Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Reverse (-)

66410223 .. 66413908

Gene Structure 3686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41365

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGGTGGTCAAGATTTCTGGGTGGTCATCTTTGTTATTGGGTTTTGCTTCCAAGCTCAGATTTTGAGCTCTCAGAACCTGACCTGCAATCTGAATGATTTGAAAGCACTGGAGGAGTTCATGGGCGGTCTGCAAAGTGTCATTGGTGATTGGGGCAAGAATTTCTCTGCTGATTGCTGCGAATGGGCAGGTATTACTTGCAACTCTTCATCCTCTCTTGGATTGAATGATTCTGTTGATACTCATAGAGTGGTTGAGTTGGATGTTTCGAGTAAAAAAATAATTGGGAATCTCTCTGAATCTTTGGGAAATTTGGAACAACTTAGAGCCCTCAATCTTTCTCACAACTTCCTTAAAAACTCACTTCCTGCCTCACTGTTCCAATTGCCAAATTTAAAGTACTTAGACTTGAGTTCTAATGACTTTTCTGGCCCCATTCCAGTTGATATTAATTTACCTTCACTTCTGTTCCTTGATATCTCTCAAAACTTCTTGAATGGTTCTATTCCACAAAGCATCTGTGCAAGTTCTACTAGGCTTCAGGTACTGAAGTTGGCTGTGAACTACTTGTCTGGTACTCTACCAGCAAGTCTTGGAAATTGTAGTTCCTTGGAGGACCTCTGTCTCCTCACGAATAATCTCTCTGGTGGTGTACCTGAGGGTATATATCAGCTGCAAAATCTGGTCAGATTGACCATTCAAGATAACAAGCTTACTGGGCCGCTGAGCAAAGAAGTTGGTAACCTGATTAACCTTAATCGTTTGGATATCTCAACGAATTGGTTTTCAGGGTCTATTCCCGATGTTTTCCACAGCCTTGGAAGATTACAGTATTTTGTTGCTCATTCCAATAATTTCAGTGGTGGGATACCTCCTTCCTTGTCAAGTTCCCCAAATATCTCTTTGCTTAATGTGAGAAACAATTCATTGGAGGGTCCAATTGATCTAAATTGTTCAGCAATGACAAGTTTGGCCTCTCTTGATCTAGGTTCAAACCAGTTTGCTGGGGTTATTCCATCCAATCTTCCCTCTTGTCGGCATTTGAATAATATAAATCTTGCCCGGAACAACTTGAGTGGCCCAATACCTGACAGCTTCAAGGATTTTCATACCCTCAATTACCTATCACTTTCGAACTCCAGCCATTCGAATCTATCATCTGCCCTTCAAATTTTACAGCAGTGTAAGAATCTAACTACTTTGGTTCTCACCATGAACTTCTATGATGAAAAATTGCCTGCTGATCCAACAATTCATTTTGCAAAGTTGAAGGTTTTCATTATTGCAAACAGTAGGCTCATAGGTTCAATACCCCAGTGGTTGAGTAAGAGCAGCAGATTACAGTTATTGGATATATCCTGGAACTACTTGGAAGGTACAGTTCCAGCTTGGTTTGGCAATTTTACTAATCTCTTCTACTTGGACATATCAAACAATTCTTTTACTGGGGATATCCCGAGAAGCTTGACTGGACTACAGAGCCTCATTTATTGGAATGTTTCCAAGGTTCAGGAACCTTCCCCTGATTTTCCTCTTTTCCAGAAAAAGAATGTAAGTGCAAGGGGATTGCAGTACAATCAAGTTTGGAGCTTTCCACCGACGCTGGCACTTGGCAACAATTATTTGACTCAAGGGGCGGCAAGAGGGCTTGCTTATTTGCATCAATCATGCGAGCCCCATATCGTTCATCGGGATATAAAGTCAAGTAATATTCTTTTAGATGAGAATTTTAAAGCCCACTTAGCTGATTTTGGTCTTGCAAGGCTCCTGCTTCCCTATGATACTCATGTAACAACTGATCTTGTTGGGACATTGGGCTACATTCCTCCTGAGTATGGCCAAGCCTCTGTTGCTACTTACAAGGGTGATGTATACAGTTTTGGGGTTGTTCTTTTGGAGCTTCTAACTGGAAAAAGGCCTATGGATATGTGCAAGCCAAAAGGAGCTCGGGATTTGATCTCTTGGGTGTTTCAGATGAAGAGGGAGAGGAGGGAAACTGAAGTGTTTGATCCAGTCATTTATGACAAGCAGAGAGAGCAGGAGCTTTTGTGTGTTTTTGAGATTGCATTGCTTTGCTTAAGCGGATGCCCTAAGGTGAGACCTTCAACTCAGCAGCTAGTTTCTTGGCTCGATAATATCAACATCAAAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

