432, 935, 1631, 1703, 1875
BmeT110I	CYCGRG	1 cut(s)	1459
BmgBI	CACGTC	1 cut(s)	84
BmgT120I	GGNCC	6 cut(s)	432, 719, 935, 1631, 1703, 1875
BmiI	GGNNCC	6 cut(s)	433, 502, 1364, 1484, 1515, 1876
BmrFI	CCNGG	1 cut(s)	588
BmrI	ACTGGG	3 cut(s)	682, 1309, 1503
BmuI	ACTGGG	3 cut(s)	682, 1309, 1503
Bpu14I	TTCGAA	1 cut(s)	1896
BpuEI	CTTGAG	1 cut(s)	1093
BsaI	GGTCTC	1 cut(s)	979
BsaJI	CCNNGG	3 cut(s)	609, 811, 817
BsaWI	WCCGGW	2 cut(s)	572, 644
BsaXI	ACNNNNNCTCC	2 cut(s)	626, 656
Bsc4I	CCNNNNNNNGG	7 cut(s)	147, 429, 1035, 1075, 1372, 1649, 1862
Bse1I	ACTGG	9 cut(s)	59, 440, 688, 997, 1315, 1477, 1498, 1608, 1752
Bse3DI	GCAATG	1 cut(s)	966
BseBI	CCWGG	1 cut(s)	588
BseDI	CCNNGG	3 cut(s)	609, 811, 817
BseGI	GGATG	4 cut(s)	88, 232, 1016, 1517
BseLI	CCNNNNNNNGG	7 cut(s)	147, 429, 1035, 1075, 1372, 1649, 1862
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	8 cut(s)	86, 309, 356, 548, 640, 716, 1716, 1816
BseNI	ACTGG	9 cut(s)	59, 440, 688, 997, 1315, 1477, 1498, 1608, 1752
BseRI	GAGGAG	1 cut(s)	1995
BseXI	GCAGC	2 cut(s)	525, 1344
BshFI	GGCC	3 cut(s)	721, 816, 1642
BsiHKAI	GWGCWC	2 cut(s)	71, 416
BsiHKCI	CYCGRG	1 cut(s)	1459
BsiSI	CCGG	2 cut(s)	573, 645
BslFI	GGGAC	2 cut(s)	1092, 1888
BslI	CCNNNNNNNGG	7 cut(s)	147, 429, 1035, 1075, 1372, 1649, 1862
BsmAI	GTCTC	5 cut(s)	486, 979, 1736, 1761, 1805
BsmBI	CGTCTC	1 cut(s)	1805
BsmFI	GGGAC	2 cut(s)	1092, 1888
BsnI	GGCC	3 cut(s)	721, 816, 1642
Bso31I	GGTCTC	1 cut(s)	979
BsoBI	CYCGRG	1 cut(s)	1459
Bsp119I	TTCGAA	1 cut(s)	1896
Bsp1286I	GDGCHC	2 cut(s)	71, 416
Bsp143I	GATC	2 cut(s)	1243, 1851
Bsp19I	CCATGG	1 cut(s)	811
BspACI	CCGC	4 cut(s)	1366, 1784, 1914, 1917
BspANI	GGCC	3 cut(s)	721, 816, 1642
BspCNI	CTCAG	8 cut(s)	85, 308, 355, 547, 639, 717, 1717, 1815
BspHI	TCATGA	2 cut(s)	700, 1539
BspLI	GGNNCC	6 cut(s)	433, 502, 1364, 1484, 1515, 1876
BspMI	ACCTGC	2 cut(s)	179, 923
BspPI	GGATC	2 cut(s)	1238, 1846
BspT104I	TTCGAA	1 cut(s)	1896
BspTNI	GGTCTC	1 cut(s)	979
BsrDI	GCAATG	1 cut(s)	966
BsrI	ACTGG	9 cut(s)	59, 440, 688, 997, 1315, 1477, 1498, 1608, 1752
BssECI	CCNNGG	3 cut(s)	609, 811, 817
BssMI	GATC	2 cut(s)	1243, 1851
BssNAI	GTATAC	1 cut(s)	653
BssT1I	CCWWGG	3 cut(s)	609, 811, 817
Bst1107I	GTATAC	1 cut(s)	653
Bst2UI	CCWGG	1 cut(s)	588
Bst4CI	ACNGT	3 cut(s)	831, 1292, 1694
Bst6I	CTCTTC	2 cut(s)	211, 1421
