Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000784

Physical Location & Seq

Genomic Coordinates Forward (+)

33471116 .. 33473597

Gene Structure 2482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36601.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGAGGGATCAAGATTTCTGGTGTGTTATCTTTGTAATTGGGTTCTGCTTCCAGCCACTAGTTTTGAGCTCTCAGAACCTGACCTGCAATCTCAATGATTTGAATGCATTGGAGGGTTTCATGGGTGGTCTGCAGAGTACCCTAGGTAATTGGGGCAGGAATTTCTCTGATGATTGCTGTAAATGGGCAGGTATTACTTGCAACTCTTCCTTCTCTCTTGGATTGGATGATTCTGTTGATAGTTATAGAGTCGTTGAGTTGGATCTTTCGAGTAGGAGACTATATGGGAACCTTTCTGAATCTTTGGGGAATTTGGTACAACTTAGAGCCCTCAATCTTTCTCACAATTTCCTTAAAAACTCACTTCCTGCTTCACTTTTCCAATTGCCAAACTTAGAGTACTTAGACTTGAGTTCTAATGACTTTTCTGGTCCCATTCCAGTCGATTTCAATTTACCTTCGATCCTGTCACTTGACATCTCTCAAAATTTATTGAATGGTTCTATTCCACAAAGCATTTGTGTAAATTCTACTCGGCTTCAGGTTCTGAAGTTGGCTGTGAACTACTTGTCTGGTAGTCTTCCAAAAAGTCTTGCCAATTGCAGTTCCTTGGAGGCCATCCGTCTCAGCACAAACTCTCTCTCTGGTGGTGTACCTGAAGGTATATATCAGCTGCAGAAACTAACCAGATTGACCATTCAACGTAACAAGCTTACCGGGCCGCTGAGCAAAGAAGTTGGTAACCTGATCAACCTTACTCGGTTGGATATATCAACTAATTGGTTTTCAGGGACCATTCCGGACGTCTTCCACAGCCTCCGGAGGTTACAGTTTTTTGTTGCTCATTCCAATAATTTCAGCGGTCCGATACCCCATTCCTTGTCAAGTTCTCCAACCATCTCGTTTCTGAATGTGAGAAACAACTCATTGGACGGTCCAATCGATCTAAATTGTTCAGCAATGACAAGTTTGGTCTCTCTTGATCTAGGTTCAAATTGGTTTGATGGGGTTATTCCATCTAATCTTCCCACTTGCCGGCGTTTGAATAATATAAATCTTGCCAGGAACAACATGAGTGGCCAAATTCCTGACAGCTTCAAGGACTTTCATACTCTCAGTTACTTCTCACTTTCAAATGCCAGCTATTCTAATCTATCATCTGCCCTTCATATCTTACAGCAGTGTCAGAATCTAACCACTTTGATTCTCACCATGAACTTCTATGATGAAGAATTGCCAGCTGATCCAAACCTTCATTTTCCAAGGTTGAAGGTATTTATTCTTGCAAATTCTCGGCTCACGGGTTCGATACCCCAATGGTTGAGTAAGAGCAGCAGATTGCAGTTATTGGATATATCCTGGAACTGCTTGGAGGGTACAGTTCCAGCTTGGTTTGGCAATTTTACTAATCTCTTCTACTTGGACATATCAAACAATACTTTTACTGGGGAGATCCCGAGAAGCTTAACTGGACTACAGAGCCTCATTGATGGGAATTTTTCCTCAGTTCCGGAACCTTCCCCCGATTTTCCTCTTTTCCAGAAGAAGAATGTAAGTGCAAGGGGATTGCAGTACAATCAAGTTTGGAGTTTTCCACCGACGCTGGAACTTAGCAACAATAATTTCAGTGGACAGATCTGGCCAGAATTTGGGAACCTGAAATCCCTTCATGTATTGGATCTGAAGTGCAACAATTTATCTGGACCAATTCCAAGTTCTTTTTCTAATATGGTCAGCTTAGAGACTTTGGATTTGTCTCATAACAAGCTTTCAGGGATAATACCCAGTTCATTGATTCGTCTCAGTTTTTTGTCCAAGTTCAGTGTTGCAGACAATCAATTAGAGGGGGAGATCCCTAATGGAGGTCAGTTTGGGACTTTCCCAAATTCAAGCTTTGAAGGGAACAATCTTTGTAGTGACCATGCTCCTCCATGTCCATCCAAGGTTCATACTTATCTCGATCAAACCAGAAAATCAAGAATGAATGTATTTGGAGTAGAATATAGAGGAGTTGTCATTGGAATAGCTGTGGGATTTGTATTTGGAGTATCTTGCTTTATAGTAACAGATAGATATGTGTGGACTTGGCATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009975 