Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Forward (+)

6180198 .. 6182273

Gene Structure 2076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1088300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGGTGCTCAAGATTTCTGGGTTTTCATTTTTGTTATTGGGTTTTGCTTACAAGCTCGGGTTTCGAGCTCTCAAAACCTGACATGCAATCCAAATGATTTGAAGGCATTGGAGGATTTCATGAACGGTATAGATTCTGTGATTGATGCGTGGGGTAGCAATTTCTCATCTGATTGCTGCAAATGGGCAGGCATCACTTGCAATTCTTCTTCCTCTCTCGGATTGAACGATTCCATTGATACTTATAGAGTGGTTAAGTTGGAGCTTCCAAAGAGAAGGCTAGTGGGAAATCTCTCTGCATCTTTAGGCACTTTGGACCAGCTTAGAACCCTCAATCTCTCTCAAAATTTCCTCAAACACTCGCTTCCAATTTCGCTCTTCCATTTGCCGAATTTAGAGTTCTTAGACTTGAGCTCTAATGATTTTTCCGGCCCCATTCCTTTCGATATCGAATTGCCTTCAATCCGGTTGCTTGAAATTTCTCAAAACTTTTTGAATGGTACCCTTCCGGCCAGCATCTGTGACAAGTCTACTCAGCTTCGAGCACTGAAGTTGGCTGTGAACTACTTCTCTGGCAACCTCCCACCAGGTCTTGGCAATTGTACTTCCGTGGAGGACCTCCGTCTAGGCATGAATAATTTCAATGGCGGTGTGCCCGAAGGTCTATTTCGTCTGCGAAAGCTAACCCAGTTGAACATTCAAGATAACAAGCTTTCCGGGGTGCTCAGCGAAGAATTCGGTAACCTCATTAATCTTGTTCATTTGGATATCTCAACTAATGAATTTTCAGGAACCATCCCAGATGTTTTCCACAGGCTTGGAAGATTACAGAATCTTGTATTCCATTCAAATCGTTTTGGTGGTCGGATACCCCCTTTCTTGTCGAGTTCCTCGACCATCTCTTTGCTTAATTTGAGAAACAATTCATTGCAGGGCACAATTGATCTTAATTGTTCAGCAATGACTAGTTTGACCACTCTTGATCTCGGTTCCAATCAGTTTGATGGGCCTATTCCCTCCAATCTTCCCTCTTGTCGACATTTGAATAATGTCAATCTTGCCCGTAACAACTTCACGGGCGAAATACCAGAAAGCTTCAAGAGTTTCCATAGCCTCTCTTACCTCTCGCTGTCAAATTCCAGCGTTTCCAATATCTCTTCTGCCTTACAAATTTTACAGCAATGCCGGAACCTGACTACTTTGGTTCTCACCTTGAACTTCCGCGGCGAAGAATTTCCTGCTGATCCGACCCTTCATTTTGAAAAGTTGAAGGTTCTTATTATTGCAAATTGTAGGCTCACAGGTGTAATACCTCAATGGTTGAGTACTAGCAGCAGATTGCAATTTTTGGATATATCGTGGAACCAATTGCAAGGAACAATTCCAGGCTGGTTTGGCAATTTTAGCAGTCTTTTCTACTTGGACATGTCGAATAATTCACTTACGGGTGAAATCCCTATAAGCTTAACTGGATTACCGAGCCTCAATAGTGGGAGGATCTCCATTGAGGAACCTTCCCCTGATTTCCTTCTACTCATGAAGAGGAATGTAAGTGCACGAGCGTTGCAGTACAATCAAGTGTGGCGATTTCCACCGACGCTGGGACTAAGTAACAATAATCTTAGCGGACCAGTCTGGCCCGAGTTTGGGAAACTGAAATTGCTTCATGTTTTGGATCTCAAGTTCAACAGTCTAGCAGGACCGATTCCGAGTAGTTTATCTGGCATGTCCAACTTAGAGACTCTGGATTTGTCTCATAACAAGCTTTCGGGGACACTCCCGCCTTCGCTGGTCAATCTCAACTTCTTGTCCAAGTTTAGCGTTGCAGACAATCAGTTATATGGGGTGATCCCTACAGGAGGTCAGTTTTCGACCTTCTCAAGTTCAAGCTTTGAAGGGAACAGTCTTTGCGGATACGATGCTTCCCCTTGTCCAGCAGGACTGGATGCTCCTCTGCGAACATGGTTCGGGAAATCGAGCAAGGATTATACAGGAGTTATTGCCGGAGTCGGTGTTGGATTTGTATTTGGAATAGCATGTTTCATTGGAATAGATAGGTACGTCTGGACATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase

