Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

39513364 .. 39518917

Gene Structure 5554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g54060.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGCCTCCAGCGCCCTCTCTCTCTTCCCCTCCATTTTCCGACATGAACCAACCTTGTCTTCGCCATCACTATTCACGAGGTCCAATAAACTAACTCCGCTGGCCAGCACCTGGAGACTAGCCGTTTCCACAGACCACACTCCTGTCTTCACCACGTCCACGCCAACTGGTGCTTTCTCAGACAACACCAACAACAAGAACAAGGAAGACGAGAAAGCAAATGAGAAAAAGAACGGGGCTTTGGTGGAGGATGGTGATCAAGTGATGAGCGTAAACCAGTTCTTTGAGCAAGCCAAGGATCTTCTCAGATCGAACGACCAGTACAGCTCCGGAACTGTAAGTGGACCACCTCGGTGGTTCTCCCCTTTAGATTGCGGGACCCCCACCAACCATGATTCCCCTCTCCTTCTCTTTCTGCCTGGAATTGATGGCACCGGAGTTGGGCTTGTAAGGCATCACCAGAAACTTGGCAAACATTTTCAGGTCTCCTGCTTGCATATCCCTCCCAAGGATCGAACACCCTTTACAGACTTAGTGAAGCTGGTTGAGAGAACAATTCGGTCAGAGCATCATGCCTCGCCGGATCGTCCCATATATCTTGTTGGAGAATCTGTTGGAGCATGCCTTGCACTATCTGTGGCAGCGCTTAACCCGGATATCGACCTCGTTCTTATTCTAGCAAATCCAGCAACGTCCTTCAGCAGGTCACCACTTCAAGCTGTATTACCTTTACTACAGTTCATGCCTGACACTCCCTATCTTAGCCTTCCTCATGTACTAAGTACAATTACAGGTGCAATGATGGCTAGTCTGGAGAAGGGAGTTGGAGGACTTCCACTGCCAGAAACAATTGAAAAGCTATCACGGGATATTGTTGCACCATCAATATCTAACCTCTCCGTTCTTGCAGATATCTTACCCAGAGAAACACTTTTGTGGAAGCTGCAAATGATGAGTGCAGCTTCTTCATATACCAATTCACGCCTCCATGCTGTAAAAGCTCATACCGTGATGCTTTCCAGTGGGAGGGATCCATTGCTACCTAGTCAAGGGGAAGGTCAAAGACTCAAAGGGCTGCTTGCAACTTGTCAGTTCCGTACTTTTGAAGAATGCGGTCATTTCCTCTTCTTGGAGGATGCTTTTGATTTGCTAACTGTAATCAAGAATGTCGGTGTCTATCGTCGTTCAAAGGAGCGAGATTTTGTTACAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGATAAAAACAGATGGGTTAACATTCTCATGAGCCCAGTGATGCTCTCAACTTTAGTAGACGGGAAGATAGTGAGGGGGTTTGCCGGGATTCCTACAGAAGGTCCTGTGTTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTAACCCAATTGTTCGAACAATATAACGTCCATCTGCGAGGGATAGCTCATCCAATGATGTTTGATGGAAGTTTACCTGAGATAACATTATACGATGATTTCAGACTTATGGGTGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCTACAAAGTCTCATGCCCTCCTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTATTCTGGCCAGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATTGTACCTTTTGGTGCTGTTGGAGAAGACGATATTGGTGATATATTTCTTGATTATGAAGACCAGATGAAAATTCCTTTCCTCAGGAAATCTATAGAGGACATGACGGCTGAAGCTACAAATGTGAGGTCCACCGATGATGGGGAGATTGGAAACCAAGCTTTGCACTTGCCAGGAATTGCGCCAAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCGGGGAGGAAGCAGGAATTACGAGACAGGGAGACAGCTCATGAACTGTATTTAGAAGTGAAATCGGAGGTCGAGAAGTCCCTTGCTTATTTGCTGAAGAAAAGAGAAAGTGATCCGTACAGAAACCTGGCGGCTCGGTTACAATTCCAGGCCGTAAACGGGTTTACGTCTGAAGTTCCTTCATTTGACCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

