Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

48426743 .. 48428818

Gene Structure 2076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG239400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGGGGTTCAAGAAATCTTTGTGGTCATCCTTGTTACTGGATTTTTCTTTCAAGCTCAAGTTTCGAGCTTTCAAAACCTGACGTGCAATCCAAATGACTGTCAAGCATTGCAAGATTTCATGACAGGTTTATCTCCTGTTATTGATGGATGGGGAAATGATTTCTCTTCTGATTGCTGCAAATGGCCAGGTATCACTTGCAACTCTTCATCTTCTCTTGGACTGAATGATTCTCTTGATAGCTACAGAGTGGTTAAGTTGGAGCTTCCAAGTAGAAGACTAGTTGGCAACATTTCTGAATCTATAGGTAATTTGGGACAGCTTAGGATACTTAACCTGTCAGACAATATCTTCAATGACACACTTCCAATCTCATTGTTTCATCTGCCAAATTTAGACCTCTTAGATCTAAGCTCTAATTTTATTTTTGGTCCCATTCCAGTTGTTTTTTATTTACCTTCAATCCAGTCCCTTGACATTTCTGATAACAACTTGAATGGTCCTCTTCCGACAAGTATCTGTGTCAATTCACATCACCTTCGTGTACTAAACTTGGCTGTGAACTACTTTTCTGGTGACCTCCCACCAGGTCTTGGAAATTGTAGTTCCTTGCATGACCTCCATCTCTACGATAATGATCTCACAGGTGGAATATCTGAAAGCTTAGTTCGGCTACAAAATCTAACCCATTTGAGCATTCAAAGTAACAAGCTTTCCGGGATGCTGAGTGAAGTTAGTAACCTCATTAACCTTGTTCATTTGGATATCTCCATTAATTTGTTTTCAGGAACTATTCCGGATGTTTTCCACAGCCTTGGAAGATTACAGTACTTTGTTGCTCATTCAAATAATTTCAGTGGTCAGATACCCCTTTCCTTGTCAAATTCCCCAACTATCTCCATGCTTAATGTGAGAAACAATTCATTGTCAGGTCCAATTGATCTAAACTGTTCAGCAATGACAAGTTTGGCCTCTCTTGATCTAGGTTCAAACCAGTTTGATGGGGTTATTCCATCCAATCTTCCCTCTTGTCGGCATTTGAATAGTATAAATCTTGCTCGGAACAACTTGAGTGGCCAAATACCTGAAACCTTTAAGAATTTTCATACTCTCCATTGCCTCTCACTTTCGAACGCCAGCCATTCTAATATATCATCTGCCCTTCAAATTTTACAGCAGTGTCAGAATCTAACTACTTTGATTCTCACCATGAACTTCTATGATGAAGAATTGCCTGTTGATCCAACCATTCAGTTTGCAAAGTTGAAGGTTCTCATTATTGCAAATTGTAGGCTCACAGGTTCAATGCCCCAGTGGTTGAGTAACAGCAACATGTTGCAGTTGTTAGATTTATCTTGGAACCGCTTTGAAGGAACAATTCCGGCCTGGTTTGGTGATTTCAGTAGTCTCTTCTACTTAGACATATCAAACAATTCTCTTACTGGAGATATCCCTAGAAGCTTAACCGAACTAAGGAGCCTCATTTATTGGAATATTTGCTCGGTTCAGGAACCTTCCCCTGAATTTCCTCTTTTCCAGAAAAAGAATGCAAGTGAAAGGGGATTGCAGCACAATAAAGTTTCGAGCTTTCAACCTACGCTGGCACTTGACAACAATAATCTCAATGGAGAAATCTGGCCAGAGTTTGGGAACCTGAAATCCCTTCATGTATTGGATCTGAAATTCAACAGTCTGTCAGGACCAATTCCGAGTAGTTTATCTTCGATGACCAATTTAGAGACTCTGGATTTGTCTCATAACAAACTTTCAGGGGCAATACCACCCTCGTTGGTTAATCTCTGCTCATTGTCCAAGTTTTCTGTTGCATACAATCAATTGGATGGAGAGATCCCTGCAGGACATCAGTTTGGGACCTTCCTAAATTCAAGCTTCGAAGGGAATAATCTTTGCGGCGATCCTGCTCCCCCTTGTCTATCTTTTTCACCACTGGCACAGCCACACAGCAAATCAAGAGTAGAATACAGGGGAGTTGTCATTGGAATAGCAGTGGGATTTGTATCTGGAGTAGCTTGCTTTATTATAACAGATAGATATGTATGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