Protein Analysis

692

Amino Acids

75.69

Weight (kDa)

6.09

Isoelectric Point (pI)

36.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 68	1.9e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	100 - 142	8e-07	Leucine rich repeat
LRR_14	PF23598	100 - 306	6.6e-10	Leucine-rich repeat region
LRR_4	PF12799	107 - 143	8.6e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	226 - 286	2.5e-07	Leucine rich repeat
LRR_8	PF13855	555 - 613	9.9e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	500
AccB1I	GGYRCC	1 cut(s)	500
AccB7I	CCANNNNNTGG	1 cut(s)	593
AccI	GTMKAC	2 cut(s)	530, 1036
AccII	CGCG	1 cut(s)	1224
AciI	CCGC	6 cut(s)	648, 1222, 1224, 1626, 1781, 1911
AclWI	GGATC	4 cut(s)	1238, 1505, 1683, 1843
AcoI	YGGCCR	1 cut(s)	510
AcsI	RAATTY	8 cut(s)	346, 391, 477, 734, 782, 1135, 1170, 1232
AcuI	CTGAAG	1 cut(s)	569
AfaI	GTAC	5 cut(s)	502, 604, 1327, 1571, 2060
AfiI	CCNNNNNNNGG	5 cut(s)	593, 1601, 1646, 1647, 1859
AflIII	ACRYGT	1 cut(s)	1425
AhlI	ACTAGT	1 cut(s)	965
AjnI	CCWGG	2 cut(s)	586, 1384
AloI	GAACNNNNNNTCC	2 cut(s)	1667, 1699
Alw21I	GWGCWC	6 cut(s)	10, 71, 416, 547, 726, 1558
Alw26I	GTCTC	2 cut(s)	1733, 1758
Alw44I	GTGCAC	1 cut(s)	1554
AlwI	GGATC	4 cut(s)	1238, 1505, 1683, 1843
AlwNI	CAGNNNCTG	1 cut(s)	519
Ama87I	CYCGRG	2 cut(s)	57, 1640
AoxI	GGCC	4 cut(s)	430, 510, 1007, 1637
ApaLI	GTGCAC	1 cut(s)	1554
ApeKI	GCWGC	2 cut(s)	177, 1332
ApoI	RAATTY	8 cut(s)	346, 391, 477, 734, 782, 1135, 1170, 1232
ArsI	GACNNNNNNTTYG	4 cut(s)	886, 918, 1732, 1764
AseI	ATTAAT	1 cut(s)	750
Asp700I	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
Asp718I	GGTACC	1 cut(s)	500
AspS9I	GGNCC	7 cut(s)	316, 431, 616, 1007, 1628, 1638, 1700
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	3 cut(s)	1201, 1460, 1858
AvaI	CYCGRG	2 cut(s)	57, 1640
AvaII	GGWCC	4 cut(s)	316, 616, 1628, 1700
BaeGI	GKGCMC	3 cut(s)	657, 938, 1558
BanI	GGYRCC	1 cut(s)	500
BanII	GRGCYC	2 cut(s)	71, 416
BauI	CACGAG	1 cut(s)	1557
