Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

89120098 .. 89126147

Gene Structure 6050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG682200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGCCTCCAACGCACTCTCTCTCCTCCCCTCCTGCTGCCGCTCCCCCTCCATTTTCCGACATGAACCGACGTCTTCACCATTACTATCCACAAGGTCCAAGCTGGCCAGGACCACCAGATTGGCCATTTCCACAGACCAAACTCCAGTCTTCACGACGTCAACGGCAACTGCTTTATCAGAGTCAGACAAGTCCAAGACCAAGACCGAGGAAGAGCACTTGGCTCTGGAGGACGACGTTGGTGATGATCAAGCATCGGAAGAGCGTGCGAGCTTAAACCAGTTCTTTGAGCAAGCCAAGGGTCTTCTCAGATCGGACGACCAGTACGGCACTGGAACTGGAACTGGAACTGGAACACCTCGCTGGTTCTCGCCTTTAGACTGCGGGAGCGGGACCCCCTCCAACCATGATTCCCCGCTCCTTCTCTTTTTGCCTGGAATTGATGGCACCGGACTTGGCCTTGTAAGGCATCATCAGAAACTTGGAAAGATTTTTGAGGTCTCGTGCTTGCATATCCCTCCTAAGGATCGAACACCGTTTACAGACCTAGTGAAGCTGGTTGAGAGAACAATTCGTTCAGAGCATGATGCCTCACCCAATCGTCCCATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCGCTATCTGTGGCAGCCCTTAACCCGGATATCGACCTTGAGCTTATTTTAGCAAATCCAGCAACATCCTTCAGCAAGTCACCACTTCAAGCTGTATTACCTTTTCTGCAGTTCATGCCTGACTCTCCCAATCTTAGCCTTCCTCATATACTGAGTACAATTACAGGTGCAATGGTGGCTAGTCTGGAGAAGGGAGTTGGAGGACTTCCACTGCCACAGACAGTTGGAAAGCTATCACAGGATATTATTGAACCATCAATATCTAACCTTTCTGTTCTTGCTGATATCTTACCCAGAGAAACACTTCTCTGGAAGCTACAAATGATCGGTACAGCTTCTACATATGCCAATTCACGCCTCCATGCTGTAAAAGCTCATACCGTGATAGTATCCAGTGGAAGAGATCCATTGCTACCTAGTCAAGAGGAAGGTCAAAGACTCAAAAGCCTGCTTGCAACTTGTCAGGTCCGTACGTTTGAAGACTGCGGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGCTAACTGTCATCAAGAATGTTGGTATCTATCGTCGTTCAAAAGAACGAGACTTTGTTTCAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGAAAAAAACAGATGGGTTAACATAATCATGAGCCCAGTGATGCTCTCAACTTTAGCAGACGGAAAGATAGTGAGGGGCTTTGCCGGCATTCCTACAGAGGGTCCTGTATTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTGACGCAACTGTTAGAACAAAAAAACGTCCATCTGCGAGGGATAGCACATCCAATGATGTTTCTCAAAATGAAAAATGGAAGTTTACCTGAGTTAACATTATACGATGATTTCAGACTTATGGGCGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCCACAAAGTCTCATGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTGTTCTGGCCGGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATCGTACCTTTTGGTGCTGTTGGAGAAGATGATATTGGTGATCTACTTCTCGATTATGAAGACCAGATGAAAATTCCTTTCCTTAGGAAATCTATAGAGGACTTAACGGCTGAAGCTGCAAAAGTGAGGTCCACCGTTGATGGGGAGATTGGAAACCAAGCTATGCACCTTCCAGGAATTGTACCGAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCAGGGAGGAAGCAGGAATTACGAGACAGGGAGAAAGCTCATGAACTATATTTGGAAGTAAAATCGGAGGTTGAGAAGTCCCTTGCTTATTTGCAGAAAAAAAGAGAAAGTGATCCTTACAGAAACCTCGCGGCTCGGTTACAATACCAGGCCATACACGGGTTTGCGTCTGAAATTCCTTCATTTGACCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

