Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

83079108 .. 83084456

Gene Structure 5349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022394

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGCCTCCAACGCACTCTCTCTCCTCCCCTCCCGCTGCCGCTCCCCCTCCATTTTCCGATACGAACCGACGTCGACTTCACCATTACTATCCTCAAGTTCCAAGTTACCTCCGCTGGCTAGGACCACCAGATTGGCCATTTCCACAGACCAAACTCCAGTCTTCACGACGTCAACGGCAACTGCTTTATCAGAGTCAGACAAGTCCAAGACCAAGGAAGAGCACTTGGCGCCTCTGGAGGACGACCGTGATGATCAAGCATCGGAAGATCAGCGTGCGAGCTTAAACCAGTTCTTTGAGCAAGCCAAGGATCTTCTCAGATCGGACGACCAGTACGGTACTGGAACTGGACCGCCTCGCTGGTTCTCGCCTTTAGACTGCGGCAGCGGGAGCGGGACCCCCTCCAACCATGATTCCCCTCTCCTTCTCTTTTTGCCTGGAATTGATGGCACCGGACTTGGCCTTGTAAGGCATCATCAGAAACTTGGAAAGGTTTTTCAGGTCTCGTGCTTGCATATCCCTCCTAAGGACCGAACACCGTTTACAGACTTAGTGAAGCTGGTTGAGAGAACAATTCGTTCAGAGCATGATGCCTCACCGGATCGTCCCATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCACTATCTGTGGCAGCCCTTAACCCGGATATCGACCTTGAGCTTATTTTAGCAAATCCAGCAACATCCTTCAGCAAGTCACCACTTCAAGCTGTATTACCTTTACTGCAGTTCATGCCTGACTCTCCCAATCTTAGCCTTCCTCATATACTGAGTACAATTACAGGTGCAATGTTGGCTAGTCTGGAGAAGGGAGTTGGAGGACTTCCACTGCCACAGACAGTTGGAAAGCTATCACGGGATATTATTGAACCATCAATATCTAACCTTTCTACCACTTTTTGCACTGCCCTGCCATCTTTTAGAATGATGGTGCTAATATCCTGTTACCTGTCTATTAGTGGAAGAGATCCATTGCTACCTAGTCAAGAGGAAGGTCAAAGACTCAAAAGCCTGCTTGCAACTTGTCAGGTCCGTACGTTTGAAGACTGCGGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGCTAACTGTCATCAAGAATGTTGGTATCTATCGTCATTCAAAAGAACGAGACTTTGTTTCAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGAAAAAAACAGATGGGTTAACATAATCATGAGCCCAGTGATGCTCTCAACTTTAGCAGACGGAAAGATAGTGAGGGGCTTTGCCGGGATTCCTACAGAGGGTCCTGTATTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTGACGCAACTGTTCGAACAAAAAAACGTCCATCTGCGAGGGATAGCACATCCAATGATGTTTCTCAAAATGAAAAATGGAAGTTTACCTGAGTTAACATTATACGATGATTTCAGACTTATGGGCGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCTACAAAGTCTCATGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTATTCTGGCCGGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATTGTACCTTTTGGTGCTGTTGGAGAAGATGATATTGGTGATCTACTTCTCGATTATGAAGACCAGATGAAAATTCCTTTCCTTAGGAAATCTATAGAGGACTTAACGGCTGAAGCTGCAAAAGTGAGGTCCACCGTTGATGGGGAGATTGGAAACCAAGCTATGCACCTTCCAGGAATTGTACCGAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCAGGGAGGAAGCAGGAATTACGAGACAGGGAGAAAGCTCATGAACTGTATTTGGAAGTAAAATCGGAGGTTGAGAAGTCCCTTGCTTATTTGCAGAAAAAAAGAAAGAGTGATCCTTACAGAAACCTCGCGGCTCGGTTACAATACCAGGCCATACACGGGTTTACGTCTGAAGTTCCTTCATTTGACCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

700

Amino Acids

77.43

Weight (kDa)

6.65

Isoelectric Point (pI)