Bbv12I	GWGCWC	6 cut(s)	10, 71, 416, 547, 726, 1558
BbvI	GCAGC	2 cut(s)	164, 1344
BccI	CCATC	3 cut(s)	803, 905, 998
BciT130I	CCWGG	2 cut(s)	588, 1386
BciVI	GTATCC	2 cut(s)	861, 1907
BcnI	CCSGG	1 cut(s)	718
BcoDI	GTCTC	2 cut(s)	1733, 1758
BcuI	ACTAGT	1 cut(s)	965
BfaI	CTAG	5 cut(s)	281, 626, 966, 1329, 1694
BfmI	CTRYAG	1 cut(s)	1854
BfuI	GTATCC	2 cut(s)	861, 1907
BisI	GCNGC	3 cut(s)	178, 1225, 1333
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	3 cut(s)	179, 1226, 1334
BmcAI	AGTACT	1 cut(s)	1327
Bme1390I	CCNGG	3 cut(s)	588, 718, 1386
Bme18I	GGWCC	4 cut(s)	316, 616, 1628, 1700
BmeT110I	CYCGRG	2 cut(s)	57, 1640
BmgT120I	GGNCC	7 cut(s)	316, 431, 616, 1007, 1628, 1638, 1700
BmiI	GGNNCC	7 cut(s)	433, 502, 793, 991, 1190, 1364, 1512
BmrFI	CCNGG	3 cut(s)	588, 718, 1386
BmrI	ACTGGG	1 cut(s)	682
BmsI	GCATC	6 cut(s)	136, 201, 308, 525, 1909, 1936
BmuI	ACTGGG	1 cut(s)	682
BoxI	GACNNNNGTC	1 cut(s)	621
Bpu1102I	GCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	3 cut(s)	430, 1664, 1864
BpuMI	CCSGG	1 cut(s)	718
BsaJI	CCNNGG	3 cut(s)	609, 717, 1222
BsaWI	WCCGGW	1 cut(s)	465
BsaXI	ACNNNNNCTCC	2 cut(s)	1998, 2028
Bsc4I	CCNNNNNNNGG	5 cut(s)	593, 1601, 1646, 1647, 1859
Bse1I	ACTGG	4 cut(s)	688, 1474, 1631, 1947
Bse3DI	GCAATG	3 cut(s)	926, 966, 1187
BseBI	CCWGG	2 cut(s)	588, 1386
BseDI	CCNNGG	3 cut(s)	609, 717, 1222
BseGI	GGATG	2 cut(s)	795, 1951
BseLI	CCNNNNNNNGG	5 cut(s)	593, 1601, 1646, 1647, 1859
BseMI	GCAATG	3 cut(s)	926, 966, 1187
BseMII	CTCAG	2 cut(s)	548, 739
BseNI	ACTGG	4 cut(s)	688, 1474, 1631, 1947
BseRI	GAGGAG	1 cut(s)	1941
BseSI	GKGCMC	3 cut(s)	657, 938, 1558
BseXI	GCAGC	2 cut(s)	164, 1344
BseYI	CCCAGC	1 cut(s)	1600
Bsh1236I	CGCG	1 cut(s)	1224
BshFI	GGCC	4 cut(s)	432, 512, 1009, 1639
BshNI	GGYRCC	1 cut(s)	500
BsiHKAI	GWGCWC	6 cut(s)	10, 71, 416, 547, 726, 1558
BsiHKCI	CYCGRG	2 cut(s)	57, 1640
BsiSI	CCGG	6 cut(s)	429, 466, 509, 717, 1186, 2004
BslFI	GGGAC	2 cut(s)	1617, 1786
BslI	CCNNNNNNNGG	5 cut(s)	593, 1601, 1646, 1647, 1859
BsmAI	GTCTC	2 cut(s)	1733, 1758
BsmFI	GGGAC	2 cut(s)	1617, 1786
BsnI	GGCC	4 cut(s)	432, 512, 1009, 1639
BsoBI	CYCGRG	2 cut(s)	57, 1640
Bsp1286I	GDGCHC	8 cut(s)	10, 71, 416, 547, 657, 726, 938, 1558