717

Amino Acids

79.21

Weight (kDa)

5.93

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 68	7e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	84 - 142	2.5e-07	Leucine rich repeat
LRR_14	PF23598	100 - 329	5.2e-14	Leucine-rich repeat region
LRR_4	PF12799	107 - 143	9.7e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	323 - 379	1.7e-06	Leucine rich repeat
LRR_8	PF13855	446 - 495	6.7e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	543 - 663	1.6e-20	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	546 - 707	5.9e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	92, 179
AccI	GTMKAC	1 cut(s)	1872
AciI	CCGC	4 cut(s)	126, 722, 1637, 2082
AclWI	GGATC	2 cut(s)	1238, 2003
AcoI	YGGCCR	1 cut(s)	1837
AcsI	RAATTY	5 cut(s)	160, 310, 391, 1170, 1726
AcuI	CTGAAG	3 cut(s)	524, 569, 2019
AfaI	GTAC	6 cut(s)	401, 546, 577, 654, 1378, 1574
AfiI	CCNNNNNNNGG	2 cut(s)	1035, 1835
AflII	CTTAAG	1 cut(s)	2077
AjnI	CCWGG	1 cut(s)	1358
Alw21I	GWGCWC	2 cut(s)	71, 1948
Alw26I	GTCTC	2 cut(s)	629, 2092
AlwI	GGATC	2 cut(s)	1238, 2003
AlwNI	CAGNNNCTG	2 cut(s)	79, 547
Ama87I	CYCGRG	2 cut(s)	1456, 1947
AoxI	GGCC	6 cut(s)	430, 719, 972, 1078, 1837, 1916
ApeKI	GCWGC	4 cut(s)	177, 673, 1332, 2113
ApoI	RAATTY	5 cut(s)	160, 310, 391, 1170, 1726
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	2 cut(s)	922, 1274
AspS9I	GGNCC	5 cut(s)	431, 616, 719, 935, 1079
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	4 cut(s)	158, 1201, 1877, 2107
AsuII	TTCGAA	2 cut(s)	1133, 1148
AvaI	CYCGRG	2 cut(s)	1456, 1947
AvaII	GGWCC	2 cut(s)	616, 935
AxyI	CCTNAGG	2 cut(s)	657, 2091
BaeI	ACNNNNGTAYC	4 cut(s)	536, 569, 1773, 1806
BalI	TGGCCA	1 cut(s)	1839
BanII	GRGCYC	4 cut(s)	71, 331, 1677, 1948
Bbv12I	GWGCWC	2 cut(s)	71, 1948
BbvI	GCAGC	4 cut(s)	164, 660, 1344, 2125
BccI	CCATC	1 cut(s)	1024
BciT130I	CCWGG	1 cut(s)	1360
BciVI	GTATCC	1 cut(s)	861
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	2 cut(s)	629, 2092
BfaI	CTAG	4 cut(s)	534, 986, 2117, 2152
BfmI	CTRYAG	1 cut(s)	1475
BfrI	CTTAAG	1 cut(s)	2077
BfuAI	ACCTGC	2 cut(s)	92, 179
BfuI	GTATCC	1 cut(s)	861
BisI	GCNGC	6 cut(s)	178, 674, 722, 1333, 1638, 2114
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	6 cut(s)	179, 675, 723, 1334, 1639, 2115
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	2 cut(s)	1063, 1360