716

Amino Acids

79.06

Weight (kDa)

6.47

Isoelectric Point (pI)

47.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_6	PF12697	173 - 387	1.6e-08	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	174 - 384	4.1e-09	alpha/beta hydrolase fold
Hydrolase_4	PF12146	182 - 383	1.8e-07	Serine aminopeptidase, S33
DAGAT	PF03982	513 - 587	7.8e-09	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1929
AatII	GACGTC	2 cut(s)	74, 161
AccB1I	GGYRCC	1 cut(s)	446
AccBSI	CCGCTC	3 cut(s)	42, 390, 418
AccII	CGCG	1 cut(s)	2084
AciI	CCGC	6 cut(s)	40, 384, 390, 416, 1128, 2084
AclWI	GGATC	3 cut(s)	534, 1040, 2060
AcoI	YGGCCR	5 cut(s)	105, 123, 1129, 1670, 1915
AcsI	RAATTY	5 cut(s)	1685, 1791, 1907, 1931, 2127
AcuI	CTGAAG	2 cut(s)	697, 1851
AcyI	GRCGYC	2 cut(s)	71, 158
AfaI	GTAC	6 cut(s)	326, 799, 973, 1114, 1725, 1902
AfiI	CCNNNNNNNGG	8 cut(s)	523, 667, 1144, 1364, 1562, 1648, 1860, 2112
AflIII	ACRYGT	1 cut(s)	1392
AgsI	TTSAA	7 cut(s)	731, 893, 1121, 1203, 1409, 1579, 1949
AjnI	CCWGG	6 cut(s)	107, 433, 1615, 1891, 1912, 2100
AjuI	GAANNNNNNNTTGG	2 cut(s)	1737, 1769
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	5 cut(s)	505, 1206, 1564, 1602, 1971
AlwI	GGATC	3 cut(s)	534, 1040, 2060
Ama87I	CYCGRG	1 cut(s)	1561
AoxI	GGCC	8 cut(s)	3, 105, 123, 457, 1129, 1670, 1915, 2103
ApeKI	GCWGC	4 cut(s)	36, 656, 1700, 1835
ApoI	RAATTY	5 cut(s)	1685, 1791, 1907, 1931, 2127
ArsI	GACNNNNNNTTYG	2 cut(s)	1832, 1864
Asp700I	GAANNNNTTC	2 cut(s)	945, 1413
AspLEI	GCGC	2 cut(s)	646, 1550
AspS9I	GGNCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
AsuC2I	CCSGG	1 cut(s)	668
AsuHPI	GGTGA	8 cut(s)	69, 254, 585, 714, 1233, 1435, 1631, 1769
AvaI	CYCGRG	1 cut(s)	1561
AvaII	GGWCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
AxyI	CCTNAGG	2 cut(s)	522, 1802
BalI	TGGCCA	2 cut(s)	107, 125
BanI	GGYRCC	1 cut(s)	446
BanII	GRGCYC	1 cut(s)	1301
BauI	CACGAG	1 cut(s)	502
BbsI	GAAGAC	5 cut(s)	66, 142, 296, 1128, 1785
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	4 cut(s)	23, 668, 1712, 1822
BccI	CCATC	7 cut(s)	437, 904, 1246, 1272, 1461, 1690, 1853
BceAI	ACGGC	3 cut(s)	180, 343, 1842
BciT130I	CCWGG	6 cut(s)	109, 435, 1617, 1893, 1914, 2102
BciVI	GTATCC	1 cut(s)	1042
BclI	TGATCA	1 cut(s)	247
BcnI	CCSGG	1 cut(s)	668