46.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_6	PF12697	174 - 370	5e-08	Alpha/beta hydrolase family
Abhydrolase_1	PF00561	175 - 367	5.3e-06	alpha/beta hydrolase fold
DAGAT	PF03982	496 - 570	7.4e-09	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1878
AatII	GACGTC	2 cut(s)	74, 173
AccB1I	GGYRCC	2 cut(s)	229, 449
AccBSI	CCGCTC	2 cut(s)	42, 393
AccI	GTMKAC	1 cut(s)	74
AccII	CGCG	1 cut(s)	2033
AciI	CCGC	9 cut(s)	34, 40, 113, 353, 381, 387, 393, 1077, 2033
AclWI	GGATC	4 cut(s)	318, 609, 989, 2009
AcoI	YGGCCR	4 cut(s)	135, 1078, 1619, 1864
AcsI	RAATTY	4 cut(s)	1634, 1740, 1856, 1880
AcuI	CTGAAG	3 cut(s)	700, 1800, 2094
AcyI	GRCGYC	3 cut(s)	71, 170, 230
AfaI	GTAC	6 cut(s)	335, 340, 802, 1063, 1674, 1851
AfiI	CCNNNNNNNGG	8 cut(s)	526, 670, 1093, 1313, 1511, 1597, 1809, 2061
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	7 cut(s)	734, 896, 1070, 1152, 1358, 1528, 1898
AjnI	CCWGG	5 cut(s)	436, 1564, 1840, 1861, 2049
AjuI	GAANNNNNNNTTGG	2 cut(s)	1686, 1718
AluBI	AGCT	9 cut(s)	282, 559, 688, 737, 877, 1652, 1784, 1829, 1940
AluI	AGCT	9 cut(s)	282, 559, 688, 737, 877, 1652, 1784, 1829, 1940
Alw21I	GWGCWC	1 cut(s)	225
Alw26I	GTCTC	5 cut(s)	508, 1155, 1513, 1551, 1920
AlwI	GGATC	4 cut(s)	318, 609, 989, 2009
Ama87I	CYCGRG	1 cut(s)	1510
AoxI	GGCC	7 cut(s)	3, 135, 460, 1078, 1619, 1864, 2052
ApeKI	GCWGC	5 cut(s)	36, 384, 659, 1649, 1784
ApoI	RAATTY	4 cut(s)	1634, 1740, 1856, 1880
ArsI	GACNNNNNNTTYG	2 cut(s)	1781, 1813
Asp700I	GAANNNNTTC	1 cut(s)	1362
AspLEI	GCGC	2 cut(s)	232, 1499
AspS9I	GGNCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
AsuC2I	CCSGG	2 cut(s)	671, 1300
AsuHPI	GGTGA	7 cut(s)	72, 588, 717, 1182, 1384, 1580, 1718
AsuII	TTCGAA	1 cut(s)	1386
AvaI	CYCGRG	1 cut(s)	1510
AvaII	GGWCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
AxyI	CCTNAGG	2 cut(s)	525, 1751
BalI	TGGCCA	1 cut(s)	137
BanI	GGYRCC	2 cut(s)	229, 449
BanII	GRGCYC	1 cut(s)	1250
BauI	CACGAG	1 cut(s)	505
BbsI	GAAGAC	3 cut(s)	154, 1077, 1734
Bbv12I	GWGCWC	1 cut(s)	225
BbvI	GCAGC	5 cut(s)	23, 396, 671, 1661, 1771
BccI	CCATC	9 cut(s)	440, 907, 949, 949, 1195, 1221, 1410, 1639, 1802
BceAI	ACGGC	2 cut(s)	192, 1791
BciT130I	CCWGG	5 cut(s)	438, 1566, 1842, 1863, 2051
BclI	TGATCA	1 cut(s)	253
BcnI	CCSGG	2 cut(s)	671, 1300
BcoDI	GTCTC	5 cut(s)	508, 1155, 1513, 1551, 1920
BfaI	CTAG	4 cut(s)	120, 825, 1008, 1653
BfmI	CTRYAG	3 cut(s)	752, 1308, 1761
BfoI	RGCGCY	2 cut(s)	233, 1500
BisI	GCNGC	9 cut(s)	37, 40, 382, 385, 660, 1078, 1650, 1785, 2034
BlsI	GCNGC	9 cut(s)	38, 41, 383, 386, 661, 1079, 1651, 1786, 2035