Bme18I	GGWCC	2 cut(s)	616, 935
BmeT110I	CYCGRG	2 cut(s)	1456, 1947
BmgT120I	GGNCC	5 cut(s)	431, 616, 719, 935, 1079
BmiI	GGNNCC	4 cut(s)	433, 936, 1515, 1766
BmrFI	CCNGG	2 cut(s)	1063, 1360
BmrI	ACTGGG	3 cut(s)	726, 1309, 1455
BmsI	GCATC	3 cut(s)	525, 1669, 2075
BmuI	ACTGGG	3 cut(s)	726, 1309, 1455
BoxI	GACNNNNGTC	1 cut(s)	621
BpmI	CTGGAG	2 cut(s)	131, 1123
Bpu1102I	GCTNAGC	1 cut(s)	725
Bpu14I	TTCGAA	2 cut(s)	1133, 1148
BpuEI	CTTGAG	3 cut(s)	430, 1093, 1614
BpuMI	CCSGG	1 cut(s)	1063
BsaI	GGTCTC	1 cut(s)	2092
BsaJI	CCNNGG	3 cut(s)	609, 817, 1503
BsaXI	ACNNNNNCTCC	2 cut(s)	2033, 2063
Bsc4I	CCNNNNNNNGG	2 cut(s)	1035, 1835
Bse1I	ACTGG	9 cut(s)	114, 440, 721, 997, 1315, 1450, 1474, 1912, 2012
Bse21I	CCTNAGG	2 cut(s)	657, 2091
Bse3DI	GCAATG	2 cut(s)	966, 2066
BseBI	CCWGG	1 cut(s)	1360
BseDI	CCNNGG	3 cut(s)	609, 817, 1503
BseGI	GGATG	4 cut(s)	209, 268, 1016, 2090
BseLI	CCNNNNNNNGG	2 cut(s)	1035, 1835
BseMI	GCAATG	2 cut(s)	966, 2066
BseMII	CTCAG	6 cut(s)	71, 86, 648, 716, 1821, 2123
BseNI	ACTGG	9 cut(s)	114, 440, 721, 997, 1315, 1450, 1474, 1912, 2012
BseRI	GAGGAG	3 cut(s)	128, 617, 2002
BseXI	GCAGC	4 cut(s)	164, 660, 1344, 2125
BseYI	CCCAGC	1 cut(s)	1004
BshFI	GGCC	6 cut(s)	432, 721, 974, 1080, 1839, 1918
BsiHKAI	GWGCWC	2 cut(s)	71, 1948
BsiHKCI	CYCGRG	2 cut(s)	1456, 1947
BsiSI	CCGG	1 cut(s)	1063
BslFI	GGGAC	1 cut(s)	1822
BslI	CCNNNNNNNGG	2 cut(s)	1035, 1835
BsmAI	GTCTC	2 cut(s)	629, 2092
BsmFI	GGGAC	1 cut(s)	1822
BsnI	GGCC	6 cut(s)	432, 721, 974, 1080, 1839, 1918
Bso31I	GGTCTC	1 cut(s)	2092
BsoBI	CYCGRG	2 cut(s)	1456, 1947
Bsp119I	TTCGAA	2 cut(s)	1133, 1148
Bsp1286I	GDGCHC	4 cut(s)	71, 331, 1677, 1948
Bsp143I	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	4 cut(s)	126, 722, 1637, 2082
BspANI	GGCC	6 cut(s)	432, 721, 974, 1080, 1839, 1918
BspCNI	CTCAG	6 cut(s)	70, 85, 649, 717, 1822, 2122
BspLI	GGNNCC	4 cut(s)	433, 936, 1515, 1766
BspMI	ACCTGC	2 cut(s)	92, 179
BspPI	GGATC	2 cut(s)	1238, 2003
BspT104I	TTCGAA	2 cut(s)	1133, 1148
BspTI	CTTAAG	1 cut(s)	2077
BspTNI	GGTCTC	1 cut(s)	2092
BsrDI	GCAATG	2 cut(s)	966, 2066
BsrI	ACTGG	9 cut(s)	114, 440, 721, 997, 1315, 1450, 1474, 1912, 2012
BssECI	CCNNGG	3 cut(s)	609, 817, 1503
BssMI	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
BssNAI	GTATAC	1 cut(s)	1873
BssT1I	CCWWGG	3 cut(s)	609, 817, 1503
Bst1107I	GTATAC	1 cut(s)	1873
Bst2UI	CCWGG	1 cut(s)	1360