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0031347 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052652 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0072521 GO:0072522 GO:0080134 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

699

Amino Acids

77.3

Weight (kDa)

5.96

Isoelectric Point (pI)

32.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 68	8.5e-06	Leucine rich repeat N-terminal domain
LRR_8	PF13855	85 - 142	5.4e-07	Leucine rich repeat
LRR_4	PF12799	107 - 143	6.2e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	152 - 311	1.9e-06	Leucine-rich repeat region
LRR_8	PF13855	179 - 238	8.6e-06	Leucine rich repeat
LRR_8	PF13855	534 - 590	1.8e-08	Leucine rich repeat
LRR_8	PF13855	555 - 614	3e-09	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02220
fragaria_vesca	FvH4_4g36380 FvH4_4g36410 FvH4_4g36411 FvH4_4g36420 FvH4_4g36420 FvH4_4g36601 FvH4_4g36601 FvH4_4g36601
malus_domestica	MD13G1009400.v1.1 MD13G1088300.v1.1 MD16G1007400.v1.1 MD16G1007500.v1.1 MD16G1007600.v1.1
prunus_persica	Prupe.1G343200_v2.0.a1 Prupe.1G343300_v2.0.a1
pyrus_communis	pycom13g00800 pycom16g00700 pycom16g00710 pycom16g00740 pycom16g00750
rosa_chinensis	RchiOBHm_Chr4g0420391 RchiOBHm_Chr4g0446131 RchiOBHm_Chr4g0446161 RchiOBHm_Chr4g0446181 RchiOBHm_Chr4g0446501
rosa_laevigata	RLG00000005654 RLG00000005685 RLG00000005686 RLG00000005687 RLG00000005689 RLG00000007768
rosa_multiflora	Rmu_co8048352.1_g000001 Rmu_sc0009254.1_g000002 Rmu_sc0009254.1_g000003 Rmu_sc0012061.1_g000004 Rmu_sc0024859.1_g000001 Rmu_sc0041209.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386530 Rroxscaffold_5G00386560 Rroxscaffold_5G00386570
rosa_rugosa	Rorug04G0163600 Rorug04G0368100 Rorug04G0368200 Rorug04G0368300 Rorug04G0372000
rosa_samantha	Rh4AG225100 Rh4AG429800 Rh4AG430000 Rh4AG430200 Rh4AG433600 Rh4BG439200 Rh4BG439500 Rh4BG439700 Rh4BG442700 Rh4CG239400 Rh4CG456500 Rh4CG456800 Rh4CG456900 Rh4CG460100 Rh4DG223500 Rh4DG437700 Rh4DG437900 Rh4DG438100 Rh4DG441400