BcoDI	GTCTC	5 cut(s)	505, 1206, 1564, 1602, 1971
BfaI	CTAG	4 cut(s)	548, 822, 1059, 1704
BfmI	CTRYAG	3 cut(s)	749, 1359, 1812
BfoI	RGCGCY	1 cut(s)	1551
BfuI	GTATCC	1 cut(s)	1042
BisI	GCNGC	7 cut(s)	37, 40, 657, 1129, 1701, 1836, 2085
BlsI	GCNGC	7 cut(s)	38, 41, 658, 1130, 1702, 1837, 2086
Bme1390I	CCNGG	7 cut(s)	109, 435, 668, 1617, 1893, 1914, 2102
Bme18I	GGWCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
BmeT110I	CYCGRG	1 cut(s)	1561
BmgT120I	GGNCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
BmiI	GGNNCC	5 cut(s)	394, 395, 448, 1368, 1714
BmrFI	CCNGG	7 cut(s)	109, 435, 668, 1617, 1893, 1914, 2102
BmrI	ACTGGG	2 cut(s)	1295, 1409
BmsI	GCATC	5 cut(s)	263, 478, 577, 1141, 1296
BmuI	ACTGGG	2 cut(s)	1295, 1409
BpiI	GAAGAC	5 cut(s)	66, 142, 296, 1128, 1785
BpmI	CTGGAG	3 cut(s)	129, 248, 848
BpuEI	CTTGAG	1 cut(s)	701
BpuMI	CCSGG	1 cut(s)	668
BsaHI	GRCGYC	2 cut(s)	71, 158
BsaI	GGTCTC	1 cut(s)	505
BsaJI	CCNNGG	3 cut(s)	207, 297, 1419
BsaWI	WCCGGW	2 cut(s)	449, 1641
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	8 cut(s)	523, 667, 1144, 1364, 1562, 1648, 1860, 2112
Bse118I	RCCGGY	2 cut(s)	1349, 1917
Bse21I	CCTNAGG	2 cut(s)	522, 1802
Bse3DI	GCAATG	2 cut(s)	819, 1049
BseBI	CCWGG	6 cut(s)	109, 435, 1617, 1893, 1914, 2102
BseDI	CCNNGG	3 cut(s)	207, 297, 1419
BseGI	GGATG	3 cut(s)	707, 1471, 1701
BseLI	CCNNNNNNNGG	8 cut(s)	523, 667, 1144, 1364, 1562, 1648, 1860, 2112
BseMI	GCAATG	2 cut(s)	819, 1049
BseMII	CTCAG	3 cut(s)	322, 785, 1503
BseRI	GAGGAG	1 cut(s)	14
BseXI	GCAGC	4 cut(s)	23, 668, 1712, 1822
Bsh1236I	CGCG	1 cut(s)	2084
BshFI	GGCC	8 cut(s)	5, 107, 125, 459, 1131, 1672, 1917, 2105
BshNI	GGYRCC	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	219
BsiHKCI	CYCGRG	1 cut(s)	1561
BsiSI	CCGG	6 cut(s)	450, 668, 1350, 1642, 1673, 1918
BsiWI	CGTACG	1 cut(s)	1112
BslFI	GGGAC	3 cut(s)	406, 588, 2017
BslI	CCNNNNNNNGG	8 cut(s)	523, 667, 1144, 1364, 1562, 1648, 1860, 2112
BsmAI	GTCTC	5 cut(s)	505, 1206, 1564, 1602, 1971
BsmFI	GGGAC	3 cut(s)	406, 588, 2017
BsmI	GAATGC	1 cut(s)	1353
BsnI	GGCC	8 cut(s)	5, 107, 125, 459, 1131, 1672, 1917, 2105
Bso31I	GGTCTC	1 cut(s)	505
BsoBI	CYCGRG	1 cut(s)	1561
Bsp1286I	GDGCHC	2 cut(s)	219, 1301
Bsp143I	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
BspACI	CCGC	6 cut(s)	40, 384, 390, 416, 1128, 2084
BspANI	GGCC	8 cut(s)	5, 107, 125, 459, 1131, 1672, 1917, 2105