Bst4CI	ACNGT	6 cut(s)	378, 831, 1292, 1344, 1381, 1877
Bst6I	CTCTTC	3 cut(s)	211, 1418, 1973
BstAFI	CTTAAG	1 cut(s)	2077
BstBI	TTCGAA	2 cut(s)	1133, 1148
BstC8I	GCNNGC	5 cut(s)	1239, 1605, 1650, 1673, 1934
BstEII	GGTNACC	1 cut(s)	740
BstF5I	GGATG	4 cut(s)	209, 268, 1016, 2090
BstKTI	GATC	6 cut(s)	946, 985, 1246, 1801, 1959, 2011
BstMAI	GTCTC	2 cut(s)	629, 2092
BstMBI	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
BstMWI	GCNNNNNNNGC	4 cut(s)	718, 1742, 1850, 2035
BstNI	CCWGG	1 cut(s)	1360
BstPAI	GACNNNNGTC	1 cut(s)	621
BstPI	GGTNACC	1 cut(s)	740
BstSCI	CCNGG	2 cut(s)	1061, 1358
BstSFI	CTRYAG	1 cut(s)	1475
BstV1I	GCAGC	4 cut(s)	164, 660, 1344, 2125
BstXI	CCANNNNNNTGG	2 cut(s)	818, 1004
BstZ17I	GTATAC	1 cut(s)	1873
Bsu36I	CCTNAGG	2 cut(s)	657, 2091
BsuI	GTATCC	1 cut(s)	861
BsuRI	GGCC	6 cut(s)	432, 721, 974, 1080, 1839, 1918
BtsCI	GGATG	4 cut(s)	209, 268, 1016, 2090
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	5 cut(s)	107, 374, 865, 1187, 1322
BveI	ACCTGC	2 cut(s)	92, 179
Cac8I	GCNNGC	5 cut(s)	1239, 1605, 1650, 1673, 1934
CaiI	CAGNNNCTG	2 cut(s)	79, 547
Cfr13I	GGNCC	5 cut(s)	431, 616, 719, 935, 1079
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
CspCI	CAANNNNNGTGG	2 cut(s)	1057, 1092
CviAII	CATG	4 cut(s)	121, 1213, 1668, 1787
CviQI	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
DpnI	GATC	6 cut(s)	945, 984, 1245, 1800, 1958, 2010
DpnII	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
DraI	TTTAAA	2 cut(s)	396, 1732
EaeI	YGGCCR	1 cut(s)	1837
Eam1104I	CTCTTC	3 cut(s)	211, 1418, 1973
EarI	CTCTTC	3 cut(s)	211, 1418, 1973
Ecl136II	GAGCTC	2 cut(s)	69, 1946
Eco130I	CCWWGG	3 cut(s)	609, 817, 1503
Eco147I	AGGCCT	1 cut(s)	1918
Eco24I	GRGCYC	4 cut(s)	71, 331, 1677, 1948
Eco31I	GGTCTC	1 cut(s)	2092
Eco32I	GATATC	3 cut(s)	478, 769, 1453
Eco47I	GGWCC	2 cut(s)	616, 935
Eco53kI	GAGCTC	2 cut(s)	69, 1946
Eco57I	CTGAAG	3 cut(s)	524, 569, 2019
Eco81I	CCTNAGG	2 cut(s)	657, 2091
Eco88I	CYCGRG	2 cut(s)	1456, 1947
Eco91I	GGTNACC	1 cut(s)	740
EcoICRI	GAGCTC	2 cut(s)	69, 1946
EcoO109I	RGGNCCY	1 cut(s)	616
EcoO65I	GGTNACC	1 cut(s)	740
EcoRII	CCWGG	1 cut(s)	1358
EcoRV	GATATC	3 cut(s)	478, 769, 1453
EcoT14I	CCWWGG	3 cut(s)	609, 817, 1503
EcoT38I	GRGCYC	4 cut(s)	71, 331, 1677, 1948
ErhI	CCWWGG	3 cut(s)	609, 817, 1503
FaeI	CATG	4 cut(s)	124, 1216, 1671, 1790
FaqI	GGGAC	1 cut(s)	1822