rosa_wichuraiana	Rw4G019430 Rw4G036720 Rw4G036730 Rw4G036740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	807
Acc36I	ACCTGC	2 cut(s)	92, 179
AccB7I	CCANNNNNTGG	1 cut(s)	1649
AccIII	TCCGGA	3 cut(s)	799, 819, 1510
AciI	CCGC	2 cut(s)	722, 861
AclWI	GGATC	7 cut(s)	15, 270, 457, 1238, 1447, 1686, 1846
AcoI	YGGCCR	2 cut(s)	1078, 1640
AcsI	RAATTY	9 cut(s)	160, 310, 487, 526, 1083, 1288, 1495, 1646, 1885
AcuI	CTGAAG	4 cut(s)	524, 569, 678, 1703
AcyI	GRCGYC	1 cut(s)	804
AfaI	GTAC	6 cut(s)	139, 318, 401, 654, 1378, 1574
AfiI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
AhlI	ACTAGT	1 cut(s)	58
AjnI	CCWGG	2 cut(s)	1061, 1358
AjuI	GAANNNNNNNTTGG	4 cut(s)	1699, 1705, 1731, 1737
AloI	GAACNNNNNNTCC	2 cut(s)	1646, 1678
Alw21I	GWGCWC	1 cut(s)	71
Alw26I	GTCTC	6 cut(s)	271, 629, 979, 1736, 1761, 1805
AlwI	GGATC	7 cut(s)	15, 270, 457, 1238, 1447, 1686, 1846
AlwNI	CAGNNNCTG	2 cut(s)	79, 547
Ama87I	CYCGRG	1 cut(s)	1456
Aor13HI	TCCGGA	3 cut(s)	799, 819, 1510
AoxI	GGCC	4 cut(s)	615, 719, 1078, 1640
ApeKI	GCWGC	2 cut(s)	673, 1332
ApoI	RAATTY	9 cut(s)	160, 310, 487, 526, 1083, 1288, 1495, 1646, 1885
ArsI	GACNNNNNNTTYG	2 cut(s)	1735, 1767
AspA2I	CCTAGG	1 cut(s)	142
AspS9I	GGNCC	6 cut(s)	431, 719, 792, 863, 935, 1703
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	1 cut(s)	1201
AvaI	CYCGRG	1 cut(s)	1456
AvaII	GGWCC	5 cut(s)	431, 792, 863, 935, 1703
AvrII	CCTAGG	1 cut(s)	142
BalI	TGGCCA	2 cut(s)	1080, 1642
BanII	GRGCYC	2 cut(s)	71, 331
BbsI	GAAGAC	2 cut(s)	572, 799
Bbv12I	GWGCWC	1 cut(s)	71
BbvI	GCAGC	2 cut(s)	660, 1344
BccI	CCATC	6 cut(s)	626, 905, 998, 1024, 1484, 1945
BciT130I	CCWGG	2 cut(s)	1063, 1360
BclI	TGATCA	1 cut(s)	747
BcnI	CCSGG	1 cut(s)	718
BcoDI	GTCTC	6 cut(s)	271, 629, 979, 1736, 1761, 1805
BcuI	ACTAGT	1 cut(s)	58
BfaI	CTAG	3 cut(s)	59, 143, 986
BfmI	CTRYAG	3 cut(s)	131, 674, 1475
BfuAI	ACCTGC	2 cut(s)	92, 179
BglII	AGATCT	1 cut(s)	1635
BisI	GCNGC	3 cut(s)	674, 722, 1333
BlnI	CCTAGG	1 cut(s)	142
BlpI	GCTNAGC	1 cut(s)	725
BlsI	GCNGC	3 cut(s)	675, 723, 1334
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	3 cut(s)	718, 1063, 1360
Bme18I	GGWCC	5 cut(s)	431, 792, 863, 935, 1703
BmeT110I	CYCGRG	1 cut(s)	1456
BmgT120I	GGNCC	6 cut(s)	431, 719, 792, 863, 935, 1703
BmiI	GGNNCC	5 cut(s)	290, 433, 793, 1515, 1655
BmrFI	CCNGG	3 cut(s)	718, 1063, 1360