BspCNI	CTCAG	3 cut(s)	321, 786, 1504
BspFNI	CGCG	1 cut(s)	2084
BspHI	TCATGA	2 cut(s)	1293, 1993
BspLI	GGNNCC	5 cut(s)	394, 395, 448, 1368, 1714
BspMAI	CTGCAG	1 cut(s)	753
BspPI	GGATC	3 cut(s)	534, 1040, 2060
BspQI	GCTCTTC	3 cut(s)	207, 255, 1641
BspT107I	GGYRCC	1 cut(s)	446
BspTNI	GGTCTC	1 cut(s)	505
BsrBI	CCGCTC	3 cut(s)	42, 390, 418
BsrDI	GCAATG	2 cut(s)	819, 1049
BsrFI	RCCGGY	2 cut(s)	1349, 1917
BssAI	RCCGGY	2 cut(s)	1349, 1917
BssECI	CCNNGG	3 cut(s)	207, 297, 1419
BssMI	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
BssNI	GRCGYC	2 cut(s)	71, 158
BssSI	CACGAG	1 cut(s)	502
BssT1I	CCWWGG	2 cut(s)	297, 1419
Bst2BI	CACGAG	1 cut(s)	502
Bst2UI	CCWGG	6 cut(s)	109, 435, 1617, 1893, 1914, 2102
Bst4CI	ACNGT	7 cut(s)	537, 865, 1024, 1171, 1434, 1680, 1855
Bst6I	CTCTTC	5 cut(s)	207, 255, 1036, 1145, 1641
BstACI	GRCGYC	2 cut(s)	71, 158
BstAPI	GCANNNNNTGC	2 cut(s)	641, 757
BstC8I	GCNNGC	9 cut(s)	105, 267, 271, 294, 509, 637, 1091, 1095, 1351
BstDEI	CTNAG	6 cut(s)	308, 522, 776, 794, 1512, 1802
BstF5I	GGATG	3 cut(s)	707, 1471, 1701
BstFNI	CGCG	1 cut(s)	2084
BstH2I	RGCGCY	1 cut(s)	1551
BstHHI	GCGC	2 cut(s)	646, 1550
BstKTI	GATC	7 cut(s)	250, 314, 529, 969, 1048, 1762, 2068
BstMAI	GTCTC	5 cut(s)	505, 1206, 1564, 1602, 1971
BstMBI	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 641, 701, 757, 818, 1013, 1350, 1835
BstNI	CCWGG	6 cut(s)	109, 435, 1617, 1893, 1914, 2102
BstNSI	RCATGY	2 cut(s)	639, 1396
BstSCI	CCNGG	7 cut(s)	107, 433, 666, 1615, 1891, 1912, 2100
BstSFI	CTRYAG	3 cut(s)	749, 1359, 1812
BstUI	CGCG	1 cut(s)	2084
BstV1I	GCAGC	4 cut(s)	23, 668, 1712, 1822
BstV2I	GAAGAC	5 cut(s)	66, 142, 296, 1128, 1785
BstX2I	RGATCY	1 cut(s)	1045
BstXI	CCANNNNNNTGG	1 cut(s)	121
BstYI	RGATCY	1 cut(s)	1045
Bsu36I	CCTNAGG	2 cut(s)	522, 1802
BsuI	GTATCC	1 cut(s)	1042
BsuRI	GGCC	8 cut(s)	5, 107, 125, 459, 1131, 1672, 1917, 2105
BtsCI	GGATG	3 cut(s)	707, 1471, 1701
BtsI	GCAGTG	1 cut(s)	851
BtsIMutI	CAGTG	4 cut(s)	330, 851, 1042, 1308
Cac8I	GCNNGC	9 cut(s)	105, 267, 271, 294, 509, 637, 1091, 1095, 1351
CciI	TCATGA	2 cut(s)	1293, 1993
CfoI	GCGC	2 cut(s)	646, 1550
Cfr10I	RCCGGY	2 cut(s)	1349, 1917
Cfr13I	GGNCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
CseI	GACGC	2 cut(s)	1435, 2109
Csp6I	GTAC	6 cut(s)	325, 798, 972, 1113, 1724, 1901
CviQI	GTAC	6 cut(s)	325, 798, 972, 1113, 1724, 1901
DdeI	CTNAG	6 cut(s)	308, 522, 776, 794, 1512, 1802