Bme1390I	CCNGG	7 cut(s)	438, 671, 1300, 1566, 1842, 1863, 2051
Bme18I	GGWCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
BmeT110I	CYCGRG	1 cut(s)	1510
BmgT120I	GGNCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
BmiI	GGNNCC	6 cut(s)	231, 397, 398, 451, 1317, 1663
BmrFI	CCNGG	7 cut(s)	438, 671, 1300, 1566, 1842, 1863, 2051
BmrI	ACTGGG	2 cut(s)	1244, 1358
BmsI	GCATC	5 cut(s)	269, 481, 580, 1090, 1245
BmuI	ACTGGG	2 cut(s)	1244, 1358
BpiI	GAAGAC	3 cut(s)	154, 1077, 1734
BpmI	CTGGAG	3 cut(s)	141, 257, 851
Bpu14I	TTCGAA	1 cut(s)	1386
BpuEI	CTTGAG	2 cut(s)	79, 704
BpuMI	CCSGG	2 cut(s)	671, 1300
BsaHI	GRCGYC	3 cut(s)	71, 170, 230
BsaI	GGTCTC	1 cut(s)	508
BsaJI	CCNNGG	3 cut(s)	213, 306, 1368
BsaWI	WCCGGW	3 cut(s)	452, 598, 1590
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	8 cut(s)	526, 670, 1093, 1313, 1511, 1597, 1809, 2061
Bse118I	RCCGGY	1 cut(s)	1866
Bse1I	ACTGG	7 cut(s)	158, 289, 331, 346, 352, 1250, 1353
Bse21I	CCTNAGG	2 cut(s)	525, 1751
Bse3DI	GCAATG	2 cut(s)	822, 998
BseBI	CCWGG	5 cut(s)	438, 1566, 1842, 1863, 2051
BseDI	CCNNGG	3 cut(s)	213, 306, 1368
BseGI	GGATG	3 cut(s)	710, 1420, 1650
BseLI	CCNNNNNNNGG	8 cut(s)	526, 670, 1093, 1313, 1511, 1597, 1809, 2061
BseMI	GCAATG	2 cut(s)	822, 998
BseMII	CTCAG	3 cut(s)	331, 788, 1452
BseNI	ACTGG	7 cut(s)	158, 289, 331, 346, 352, 1250, 1353
BseRI	GAGGAG	1 cut(s)	14
BseXI	GCAGC	5 cut(s)	23, 396, 671, 1661, 1771
Bsh1236I	CGCG	1 cut(s)	2033
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	7 cut(s)	5, 137, 462, 1080, 1621, 1866, 2054
BshNI	GGYRCC	2 cut(s)	229, 449
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	1 cut(s)	225
BsiHKCI	CYCGRG	1 cut(s)	1510
BsiSI	CCGG	7 cut(s)	453, 599, 671, 1299, 1591, 1622, 1867
BsiWI	CGTACG	1 cut(s)	1061
BslFI	GGGAC	3 cut(s)	409, 591, 1966
BslI	CCNNNNNNNGG	8 cut(s)	526, 670, 1093, 1313, 1511, 1597, 1809, 2061
BsmAI	GTCTC	5 cut(s)	508, 1155, 1513, 1551, 1920
BsmFI	GGGAC	3 cut(s)	409, 591, 1966
BsnI	GGCC	7 cut(s)	5, 137, 462, 1080, 1621, 1866, 2054
Bso31I	GGTCTC	1 cut(s)	508
BsoBI	CYCGRG	1 cut(s)	1510
Bsp119I	TTCGAA	1 cut(s)	1386
Bsp1286I	GDGCHC	2 cut(s)	225, 1250
Bsp143I	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
BspACI	CCGC	9 cut(s)	34, 40, 113, 353, 381, 387, 393, 1077, 2033
BspANI	GGCC	7 cut(s)	5, 137, 462, 1080, 1621, 1866, 2054
BspCNI	CTCAG	3 cut(s)	330, 789, 1453
BspFNI	CGCG	1 cut(s)	2033
BspHI	TCATGA	2 cut(s)	1242, 1942
BspLI	GGNNCC	6 cut(s)	231, 397, 398, 451, 1317, 1663
BspMAI	CTGCAG	1 cut(s)	756
BspPI	GGATC	4 cut(s)	318, 609, 989, 2009