691

Amino Acids

75.85

Weight (kDa)

5.23

Isoelectric Point (pI)

39.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 68	1e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	152 - 309	7e-07	Leucine-rich repeat region
LRR_14	PF23598	321 - 502	9.4e-06	Leucine-rich repeat region
LRR_8	PF13855	533 - 589	2.4e-06	Leucine rich repeat
LRR_8	PF13855	554 - 613	4.6e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2042
AccB7I	CCANNNNNTGG	2 cut(s)	593, 1646
AccIII	TCCGGA	1 cut(s)	796
AciI	CCGC	2 cut(s)	1363, 1911
AclWI	GGATC	4 cut(s)	1235, 1683, 1843, 1910
AcoI	YGGCCR	3 cut(s)	185, 1075, 1637
AcsI	RAATTY	7 cut(s)	391, 883, 1099, 1167, 1523, 1682, 1882
AfaI	GTAC	2 cut(s)	546, 830
AfiI	CCNNNNNNNGG	4 cut(s)	593, 1032, 1473, 1646
AflIII	ACRYGT	1 cut(s)	1332
AhlI	ACTAGT	1 cut(s)	280
AjiI	CACGTC	1 cut(s)	84
AjnI	CCWGG	3 cut(s)	187, 586, 1385
AleI	CACNNNNGTG	1 cut(s)	540
AloI	GAACNNNNNNTCC	2 cut(s)	1643, 1675
Alw26I	GTCTC	3 cut(s)	1412, 1733, 1758
AlwI	GGATC	4 cut(s)	1235, 1683, 1843, 1910
Aor13HI	TCCGGA	1 cut(s)	796
AoxI	GGCC	5 cut(s)	185, 969, 1075, 1383, 1637
ApeKI	GCWGC	2 cut(s)	177, 1567
ApoI	RAATTY	7 cut(s)	391, 883, 1099, 1167, 1523, 1682, 1882
ArsI	GACNNNNNNTTYG	2 cut(s)	1732, 1764
AseI	ATTAAT	1 cut(s)	774
Asp700I	GAANNNNTTC	1 cut(s)	919
AspS9I	GGNCC	5 cut(s)	431, 500, 932, 1700, 1872
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	5 cut(s)	527, 587, 1198, 1406, 1935
AsuII	TTCGAA	2 cut(s)	1130, 1893
AvaII	GGWCC	5 cut(s)	431, 500, 932, 1700, 1872
BalI	TGGCCA	3 cut(s)	187, 1077, 1639
BarI	GAAGNNNNNNTAC	2 cut(s)	1705, 1737
BbsI	GAAGAC	1 cut(s)	283
BbvI	GCAGC	2 cut(s)	164, 1579
BccI	CCATC	6 cut(s)	140, 144, 630, 995, 1021, 1835
BciT130I	CCWGG	3 cut(s)	189, 588, 1387
BciVI	GTATCC	1 cut(s)	321
BcnI	CCSGG	1 cut(s)	718
BcoDI	GTCTC	3 cut(s)	1412, 1733, 1758
BcuI	ACTAGT	1 cut(s)	280
BfaI	CTAG	3 cut(s)	281, 983, 1455
BfmI	CTRYAG	3 cut(s)	244, 303, 1854
BfuI	GTATCC	1 cut(s)	321
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	3 cut(s)	178, 1568, 1912
BlsI	GCNGC	3 cut(s)	179, 1569, 1913
BmcAI	AGTACT	1 cut(s)	830
Bme1390I	CCNGG	4 cut(s)	189, 588, 718, 1387
Bme18I	GGWCC	5 cut(s)	431, 500, 932, 1700, 1872
BmgBI	CACGTC	1 cut(s)	84
