Rmu_sc0000405.1_g000016

acyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000405.1
Physical Location & Seq
Reverse (-)
85907 .. 92464
6558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000405.1_g000016.1.cds

Sequence Viewer

Length: 1479 bp
atgtggacgagaaaagcaccaacctcgtcacaaggttcttttctctgccttccagaaaaggacttcttgccttacggacaagaccaagaccgtcccatatatcttgttggagaatctcttggagcatgccttgcactctctgtggcagcccttaacccggatatcgaccttgagcttattttagcaaatccagcaacatccttcagcaagtcaccacttcaagctgtattacctttactgcagttcatgcctgactctcccaatcttagccttcctcatatactgagtacaattacaggtgcaatggtggctagtctggagaagggagttggaggacttccactgccacagacagttggaaagctatcacgggatattattgaaccatcaatatctaacctttctgttcttgctgatatcttacccagagaaacacttctctggaagctacaaatgatcagtacagcttctacatatgccaattcacgcctccatgctgtaaaagctcataccgtgatagtatccagtggaagagatccattgctacctagtcaagaggaaggtcaaagactcaaaagcctgcttgcaacttgtcaggtccgtacgtttgaagactgcggccatttcctcttcttggaagatgcttttgatttgctaactgtcatcaagaatgttggtatctatcgtcgttcaaaagaacgagactttgtttcagattacataccaccatcaccttccgaagttaaaggcataatggaaaaaaacagattggttaacataatcatgagcccagtgatgctctcaactttagcagacggaaagttagtgaggggctttgccgggattcctacagagggtcctgtattacttatgggcgctgttcctgtctcgggaaaaaactttttcaaacttctctctacaaagtctcatgtcctactctatccaggtggagtgcgtgaggctcttcaccggaagggggaagcatataagttgttctggccggaacggtcagaatttgtgaggatggcagctagatttggagccaaaatcgtaccttttggtgctgttggagaagatgatattggtgatctacttctcgattatgaagaccagatgaaaattcctttccttaggaaatctatagaggacttaacggctgaagctgcaaaagtgaggtccaccgttgatggggagattggaaaccaagctatgcaccttccaggaattgtaccgaaatttcctggccggttttattataaatttgggaaaccaattgaaacagcagggaggaaggaggaattacgagacagggagaaagctcatgaactatatttggaagtaaaatcggaggttgagaagtcccttgcttatttgcagaaaaaaagagaaagtgatccttacagaaacctcgcggctcggttacaataccaggccatacacgggtttgcgtctgaagttccttcatttgaccttgattaa

Protein Analysis

492

Amino Acids

54.44

Weight (kDa)