BmrI	ACTGGG	2 cut(s)	1455, 1779
BmuI	ACTGGG	2 cut(s)	1455, 1779
BpiI	GAAGAC	2 cut(s)	572, 799
Bpu1102I	GCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	1 cut(s)	430
BpuMI	CCSGG	1 cut(s)	718
Bsa29I	ATCGAT	1 cut(s)	942
BsaHI	GRCGYC	1 cut(s)	804
BsaI	GGTCTC	1 cut(s)	979
BsaJI	CCNNGG	4 cut(s)	142, 609, 1262, 1941
BsaWI	WCCGGW	3 cut(s)	799, 819, 1510
Bsc4I	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
Bse118I	RCCGGY	1 cut(s)	1035
Bse1I	ACTGG	4 cut(s)	440, 1450, 1474, 1785
Bse3DI	GCAATG	1 cut(s)	966
BseAI	TCCGGA	3 cut(s)	799, 819, 1510
BseBI	CCWGG	2 cut(s)	1063, 1360
BseCI	ATCGAT	1 cut(s)	942
BseDI	CCNNGG	4 cut(s)	142, 609, 1262, 1941
BseGI	GGATG	3 cut(s)	232, 618, 1937
BseLI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
BseMI	GCAATG	1 cut(s)	966
BseMII	CTCAG	6 cut(s)	86, 640, 716, 1129, 1518, 1816
BseNI	ACTGG	4 cut(s)	440, 1450, 1474, 1785
BseRI	GAGGAG	2 cut(s)	1917, 2022
BseXI	GCAGC	2 cut(s)	660, 1344
BshFI	GGCC	4 cut(s)	617, 721, 1080, 1642
BshVI	ATCGAT	1 cut(s)	942
BsiHKAI	GWGCWC	1 cut(s)	71
BsiHKCI	CYCGRG	1 cut(s)	1456
BsiSI	CCGG	5 cut(s)	717, 800, 820, 1036, 1511
BslFI	GGGAC	3 cut(s)	417, 805, 1888
BslI	CCNNNNNNNGG	3 cut(s)	1035, 1649, 1862
BsmAI	GTCTC	6 cut(s)	271, 629, 979, 1736, 1761, 1805
BsmBI	CGTCTC	2 cut(s)	629, 1805
BsmFI	GGGAC	3 cut(s)	417, 805, 1888
BsmI	GAATGC	1 cut(s)	109
BsnI	GGCC	4 cut(s)	617, 721, 1080, 1642
Bso31I	GGTCTC	1 cut(s)	979
BsoBI	CYCGRG	1 cut(s)	1456
Bsp1286I	GDGCHC	2 cut(s)	71, 331
Bsp13I	TCCGGA	3 cut(s)	799, 819, 1510
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	2 cut(s)	722, 861
BspANI	GGCC	4 cut(s)	617, 721, 1080, 1642
BspCNI	CTCAG	6 cut(s)	85, 639, 717, 1128, 1517, 1815
BspDI	ATCGAT	1 cut(s)	942
BspEI	TCCGGA	3 cut(s)	799, 819, 1510
BspLI	GGNNCC	5 cut(s)	290, 433, 793, 1515, 1655
BspMAI	CTGCAG	2 cut(s)	135, 678
BspMI	ACCTGC	2 cut(s)	92, 179
BspPI	GGATC	7 cut(s)	15, 270, 457, 1238, 1447, 1686, 1846
BspTNI	GGTCTC	1 cut(s)	979
BsrDI	GCAATG	1 cut(s)	966
BsrFI	RCCGGY	1 cut(s)	1035
BsrI	ACTGG	4 cut(s)	440, 1450, 1474, 1785
BssAI	RCCGGY	1 cut(s)	1035
BssECI	CCNNGG	4 cut(s)	142, 609, 1262, 1941
BssNI	GRCGYC	1 cut(s)	804
BssT1I	CCWWGG	4 cut(s)	142, 609, 1262, 1941
Bst2UI	CCWGG	2 cut(s)	1063, 1360
Bst4CI	ACNGT	3 cut(s)	831, 935, 1381
Bst6I	CTCTTC	2 cut(s)	211, 1418