708

Amino Acids

78.46

Weight (kDa)

6.39

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	11 - 214	1.3e-08	Serine aminopeptidase, S33
Abhydrolase_6	PF12697	12 - 218	6.2e-07	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	26 - 215	1.4e-07	alpha/beta hydrolase fold
DAGAT	PF03982	340 - 414	1.7e-08	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1902
Acc36I	ACCTGC	1 cut(s)	693
AccB1I	GGYRCC	1 cut(s)	431
AccB7I	CCANNNNNTGG	1 cut(s)	111
AccI	GTMKAC	1 cut(s)	1308
AccIII	TCCGGA	1 cut(s)	329
AciI	CCGC	5 cut(s)	98, 375, 1113, 1928, 2057
AclWI	GGATC	6 cut(s)	306, 519, 591, 1025, 1038, 2033
AcoI	YGGCCR	3 cut(s)	102, 1643, 1888
AcsI	RAATTY	4 cut(s)	1658, 1764, 1880, 1904
AcuI	CTGAAG	4 cut(s)	682, 1824, 2042, 2118
AfaI	GTAC	6 cut(s)	323, 777, 784, 1099, 1698, 2045
AfeI	AGCGCT	1 cut(s)	645
AflIII	ACRYGT	1 cut(s)	1377
AgsI	TTSAA	7 cut(s)	716, 854, 1106, 1188, 1394, 1552, 1922
AjiI	CACGTC	1 cut(s)	156
AjnI	CCWGG	7 cut(s)	110, 418, 1588, 1864, 1885, 2052, 2073
AjuI	GAANNNNNNNTTGG	6 cut(s)	43, 75, 224, 256, 1710, 1742
AleI	CACNNNNGTG	2 cut(s)	352, 934
Alw26I	GTCTC	6 cut(s)	109, 490, 1537, 1575, 1944, 1952
AlwI	GGATC	6 cut(s)	306, 519, 591, 1025, 1038, 2033
AlwNI	CAGNNNCTG	1 cut(s)	111
Ama87I	CYCGRG	1 cut(s)	1534
Aor13HI	TCCGGA	1 cut(s)	329
Aor51HI	AGCGCT	1 cut(s)	645
AoxI	GGCC	5 cut(s)	3, 102, 1643, 1888, 2076
ApeKI	GCWGC	5 cut(s)	641, 943, 959, 1075, 1673
ApoI	RAATTY	4 cut(s)	1658, 1764, 1880, 1904
ArsI	GACNNNNNNTTYG	2 cut(s)	1805, 1837
Asp700I	GAANNNNTTC	1 cut(s)	1398
AspLEI	GCGC	3 cut(s)	14, 646, 1876
AspS9I	GGNCC	5 cut(s)	81, 344, 378, 1352, 1821
AsuC2I	CCSGG	2 cut(s)	653, 1336
AsuHPI	GGTGA	7 cut(s)	142, 266, 449, 699, 1218, 1604, 1742
AsuII	TTCGAA	1 cut(s)	1422
AvaI	CYCGRG	1 cut(s)	1534
AvaII	GGWCC	5 cut(s)	81, 344, 378, 1352, 1821
AxyI	CCTNAGG	1 cut(s)	1775
BalI	TGGCCA	2 cut(s)	104, 1645
BamHI	GGATCC	1 cut(s)	1030
BanI	GGYRCC	1 cut(s)	431
BanII	GRGCYC	1 cut(s)	1286
BauI	CACGAG	1 cut(s)	76
BbsI	GAAGAC	5 cut(s)	51, 139, 213, 1725, 1758
BbvI	GCAGC	5 cut(s)	653, 930, 971, 1062, 1685
BceAI	ACGGC	3 cut(s)	107, 1815, 2063
BciT130I	CCWGG	7 cut(s)	112, 420, 1590, 1866, 1887, 2054, 2075
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	2 cut(s)	653, 1336
BcoDI	GTCTC	6 cut(s)	109, 490, 1537, 1575, 1944, 1952