6.78

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1257
AccII CGCG 1 cut(s) 1412
AciI CCGC 2 cut(s) 618, 1412
AclWI GGATC 2 cut(s) 530, 1388
AcoI YGGCCR 3 cut(s) 619, 998, 1243
AcsI RAATTY 4 cut(s) 1013, 1119, 1235, 1259
AcuI CTGAAG 3 cut(s) 187, 1179, 1473
AfaI GTAC 5 cut(s) 289, 463, 604, 1053, 1230
AfiI CCNNNNNNNGG 7 cut(s) 157, 634, 854, 890, 976, 1188, 1440
AgsI TTSAA 6 cut(s) 221, 383, 611, 693, 907, 1277
AjnI CCWGG 4 cut(s) 943, 1219, 1240, 1428
AjuI GAANNNNNNNTTGG 2 cut(s) 1065, 1097
Alw26I GTCTC 4 cut(s) 696, 892, 930, 1299
AlwI GGATC 2 cut(s) 530, 1388
Ama87I CYCGRG 1 cut(s) 889
AoxI GGCC 4 cut(s) 619, 998, 1243, 1431
ApeKI GCWGC 3 cut(s) 146, 1028, 1163
ApoI RAATTY 4 cut(s) 1013, 1119, 1235, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 1160, 1192
Asp700I GAANNNNTTC 1 cut(s) 435
AspLEI GCGC 1 cut(s) 878
AspS9I GGNCC 3 cut(s) 598, 857, 1176
AsuC2I CCSGG 2 cut(s) 158, 841
AsuHPI GGTGA 4 cut(s) 204, 723, 959, 1097
AvaI CYCGRG 1 cut(s) 889
AvaII GGWCC 3 cut(s) 598, 857, 1176
AxyI CCTNAGG 1 cut(s) 1130
BanII GRGCYC 1 cut(s) 791
BbsI GAAGAC 2 cut(s) 618, 1113
BbvI GCAGC 3 cut(s) 158, 1040, 1150
BccI CCATC 4 cut(s) 394, 736, 1018, 1181
BceAI ACGGC 1 cut(s) 1170
BcgI CGANNNNNNTGC 2 cut(s) 6, 40
BciT130I CCWGG 4 cut(s) 945, 1221, 1242, 1430
BciVI GTATCC 1 cut(s) 532
BclI TGATCA 1 cut(s) 456
BcnI CCSGG 2 cut(s) 158, 841
BcoDI GTCTC 4 cut(s) 696, 892, 930, 1299
BfaI CTAG 3 cut(s) 312, 549, 1032
BfmI CTRYAG 3 cut(s) 239, 849, 1140
BfoI RGCGCY 1 cut(s) 879
BfuI GTATCC 1 cut(s) 532
BisI GCNGC 5 cut(s) 147, 619, 1029, 1164, 1413
BlsI GCNGC 5 cut(s) 148, 620, 1030, 1165, 1414
Bme1390I CCNGG 6 cut(s) 158, 841, 945, 1221, 1242, 1430
Bme18I GGWCC 3 cut(s) 598, 857, 1176
BmeT110I CYCGRG 1 cut(s) 889
BmgT120I GGNCC 3 cut(s) 598, 857, 1176
BmiI GGNNCC 2 cut(s) 858, 1042
BmrFI CCNGG 6 cut(s) 158, 841, 945, 1221, 1242, 1430
BmrI ACTGGG 1 cut(s) 785
BmsI GCATC 2 cut(s) 631, 786
BmuI ACTGGG 1 cut(s) 785
BpiI GAAGAC 2 cut(s) 618, 1113
BpmI CTGGAG 1 cut(s) 338
BpuEI CTTGAG 1 cut(s) 191
BpuMI CCSGG 2 cut(s) 158, 841
BsaWI WCCGGW 1 cut(s) 969
Bsc4I CCNNNNNNNGG 7 cut(s) 157, 634, 854, 890, 976, 1188, 1440
Bse118I RCCGGY 1 cut(s) 1245
Bse1I ACTGG 2 cut(s) 525, 791
Bse21I CCTNAGG 1 cut(s) 1130
Bse3DI GCAATG 2 cut(s) 309, 539
BseBI CCWGG 4 cut(s) 945, 1221, 1242, 1430
BseGI GGATG 2 cut(s) 197, 1029
BseLI CCNNNNNNNGG 7 cut(s) 157, 634, 854, 890, 976, 1188, 1440
BseMI GCAATG 2 cut(s) 309, 539
BseMII CTCAG 1 cut(s) 275
BseNI ACTGG 2 cut(s) 525, 791
BseXI GCAGC 3 cut(s) 158, 1040, 1150
Bsh1236I CGCG 1 cut(s) 1412