BstACI	GRCGYC	1 cut(s)	804
BstC8I	GCNNGC	3 cut(s)	1037, 1141, 1239
BstEII	GGTNACC	1 cut(s)	740
BstENI	CCTNNNNNAGG	1 cut(s)	1860
BstF5I	GGATG	3 cut(s)	232, 618, 1937
BstMAI	GTCTC	6 cut(s)	271, 629, 979, 1736, 1761, 1805
BstMWI	GCNNNNNNNGC	1 cut(s)	718
BstNI	CCWGG	2 cut(s)	1063, 1360
BstPI	GGTNACC	1 cut(s)	740
BstSCI	CCNGG	3 cut(s)	716, 1061, 1358
BstSFI	CTRYAG	3 cut(s)	131, 674, 1475
BstV1I	GCAGC	2 cut(s)	660, 1344
BstV2I	GAAGAC	2 cut(s)	572, 799
BstX2I	RGATCY	5 cut(s)	262, 1452, 1635, 1678, 1851
BstYI	RGATCY	5 cut(s)	262, 1452, 1635, 1678, 1851
Bsu15I	ATCGAT	1 cut(s)	942
BsuRI	GGCC	4 cut(s)	617, 721, 1080, 1642
BsuTUI	ATCGAT	1 cut(s)	942
BtsCI	GGATG	3 cut(s)	232, 618, 1937
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	3 cut(s)	1187, 1633, 1828
BveI	ACCTGC	2 cut(s)	92, 179
Cac8I	GCNNGC	3 cut(s)	1037, 1141, 1239
CaiI	CAGNNNCTG	2 cut(s)	79, 547
Cfr10I	RCCGGY	1 cut(s)	1035
Cfr13I	GGNCC	6 cut(s)	431, 719, 792, 863, 935, 1703
ClaI	ATCGAT	1 cut(s)	942
CpoI	CGGWCCG	1 cut(s)	863
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	6 cut(s)	138, 317, 400, 653, 1377, 1573
CspCI	CAANNNNNGTGG	4 cut(s)	45, 80, 1057, 1092
CspI	CGGWCCG	1 cut(s)	863
CviAII	CATG	6 cut(s)	121, 1072, 1213, 1670, 1922, 1932
CviQI	GTAC	6 cut(s)	138, 317, 400, 653, 1377, 1573
EaeI	YGGCCR	2 cut(s)	1078, 1640
Eam1104I	CTCTTC	2 cut(s)	211, 1418
EarI	CTCTTC	2 cut(s)	211, 1418
Ecl136II	GAGCTC	1 cut(s)	69
Eco130I	CCWWGG	4 cut(s)	142, 609, 1262, 1941
Eco24I	GRGCYC	2 cut(s)	71, 331
Eco31I	GGTCTC	1 cut(s)	979
Eco47I	GGWCC	5 cut(s)	431, 792, 863, 935, 1703
Eco53kI	GAGCTC	1 cut(s)	69
Eco57I	CTGAAG	4 cut(s)	524, 569, 678, 1703
Eco88I	CYCGRG	1 cut(s)	1456
Eco91I	GGTNACC	1 cut(s)	740
EcoICRI	GAGCTC	1 cut(s)	69
EcoNI	CCTNNNNNAGG	1 cut(s)	1860
EcoO65I	GGTNACC	1 cut(s)	740
EcoRII	CCWGG	2 cut(s)	1061, 1358
EcoT14I	CCWWGG	4 cut(s)	142, 609, 1262, 1941
EcoT22I	ATGCAT	1 cut(s)	109
EcoT38I	GRGCYC	2 cut(s)	71, 331
ErhI	CCWWGG	4 cut(s)	142, 609, 1262, 1941
Esp3I	CGTCTC	2 cut(s)	629, 1805
FaeI	CATG	6 cut(s)	124, 1075, 1216, 1673, 1925, 1935
FaqI	GGGAC	3 cut(s)	417, 805, 1888
FatI	CATG	6 cut(s)	120, 1071, 1212, 1669, 1921, 1931
FbaI	TGATCA	1 cut(s)	747
Fnu4HI	GCNGC	3 cut(s)	674, 722, 1333
FokI	GGATG	3 cut(s)	239, 605, 1924
FriOI	GRGCYC	2 cut(s)	71, 331