BstBI	TTCGAA	1 cut(s)	1896
BstC8I	GCNNGC	4 cut(s)	1141, 1239, 1644, 2038
BstDSI	CCRYGG	1 cut(s)	811
BstEII	GGTNACC	2 cut(s)	575, 740
BstENI	CCTNNNNNAGG	1 cut(s)	1860
BstF5I	GGATG	4 cut(s)	88, 232, 1016, 1517
BstH2I	RGCGCY	1 cut(s)	1667
BstHHI	GCGC	1 cut(s)	1666
BstKTI	GATC	2 cut(s)	1246, 1854
BstMAI	GTCTC	5 cut(s)	486, 979, 1736, 1761, 1805
BstMBI	GATC	2 cut(s)	1243, 1851
BstMWI	GCNNNNNNNGC	2 cut(s)	522, 718
BstNI	CCWGG	1 cut(s)	588
BstNSI	RCATGY	2 cut(s)	481, 520
BstPI	GGTNACC	2 cut(s)	575, 740
BstSCI	CCNGG	1 cut(s)	586
BstSFI	CTRYAG	1 cut(s)	1857
BstV1I	GCAGC	2 cut(s)	525, 1344
BstXI	CCANNNNNNTGG	1 cut(s)	818
BstZ17I	GTATAC	1 cut(s)	653
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	3 cut(s)	721, 816, 1642
BtgI	CCRYGG	1 cut(s)	811
BtrI	CACGTC	1 cut(s)	84
BtsCI	GGATG	4 cut(s)	88, 232, 1016, 1517
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	6 cut(s)	722, 865, 1187, 1322, 1601, 1745
BveI	ACCTGC	2 cut(s)	179, 923
Cac8I	GCNNGC	4 cut(s)	1141, 1239, 1644, 2038
CaiI	CAGNNNCTG	2 cut(s)	79, 547
CciI	TCATGA	2 cut(s)	700, 1539
CfoI	GCGC	1 cut(s)	1666
Cfr13I	GGNCC	6 cut(s)	432, 719, 935, 1631, 1703, 1875
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	4 cut(s)	469, 545, 1380, 1573
CviAII	CATG	6 cut(s)	478, 517, 701, 812, 1540, 1670
CviQI	GTAC	4 cut(s)	469, 545, 1380, 1573
DpnI	GATC	2 cut(s)	1245, 1853
DpnII	GATC	2 cut(s)	1243, 1851
DraI	TTTAAA	2 cut(s)	396, 948
EaeI	YGGCCR	1 cut(s)	1640
Eam1104I	CTCTTC	2 cut(s)	211, 1421
EarI	CTCTTC	2 cut(s)	211, 1421
Ecl136II	GAGCTC	2 cut(s)	69, 414
Eco130I	CCWWGG	3 cut(s)	609, 811, 817
Eco24I	GRGCYC	2 cut(s)	71, 416
Eco31I	GGTCTC	1 cut(s)	979
Eco32I	GATATC	2 cut(s)	769, 1609
Eco47I	GGWCC	5 cut(s)	432, 935, 1631, 1703, 1875
Eco47III	AGCGCT	1 cut(s)	1665
Eco53kI	GAGCTC	2 cut(s)	69, 414
Eco57I	CTGAAG	4 cut(s)	444, 524, 678, 841
Eco88I	CYCGRG	1 cut(s)	1459
Eco91I	GGTNACC	2 cut(s)	575, 740
EcoICRI	GAGCTC	2 cut(s)	69, 414
EcoNI	CCTNNNNNAGG	1 cut(s)	1860
EcoO109I	RGGNCCY	1 cut(s)	1875
EcoO65I	GGTNACC	2 cut(s)	575, 740
EcoRII	CCWGG	1 cut(s)	586
EcoRV	GATATC	2 cut(s)	769, 1609
EcoT14I	CCWWGG	3 cut(s)	609, 811, 817
EcoT38I	GRGCYC	2 cut(s)	71, 416
ErhI	CCWWGG	3 cut(s)	609, 811, 817
Esp3I	CGTCTC	1 cut(s)	1805
FaeI	CATG	6 cut(s)	481, 520, 704, 815, 1543, 1673
FaqI	GGGAC	2 cut(s)	1092, 1888