BshFI GGCC 4 cut(s) 621, 1000, 1245, 1433
BsiHKCI CYCGRG 1 cut(s) 889
BsiSI CCGG 5 cut(s) 158, 840, 970, 1001, 1246
BsiWI CGTACG 1 cut(s) 602
BslFI GGGAC 2 cut(s) 78, 1345
BslI CCNNNNNNNGG 7 cut(s) 157, 634, 854, 890, 976, 1188, 1440
BsmAI GTCTC 4 cut(s) 696, 892, 930, 1299
BsmFI GGGAC 2 cut(s) 78, 1345
BsnI GGCC 4 cut(s) 621, 1000, 1245, 1433
BsoBI CYCGRG 1 cut(s) 889
Bsp1286I GDGCHC 1 cut(s) 791
Bsp143I GATC 4 cut(s) 456, 535, 1087, 1393
BspACI CCGC 2 cut(s) 618, 1412
BspANI GGCC 4 cut(s) 621, 1000, 1245, 1433
BspCNI CTCAG 1 cut(s) 276
BspFNI CGCG 1 cut(s) 1412
BspHI TCATGA 2 cut(s) 783, 1321
BspLI GGNNCC 2 cut(s) 858, 1042
BspMAI CTGCAG 1 cut(s) 243
BspPI GGATC 2 cut(s) 530, 1388
BspQI GCTCTTC 1 cut(s) 969
BsrDI GCAATG 2 cut(s) 309, 539
BsrFI RCCGGY 1 cut(s) 1245
BsrI ACTGG 2 cut(s) 525, 791
BssAI RCCGGY 1 cut(s) 1245
BssMI GATC 4 cut(s) 456, 535, 1087, 1393
Bst2UI CCWGG 4 cut(s) 945, 1221, 1242, 1430
Bst4CI ACNGT 6 cut(s) 92, 355, 514, 661, 1008, 1183
Bst6I CTCTTC 3 cut(s) 526, 635, 969
BstAPI GCANNNNNTGC 2 cut(s) 131, 247
BstC8I GCNNGC 3 cut(s) 127, 581, 585
BstDEI CTNAG 3 cut(s) 266, 284, 1130
BstF5I GGATG 2 cut(s) 197, 1029
BstFNI CGCG 1 cut(s) 1412
BstH2I RGCGCY 1 cut(s) 879
BstHHI GCGC 1 cut(s) 878
BstKTI GATC 4 cut(s) 459, 538, 1090, 1396
BstMAI GTCTC 4 cut(s) 696, 892, 930, 1299
BstMBI GATC 4 cut(s) 456, 535, 1087, 1393
BstMWI GCNNNNNNNGC 6 cut(s) 131, 191, 247, 308, 503, 1163
BstNI CCWGG 4 cut(s) 945, 1221, 1242, 1430
BstNSI RCATGY 1 cut(s) 129
BstSCI CCNGG 6 cut(s) 156, 839, 943, 1219, 1240, 1428
BstSFI CTRYAG 3 cut(s) 239, 849, 1140
BstUI CGCG 1 cut(s) 1412
BstV1I GCAGC 3 cut(s) 158, 1040, 1150
BstV2I GAAGAC 2 cut(s) 618, 1113
BstX2I RGATCY 1 cut(s) 535
BstYI RGATCY 1 cut(s) 535
Bsu36I CCTNAGG 1 cut(s) 1130
BsuI GTATCC 1 cut(s) 532
BsuRI GGCC 4 cut(s) 621, 1000, 1245, 1433
BtsCI GGATG 2 cut(s) 197, 1029
BtsI GCAGTG 1 cut(s) 341
BtsIMutI CAGTG 3 cut(s) 341, 532, 798
Cac8I GCNNGC 3 cut(s) 127, 581, 585
CciI TCATGA 2 cut(s) 783, 1321
CfoI GCGC 1 cut(s) 878
Cfr10I RCCGGY 1 cut(s) 1245
Cfr13I GGNCC 3 cut(s) 598, 857, 1176
CseI GACGC 1 cut(s) 1437
Csp6I GTAC 5 cut(s) 288, 462, 603, 1052, 1229
CviAII CATG 6 cut(s) 126, 247, 494, 784, 929, 1322
CviQI GTAC 5 cut(s) 288, 462, 603, 1052, 1229
DdeI CTNAG 3 cut(s) 266, 284, 1130
DpnI GATC 4 cut(s) 458, 537, 1089, 1395
DpnII GATC 4 cut(s) 456, 535, 1087, 1393
EaeI YGGCCR 3 cut(s) 619, 998, 1243
Eam1104I CTCTTC 3 cut(s) 526, 635, 969
EarI CTCTTC 3 cut(s) 526, 635, 969
Eco24I GRGCYC 1 cut(s) 791
Eco32I GATATC 2 cut(s) 163, 418
Eco47I GGWCC 3 cut(s) 598, 857, 1176