FatI	CATG	4 cut(s)	120, 1212, 1667, 1786
FblI	GTMKAC	1 cut(s)	1872
Fnu4HI	GCNGC	6 cut(s)	178, 674, 722, 1333, 1638, 2114
FokI	GGATG	4 cut(s)	196, 275, 1003, 2097
FriOI	GRGCYC	4 cut(s)	71, 331, 1677, 1948
Fsp4HI	GCNGC	6 cut(s)	178, 674, 722, 1333, 1638, 2114
FspBI	CTAG	4 cut(s)	534, 986, 2117, 2152
GluI	GCNGC	6 cut(s)	178, 674, 722, 1333, 1638, 2114
GsaI	CCCAGC	1 cut(s)	1008
GsuI	CTGGAG	2 cut(s)	131, 1123
HaeIII	GGCC	6 cut(s)	432, 721, 974, 1080, 1839, 1918
HapII	CCGG	1 cut(s)	1063
HgaI	GACGC	1 cut(s)	1609
Hin1II	CATG	4 cut(s)	124, 1216, 1671, 1790
HindIII	AAGCTT	2 cut(s)	710, 1462
HinfI	GANTC	6 cut(s)	230, 289, 299, 1150, 1189, 1627
HpaII	CCGG	1 cut(s)	1063
HphI	GGTGA	4 cut(s)	158, 1201, 1877, 2107
Hpy166II	GTNNAC	3 cut(s)	562, 653, 1873
Hpy188I	TCNGA	6 cut(s)	60, 75, 93, 298, 689, 1974
Hpy8I	GTNNAC	3 cut(s)	562, 653, 1873
Hpy99I	CGWCG	1 cut(s)	1603
HpyAV	CCTTC	7 cut(s)	468, 885, 1175, 1264, 1367, 1527, 2112
HpyCH4III	ACNGT	6 cut(s)	378, 831, 1292, 1344, 1381, 1877
HpyF10VI	GCNNNNNNNGC	4 cut(s)	718, 1742, 1850, 2035
Hsp92II	CATG	4 cut(s)	124, 1216, 1671, 1790
Kzo9I	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
LmnI	GCTCC	5 cut(s)	1587, 1770, 1897, 1943, 2041
Lsp1109I	GCAGC	4 cut(s)	164, 660, 1344, 2125
LweI	GCATC	3 cut(s)	525, 1669, 2075
MaeI	CTAG	4 cut(s)	534, 986, 2117, 2152
MaeIII	GTNAC	2 cut(s)	740, 1789
MalI	GATC	6 cut(s)	945, 984, 1245, 1800, 1958, 2010
MboI	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
MboII	GAAGA	5 cut(s)	198, 834, 1016, 1405, 1990
MfeI	CAATTG	2 cut(s)	383, 939
MhlI	GDGCHC	4 cut(s)	71, 331, 1677, 1948
MlsI	TGGCCA	1 cut(s)	1839
MluNI	TGGCCA	1 cut(s)	1839
MlyI	GAGTC	1 cut(s)	1621
MmeI	TCCRAC	2 cut(s)	240, 1271
Mox20I	TGGCCA	1 cut(s)	1839
MroXI	GAANNNNTTC	2 cut(s)	922, 1274
MscI	TGGCCA	1 cut(s)	1839
MseI	TTAA	8 cut(s)	354, 395, 450, 750, 756, 909, 1731, 2078
Msp20I	TGGCCA	1 cut(s)	1839
MspA1I	CMGCKG	2 cut(s)	673, 724
MspCI	CTTAAG	1 cut(s)	2077
MspI	CCGG	1 cut(s)	1063
MspR9I	CCNGG	2 cut(s)	1063, 1360
MunI	CAATTG	2 cut(s)	383, 939
MvaI	CCWGG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	4 cut(s)	718, 1742, 1850, 2035
NciI	CCSGG	1 cut(s)	1063
NdeII	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
NlaIII	CATG	4 cut(s)	124, 1216, 1671, 1790
NlaIV	GGNNCC	4 cut(s)	433, 936, 1515, 1766
NspV	TTCGAA	2 cut(s)	1133, 1148
PceI	AGGCCT	1 cut(s)	1918
PdmI	GAANNNNTTC	2 cut(s)	922, 1274