DpnI	GATC	7 cut(s)	249, 313, 528, 968, 1047, 1761, 2067
DpnII	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
EaeI	YGGCCR	5 cut(s)	105, 123, 1129, 1670, 1915
Eam1104I	CTCTTC	5 cut(s)	207, 255, 1036, 1145, 1641
EarI	CTCTTC	5 cut(s)	207, 255, 1036, 1145, 1641
Eco130I	CCWWGG	2 cut(s)	297, 1419
Eco24I	GRGCYC	1 cut(s)	1301
Eco31I	GGTCTC	1 cut(s)	505
Eco32I	GATATC	2 cut(s)	673, 928
Eco47I	GGWCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
Eco57I	CTGAAG	2 cut(s)	697, 1851
Eco81I	CCTNAGG	2 cut(s)	522, 1802
Eco88I	CYCGRG	1 cut(s)	1561
EcoO109I	RGGNCCY	2 cut(s)	393, 1367
EcoRII	CCWGG	6 cut(s)	107, 433, 1615, 1891, 1912, 2100
EcoRV	GATATC	2 cut(s)	673, 928
EcoT14I	CCWWGG	2 cut(s)	297, 1419
EcoT38I	GRGCYC	1 cut(s)	1301
ErhI	CCWWGG	2 cut(s)	297, 1419
FalI	AAGNNNNNCTT	2 cut(s)	2053, 2085
FaqI	GGGAC	3 cut(s)	406, 588, 2017
FauI	CCCGC	3 cut(s)	377, 383, 423
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	1 cut(s)	247
Fnu4HI	GCNGC	7 cut(s)	37, 40, 657, 1129, 1701, 1836, 2085
FokI	GGATG	3 cut(s)	694, 1458, 1708
FriOI	GRGCYC	1 cut(s)	1301
Fsp4HI	GCNGC	7 cut(s)	37, 40, 657, 1129, 1701, 1836, 2085
FspBI	CTAG	4 cut(s)	548, 822, 1059, 1704
GlaI	GCGC	2 cut(s)	645, 1549
GluI	GCNGC	7 cut(s)	37, 40, 657, 1129, 1701, 1836, 2085
GsuI	CTGGAG	3 cut(s)	129, 248, 848
HaeII	RGCGCY	1 cut(s)	1551
HaeIII	GGCC	8 cut(s)	5, 107, 125, 459, 1131, 1672, 1917, 2105
HapII	CCGG	6 cut(s)	450, 668, 1350, 1642, 1673, 1918
HgaI	GACGC	2 cut(s)	1435, 2109
HhaI	GCGC	2 cut(s)	646, 1550
Hin1I	GRCGYC	2 cut(s)	71, 158
Hin6I	GCGC	2 cut(s)	644, 1548
HinP1I	GCGC	2 cut(s)	644, 1548
HincII	GTYRAC	3 cut(s)	162, 1285, 1518
HindII	GTYRAC	3 cut(s)	162, 1285, 1518
HinfI	GANTC	5 cut(s)	182, 410, 623, 764, 1080
HpaI	GTTAAC	2 cut(s)	1285, 1518
HpaII	CCGG	6 cut(s)	450, 668, 1350, 1642, 1673, 1918
HphI	GGTGA	8 cut(s)	69, 254, 585, 714, 1233, 1435, 1631, 1769
Hpy166II	GTNNAC	6 cut(s)	162, 540, 1285, 1508, 1518, 1851
Hpy8I	GTNNAC	6 cut(s)	162, 540, 1285, 1508, 1518, 1851
Hpy99I	CGWCG	4 cut(s)	73, 160, 239, 1200
HpyAV	CCTTC	9 cut(s)	431, 721, 791, 826, 1064, 1254, 1639, 1898, 2142
HpyCH4III	ACNGT	7 cut(s)	537, 865, 1024, 1171, 1434, 1680, 1855
HpyCH4IV	ACGT	5 cut(s)	71, 158, 237, 1115, 1449
HpyCH4V	TGCA	7 cut(s)	511, 751, 812, 1097, 1838, 1885, 2047
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 641, 701, 757, 818, 1013, 1350, 1835