Bsp143I	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	6 cut(s)	648, 1222, 1224, 1626, 1781, 1911
BspANI	GGCC	4 cut(s)	432, 512, 1009, 1639
BspCNI	CTCAG	2 cut(s)	547, 738
BspFNI	CGCG	1 cut(s)	1224
BspHI	TCATGA	2 cut(s)	120, 1536
BspLI	GGNNCC	7 cut(s)	433, 502, 793, 991, 1190, 1364, 1512
BspPI	GGATC	4 cut(s)	1238, 1505, 1683, 1843
BspQI	GCTCTTC	1 cut(s)	383
BspT107I	GGYRCC	1 cut(s)	500
BsrDI	GCAATG	3 cut(s)	926, 966, 1187
BsrI	ACTGG	4 cut(s)	688, 1474, 1631, 1947
BssECI	CCNNGG	3 cut(s)	609, 717, 1222
BssMI	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
BssSI	CACGAG	1 cut(s)	1557
Bst2BI	CACGAG	1 cut(s)	1557
Bst2UI	CCWGG	2 cut(s)	588, 1386
Bst4CI	ACNGT	3 cut(s)	128, 1691, 1904
Bst6I	CTCTTC	3 cut(s)	383, 1162, 1535
BstAPI	GCANNNNNTGC	1 cut(s)	198
BstC8I	GCNNGC	2 cut(s)	190, 514
BstDEI	CTNAG	7 cut(s)	323, 403, 534, 725, 1607, 1622, 1735
BstDSI	CCRYGG	2 cut(s)	609, 1222
BstEII	GGTNACC	1 cut(s)	740
BstENI	CCTNNNNNAGG	1 cut(s)	1857
BstF5I	GGATG	2 cut(s)	795, 1951
BstFNI	CGCG	1 cut(s)	1224
BstKTI	GATC	6 cut(s)	946, 985, 1246, 1500, 1678, 1851
BstMAI	GTCTC	2 cut(s)	1733, 1758
BstMBI	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
BstMWI	GCNNNNNNNGC	3 cut(s)	198, 1395, 1404
BstNI	CCWGG	2 cut(s)	588, 1386
BstNSI	RCATGY	4 cut(s)	87, 1429, 1729, 2040
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	1 cut(s)	740
BstSCI	CCNGG	3 cut(s)	586, 716, 1384
BstSFI	CTRYAG	1 cut(s)	1854
BstSLI	GKGCMC	3 cut(s)	657, 938, 1558
BstUI	CGCG	1 cut(s)	1224
BstV1I	GCAGC	2 cut(s)	164, 1344
BstX2I	RGATCY	2 cut(s)	1497, 1675
BstXI	CCANNNNNNTGG	1 cut(s)	818
BstYI	RGATCY	2 cut(s)	1497, 1675
BsuI	GTATCC	2 cut(s)	861, 1907
BsuRI	GGCC	4 cut(s)	432, 512, 1009, 1639
BtgI	CCRYGG	2 cut(s)	609, 1222
BtsCI	GGATG	2 cut(s)	795, 1951
BtsIMutI	CAGTG	1 cut(s)	545
Cac8I	GCNNGC	2 cut(s)	190, 514
CaiI	CAGNNNCTG	1 cut(s)	519
CciI	TCATGA	2 cut(s)	120, 1536
Cfr13I	GGNCC	7 cut(s)	316, 431, 616, 1007, 1628, 1638, 1700
Cfr42I	CCGCGG	1 cut(s)	1225
CseI	GACGC	1 cut(s)	1606
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	5 cut(s)	501, 603, 1326, 1570, 2059
CviAII	CATG	9 cut(s)	84, 121, 631, 1426, 1537, 1667, 1726, 1962, 2037