BspQI	GCTCTTC	2 cut(s)	213, 1590
BspT104I	TTCGAA	1 cut(s)	1386
BspT107I	GGYRCC	2 cut(s)	229, 449
BspTNI	GGTCTC	1 cut(s)	508
BsrBI	CCGCTC	2 cut(s)	42, 393
BsrDI	GCAATG	2 cut(s)	822, 998
BsrFI	RCCGGY	1 cut(s)	1866
BsrI	ACTGG	7 cut(s)	158, 289, 331, 346, 352, 1250, 1353
BssAI	RCCGGY	1 cut(s)	1866
BssECI	CCNNGG	3 cut(s)	213, 306, 1368
BssMI	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
BssNI	GRCGYC	3 cut(s)	71, 170, 230
BssSI	CACGAG	1 cut(s)	505
BssT1I	CCWWGG	3 cut(s)	213, 306, 1368
Bst2BI	CACGAG	1 cut(s)	505
Bst2UI	CCWGG	5 cut(s)	438, 1566, 1842, 1863, 2051
Bst4CI	ACNGT	9 cut(s)	248, 338, 540, 868, 1120, 1383, 1629, 1804, 1950
Bst6I	CTCTTC	4 cut(s)	213, 985, 1094, 1590
BstACI	GRCGYC	3 cut(s)	71, 170, 230
BstAPI	GCANNNNNTGC	2 cut(s)	644, 760
BstBI	TTCGAA	1 cut(s)	1386
BstC8I	GCNNGC	8 cut(s)	117, 276, 280, 303, 512, 640, 1040, 1044
BstDEI	CTNAG	7 cut(s)	317, 525, 550, 779, 797, 1461, 1751
BstF5I	GGATG	3 cut(s)	710, 1420, 1650
BstFNI	CGCG	1 cut(s)	2033
BstH2I	RGCGCY	2 cut(s)	233, 1500
BstHHI	GCGC	2 cut(s)	232, 1499
BstKTI	GATC	8 cut(s)	256, 271, 313, 323, 604, 997, 1711, 2017
BstMAI	GTCTC	5 cut(s)	508, 1155, 1513, 1551, 1920
BstMBI	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
BstMCI	CGRYCG	1 cut(s)	247
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 229, 390, 644, 704, 760, 821, 1784
BstNI	CCWGG	5 cut(s)	438, 1566, 1842, 1863, 2051
BstNSI	RCATGY	2 cut(s)	642, 1345
BstSCI	CCNGG	7 cut(s)	436, 669, 1298, 1564, 1840, 1861, 2049
BstSFI	CTRYAG	3 cut(s)	752, 1308, 1761
BstUI	CGCG	1 cut(s)	2033
BstV1I	GCAGC	5 cut(s)	23, 396, 671, 1661, 1771
BstV2I	GAAGAC	3 cut(s)	154, 1077, 1734
BstX2I	RGATCY	2 cut(s)	310, 994
BstXI	CCANNNNNNTGG	1 cut(s)	133
BstYI	RGATCY	2 cut(s)	310, 994
Bsu36I	CCTNAGG	2 cut(s)	525, 1751
BsuRI	GGCC	7 cut(s)	5, 137, 462, 1080, 1621, 1866, 2054
BtsCI	GGATG	3 cut(s)	710, 1420, 1650
BtsI	GCAGTG	2 cut(s)	854, 930
BtsIMutI	CAGTG	3 cut(s)	854, 930, 1257
Cac8I	GCNNGC	8 cut(s)	117, 276, 280, 303, 512, 640, 1040, 1044
CciI	TCATGA	2 cut(s)	1242, 1942
CfoI	GCGC	2 cut(s)	232, 1499
Cfr10I	RCCGGY	1 cut(s)	1866
Cfr13I	GGNCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
CseI	GACGC	1 cut(s)	1384
Csp6I	GTAC	6 cut(s)	334, 339, 801, 1062, 1673, 1850
CviAII	CATG	8 cut(s)	410, 587, 639, 760, 1243, 1342, 1550, 1943
CviQI	GTAC	6 cut(s)	334, 339, 801, 1062, 1673, 1850
DdeI	CTNAG	7 cut(s)	317, 525, 550, 779, 797, 1461, 1751
DinI	GGCGCC	1 cut(s)	231
DpnI	GATC	8 cut(s)	255, 270, 312, 322, 603, 996, 1710, 2016
DpnII	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