HpyF3I	CTNAG	6 cut(s)	308, 522, 776, 794, 1512, 1802
HpySE526I	ACGT	5 cut(s)	71, 158, 237, 1115, 1449
Hsp92I	GRCGYC	2 cut(s)	71, 158
HspAI	GCGC	2 cut(s)	644, 1548
KflI	GGGWCCC	1 cut(s)	393
KroI	GCCGGC	1 cut(s)	1349
KroNI	GCCGGC	1 cut(s)	1351
Ksp22I	TGATCA	1 cut(s)	247
KspAI	GTTAAC	2 cut(s)	1285, 1518
Kzo9I	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
LguI	GCTCTTC	3 cut(s)	207, 255, 1641
LmnI	GCTCC	5 cut(s)	47, 387, 423, 632, 1712
Lsp1109I	GCAGC	4 cut(s)	23, 668, 1712, 1822
LweI	GCATC	5 cut(s)	263, 478, 577, 1141, 1296
MaeI	CTAG	4 cut(s)	548, 822, 1059, 1704
MaeII	ACGT	5 cut(s)	71, 158, 237, 1115, 1449
MaeIII	GTNAC	4 cut(s)	720, 1395, 1423, 2091
MalI	GATC	7 cut(s)	249, 313, 528, 968, 1047, 1761, 2067
MbiI	CCGCTC	3 cut(s)	42, 390, 418
MboI	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
MfeI	CAATTG	1 cut(s)	1944
MflI	RGATCY	1 cut(s)	1045
MhlI	GDGCHC	2 cut(s)	219, 1301
MlsI	TGGCCA	2 cut(s)	107, 125
MluNI	TGGCCA	2 cut(s)	107, 125
MlyI	GAGTC	3 cut(s)	191, 758, 1074
MmeI	TCCRAC	7 cut(s)	33, 82, 426, 598, 820, 847, 1720
Mox20I	TGGCCA	2 cut(s)	107, 125
MroNI	GCCGGC	1 cut(s)	1349
MroXI	GAANNNNTTC	2 cut(s)	945, 1413
MscI	TGGCCA	2 cut(s)	107, 125
MseI	TTAA	7 cut(s)	275, 663, 1254, 1284, 1517, 1823, 2149
MslI	CAYNNNNRTG	1 cut(s)	1292
Msp20I	TGGCCA	2 cut(s)	107, 125
MspI	CCGG	6 cut(s)	450, 668, 1350, 1642, 1673, 1918
MspR9I	CCNGG	7 cut(s)	109, 435, 668, 1617, 1893, 1914, 2102
MunI	CAATTG	1 cut(s)	1944
Mva1269I	GAATGC	1 cut(s)	1353
MvaI	CCWGG	6 cut(s)	109, 435, 1617, 1893, 1914, 2102
MvnI	CGCG	1 cut(s)	2084
MwoI	GCNNNNNNNGC	8 cut(s)	11, 641, 701, 757, 818, 1013, 1350, 1835
NaeI	GCCGGC	1 cut(s)	1351
NciI	CCSGG	1 cut(s)	668
NdeI	CATATG	1 cut(s)	985
NdeII	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
NgoMIV	GCCGGC	1 cut(s)	1349
NlaIV	GGNNCC	5 cut(s)	394, 395, 448, 1368, 1714
NmuCI	GTSAC	2 cut(s)	720, 1423
NspI	RCATGY	2 cut(s)	639, 1396
PaeI	GCATGC	1 cut(s)	639
PagI	TCATGA	2 cut(s)	1293, 1993
PciI	ACATGT	1 cut(s)	1392
PciSI	GCTCTTC	3 cut(s)	207, 255, 1641
PctI	GAATGC	1 cut(s)	1353
PdiI	GCCGGC	1 cut(s)	1351
PdmI	GAANNNNTTC	2 cut(s)	945, 1413
PfeI	GAWTC	2 cut(s)	410, 623
Pfl23II	CGTACG	1 cut(s)	1112
PfoI	TCCNGGA	1 cut(s)	1891
PkrI	GCNGC	7 cut(s)	38, 41, 658, 1130, 1702, 1837, 2086
PleI	GAGTC	3 cut(s)	190, 758, 1074
PpsI	GAGTC	3 cut(s)	190, 758, 1074
PpuMI	RGGWCCY	2 cut(s)	393, 1367
PscI	ACATGT	1 cut(s)	1392