Eco57I CTGAAG 3 cut(s) 187, 1179, 1473
Eco81I CCTNAGG 1 cut(s) 1130
Eco88I CYCGRG 1 cut(s) 889
EcoO109I RGGNCCY 1 cut(s) 857
EcoRII CCWGG 4 cut(s) 943, 1219, 1240, 1428
EcoRV GATATC 2 cut(s) 163, 418
EcoT38I GRGCYC 1 cut(s) 791
FaeI CATG 6 cut(s) 129, 250, 497, 787, 932, 1325
FalI AAGNNNNNCTT 4 cut(s) 50, 82, 1381, 1413
FaqI GGGAC 2 cut(s) 78, 1345
FatI CATG 6 cut(s) 125, 246, 493, 783, 928, 1321
FauNDI CATATG 1 cut(s) 475
FbaI TGATCA 1 cut(s) 456
Fnu4HI GCNGC 5 cut(s) 147, 619, 1029, 1164, 1413
FokI GGATG 2 cut(s) 184, 1036
FriOI GRGCYC 1 cut(s) 791
Fsp4HI GCNGC 5 cut(s) 147, 619, 1029, 1164, 1413
FspBI CTAG 3 cut(s) 312, 549, 1032
GlaI GCGC 1 cut(s) 877
GluI GCNGC 5 cut(s) 147, 619, 1029, 1164, 1413
GsuI CTGGAG 1 cut(s) 338
HaeII RGCGCY 1 cut(s) 879
HaeIII GGCC 4 cut(s) 621, 1000, 1245, 1433
HapII CCGG 5 cut(s) 158, 840, 970, 1001, 1246
HgaI GACGC 1 cut(s) 1437
HhaI GCGC 1 cut(s) 878
Hin1II CATG 6 cut(s) 129, 250, 497, 787, 932, 1325
Hin6I GCGC 1 cut(s) 876
HinP1I GCGC 1 cut(s) 876
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HinfI GANTC 4 cut(s) 113, 254, 570, 844
HpaI GTTAAC 1 cut(s) 775
HpaII CCGG 5 cut(s) 158, 840, 970, 1001, 1246
HphI GGTGA 4 cut(s) 204, 723, 959, 1097
Hpy166II GTNNAC 3 cut(s) 6, 775, 1179
Hpy188I TCNGA 5 cut(s) 715, 739, 1012, 1348, 1453
Hpy188III TCNNGA 9 cut(s) 53, 317, 442, 554, 667, 784, 891, 1097, 1322
Hpy8I GTNNAC 3 cut(s) 6, 775, 1179
Hpy99I CGWCG 1 cut(s) 690
HpyCH4III ACNGT 6 cut(s) 92, 355, 514, 661, 1008, 1183
HpyCH4IV ACGT 1 cut(s) 605
HpyCH4V TGCA 7 cut(s) 134, 241, 302, 587, 1166, 1213, 1375
HpyF10VI GCNNNNNNNGC 6 cut(s) 131, 191, 247, 308, 503, 1163
HpyF3I CTNAG 3 cut(s) 266, 284, 1130
HpySE526I ACGT 1 cut(s) 605
Hsp92II CATG 6 cut(s) 129, 250, 497, 787, 932, 1325
HspAI GCGC 1 cut(s) 876
Ksp22I TGATCA 1 cut(s) 456
KspAI GTTAAC 1 cut(s) 775
Kzo9I GATC 4 cut(s) 456, 535, 1087, 1393
LguI GCTCTTC 1 cut(s) 969
LmnI GCTCC 2 cut(s) 122, 1040
Lsp1109I GCAGC 3 cut(s) 158, 1040, 1150
LweI GCATC 2 cut(s) 631, 786
MaeI CTAG 3 cut(s) 312, 549, 1032
MaeII ACGT 1 cut(s) 605
MaeIII GTNAC 3 cut(s) 27, 210, 1419
MalI GATC 4 cut(s) 458, 537, 1089, 1395
MboI GATC 4 cut(s) 456, 535, 1087, 1393
MboII GAAGA 7 cut(s) 543, 622, 623, 650, 956, 1085, 1118
MfeI CAATTG 1 cut(s) 1272
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 1 cut(s) 791
MluCI AATT 9 cut(s) 291, 481, 1013, 1119, 1224, 1235, 1259, 1272, 1298
MlyI GAGTC 2 cut(s) 248, 564
MmeI TCCRAC 4 cut(s) 88, 310, 337, 1048
MroXI GAANNNNTTC 1 cut(s) 435
MseI TTAA 5 cut(s) 153, 744, 774, 1151, 1477
MslI CAYNNNNRTG 1 cut(s) 782