Fsp4HI	GCNGC	3 cut(s)	674, 722, 1333
FspBI	CTAG	3 cut(s)	59, 143, 986
GluI	GCNGC	3 cut(s)	674, 722, 1333
HaeIII	GGCC	4 cut(s)	617, 721, 1080, 1642
HapII	CCGG	5 cut(s)	717, 800, 820, 1036, 1511
HgaI	GACGC	1 cut(s)	1609
Hin1I	GRCGYC	1 cut(s)	804
Hin1II	CATG	6 cut(s)	124, 1075, 1216, 1673, 1925, 1935
HindIII	AAGCTT	4 cut(s)	710, 1462, 1766, 1891
HinfI	GANTC	6 cut(s)	230, 249, 299, 1189, 1204, 1795
HpaII	CCGG	5 cut(s)	717, 800, 820, 1036, 1511
HphI	GGTGA	1 cut(s)	1201
Hpy166II	GTNNAC	4 cut(s)	562, 653, 1631, 2082
Hpy188I	TCNGA	8 cut(s)	75, 169, 298, 549, 867, 909, 1188, 1683
Hpy8I	GTNNAC	4 cut(s)	562, 653, 1631, 2082
Hpy99I	CGWCG	1 cut(s)	1603
HpyAV	CCTTC	9 cut(s)	220, 468, 653, 1175, 1262, 1264, 1527, 1676, 1892
HpyCH4III	ACNGT	3 cut(s)	831, 935, 1381
HpyCH4IV	ACGT	2 cut(s)	703, 804
HpyF10VI	GCNNNNNNNGC	1 cut(s)	718
HpySE526I	ACGT	2 cut(s)	703, 804
Hsp92I	GRCGYC	1 cut(s)	804
Hsp92II	CATG	6 cut(s)	124, 1075, 1216, 1673, 1925, 1935
Kpn2I	TCCGGA	3 cut(s)	799, 819, 1510
KroI	GCCGGC	1 cut(s)	1035
KroNI	GCCGGC	1 cut(s)	1037
Ksp22I	TGATCA	1 cut(s)	747
LmnI	GCTCC	1 cut(s)	1930
Lsp1109I	GCAGC	2 cut(s)	660, 1344
MaeI	CTAG	3 cut(s)	59, 143, 986
MaeII	ACGT	2 cut(s)	703, 804
MaeIII	GTNAC	7 cut(s)	468, 704, 740, 825, 1118, 1916, 2062
MboII	GAAGA	8 cut(s)	198, 572, 799, 1016, 1241, 1405, 1555, 1558
MfeI	CAATTG	2 cut(s)	383, 598
MflI	RGATCY	5 cut(s)	262, 1452, 1635, 1678, 1851
MhlI	GDGCHC	2 cut(s)	71, 331
MlsI	TGGCCA	2 cut(s)	1080, 1642
MluNI	TGGCCA	2 cut(s)	1080, 1642
MlyI	GAGTC	1 cut(s)	258
MmeI	TCCRAC	3 cut(s)	240, 744, 917
Mox20I	TGGCCA	2 cut(s)	1080, 1642
Mph1103I	ATGCAT	1 cut(s)	109
MroI	TCCGGA	3 cut(s)	799, 819, 1510
MroNI	GCCGGC	1 cut(s)	1035
MscI	TGGCCA	2 cut(s)	1080, 1642
MseI	TTAA	2 cut(s)	354, 1466
Msp20I	TGGCCA	2 cut(s)	1080, 1642
MspA1I	CMGCKG	4 cut(s)	673, 724, 861, 1241
MspI	CCGG	5 cut(s)	717, 800, 820, 1036, 1511
MspR9I	CCNGG	3 cut(s)	718, 1063, 1360
MunI	CAATTG	2 cut(s)	383, 598
Mva1269I	GAATGC	1 cut(s)	109
MvaI	CCWGG	2 cut(s)	1063, 1360
MwoI	GCNNNNNNNGC	1 cut(s)	718
NaeI	GCCGGC	1 cut(s)	1037
NciI	CCSGG	1 cut(s)	718
NgoMIV	GCCGGC	1 cut(s)	1035
NlaIII	CATG	6 cut(s)	124, 1075, 1216, 1673, 1925, 1935
NlaIV	GGNNCC	5 cut(s)	290, 433, 793, 1515, 1655
NmeAIII	GCCGAG	2 cut(s)	514, 1273