EaeI	YGGCCR	4 cut(s)	135, 1078, 1619, 1864
Eam1104I	CTCTTC	4 cut(s)	213, 985, 1094, 1590
EarI	CTCTTC	4 cut(s)	213, 985, 1094, 1590
Eco130I	CCWWGG	3 cut(s)	213, 306, 1368
Eco24I	GRGCYC	1 cut(s)	1250
Eco31I	GGTCTC	1 cut(s)	508
Eco32I	GATATC	1 cut(s)	676
Eco47I	GGWCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
Eco57I	CTGAAG	3 cut(s)	700, 1800, 2094
Eco81I	CCTNAGG	2 cut(s)	525, 1751
Eco88I	CYCGRG	1 cut(s)	1510
EcoO109I	RGGNCCY	2 cut(s)	396, 1316
EcoRII	CCWGG	5 cut(s)	436, 1564, 1840, 1861, 2049
EcoRV	GATATC	1 cut(s)	676
EcoT14I	CCWWGG	3 cut(s)	213, 306, 1368
EcoT38I	GRGCYC	1 cut(s)	1250
EgeI	GGCGCC	1 cut(s)	231
EheI	GGCGCC	1 cut(s)	231
ErhI	CCWWGG	3 cut(s)	213, 306, 1368
FaeI	CATG	8 cut(s)	413, 590, 642, 763, 1246, 1345, 1553, 1946
FaqI	GGGAC	3 cut(s)	409, 591, 1966
FatI	CATG	8 cut(s)	409, 586, 638, 759, 1242, 1341, 1549, 1942
FauI	CCCGC	3 cut(s)	41, 380, 386
FbaI	TGATCA	1 cut(s)	253
FblI	GTMKAC	1 cut(s)	74
Fnu4HI	GCNGC	9 cut(s)	37, 40, 382, 385, 660, 1078, 1650, 1785, 2034
FokI	GGATG	3 cut(s)	697, 1407, 1657
FriOI	GRGCYC	1 cut(s)	1250
Fsp4HI	GCNGC	9 cut(s)	37, 40, 382, 385, 660, 1078, 1650, 1785, 2034
FspBI	CTAG	4 cut(s)	120, 825, 1008, 1653
GlaI	GCGC	2 cut(s)	231, 1498
GluI	GCNGC	9 cut(s)	37, 40, 382, 385, 660, 1078, 1650, 1785, 2034
GsuI	CTGGAG	3 cut(s)	141, 257, 851
HaeII	RGCGCY	2 cut(s)	233, 1500
HaeIII	GGCC	7 cut(s)	5, 137, 462, 1080, 1621, 1866, 2054
HapII	CCGG	7 cut(s)	453, 599, 671, 1299, 1591, 1622, 1867
HgaI	GACGC	1 cut(s)	1384
HhaI	GCGC	2 cut(s)	232, 1499
Hin1I	GRCGYC	3 cut(s)	71, 170, 230
Hin1II	CATG	8 cut(s)	413, 590, 642, 763, 1246, 1345, 1553, 1946
Hin6I	GCGC	2 cut(s)	230, 1497
HinP1I	GCGC	2 cut(s)	230, 1497
HincII	GTYRAC	4 cut(s)	75, 174, 1234, 1467
HindII	GTYRAC	4 cut(s)	75, 174, 1234, 1467
HinfI	GANTC	6 cut(s)	194, 413, 626, 767, 1029, 1303
HpaI	GTTAAC	2 cut(s)	1234, 1467
HpaII	CCGG	7 cut(s)	453, 599, 671, 1299, 1591, 1622, 1867
HphI	GGTGA	7 cut(s)	72, 588, 717, 1182, 1384, 1580, 1718
Hpy166II	GTNNAC	8 cut(s)	75, 174, 543, 1234, 1457, 1467, 1800, 2067
Hpy188III	TCNNGA	9 cut(s)	166, 236, 830, 1013, 1126, 1243, 1512, 1718, 1943
Hpy8I	GTNNAC	8 cut(s)	75, 174, 543, 1234, 1457, 1467, 1800, 2067
Hpy99I	CGWCG	3 cut(s)	73, 76, 172
HpyAV	CCTTC	9 cut(s)	434, 724, 794, 829, 1013, 1203, 1588, 1847, 2091
HpyCH4III	ACNGT	9 cut(s)	248, 338, 540, 868, 1120, 1383, 1629, 1804, 1950
HpyCH4IV	ACGT	5 cut(s)	71, 170, 1064, 1398, 2069
HpyCH4V	TGCA	9 cut(s)	514, 647, 754, 815, 930, 1046, 1787, 1834, 1996
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 229, 390, 644, 704, 760, 821, 1784