BmgT120I	GGNCC	5 cut(s)	431, 500, 932, 1700, 1872
BmiI	GGNNCC	6 cut(s)	433, 1361, 1478, 1512, 1652, 1873
BmrFI	CCNGG	4 cut(s)	189, 588, 718, 1387
BmrI	ACTGGG	1 cut(s)	1306
BmsI	GCATC	1 cut(s)	711
BmuI	ACTGGG	1 cut(s)	1306
BpiI	GAAGAC	1 cut(s)	283
BpmI	CTGGAG	2 cut(s)	1464, 2043
Bpu10I	CCTNAGC	1 cut(s)	323
Bpu14I	TTCGAA	2 cut(s)	1130, 1893
BpuEI	CTTGAG	2 cut(s)	42, 1090
BpuMI	CCSGG	1 cut(s)	718
BsaBI	GATNNNNATC	2 cut(s)	636, 2017
BsaJI	CCNNGG	1 cut(s)	814
BsaWI	WCCGGW	1 cut(s)	796
Bsc4I	CCNNNNNNNGG	4 cut(s)	593, 1032, 1473, 1646
Bse1I	ACTGG	7 cut(s)	43, 440, 466, 994, 1312, 1447, 1953
Bse3DI	GCAATG	3 cut(s)	107, 963, 1114
Bse8I	GATNNNNATC	2 cut(s)	636, 2017
BseAI	TCCGGA	1 cut(s)	796
BseBI	CCWGG	3 cut(s)	189, 588, 1387
BseDI	CCNNGG	1 cut(s)	814
BseGI	GGATG	6 cut(s)	27, 155, 726, 805, 1013, 1846
BseJI	GATNNNNATC	2 cut(s)	636, 2017
BseLI	CCNNNNNNNGG	4 cut(s)	593, 1032, 1473, 1646
BseMI	GCAATG	3 cut(s)	107, 963, 1114
BseMII	CTCAG	1 cut(s)	716
BseNI	ACTGG	7 cut(s)	43, 440, 466, 994, 1312, 1447, 1953
BseXI	GCAGC	2 cut(s)	164, 1579
BshFI	GGCC	5 cut(s)	187, 971, 1077, 1385, 1639
BsiSI	CCGG	3 cut(s)	717, 797, 1382
BslFI	GGGAC	4 cut(s)	330, 417, 454, 1885
BslI	CCNNNNNNNGG	4 cut(s)	593, 1032, 1473, 1646
BsmAI	GTCTC	3 cut(s)	1412, 1733, 1758
BsmFI	GGGAC	4 cut(s)	330, 417, 454, 1885
BsmI	GAATGC	2 cut(s)	696, 1552
BsnI	GGCC	5 cut(s)	187, 971, 1077, 1385, 1639
Bsp119I	TTCGAA	2 cut(s)	1130, 1893
Bsp13I	TCCGGA	1 cut(s)	796
Bsp143I	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
BspACI	CCGC	2 cut(s)	1363, 1911
BspANI	GGCC	5 cut(s)	187, 971, 1077, 1385, 1639
BspCNI	CTCAG	1 cut(s)	717
BspEI	TCCGGA	1 cut(s)	796
BspHI	TCATGA	1 cut(s)	120
BspLI	GGNNCC	6 cut(s)	433, 1361, 1478, 1512, 1652, 1873
BspMAI	CTGCAG	1 cut(s)	1858
BspPI	GGATC	4 cut(s)	1235, 1683, 1843, 1910
BspT104I	TTCGAA	2 cut(s)	1130, 1893
BsrDI	GCAATG	3 cut(s)	107, 963, 1114
BsrI	ACTGG	7 cut(s)	43, 440, 466, 994, 1312, 1447, 1953
BssECI	CCNNGG	1 cut(s)	814
BssMI	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
BssT1I	CCWWGG	1 cut(s)	814
Bst2UI	CCWGG	3 cut(s)	189, 588, 1387
Bst4CI	ACNGT	4 cut(s)	101, 828, 950, 1691
Bst6I	CTCTTC	4 cut(s)	172, 211, 510, 1415
BstBI	TTCGAA	2 cut(s)	1130, 1893
BstC8I	GCNNGC	3 cut(s)	1138, 1602, 2032
BstDEI	CTNAG	7 cut(s)	323, 403, 410, 664, 725, 1417, 1472