BfaI	CTAG	5 cut(s)	119, 677, 807, 1044, 1677
BfmI	CTRYAG	3 cut(s)	734, 1344, 1785
BfoI	RGCGCY	2 cut(s)	15, 647
BfuAI	ACCTGC	1 cut(s)	693
BisI	GCNGC	6 cut(s)	642, 944, 960, 1076, 1674, 2058
BlsI	GCNGC	6 cut(s)	643, 945, 961, 1077, 1675, 2059
Bme1390I	CCNGG	9 cut(s)	112, 420, 653, 1336, 1590, 1866, 1887, 2054, 2075
Bme18I	GGWCC	5 cut(s)	81, 344, 378, 1352, 1821
BmeT110I	CYCGRG	1 cut(s)	1534
BmgBI	CACGTC	1 cut(s)	156
BmgT120I	GGNCC	5 cut(s)	81, 344, 378, 1352, 1821
BmiI	GGNNCC	5 cut(s)	379, 380, 433, 1032, 1687
BmrFI	CCNGG	9 cut(s)	112, 420, 653, 1336, 1590, 1866, 1887, 2054, 2075
BmrI	ACTGGG	2 cut(s)	1280, 1394
BmsI	GCATC	5 cut(s)	463, 577, 1002, 1126, 1281
BmuI	ACTGGG	2 cut(s)	1280, 1394
BpiI	GAAGAC	5 cut(s)	51, 139, 213, 1725, 1758
BpmI	CTGGAG	2 cut(s)	133, 833
Bpu14I	TTCGAA	1 cut(s)	1422
BpuMI	CCSGG	2 cut(s)	653, 1336
BsaBI	GATNNNNATC	1 cut(s)	255
BsaI	GGTCTC	1 cut(s)	490
BsaJI	CCNNGG	4 cut(s)	294, 350, 507, 1404
BsaWI	WCCGGW	3 cut(s)	329, 434, 1614
BsaXI	ACNNNNNCTCC	2 cut(s)	597, 627
Bse118I	RCCGGY	1 cut(s)	1890
Bse1I	ACTGG	6 cut(s)	172, 277, 319, 1020, 1286, 1389
Bse21I	CCTNAGG	1 cut(s)	1775
Bse3DI	GCAATG	2 cut(s)	804, 1034
Bse8I	GATNNNNATC	1 cut(s)	255
BseAI	TCCGGA	1 cut(s)	329
BseBI	CCWGG	7 cut(s)	112, 420, 1590, 1866, 1887, 2054, 2075
BseDI	CCNNGG	4 cut(s)	294, 350, 507, 1404
BseGI	GGATG	4 cut(s)	256, 1141, 1456, 1674
BseJI	GATNNNNATC	1 cut(s)	255
BseMI	GCAATG	2 cut(s)	804, 1034
BseMII	CTCAG	4 cut(s)	192, 319, 1476, 1789
BseNI	ACTGG	6 cut(s)	172, 277, 319, 1020, 1286, 1389
BseRI	GAGGAG	1 cut(s)	1571
BseXI	GCAGC	5 cut(s)	653, 930, 971, 1062, 1685
BsgI	GTGCAG	1 cut(s)	978
BshFI	GGCC	5 cut(s)	5, 104, 1645, 1890, 2078
BshNI	GGYRCC	1 cut(s)	431
BsiHKCI	CYCGRG	1 cut(s)	1534
BsiSI	CCGG	7 cut(s)	330, 435, 581, 653, 1335, 1615, 1891
BslFI	GGGAC	3 cut(s)	391, 573, 1990
BsmAI	GTCTC	6 cut(s)	109, 490, 1537, 1575, 1944, 1952
BsmFI	GGGAC	3 cut(s)	391, 573, 1990
BsmI	GAATGC	1 cut(s)	1115
BsnI	GGCC	5 cut(s)	5, 104, 1645, 1890, 2078
Bso31I	GGTCTC	1 cut(s)	490
BsoBI	CYCGRG	1 cut(s)	1534
Bsp119I	TTCGAA	1 cut(s)	1422
Bsp1286I	GDGCHC	1 cut(s)	1286
Bsp13I	TCCGGA	1 cut(s)	329
Bsp143I	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
BspACI	CCGC	5 cut(s)	98, 375, 1113, 1928, 2057
BspANI	GGCC	5 cut(s)	5, 104, 1645, 1890, 2078
BspCNI	CTCAG	4 cut(s)	191, 318, 1477, 1788
BspEI	TCCGGA	1 cut(s)	329