HpyF3I	CTNAG	7 cut(s)	317, 525, 550, 779, 797, 1461, 1751
HpySE526I	ACGT	5 cut(s)	71, 170, 1064, 1398, 2069
Hsp92I	GRCGYC	3 cut(s)	71, 170, 230
Hsp92II	CATG	8 cut(s)	413, 590, 642, 763, 1246, 1345, 1553, 1946
HspAI	GCGC	2 cut(s)	230, 1497
KasI	GGCGCC	1 cut(s)	229
KflI	GGGWCCC	1 cut(s)	396
Ksp22I	TGATCA	1 cut(s)	253
KspAI	GTTAAC	2 cut(s)	1234, 1467
Kzo9I	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
LguI	GCTCTTC	2 cut(s)	213, 1590
LmnI	GCTCC	4 cut(s)	47, 390, 635, 1661
Lsp1109I	GCAGC	5 cut(s)	23, 396, 671, 1661, 1771
LweI	GCATC	5 cut(s)	269, 481, 580, 1090, 1245
MaeI	CTAG	4 cut(s)	120, 825, 1008, 1653
MaeII	ACGT	5 cut(s)	71, 170, 1064, 1398, 2069
MaeIII	GTNAC	6 cut(s)	105, 723, 971, 1344, 1372, 2040
MalI	GATC	8 cut(s)	255, 270, 312, 322, 603, 996, 1710, 2016
MbiI	CCGCTC	2 cut(s)	42, 393
MboI	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
MfeI	CAATTG	1 cut(s)	1893
MflI	RGATCY	2 cut(s)	310, 994
MhlI	GDGCHC	2 cut(s)	225, 1250
MlsI	TGGCCA	1 cut(s)	137
MluNI	TGGCCA	1 cut(s)	137
Mly113I	GGCGCC	1 cut(s)	230
MlyI	GAGTC	3 cut(s)	203, 761, 1023
MmeI	TCCRAC	6 cut(s)	33, 429, 601, 823, 850, 1669
Mox20I	TGGCCA	1 cut(s)	137
MroXI	GAANNNNTTC	1 cut(s)	1362
MscI	TGGCCA	1 cut(s)	137
MseI	TTAA	7 cut(s)	284, 666, 1203, 1233, 1466, 1772, 2098
MslI	CAYNNNNRTG	1 cut(s)	1241
Msp20I	TGGCCA	1 cut(s)	137
MspA1I	CMGCKG	3 cut(s)	36, 115, 387
MspI	CCGG	7 cut(s)	453, 599, 671, 1299, 1591, 1622, 1867
MspR9I	CCNGG	7 cut(s)	438, 671, 1300, 1566, 1842, 1863, 2051
MunI	CAATTG	1 cut(s)	1893
MvaI	CCWGG	5 cut(s)	438, 1566, 1842, 1863, 2051
MvnI	CGCG	1 cut(s)	2033
MwoI	GCNNNNNNNGC	8 cut(s)	11, 229, 390, 644, 704, 760, 821, 1784
NarI	GGCGCC	1 cut(s)	230
NciI	CCSGG	2 cut(s)	671, 1300
NdeII	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
NlaIII	CATG	8 cut(s)	413, 590, 642, 763, 1246, 1345, 1553, 1946
NlaIV	GGNNCC	6 cut(s)	231, 397, 398, 451, 1317, 1663
NmuCI	GTSAC	2 cut(s)	723, 1372
NspI	RCATGY	2 cut(s)	642, 1345
NspV	TTCGAA	1 cut(s)	1386
PaeI	GCATGC	1 cut(s)	642
PagI	TCATGA	2 cut(s)	1242, 1942
PciI	ACATGT	1 cut(s)	1341
PciSI	GCTCTTC	2 cut(s)	213, 1590
PdmI	GAANNNNTTC	1 cut(s)	1362
PfeI	GAWTC	3 cut(s)	413, 626, 1303
Pfl23II	CGTACG	1 cut(s)	1061
PfoI	TCCNGGA	1 cut(s)	1840
PkrI	GCNGC	9 cut(s)	38, 41, 383, 386, 661, 1079, 1651, 1786, 2035
PleI	GAGTC	3 cut(s)	202, 761, 1023
PluTI	GGCGCC	1 cut(s)	233
PpsI	GAGTC	3 cut(s)	202, 761, 1023
PpuMI	RGGWCCY	2 cut(s)	396, 1316
PscI	ACATGT	1 cut(s)	1341
PsiI	TTATAA	1 cut(s)	1878
Psp5II	RGGWCCY	2 cut(s)	396, 1316