BstEII	GGTNACC	1 cut(s)	575
BstF5I	GGATG	6 cut(s)	27, 155, 726, 805, 1013, 1846
BstKTI	GATC	8 cut(s)	409, 640, 943, 982, 1243, 1678, 1851, 1918
BstMAI	GTCTC	3 cut(s)	1412, 1733, 1758
BstMBI	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
BstNI	CCWGG	3 cut(s)	189, 588, 1387
BstNSI	RCATGY	1 cut(s)	1336
BstPI	GGTNACC	1 cut(s)	575
BstSCI	CCNGG	4 cut(s)	187, 586, 716, 1385
BstSFI	CTRYAG	3 cut(s)	244, 303, 1854
BstV1I	GCAGC	2 cut(s)	164, 1579
BstV2I	GAAGAC	1 cut(s)	283
BstX2I	RGATCY	3 cut(s)	406, 1675, 1848
BstXI	CCANNNNNNTGG	2 cut(s)	815, 1001
BstYI	RGATCY	3 cut(s)	406, 1675, 1848
BsuI	GTATCC	1 cut(s)	321
BsuRI	GGCC	5 cut(s)	187, 971, 1077, 1385, 1639
BtrI	CACGTC	1 cut(s)	84
BtsCI	GGATG	6 cut(s)	27, 155, 726, 805, 1013, 1846
BtsI	GCAGTG	2 cut(s)	1184, 2013
BtsIMutI	CAGTG	5 cut(s)	862, 1184, 1319, 1946, 2013
Cac8I	GCNNGC	3 cut(s)	1138, 1602, 2032
CciI	TCATGA	1 cut(s)	120
Cfr13I	GGNCC	5 cut(s)	431, 500, 932, 1700, 1872
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	2 cut(s)	545, 829
CspCI	CAANNNNNGTGG	4 cut(s)	1054, 1089, 1770, 1805
CviAII	CATG	6 cut(s)	121, 614, 901, 1210, 1333, 1667
CviQI	GTAC	2 cut(s)	545, 829
DdeI	CTNAG	7 cut(s)	323, 403, 410, 664, 725, 1417, 1472
DpnI	GATC	8 cut(s)	408, 639, 942, 981, 1242, 1677, 1850, 1917
DpnII	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
EaeI	YGGCCR	3 cut(s)	185, 1075, 1637
Eam1104I	CTCTTC	4 cut(s)	172, 211, 510, 1415
EarI	CTCTTC	4 cut(s)	172, 211, 510, 1415
Eco130I	CCWWGG	1 cut(s)	814
Eco32I	GATATC	2 cut(s)	766, 1450
Eco47I	GGWCC	5 cut(s)	431, 500, 932, 1700, 1872
Eco91I	GGTNACC	1 cut(s)	575
EcoO109I	RGGNCCY	1 cut(s)	1872
EcoO65I	GGTNACC	1 cut(s)	575
EcoRII	CCWGG	3 cut(s)	187, 586, 1385
EcoRV	GATATC	2 cut(s)	766, 1450
EcoT14I	CCWWGG	1 cut(s)	814
ErhI	CCWWGG	1 cut(s)	814
FaeI	CATG	6 cut(s)	124, 617, 904, 1213, 1336, 1670
FaqI	GGGAC	4 cut(s)	330, 417, 454, 1885
FatI	CATG	6 cut(s)	120, 613, 900, 1209, 1332, 1666
Fnu4HI	GCNGC	3 cut(s)	178, 1568, 1912
FokI	GGATG	6 cut(s)	14, 162, 733, 812, 1000, 1853
Fsp4HI	GCNGC	3 cut(s)	178, 1568, 1912
FspBI	CTAG	3 cut(s)	281, 983, 1455
GluI	GCNGC	3 cut(s)	178, 1568, 1912
GsuI	CTGGAG	2 cut(s)	1464, 2043
HaeIII	GGCC	5 cut(s)	187, 971, 1077, 1385, 1639
HapII	CCGG	3 cut(s)	717, 797, 1382
Hin1II	CATG	6 cut(s)	124, 617, 904, 1213, 1336, 1670