BspHI	TCATGA	2 cut(s)	1278, 1966
BspLI	GGNNCC	5 cut(s)	379, 380, 433, 1032, 1687
BspMI	ACCTGC	1 cut(s)	693
BspPI	GGATC	6 cut(s)	306, 519, 591, 1025, 1038, 2033
BspQI	GCTCTTC	1 cut(s)	1614
BspT104I	TTCGAA	1 cut(s)	1422
BspT107I	GGYRCC	1 cut(s)	431
BspTNI	GGTCTC	1 cut(s)	490
BsrDI	GCAATG	2 cut(s)	804, 1034
BsrFI	RCCGGY	1 cut(s)	1890
BsrI	ACTGG	6 cut(s)	172, 277, 319, 1020, 1286, 1389
BssAI	RCCGGY	1 cut(s)	1890
BssECI	CCNNGG	4 cut(s)	294, 350, 507, 1404
BssMI	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
BssSI	CACGAG	1 cut(s)	76
BssT1I	CCWWGG	3 cut(s)	294, 507, 1404
Bst2BI	CACGAG	1 cut(s)	76
Bst2UI	CCWGG	7 cut(s)	112, 420, 1590, 1866, 1887, 2054, 2075
Bst4CI	ACNGT	6 cut(s)	337, 738, 1009, 1156, 1653, 1974
Bst6I	CTCTTC	3 cut(s)	29, 1130, 1614
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstBI	TTCGAA	1 cut(s)	1422
BstC8I	GCNNGC	6 cut(s)	102, 106, 291, 494, 622, 1080
BstDEI	CTNAG	7 cut(s)	178, 305, 532, 761, 779, 1485, 1775
BstEII	GGTNACC	2 cut(s)	705, 1408
BstENI	CCTNNNNNAGG	3 cut(s)	700, 1047, 1347
BstF5I	GGATG	4 cut(s)	256, 1141, 1456, 1674
BstH2I	RGCGCY	2 cut(s)	15, 647
BstHHI	GCGC	3 cut(s)	14, 646, 1876
BstKTI	GATC	7 cut(s)	259, 301, 311, 514, 586, 1033, 2041
BstMAI	GTCTC	6 cut(s)	109, 490, 1537, 1575, 1944, 1952
BstMBI	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 451, 626, 686, 803, 998
BstNI	CCWGG	7 cut(s)	112, 420, 1590, 1866, 1887, 2054, 2075
BstNSI	RCATGY	2 cut(s)	624, 1381
BstPI	GGTNACC	2 cut(s)	705, 1408
BstSCI	CCNGG	9 cut(s)	110, 418, 651, 1334, 1588, 1864, 1885, 2052, 2073
BstSFI	CTRYAG	3 cut(s)	734, 1344, 1785
BstV1I	GCAGC	5 cut(s)	653, 930, 971, 1062, 1685
BstV2I	GAAGAC	5 cut(s)	51, 139, 213, 1725, 1758
BstX2I	RGATCY	2 cut(s)	298, 1030
BstXI	CCANNNNNNTGG	2 cut(s)	354, 467
BstYI	RGATCY	2 cut(s)	298, 1030
Bsu36I	CCTNAGG	1 cut(s)	1775
BsuRI	GGCC	5 cut(s)	5, 104, 1645, 1890, 2078
BtrI	CACGTC	1 cut(s)	156
BtsCI	GGATG	4 cut(s)	256, 1141, 1456, 1674
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	3 cut(s)	836, 1027, 1293
BveI	ACCTGC	1 cut(s)	693
Cac8I	GCNNGC	6 cut(s)	102, 106, 291, 494, 622, 1080
CaiI	CAGNNNCTG	1 cut(s)	111
CciI	TCATGA	2 cut(s)	1278, 1966
CfoI	GCGC	3 cut(s)	14, 646, 1876
Cfr10I	RCCGGY	1 cut(s)	1890
Cfr13I	GGNCC	5 cut(s)	81, 344, 378, 1352, 1821
Csp6I	GTAC	6 cut(s)	322, 776, 783, 1098, 1697, 2044
CviQI	GTAC	6 cut(s)	322, 776, 783, 1098, 1697, 2044