FatI	CATG	6 cut(s)	477, 516, 700, 811, 1539, 1669
FblI	GTMKAC	1 cut(s)	652
Fnu4HI	GCNGC	3 cut(s)	514, 1333, 1915
FokI	GGATG	4 cut(s)	75, 239, 1003, 1504
FriOI	GRGCYC	2 cut(s)	71, 416
Fsp4HI	GCNGC	3 cut(s)	514, 1333, 1915
FspBI	CTAG	2 cut(s)	281, 473
GlaI	GCGC	1 cut(s)	1665
GluI	GCNGC	3 cut(s)	514, 1333, 1915
HaeII	RGCGCY	1 cut(s)	1667
HaeIII	GGCC	3 cut(s)	721, 816, 1642
HapII	CCGG	2 cut(s)	573, 645
HhaI	GCGC	1 cut(s)	1666
Hin1II	CATG	6 cut(s)	481, 520, 704, 815, 1543, 1673
Hin6I	GCGC	1 cut(s)	1664
HinP1I	GCGC	1 cut(s)	1664
HincII	GTYRAC	1 cut(s)	693
HindII	GTYRAC	1 cut(s)	693
HindIII	AAGCTT	4 cut(s)	710, 1465, 1766, 1891
HinfI	GANTC	6 cut(s)	230, 299, 1189, 1204, 1678, 1686
HpaII	CCGG	2 cut(s)	573, 645
HphI	GGTGA	2 cut(s)	587, 1201
Hpy166II	GTNNAC	3 cut(s)	562, 653, 693
Hpy188I	TCNGA	6 cut(s)	75, 298, 345, 867, 1188, 1726
Hpy8I	GTNNAC	3 cut(s)	562, 653, 693
HpyCH4III	ACNGT	3 cut(s)	831, 1292, 1694
HpyCH4IV	ACGT	1 cut(s)	83
HpyF10VI	GCNNNNNNNGC	2 cut(s)	522, 718
HpySE526I	ACGT	1 cut(s)	83
Hsp92II	CATG	6 cut(s)	481, 520, 704, 815, 1543, 1673
HspAI	GCGC	1 cut(s)	1664
Kzo9I	GATC	2 cut(s)	1243, 1851
LmnI	GCTCC	3 cut(s)	262, 1482, 1587
Lsp1109I	GCAGC	2 cut(s)	525, 1344
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	2 cut(s)	281, 473
MaeII	ACGT	1 cut(s)	83
MaeIII	GTNAC	4 cut(s)	575, 740, 1489, 2047
MalI	GATC	2 cut(s)	1245, 1853
MboI	GATC	2 cut(s)	1243, 1851
MboII	GAAGA	5 cut(s)	198, 662, 834, 1241, 1408
MfeI	CAATTG	4 cut(s)	383, 598, 939, 1117
MhlI	GDGCHC	2 cut(s)	71, 416
MlsI	TGGCCA	1 cut(s)	1642
MluNI	TGGCCA	1 cut(s)	1642
MmeI	TCCRAC	2 cut(s)	240, 1271
Mox20I	TGGCCA	1 cut(s)	1642
MroXI	GAANNNNTTC	2 cut(s)	922, 1274
MscI	TGGCCA	1 cut(s)	1642
MseI	TTAA	9 cut(s)	255, 395, 450, 750, 909, 947, 986, 1446, 1469
MslI	CAYNNNNRTG	2 cut(s)	93, 1044
Msp20I	TGGCCA	1 cut(s)	1642
MspI	CCGG	2 cut(s)	573, 645
MspR9I	CCNGG	1 cut(s)	588
MunI	CAATTG	4 cut(s)	383, 598, 939, 1117
MvaI	CCWGG	1 cut(s)	588
MwoI	GCNNNNNNNGC	2 cut(s)	522, 718
NcoI	CCATGG	1 cut(s)	811
NdeII	GATC	2 cut(s)	1243, 1851
NlaIII	CATG	6 cut(s)	481, 520, 704, 815, 1543, 1673
NlaIV	GGNNCC	6 cut(s)	433, 502, 1364, 1484, 1515, 1876
NmuCI	GTSAC	1 cut(s)	575
NspI	RCATGY	2 cut(s)	481, 520
NspV	TTCGAA	1 cut(s)	1896
PagI	TCATGA	2 cut(s)	700, 1539
PciI	ACATGT	1 cut(s)	477
PdmI	GAANNNNTTC	2 cut(s)	922, 1274