HindIII	AAGCTT	4 cut(s)	661, 710, 1459, 1888
HinfI	GANTC	5 cut(s)	230, 299, 1186, 1201, 1741
HpaII	CCGG	3 cut(s)	717, 797, 1382
HphI	GGTGA	5 cut(s)	527, 587, 1198, 1406, 1935
Hpy166II	GTNNAC	2 cut(s)	545, 562
Hpy8I	GTNNAC	2 cut(s)	545, 562
HpyAV	CCTTC	9 cut(s)	468, 548, 1172, 1261, 1364, 1524, 1673, 1885, 1889
HpyCH4III	ACNGT	4 cut(s)	101, 828, 950, 1691
HpyCH4IV	ACGT	1 cut(s)	83
HpyF3I	CTNAG	7 cut(s)	323, 403, 410, 664, 725, 1417, 1472
HpySE526I	ACGT	1 cut(s)	83
Hsp92II	CATG	6 cut(s)	124, 617, 904, 1213, 1336, 1670
Kpn2I	TCCGGA	1 cut(s)	796
Kzo9I	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
LmnI	GCTCC	3 cut(s)	262, 1476, 1927
Lsp1109I	GCAGC	2 cut(s)	164, 1579
LweI	GCATC	1 cut(s)	711
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	3 cut(s)	281, 983, 1455
MaeII	ACGT	1 cut(s)	83
MaeIII	GTNAC	5 cut(s)	34, 575, 704, 737, 1322
MalI	GATC	8 cut(s)	408, 639, 942, 981, 1242, 1677, 1850, 1917
MboI	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
MfeI	CAATTG	2 cut(s)	936, 1835
MflI	RGATCY	3 cut(s)	406, 1675, 1848
MlsI	TGGCCA	3 cut(s)	187, 1077, 1639
MluNI	TGGCCA	3 cut(s)	187, 1077, 1639
MlyI	GAGTC	1 cut(s)	1735
MmeI	TCCRAC	3 cut(s)	240, 533, 1268
Mox20I	TGGCCA	3 cut(s)	187, 1077, 1639
MroI	TCCGGA	1 cut(s)	796
MroXI	GAANNNNTTC	1 cut(s)	919
MscI	TGGCCA	3 cut(s)	187, 1077, 1639
MseI	TTAA	8 cut(s)	255, 333, 747, 774, 906, 1095, 1463, 1794
MslI	CAYNNNNRTG	1 cut(s)	540
Msp20I	TGGCCA	3 cut(s)	187, 1077, 1639
MspI	CCGG	3 cut(s)	717, 797, 1382
MspR9I	CCNGG	4 cut(s)	189, 588, 718, 1387
MunI	CAATTG	2 cut(s)	936, 1835
Mva1269I	GAATGC	2 cut(s)	696, 1552
MvaI	CCWGG	3 cut(s)	189, 588, 1387
NciI	CCSGG	1 cut(s)	718
NdeII	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
NlaIII	CATG	6 cut(s)	124, 617, 904, 1213, 1336, 1670
NlaIV	GGNNCC	6 cut(s)	433, 1361, 1478, 1512, 1652, 1873
NmuCI	GTSAC	1 cut(s)	575
NspI	RCATGY	1 cut(s)	1336
NspV	TTCGAA	2 cut(s)	1130, 1893
OliI	CACNNNNGTG	1 cut(s)	540
PagI	TCATGA	1 cut(s)	120
PciI	ACATGT	1 cut(s)	1332
PctI	GAATGC	2 cut(s)	696, 1552
PdmI	GAANNNNTTC	1 cut(s)	919
PfeI	GAWTC	4 cut(s)	230, 299, 1186, 1201
PflMI	CCANNNNNTGG	2 cut(s)	593, 1646
PfoI	TCCNGGA	1 cut(s)	716
PkrI	GCNGC	3 cut(s)	179, 1569, 1913
PleI	GAGTC	1 cut(s)	1735
PpsI	GAGTC	1 cut(s)	1735
PpuMI	RGGWCCY	1 cut(s)	1872