DdeI	CTNAG	7 cut(s)	178, 305, 532, 761, 779, 1485, 1775
DpnI	GATC	7 cut(s)	258, 300, 310, 513, 585, 1032, 2040
DpnII	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
EaeI	YGGCCR	3 cut(s)	102, 1643, 1888
Eam1104I	CTCTTC	3 cut(s)	29, 1130, 1614
EarI	CTCTTC	3 cut(s)	29, 1130, 1614
Eco130I	CCWWGG	3 cut(s)	294, 507, 1404
Eco24I	GRGCYC	1 cut(s)	1286
Eco31I	GGTCTC	1 cut(s)	490
Eco32I	GATATC	2 cut(s)	658, 913
Eco47I	GGWCC	5 cut(s)	81, 344, 378, 1352, 1821
Eco47III	AGCGCT	1 cut(s)	645
Eco57I	CTGAAG	4 cut(s)	682, 1824, 2042, 2118
Eco81I	CCTNAGG	1 cut(s)	1775
Eco88I	CYCGRG	1 cut(s)	1534
Eco91I	GGTNACC	2 cut(s)	705, 1408
EcoNI	CCTNNNNNAGG	3 cut(s)	700, 1047, 1347
EcoO109I	RGGNCCY	2 cut(s)	378, 1352
EcoO65I	GGTNACC	2 cut(s)	705, 1408
EcoRII	CCWGG	7 cut(s)	110, 418, 1588, 1864, 1885, 2052, 2073
EcoRV	GATATC	2 cut(s)	658, 913
EcoT14I	CCWWGG	3 cut(s)	294, 507, 1404
EcoT38I	GRGCYC	1 cut(s)	1286
ErhI	CCWWGG	3 cut(s)	294, 507, 1404
FalI	AAGNNNNNCTT	2 cut(s)	1062, 1094
FaqI	GGGAC	3 cut(s)	391, 573, 1990
FauI	CCCGC	2 cut(s)	368, 1921
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	1308
Fnu4HI	GCNGC	6 cut(s)	642, 944, 960, 1076, 1674, 2058
FokI	GGATG	4 cut(s)	263, 1148, 1443, 1681
FriOI	GRGCYC	1 cut(s)	1286
Fsp4HI	GCNGC	6 cut(s)	642, 944, 960, 1076, 1674, 2058
FspBI	CTAG	5 cut(s)	119, 677, 807, 1044, 1677
GlaI	GCGC	3 cut(s)	13, 645, 1875
GluI	GCNGC	6 cut(s)	642, 944, 960, 1076, 1674, 2058
GsuI	CTGGAG	2 cut(s)	133, 833
HaeII	RGCGCY	2 cut(s)	15, 647
HaeIII	GGCC	5 cut(s)	5, 104, 1645, 1890, 2078
HapII	CCGG	7 cut(s)	330, 435, 581, 653, 1335, 1615, 1891
HhaI	GCGC	3 cut(s)	14, 646, 1876
Hin6I	GCGC	3 cut(s)	12, 644, 1874
HinP1I	GCGC	3 cut(s)	12, 644, 1874
HincII	GTYRAC	1 cut(s)	1270
HindII	GTYRAC	1 cut(s)	1270
HindIII	AAGCTT	1 cut(s)	1851
HinfI	GANTC	4 cut(s)	395, 608, 1065, 1339
HpaI	GTTAAC	1 cut(s)	1270
HpaII	CCGG	7 cut(s)	330, 435, 581, 653, 1335, 1615, 1891
HphI	GGTGA	7 cut(s)	142, 266, 449, 699, 1218, 1604, 1742
Hpy166II	GTNNAC	9 cut(s)	159, 274, 344, 1270, 1309, 1481, 1824, 2083, 2091
Hpy188I	TCNGA	9 cut(s)	41, 181, 308, 565, 1234, 1511, 1657, 1993, 2098
Hpy8I	GTNNAC	9 cut(s)	159, 274, 344, 1270, 1309, 1481, 1824, 2083, 2091
Hpy99I	CGWCG	1 cut(s)	1185
HpyAV	CCTTC	9 cut(s)	416, 706, 776, 811, 1049, 1239, 1343, 1612, 2115
HpyCH4III	ACNGT	6 cut(s)	337, 738, 1009, 1156, 1653, 1974