PfeI	GAWTC	5 cut(s)	230, 289, 299, 1150, 1189
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	6 cut(s)	179, 675, 723, 1334, 1639, 2115
PleI	GAGTC	1 cut(s)	1621
PpsI	GAGTC	1 cut(s)	1621
PpuMI	RGGWCCY	1 cut(s)	616
PshAI	GACNNNNGTC	1 cut(s)	621
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	2 cut(s)	71, 1948
Psp5II	RGGWCCY	1 cut(s)	616
Psp6I	CCWGG	1 cut(s)	1358
PspEI	GGTNACC	1 cut(s)	740
PspFI	CCCAGC	1 cut(s)	1004
PspGI	CCWGG	1 cut(s)	1358
PspN4I	GGNNCC	4 cut(s)	433, 936, 1515, 1766
PspPI	GGNCC	5 cut(s)	431, 616, 719, 935, 1079
PspPPI	RGGWCCY	1 cut(s)	616
PstNI	CAGNNNCTG	2 cut(s)	79, 547
PvuII	CAGCTG	1 cut(s)	673
RsaI	GTAC	6 cut(s)	401, 546, 577, 654, 1378, 1574
RsaNI	GTAC	6 cut(s)	400, 545, 576, 653, 1377, 1573
SacI	GAGCTC	2 cut(s)	71, 1948
SaqAI	TTAA	8 cut(s)	354, 395, 450, 750, 756, 909, 1731, 2078
SatI	GCNGC	6 cut(s)	178, 674, 722, 1333, 1638, 2114
Sau3AI	GATC	6 cut(s)	943, 982, 1243, 1798, 1956, 2008
Sau96I	GGNCC	5 cut(s)	431, 616, 719, 935, 1079
ScaI	AGTACT	1 cut(s)	401
SchI	GAGTC	1 cut(s)	1621
ScrFI	CCNGG	2 cut(s)	1063, 1360
SduI	GDGCHC	4 cut(s)	71, 331, 1677, 1948
SfaNI	GCATC	3 cut(s)	525, 1669, 2075
SfcI	CTRYAG	1 cut(s)	1475
SfuI	TTCGAA	2 cut(s)	1133, 1148
SinI	GGWCC	2 cut(s)	616, 935
SmlI	CTYRAG	4 cut(s)	409, 1072, 1629, 2077
SmoI	CTYRAG	4 cut(s)	409, 1072, 1629, 2077
SseBI	AGGCCT	1 cut(s)	1918
SsiI	CCGC	4 cut(s)	126, 722, 1637, 2082
SspI	AATATT	1 cut(s)	1711
SspMI	CTAG	4 cut(s)	534, 986, 2117, 2152
SstI	GAGCTC	2 cut(s)	71, 1948
StuI	AGGCCT	1 cut(s)	1918
StyD4I	CCNGG	2 cut(s)	1061, 1358
StyI	CCWWGG	3 cut(s)	609, 817, 1503
TaaI	ACNGT	6 cut(s)	378, 831, 1292, 1344, 1381, 1877
TaqI	TCGA	4 cut(s)	269, 1133, 1148, 2130
TatI	WGTACW	2 cut(s)	399, 1572
TauI	GCSGC	2 cut(s)	724, 1640
TfiI	GAWTC	5 cut(s)	230, 289, 299, 1150, 1189
Tru1I	TTAA	8 cut(s)	354, 395, 450, 750, 756, 909, 1731, 2078
Tru9I	TTAA	8 cut(s)	354, 395, 450, 750, 756, 909, 1731, 2078
TscAI	CASTG	5 cut(s)	114, 381, 865, 1187, 1322
TseI	GCWGC	4 cut(s)	177, 673, 1332, 2113
TspRI	CASTG	5 cut(s)	114, 381, 865, 1187, 1322
Vha464I	CTTAAG	1 cut(s)	2077
VpaK11BI	GGWCC	2 cut(s)	616, 935
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	5 cut(s)	160, 310, 391, 1170, 1726
XmiI	GTMKAC	1 cut(s)	1872
XmnI	GAANNNNTTC	2 cut(s)	922, 1274
XspI	CTAG	4 cut(s)	534, 986, 2117, 2152
ZrmI	AGTACT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.