PsiI	TTATAA	1 cut(s)	1929
Psp5II	RGGWCCY	2 cut(s)	393, 1367
Psp6I	CCWGG	6 cut(s)	107, 433, 1615, 1891, 1912, 2100
PspGI	CCWGG	6 cut(s)	107, 433, 1615, 1891, 1912, 2100
PspLI	CGTACG	1 cut(s)	1112
PspN4I	GGNNCC	5 cut(s)	394, 395, 448, 1368, 1714
PspPI	GGNCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
PspPPI	RGGWCCY	2 cut(s)	393, 1367
PsrI	GAACNNNNNNTAC	2 cut(s)	523, 555
PstI	CTGCAG	1 cut(s)	753
PsuI	RGATCY	1 cut(s)	1045
RsaI	GTAC	6 cut(s)	326, 799, 973, 1114, 1725, 1902
RsaNI	GTAC	6 cut(s)	325, 798, 972, 1113, 1724, 1901
RseI	CAYNNNNRTG	1 cut(s)	1292
SapI	GCTCTTC	3 cut(s)	207, 255, 1641
SaqAI	TTAA	7 cut(s)	275, 663, 1254, 1284, 1517, 1823, 2149
SatI	GCNGC	7 cut(s)	37, 40, 657, 1129, 1701, 1836, 2085
Sau3AI	GATC	7 cut(s)	247, 311, 526, 966, 1045, 1759, 2065
Sau96I	GGNCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
SchI	GAGTC	3 cut(s)	191, 758, 1074
ScrFI	CCNGG	7 cut(s)	109, 435, 668, 1617, 1893, 1914, 2102
SduI	GDGCHC	2 cut(s)	219, 1301
SfaNI	GCATC	5 cut(s)	263, 478, 577, 1141, 1296
SfcI	CTRYAG	3 cut(s)	749, 1359, 1812
SinI	GGWCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SmlI	CTYRAG	1 cut(s)	680
SmoI	CTYRAG	1 cut(s)	680
SphI	GCATGC	1 cut(s)	639
SsiI	CCGC	6 cut(s)	40, 384, 390, 416, 1128, 2084
SspMI	CTAG	4 cut(s)	548, 822, 1059, 1704
StyD4I	CCNGG	7 cut(s)	107, 433, 666, 1615, 1891, 1912, 2100
StyI	CCWWGG	2 cut(s)	297, 1419
TaaI	ACNGT	7 cut(s)	537, 865, 1024, 1171, 1434, 1680, 1855
TaiI	ACGT	5 cut(s)	74, 161, 240, 1118, 1452
TaqI	TCGA	3 cut(s)	529, 675, 1770
TaqII	GACCGA	1 cut(s)	221
TatI	WGTACW	1 cut(s)	797
TauI	GCSGC	3 cut(s)	42, 1131, 2087
TfiI	GAWTC	2 cut(s)	410, 623
Tru1I	TTAA	7 cut(s)	275, 663, 1254, 1284, 1517, 1823, 2149
Tru9I	TTAA	7 cut(s)	275, 663, 1254, 1284, 1517, 1823, 2149
TscAI	CASTG	4 cut(s)	337, 858, 1042, 1308
TseFI	GTSAC	2 cut(s)	720, 1423
TseI	GCWGC	4 cut(s)	36, 656, 1700, 1835
Tsp45I	GTSAC	2 cut(s)	720, 1423
TspDTI	ATGAA	7 cut(s)	78, 745, 1508, 1791, 1802, 2010, 2124
TspGWI	ACGGA	2 cut(s)	1100, 1341
TspRI	CASTG	4 cut(s)	337, 858, 1042, 1308
VpaK11BI	GGWCC	6 cut(s)	96, 111, 393, 1108, 1367, 1848
XapI	RAATTY	5 cut(s)	1685, 1791, 1907, 1931, 2127
XceI	RCATGY	2 cut(s)	639, 1396
XcmI	CCANNNNNNNNNTGG	1 cut(s)	329
XmnI	GAANNNNTTC	2 cut(s)	945, 1413
XspI	CTAG	4 cut(s)	548, 822, 1059, 1704
ZraI	GACGTC	2 cut(s)	72, 159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.