NmuCI	GTSAC	2 cut(s)	468, 1916
NsiI	ATGCAT	1 cut(s)	109
PcsI	WCGNNNNNNNCGW	1 cut(s)	939
PctI	GAATGC	1 cut(s)	109
PdiI	GCCGGC	1 cut(s)	1037
PfeI	GAWTC	5 cut(s)	230, 299, 1189, 1204, 1795
PflMI	CCANNNNNTGG	1 cut(s)	1649
PfoI	TCCNGGA	1 cut(s)	1358
PkrI	GCNGC	3 cut(s)	675, 723, 1334
PleI	GAGTC	1 cut(s)	257
PpsI	GAGTC	1 cut(s)	257
Psp124BI	GAGCTC	1 cut(s)	71
Psp6I	CCWGG	2 cut(s)	1061, 1358
PspEI	GGTNACC	1 cut(s)	740
PspGI	CCWGG	2 cut(s)	1061, 1358
PspN4I	GGNNCC	5 cut(s)	290, 433, 793, 1515, 1655
PspPI	GGNCC	6 cut(s)	431, 719, 792, 863, 935, 1703
PstI	CTGCAG	2 cut(s)	135, 678
PstNI	CAGNNNCTG	2 cut(s)	79, 547
PsuI	RGATCY	5 cut(s)	262, 1452, 1635, 1678, 1851
PvuII	CAGCTG	2 cut(s)	673, 1241
RsaI	GTAC	6 cut(s)	139, 318, 401, 654, 1378, 1574
RsaNI	GTAC	6 cut(s)	138, 317, 400, 653, 1377, 1573
Rsr2I	CGGWCCG	1 cut(s)	863
RsrII	CGGWCCG	1 cut(s)	863
SacI	GAGCTC	1 cut(s)	71
SaqAI	TTAA	2 cut(s)	354, 1466
SatI	GCNGC	3 cut(s)	674, 722, 1333
Sau96I	GGNCC	6 cut(s)	431, 719, 792, 863, 935, 1703
ScaI	AGTACT	1 cut(s)	401
SchI	GAGTC	1 cut(s)	258
ScrFI	CCNGG	3 cut(s)	718, 1063, 1360
SduI	GDGCHC	2 cut(s)	71, 331
SfcI	CTRYAG	3 cut(s)	131, 674, 1475
SinI	GGWCC	5 cut(s)	431, 792, 863, 935, 1703
SmlI	CTYRAG	1 cut(s)	409
SmoI	CTYRAG	1 cut(s)	409
SpeI	ACTAGT	1 cut(s)	58
SsiI	CCGC	2 cut(s)	722, 861
SspMI	CTAG	3 cut(s)	59, 143, 986
SstI	GAGCTC	1 cut(s)	71
StyD4I	CCNGG	3 cut(s)	716, 1061, 1358
StyI	CCWWGG	4 cut(s)	142, 609, 1262, 1941
TaaI	ACNGT	3 cut(s)	831, 935, 1381
TaiI	ACGT	2 cut(s)	706, 807
TaqI	TCGA	6 cut(s)	269, 444, 461, 942, 1307, 1959
TatI	WGTACW	2 cut(s)	399, 1572
TauI	GCSGC	1 cut(s)	724
TfiI	GAWTC	5 cut(s)	230, 299, 1189, 1204, 1795
Tru1I	TTAA	2 cut(s)	354, 1466
Tru9I	TTAA	2 cut(s)	354, 1466
TscAI	CASTG	3 cut(s)	1187, 1633, 1828
TseFI	GTSAC	2 cut(s)	468, 1916
TseI	GCWGC	2 cut(s)	673, 1332
Tsp45I	GTSAC	2 cut(s)	468, 1916
TspGWI	ACGGA	1 cut(s)	611
TspRI	CASTG	3 cut(s)	1187, 1633, 1828
Van91I	CCANNNNNTGG	1 cut(s)	1649
VpaK11BI	GGWCC	5 cut(s)	431, 792, 863, 935, 1703
XagI	CCTNNNNNAGG	1 cut(s)	1860
XapI	RAATTY	9 cut(s)	160, 310, 487, 526, 1083, 1288, 1495, 1646, 1885
XmaJI	CCTAGG	1 cut(s)	142
XspI	CTAG	3 cut(s)	59, 143, 986
ZraI	GACGTC	1 cut(s)	805
ZrmI	AGTACT	1 cut(s)	401
Zsp2I	ATGCAT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.