HpyCH4IV	ACGT	4 cut(s)	155, 692, 1434, 2093
HpyCH4V	TGCA	9 cut(s)	496, 629, 797, 878, 908, 946, 959, 1082, 1858
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 451, 626, 686, 803, 998
HpyF3I	CTNAG	7 cut(s)	178, 305, 532, 761, 779, 1485, 1775
HpySE526I	ACGT	4 cut(s)	155, 692, 1434, 2093
HspAI	GCGC	3 cut(s)	12, 644, 1874
KflI	GGGWCCC	1 cut(s)	378
Kpn2I	TCCGGA	1 cut(s)	329
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	1270
Kzo9I	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
LguI	GCTCTTC	1 cut(s)	1614
LmnI	GCTCC	4 cut(s)	332, 617, 1192, 1685
Lsp1109I	GCAGC	5 cut(s)	653, 930, 971, 1062, 1685
LweI	GCATC	5 cut(s)	463, 577, 1002, 1126, 1281
MaeI	CTAG	5 cut(s)	119, 677, 807, 1044, 1677
MaeII	ACGT	4 cut(s)	155, 692, 1434, 2093
MaeIII	GTNAC	5 cut(s)	705, 1204, 1380, 1408, 2064
MalI	GATC	7 cut(s)	258, 300, 310, 513, 585, 1032, 2040
MboI	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
MfeI	CAATTG	3 cut(s)	849, 1415, 1917
MflI	RGATCY	2 cut(s)	298, 1030
MhlI	GDGCHC	1 cut(s)	1286
MlsI	TGGCCA	2 cut(s)	104, 1645
MluNI	TGGCCA	2 cut(s)	104, 1645
MlyI	GAGTC	1 cut(s)	1059
MmeI	TCCRAC	5 cut(s)	64, 583, 595, 805, 1693
Mox20I	TGGCCA	2 cut(s)	104, 1645
MroI	TCCGGA	1 cut(s)	329
MroXI	GAANNNNTTC	1 cut(s)	1398
MscI	TGGCCA	2 cut(s)	104, 1645
MseI	TTAA	4 cut(s)	648, 1239, 1269, 2122
MslI	CAYNNNNRTG	3 cut(s)	352, 934, 1277
Msp20I	TGGCCA	2 cut(s)	104, 1645
MspA1I	CMGCKG	2 cut(s)	100, 1928
MspI	CCGG	7 cut(s)	330, 435, 581, 653, 1335, 1615, 1891
MspR9I	CCNGG	9 cut(s)	112, 420, 653, 1336, 1590, 1866, 1887, 2054, 2075
MunI	CAATTG	3 cut(s)	849, 1415, 1917
Mva1269I	GAATGC	1 cut(s)	1115
MvaI	CCWGG	7 cut(s)	112, 420, 1590, 1866, 1887, 2054, 2075
MwoI	GCNNNNNNNGC	6 cut(s)	11, 451, 626, 686, 803, 998
NciI	CCSGG	2 cut(s)	653, 1336
NdeII	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
NlaIV	GGNNCC	5 cut(s)	379, 380, 433, 1032, 1687
NmuCI	GTSAC	1 cut(s)	705
NspI	RCATGY	2 cut(s)	624, 1381
NspV	TTCGAA	1 cut(s)	1422
OliI	CACNNNNGTG	2 cut(s)	352, 934
PaeI	GCATGC	1 cut(s)	624
PagI	TCATGA	2 cut(s)	1278, 1966
PciI	ACATGT	1 cut(s)	1377
PciSI	GCTCTTC	1 cut(s)	1614
PctI	GAATGC	1 cut(s)	1115
PdmI	GAANNNNTTC	1 cut(s)	1398
PfeI	GAWTC	3 cut(s)	395, 608, 1339
PflMI	CCANNNNNTGG	1 cut(s)	111
PkrI	GCNGC	6 cut(s)	643, 945, 961, 1077, 1675, 2059
PleI	GAGTC	1 cut(s)	1059
PpsI	GAGTC	1 cut(s)	1059
PpuMI	RGGWCCY	2 cut(s)	378, 1352
PscI	ACATGT	1 cut(s)	1377