CviQI	GTAC	5 cut(s)	501, 603, 1326, 1570, 2059
DdeI	CTNAG	7 cut(s)	323, 403, 534, 725, 1607, 1622, 1735
DpnI	GATC	6 cut(s)	945, 984, 1245, 1499, 1677, 1850
DpnII	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
EaeI	YGGCCR	1 cut(s)	510
Eam1104I	CTCTTC	3 cut(s)	383, 1162, 1535
EarI	CTCTTC	3 cut(s)	383, 1162, 1535
Ecl136II	GAGCTC	2 cut(s)	69, 414
Eco24I	GRGCYC	2 cut(s)	71, 416
Eco32I	GATATC	2 cut(s)	448, 769
Eco47I	GGWCC	4 cut(s)	316, 616, 1628, 1700
Eco53kI	GAGCTC	2 cut(s)	69, 414
Eco57I	CTGAAG	1 cut(s)	569
Eco88I	CYCGRG	2 cut(s)	57, 1640
Eco91I	GGTNACC	1 cut(s)	740
EcoICRI	GAGCTC	2 cut(s)	69, 414
EcoNI	CCTNNNNNAGG	1 cut(s)	1857
EcoO109I	RGGNCCY	1 cut(s)	616
EcoO65I	GGTNACC	1 cut(s)	740
EcoRI	GAATTC	1 cut(s)	734
EcoRII	CCWGG	2 cut(s)	586, 1384
EcoRV	GATATC	2 cut(s)	448, 769
EcoT38I	GRGCYC	2 cut(s)	71, 416
FaeI	CATG	9 cut(s)	87, 124, 634, 1429, 1540, 1670, 1729, 1965, 2040
FaqI	GGGAC	2 cut(s)	1617, 1786
FatI	CATG	9 cut(s)	83, 120, 630, 1425, 1536, 1666, 1725, 1961, 2036
FauI	CCCGC	1 cut(s)	1788
FblI	GTMKAC	2 cut(s)	530, 1036
Fnu4HI	GCNGC	3 cut(s)	178, 1225, 1333
FokI	GGATG	2 cut(s)	782, 1958
FriOI	GRGCYC	2 cut(s)	71, 416
Fsp4HI	GCNGC	3 cut(s)	178, 1225, 1333
FspBI	CTAG	5 cut(s)	281, 626, 966, 1329, 1694
GluI	GCNGC	3 cut(s)	178, 1225, 1333
GsaI	CCCAGC	1 cut(s)	1604
HaeIII	GGCC	4 cut(s)	432, 512, 1009, 1639
HapII	CCGG	6 cut(s)	429, 466, 509, 717, 1186, 2004
HgaI	GACGC	1 cut(s)	1606
Hin1II	CATG	9 cut(s)	87, 124, 634, 1429, 1540, 1670, 1729, 1965, 2040
HincII	GTYRAC	1 cut(s)	1037
HindII	GTYRAC	1 cut(s)	1037
HindIII	AAGCTT	5 cut(s)	710, 1093, 1462, 1763, 1888
HinfI	GANTC	6 cut(s)	134, 230, 832, 1705, 1741, 2007
HpaII	CCGG	6 cut(s)	429, 466, 509, 717, 1186, 2004
HphI	GGTGA	3 cut(s)	1201, 1460, 1858
Hpy166II	GTNNAC	4 cut(s)	531, 562, 1037, 1556
Hpy188I	TCNGA	5 cut(s)	172, 221, 867, 1248, 1710
Hpy8I	GTNNAC	4 cut(s)	531, 562, 1037, 1556
Hpy99I	CGWCG	1 cut(s)	1600
HpyCH4III	ACNGT	3 cut(s)	128, 1691, 1904
HpyCH4IV	ACGT	1 cut(s)	2061
HpyF10VI	GCNNNNNNNGC	3 cut(s)	198, 1395, 1404
HpyF3I	CTNAG	7 cut(s)	323, 403, 534, 725, 1607, 1622, 1735
HpySE526I	ACGT	1 cut(s)	2061