PfeI	GAWTC	6 cut(s)	230, 299, 1189, 1204, 1678, 1686
PflMI	CCANNNNNTGG	1 cut(s)	1649
PkrI	GCNGC	3 cut(s)	515, 1334, 1916
PpuMI	RGGWCCY	1 cut(s)	1875
PscI	ACATGT	1 cut(s)	477
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	2 cut(s)	71, 416
Psp5II	RGGWCCY	1 cut(s)	1875
Psp6I	CCWGG	1 cut(s)	586
PspEI	GGTNACC	2 cut(s)	575, 740
PspGI	CCWGG	1 cut(s)	586
PspN4I	GGNNCC	6 cut(s)	433, 502, 1364, 1484, 1515, 1876
PspPI	GGNCC	6 cut(s)	432, 719, 935, 1631, 1703, 1875
PspPPI	RGGWCCY	1 cut(s)	1875
PstNI	CAGNNNCTG	2 cut(s)	79, 547
RsaI	GTAC	4 cut(s)	470, 546, 1381, 1574
RsaNI	GTAC	4 cut(s)	469, 545, 1380, 1573
RseI	CAYNNNNRTG	2 cut(s)	93, 1044
SacI	GAGCTC	2 cut(s)	71, 416
SaqAI	TTAA	9 cut(s)	255, 395, 450, 750, 909, 947, 986, 1446, 1469
SatI	GCNGC	3 cut(s)	514, 1333, 1915
Sau3AI	GATC	2 cut(s)	1243, 1851
Sau96I	GGNCC	6 cut(s)	432, 719, 935, 1631, 1703, 1875
ScrFI	CCNGG	1 cut(s)	588
SduI	GDGCHC	2 cut(s)	71, 416
SexAI	ACCWGGT	1 cut(s)	586
SfcI	CTRYAG	1 cut(s)	1857
SfuI	TTCGAA	1 cut(s)	1896
SinI	GGWCC	5 cut(s)	432, 935, 1631, 1703, 1875
SmiI	ATTTAAAT	1 cut(s)	948
SmiMI	CAYNNNNRTG	2 cut(s)	93, 1044
SmlI	CTYRAG	1 cut(s)	1072
SmoI	CTYRAG	1 cut(s)	1072
SpeI	ACTAGT	1 cut(s)	280
SsiI	CCGC	4 cut(s)	1366, 1784, 1914, 1917
SspMI	CTAG	2 cut(s)	281, 473
SstI	GAGCTC	2 cut(s)	71, 416
StyD4I	CCNGG	1 cut(s)	586
StyI	CCWWGG	3 cut(s)	609, 811, 817
SwaI	ATTTAAAT	1 cut(s)	948
TaaI	ACNGT	3 cut(s)	831, 1292, 1694
TaiI	ACGT	1 cut(s)	86
TaqI	TCGA	2 cut(s)	773, 1896
TatI	WGTACW	1 cut(s)	1572
TauI	GCSGC	1 cut(s)	1917
TfiI	GAWTC	6 cut(s)	230, 299, 1189, 1204, 1678, 1686
Tru1I	TTAA	9 cut(s)	255, 395, 450, 750, 909, 947, 986, 1446, 1469
Tru9I	TTAA	9 cut(s)	255, 395, 450, 750, 909, 947, 986, 1446, 1469
TscAI	CASTG	6 cut(s)	729, 865, 1187, 1322, 1608, 1752
TseFI	GTSAC	1 cut(s)	575
TseI	GCWGC	2 cut(s)	513, 1332
Tsp45I	GTSAC	1 cut(s)	575
TspGWI	ACGGA	1 cut(s)	1495
TspRI	CASTG	6 cut(s)	729, 865, 1187, 1322, 1608, 1752
Van91I	CCANNNNNTGG	1 cut(s)	1649
VpaK11BI	GGWCC	5 cut(s)	432, 935, 1631, 1703, 1875
VspI	ATTAAT	1 cut(s)	450
XagI	CCTNNNNNAGG	1 cut(s)	1860
XapI	RAATTY	5 cut(s)	160, 310, 346, 391, 1885
XceI	RCATGY	2 cut(s)	481, 520
XmiI	GTMKAC	1 cut(s)	652
XmnI	GAANNNNTTC	2 cut(s)	922, 1274
XspI	CTAG	2 cut(s)	281, 473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.