Psp6I	CCWGG	5 cut(s)	436, 1564, 1840, 1861, 2049
PspGI	CCWGG	5 cut(s)	436, 1564, 1840, 1861, 2049
PspLI	CGTACG	1 cut(s)	1061
PspN4I	GGNNCC	6 cut(s)	231, 397, 398, 451, 1317, 1663
PspPI	GGNCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
PspPPI	RGGWCCY	2 cut(s)	396, 1316
PsrI	GAACNNNNNNTAC	2 cut(s)	526, 558
PstI	CTGCAG	1 cut(s)	756
PsuI	RGATCY	2 cut(s)	310, 994
RsaI	GTAC	6 cut(s)	335, 340, 802, 1063, 1674, 1851
RsaNI	GTAC	6 cut(s)	334, 339, 801, 1062, 1673, 1850
RseI	CAYNNNNRTG	1 cut(s)	1241
SalI	GTCGAC	1 cut(s)	73
SapI	GCTCTTC	2 cut(s)	213, 1590
SaqAI	TTAA	7 cut(s)	284, 666, 1203, 1233, 1466, 1772, 2098
SatI	GCNGC	9 cut(s)	37, 40, 382, 385, 660, 1078, 1650, 1785, 2034
Sau3AI	GATC	8 cut(s)	253, 268, 310, 320, 601, 994, 1708, 2014
Sau96I	GGNCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
SchI	GAGTC	3 cut(s)	203, 761, 1023
ScrFI	CCNGG	7 cut(s)	438, 671, 1300, 1566, 1842, 1863, 2051
SduI	GDGCHC	2 cut(s)	225, 1250
SfaNI	GCATC	5 cut(s)	269, 481, 580, 1090, 1245
SfcI	CTRYAG	3 cut(s)	752, 1308, 1761
SfoI	GGCGCC	1 cut(s)	231
SfuI	TTCGAA	1 cut(s)	1386
SinI	GGWCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
SmiMI	CAYNNNNRTG	1 cut(s)	1241
SmlI	CTYRAG	2 cut(s)	94, 683
SmoI	CTYRAG	2 cut(s)	94, 683
SphI	GCATGC	1 cut(s)	642
SsiI	CCGC	9 cut(s)	34, 40, 113, 353, 381, 387, 393, 1077, 2033
SspDI	GGCGCC	1 cut(s)	229
SspMI	CTAG	4 cut(s)	120, 825, 1008, 1653
StyD4I	CCNGG	7 cut(s)	436, 669, 1298, 1564, 1840, 1861, 2049
StyI	CCWWGG	3 cut(s)	213, 306, 1368
TaaI	ACNGT	9 cut(s)	248, 338, 540, 868, 1120, 1383, 1629, 1804, 1950
TaiI	ACGT	5 cut(s)	74, 173, 1067, 1401, 2072
TaqI	TCGA	4 cut(s)	74, 678, 1386, 1719
TaqII	GACCGA	1 cut(s)	546
TatI	WGTACW	1 cut(s)	800
TauI	GCSGC	4 cut(s)	42, 384, 1080, 2036
TfiI	GAWTC	3 cut(s)	413, 626, 1303
Tru1I	TTAA	7 cut(s)	284, 666, 1203, 1233, 1466, 1772, 2098
Tru9I	TTAA	7 cut(s)	284, 666, 1203, 1233, 1466, 1772, 2098
TscAI	CASTG	3 cut(s)	861, 937, 1257
TseFI	GTSAC	2 cut(s)	723, 1372
TseI	GCWGC	5 cut(s)	36, 384, 659, 1649, 1784
Tsp45I	GTSAC	2 cut(s)	723, 1372
TspDTI	ATGAA	6 cut(s)	748, 1457, 1740, 1751, 1959, 2073
TspGWI	ACGGA	2 cut(s)	1049, 1290
TspRI	CASTG	3 cut(s)	861, 937, 1257
VpaK11BI	GGWCC	7 cut(s)	123, 350, 396, 529, 1057, 1316, 1797
XapI	RAATTY	4 cut(s)	1634, 1740, 1856, 1880
XceI	RCATGY	2 cut(s)	642, 1345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	338
XmiI	GTMKAC	1 cut(s)	74
XmnI	GAANNNNTTC	1 cut(s)	1362
XspI	CTAG	4 cut(s)	120, 825, 1008, 1653
ZraI	GACGTC	2 cut(s)	72, 171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.