Hsp92II	CATG	9 cut(s)	87, 124, 634, 1429, 1540, 1670, 1729, 1965, 2040
KpnI	GGTACC	1 cut(s)	504
KspI	CCGCGG	1 cut(s)	1225
Kzo9I	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
LguI	GCTCTTC	1 cut(s)	383
LmnI	GCTCC	2 cut(s)	262, 1954
Lsp1109I	GCAGC	2 cut(s)	164, 1344
LweI	GCATC	6 cut(s)	136, 201, 308, 525, 1909, 1936
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	5 cut(s)	281, 626, 966, 1329, 1694
MaeII	ACGT	1 cut(s)	2061
MaeIII	GTNAC	4 cut(s)	521, 740, 1064, 1610
MalI	GATC	6 cut(s)	945, 984, 1245, 1499, 1677, 1850
MboI	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
MboII	GAAGA	9 cut(s)	198, 201, 370, 743, 834, 1016, 1149, 1241, 1552
MfeI	CAATTG	3 cut(s)	598, 939, 1367
MflI	RGATCY	2 cut(s)	1497, 1675
MhlI	GDGCHC	8 cut(s)	10, 71, 416, 547, 657, 726, 938, 1558
MlyI	GAGTC	2 cut(s)	1735, 2016
MmeI	TCCRAC	5 cut(s)	240, 845, 1271, 1755, 1996
MroXI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
MseI	TTAA	6 cut(s)	255, 750, 909, 948, 1466, 2074
MspA1I	CMGCKG	1 cut(s)	1224
MspI	CCGG	6 cut(s)	429, 466, 509, 717, 1186, 2004
MspR9I	CCNGG	3 cut(s)	588, 718, 1386
MunI	CAATTG	3 cut(s)	598, 939, 1367
MvaI	CCWGG	2 cut(s)	588, 1386
MvnI	CGCG	1 cut(s)	1224
MwoI	GCNNNNNNNGC	3 cut(s)	198, 1395, 1404
NciI	CCSGG	1 cut(s)	718
NdeII	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
NlaIII	CATG	9 cut(s)	87, 124, 634, 1429, 1540, 1670, 1729, 1965, 2040
NlaIV	GGNNCC	7 cut(s)	433, 502, 793, 991, 1190, 1364, 1512
NmuCI	GTSAC	1 cut(s)	521
NspI	RCATGY	4 cut(s)	87, 1429, 1729, 2040
PagI	TCATGA	2 cut(s)	120, 1536
PciI	ACATGT	1 cut(s)	1425
PciSI	GCTCTTC	1 cut(s)	383
PcsI	WCGNNNNNNNCGW	2 cut(s)	225, 890
PdmI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
PfeI	GAWTC	4 cut(s)	134, 230, 832, 1705
PflMI	CCANNNNNTGG	1 cut(s)	593
PkrI	GCNGC	3 cut(s)	179, 1226, 1334
PleI	GAGTC	2 cut(s)	1735, 2015
PpsI	GAGTC	2 cut(s)	1735, 2015
PpuMI	RGGWCCY	1 cut(s)	616
PscI	ACATGT	1 cut(s)	1425
PshAI	GACNNNNGTC	1 cut(s)	621
PshBI	ATTAAT	1 cut(s)	750
Psp124BI	GAGCTC	2 cut(s)	71, 416
Psp5II	RGGWCCY	1 cut(s)	616
Psp6I	CCWGG	2 cut(s)	586, 1384
PspEI	GGTNACC	1 cut(s)	740
PspFI	CCCAGC	1 cut(s)	1600
PspGI	CCWGG	2 cut(s)	586, 1384