PsiI	TTATAA	1 cut(s)	1902
Psp5II	RGGWCCY	2 cut(s)	378, 1352
Psp6I	CCWGG	7 cut(s)	110, 418, 1588, 1864, 1885, 2052, 2073
PspEI	GGTNACC	2 cut(s)	705, 1408
PspGI	CCWGG	7 cut(s)	110, 418, 1588, 1864, 1885, 2052, 2073
PspN4I	GGNNCC	5 cut(s)	379, 380, 433, 1032, 1687
PspPI	GGNCC	5 cut(s)	81, 344, 378, 1352, 1821
PspPPI	RGGWCCY	2 cut(s)	378, 1352
PsrI	GAACNNNNNNTAC	4 cut(s)	305, 337, 508, 540
PstNI	CAGNNNCTG	1 cut(s)	111
PsuI	RGATCY	2 cut(s)	298, 1030
RsaI	GTAC	6 cut(s)	323, 777, 784, 1099, 1698, 2045
RsaNI	GTAC	6 cut(s)	322, 776, 783, 1098, 1697, 2044
RseI	CAYNNNNRTG	3 cut(s)	352, 934, 1277
SapI	GCTCTTC	1 cut(s)	1614
SaqAI	TTAA	4 cut(s)	648, 1239, 1269, 2122
SatI	GCNGC	6 cut(s)	642, 944, 960, 1076, 1674, 2058
Sau3AI	GATC	7 cut(s)	256, 298, 308, 511, 583, 1030, 2038
Sau96I	GGNCC	5 cut(s)	81, 344, 378, 1352, 1821
SchI	GAGTC	1 cut(s)	1059
ScrFI	CCNGG	9 cut(s)	112, 420, 653, 1336, 1590, 1866, 1887, 2054, 2075
SduI	GDGCHC	1 cut(s)	1286
SfaNI	GCATC	5 cut(s)	463, 577, 1002, 1126, 1281
SfcI	CTRYAG	3 cut(s)	734, 1344, 1785
SfuI	TTCGAA	1 cut(s)	1422
SinI	GGWCC	5 cut(s)	81, 344, 378, 1352, 1821
SmiMI	CAYNNNNRTG	3 cut(s)	352, 934, 1277
SphI	GCATGC	1 cut(s)	624
SsiI	CCGC	5 cut(s)	98, 375, 1113, 1928, 2057
SspMI	CTAG	5 cut(s)	119, 677, 807, 1044, 1677
StyD4I	CCNGG	9 cut(s)	110, 418, 651, 1334, 1588, 1864, 1885, 2052, 2073
StyI	CCWWGG	3 cut(s)	294, 507, 1404
TaaI	ACNGT	6 cut(s)	337, 738, 1009, 1156, 1653, 1974
TaiI	ACGT	4 cut(s)	158, 695, 1437, 2096
TaqI	TCGA	5 cut(s)	311, 514, 660, 1422, 1998
TaqII	GACCGA	1 cut(s)	549
TatI	WGTACW	3 cut(s)	321, 775, 782
TauI	GCSGC	1 cut(s)	2060
TfiI	GAWTC	3 cut(s)	395, 608, 1339
Tru1I	TTAA	4 cut(s)	648, 1239, 1269, 2122
Tru9I	TTAA	4 cut(s)	648, 1239, 1269, 2122
TscAI	CASTG	3 cut(s)	843, 1027, 1293
TseFI	GTSAC	1 cut(s)	705
TseI	GCWGC	5 cut(s)	641, 943, 959, 1075, 1673
Tsp45I	GTSAC	1 cut(s)	705
TspDTI	ATGAA	7 cut(s)	60, 730, 957, 1764, 1775, 1983, 2097
TspGWI	ACGGA	3 cut(s)	889, 1085, 2031
TspRI	CASTG	3 cut(s)	843, 1027, 1293
Van91I	CCANNNNNTGG	1 cut(s)	111
VpaK11BI	GGWCC	5 cut(s)	81, 344, 378, 1352, 1821
XagI	CCTNNNNNAGG	3 cut(s)	700, 1047, 1347
XapI	RAATTY	4 cut(s)	1658, 1764, 1880, 1904
XceI	RCATGY	2 cut(s)	624, 1381
XmiI	GTMKAC	1 cut(s)	1308
XmnI	GAANNNNTTC	1 cut(s)	1398
XspI	CTAG	5 cut(s)	119, 677, 807, 1044, 1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.