PscI	ACATGT	1 cut(s)	1332
PshBI	ATTAAT	1 cut(s)	774
PsiI	TTATAA	1 cut(s)	2042
Psp5II	RGGWCCY	1 cut(s)	1872
Psp6I	CCWGG	3 cut(s)	187, 586, 1385
PspEI	GGTNACC	1 cut(s)	575
PspGI	CCWGG	3 cut(s)	187, 586, 1385
PspN4I	GGNNCC	6 cut(s)	433, 1361, 1478, 1512, 1652, 1873
PspPI	GGNCC	5 cut(s)	431, 500, 932, 1700, 1872
PspPPI	RGGWCCY	1 cut(s)	1872
PstI	CTGCAG	1 cut(s)	1858
PsuI	RGATCY	3 cut(s)	406, 1675, 1848
RsaI	GTAC	2 cut(s)	546, 830
RsaNI	GTAC	2 cut(s)	545, 829
RseI	CAYNNNNRTG	1 cut(s)	540
SaqAI	TTAA	8 cut(s)	255, 333, 747, 774, 906, 1095, 1463, 1794
SatI	GCNGC	3 cut(s)	178, 1568, 1912
Sau3AI	GATC	8 cut(s)	406, 637, 940, 979, 1240, 1675, 1848, 1915
Sau96I	GGNCC	5 cut(s)	431, 500, 932, 1700, 1872
SbfI	CCTGCAGG	1 cut(s)	1858
ScaI	AGTACT	1 cut(s)	830
SchI	GAGTC	1 cut(s)	1735
ScrFI	CCNGG	4 cut(s)	189, 588, 718, 1387
SdaI	CCTGCAGG	1 cut(s)	1858
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	1 cut(s)	711
SfcI	CTRYAG	3 cut(s)	244, 303, 1854
SfuI	TTCGAA	2 cut(s)	1130, 1893
SinI	GGWCC	5 cut(s)	431, 500, 932, 1700, 1872
SmiMI	CAYNNNNRTG	1 cut(s)	540
SmlI	CTYRAG	2 cut(s)	57, 1069
SmoI	CTYRAG	2 cut(s)	57, 1069
SpeI	ACTAGT	1 cut(s)	280
Sse8387I	CCTGCAGG	1 cut(s)	1858
SsiI	CCGC	2 cut(s)	1363, 1911
SspI	AATATT	1 cut(s)	1495
SspMI	CTAG	3 cut(s)	281, 983, 1455
StyD4I	CCNGG	4 cut(s)	187, 586, 716, 1385
StyI	CCWWGG	1 cut(s)	814
TaaI	ACNGT	4 cut(s)	101, 828, 950, 1691
TaiI	ACGT	1 cut(s)	86
TaqI	TCGA	5 cut(s)	65, 1130, 1583, 1724, 1893
TatI	WGTACW	2 cut(s)	544, 828
TauI	GCSGC	1 cut(s)	1914
TfiI	GAWTC	4 cut(s)	230, 299, 1186, 1201
Tru1I	TTAA	8 cut(s)	255, 333, 747, 774, 906, 1095, 1463, 1794
Tru9I	TTAA	8 cut(s)	255, 333, 747, 774, 906, 1095, 1463, 1794
TscAI	CASTG	5 cut(s)	862, 1184, 1319, 1953, 2013
TseFI	GTSAC	1 cut(s)	575
TseI	GCWGC	2 cut(s)	177, 1567
Tsp45I	GTSAC	1 cut(s)	575
TspDTI	ATGAA	9 cut(s)	109, 198, 371, 746, 912, 1094, 1226, 1239, 1655
TspRI	CASTG	5 cut(s)	862, 1184, 1319, 1953, 2013
Van91I	CCANNNNNTGG	2 cut(s)	593, 1646
VpaK11BI	GGWCC	5 cut(s)	431, 500, 932, 1700, 1872
VspI	ATTAAT	1 cut(s)	774
XapI	RAATTY	7 cut(s)	391, 883, 1099, 1167, 1523, 1682, 1882
XceI	RCATGY	1 cut(s)	1336
XmnI	GAANNNNTTC	1 cut(s)	919
XspI	CTAG	3 cut(s)	281, 983, 1455
ZrmI	AGTACT	1 cut(s)	830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.