PspN4I	GGNNCC	7 cut(s)	433, 502, 793, 991, 1190, 1364, 1512
PspPI	GGNCC	7 cut(s)	316, 431, 616, 1007, 1628, 1638, 1700
PspPPI	RGGWCCY	1 cut(s)	616
PstNI	CAGNNNCTG	1 cut(s)	519
PsuI	RGATCY	2 cut(s)	1497, 1675
RsaI	GTAC	5 cut(s)	502, 604, 1327, 1571, 2060
RsaNI	GTAC	5 cut(s)	501, 603, 1326, 1570, 2059
SacI	GAGCTC	2 cut(s)	71, 416
SacII	CCGCGG	1 cut(s)	1225
SalI	GTCGAC	1 cut(s)	1035
SapI	GCTCTTC	1 cut(s)	383
SaqAI	TTAA	6 cut(s)	255, 750, 909, 948, 1466, 2074
SatI	GCNGC	3 cut(s)	178, 1225, 1333
Sau3AI	GATC	6 cut(s)	943, 982, 1243, 1497, 1675, 1848
Sau96I	GGNCC	7 cut(s)	316, 431, 616, 1007, 1628, 1638, 1700
ScaI	AGTACT	1 cut(s)	1327
SchI	GAGTC	2 cut(s)	1735, 2016
ScrFI	CCNGG	3 cut(s)	588, 718, 1386
SduI	GDGCHC	8 cut(s)	10, 71, 416, 547, 657, 726, 938, 1558
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	6 cut(s)	136, 201, 308, 525, 1909, 1936
SfcI	CTRYAG	1 cut(s)	1854
Sfr303I	CCGCGG	1 cut(s)	1225
SgrBI	CCGCGG	1 cut(s)	1225
SinI	GGWCC	4 cut(s)	316, 616, 1628, 1700
SmlI	CTYRAG	4 cut(s)	9, 409, 1679, 1879
SmoI	CTYRAG	4 cut(s)	9, 409, 1679, 1879
SpeI	ACTAGT	1 cut(s)	965
SsiI	CCGC	6 cut(s)	648, 1222, 1224, 1626, 1781, 1911
SspMI	CTAG	5 cut(s)	281, 626, 966, 1329, 1694
SstI	GAGCTC	2 cut(s)	71, 416
StyD4I	CCNGG	3 cut(s)	586, 716, 1384
TaaI	ACNGT	3 cut(s)	128, 1691, 1904
TaiI	ACGT	1 cut(s)	2064
TaqII	GACCGA	1 cut(s)	1717
TatI	WGTACW	3 cut(s)	602, 1325, 1569
TauI	GCSGC	1 cut(s)	1227
TfiI	GAWTC	4 cut(s)	134, 230, 832, 1705
Tru1I	TTAA	6 cut(s)	255, 750, 909, 948, 1466, 2074
Tru9I	TTAA	6 cut(s)	255, 750, 909, 948, 1466, 2074
TscAI	CASTG	1 cut(s)	552
TseFI	GTSAC	1 cut(s)	521
TseI	GCWGC	2 cut(s)	177, 1332
Tsp45I	GTSAC	1 cut(s)	521
TspGWI	ACGGA	2 cut(s)	598, 611
TspRI	CASTG	1 cut(s)	552
Van91I	CCANNNNNTGG	1 cut(s)	593
VneI	GTGCAC	1 cut(s)	1554
VpaK11BI	GGWCC	4 cut(s)	316, 616, 1628, 1700
VspI	ATTAAT	1 cut(s)	750
XagI	CCTNNNNNAGG	1 cut(s)	1857
XapI	RAATTY	8 cut(s)	346, 391, 477, 734, 782, 1135, 1170, 1232
XceI	RCATGY	4 cut(s)	87, 1429, 1729, 2040
XmiI	GTMKAC	2 cut(s)	530, 1036
XmnI	GAANNNNTTC	4 cut(s)	566, 638, 922, 1233
XspI	CTAG	5 cut(s)	281, 626, 966, 1329, 1694
ZrmI	AGTACT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.