MspI CCGG 5 cut(s) 158, 840, 970, 1001, 1246
MspR9I CCNGG 6 cut(s) 158, 841, 945, 1221, 1242, 1430
MunI CAATTG 1 cut(s) 1272
MvaI CCWGG 4 cut(s) 945, 1221, 1242, 1430
MvnI CGCG 1 cut(s) 1412
MwoI GCNNNNNNNGC 6 cut(s) 131, 191, 247, 308, 503, 1163
NciI CCSGG 2 cut(s) 158, 841
NdeI CATATG 1 cut(s) 475
NdeII GATC 4 cut(s) 456, 535, 1087, 1393
NlaIII CATG 6 cut(s) 129, 250, 497, 787, 932, 1325
NlaIV GGNNCC 2 cut(s) 858, 1042
NmuCI GTSAC 2 cut(s) 27, 210
NspI RCATGY 1 cut(s) 129
PaeI GCATGC 1 cut(s) 129
PagI TCATGA 2 cut(s) 783, 1321
PciSI GCTCTTC 1 cut(s) 969
PdmI GAANNNNTTC 1 cut(s) 435
PfeI GAWTC 2 cut(s) 113, 844
Pfl23II CGTACG 1 cut(s) 602
PfoI TCCNGGA 1 cut(s) 1219
PkrI GCNGC 5 cut(s) 148, 620, 1030, 1165, 1414
PleI GAGTC 2 cut(s) 248, 564
PpsI GAGTC 2 cut(s) 248, 564
PpuMI RGGWCCY 1 cut(s) 857
PsiI TTATAA 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 857
Psp6I CCWGG 4 cut(s) 943, 1219, 1240, 1428
PspGI CCWGG 4 cut(s) 943, 1219, 1240, 1428
PspLI CGTACG 1 cut(s) 602
PspN4I GGNNCC 2 cut(s) 858, 1042
PspPI GGNCC 3 cut(s) 598, 857, 1176
PspPPI RGGWCCY 1 cut(s) 857
PstI CTGCAG 1 cut(s) 243
PsuI RGATCY 1 cut(s) 535
RsaI GTAC 5 cut(s) 289, 463, 604, 1053, 1230
RsaNI GTAC 5 cut(s) 288, 462, 603, 1052, 1229
RseI CAYNNNNRTG 1 cut(s) 782
SapI GCTCTTC 1 cut(s) 969
SaqAI TTAA 5 cut(s) 153, 744, 774, 1151, 1477
SatI GCNGC 5 cut(s) 147, 619, 1029, 1164, 1413
Sau3AI GATC 4 cut(s) 456, 535, 1087, 1393
Sau96I GGNCC 3 cut(s) 598, 857, 1176
SchI GAGTC 2 cut(s) 248, 564
ScrFI CCNGG 6 cut(s) 158, 841, 945, 1221, 1242, 1430
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 2 cut(s) 631, 786
SfcI CTRYAG 3 cut(s) 239, 849, 1140
SinI GGWCC 3 cut(s) 598, 857, 1176
SmiMI CAYNNNNRTG 1 cut(s) 782
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
SphI GCATGC 1 cut(s) 129
Sse9I AATT 9 cut(s) 291, 481, 1013, 1119, 1224, 1235, 1259, 1272, 1298
SsiI CCGC 2 cut(s) 618, 1412
SspMI CTAG 3 cut(s) 312, 549, 1032
StyD4I CCNGG 6 cut(s) 156, 839, 943, 1219, 1240, 1428
TaaI ACNGT 6 cut(s) 92, 355, 514, 661, 1008, 1183
TaiI ACGT 1 cut(s) 608
TaqI TCGA 2 cut(s) 165, 1098
TasI AATT 9 cut(s) 291, 481, 1013, 1119, 1224, 1235, 1259, 1272, 1298
TatI WGTACW 2 cut(s) 287, 461
TauI GCSGC 2 cut(s) 621, 1415
TfiI GAWTC 2 cut(s) 113, 844
Tru1I TTAA 5 cut(s) 153, 744, 774, 1151, 1477
Tru9I TTAA 5 cut(s) 153, 744, 774, 1151, 1477
TscAI CASTG 3 cut(s) 348, 532, 798
TseFI GTSAC 2 cut(s) 27, 210
TseI GCWGC 3 cut(s) 146, 1028, 1163
Tsp45I GTSAC 2 cut(s) 27, 210
TspDTI ATGAA 5 cut(s) 235, 1119, 1130, 1338, 1452
TspGWI ACGGA 3 cut(s) 90, 590, 831
TspRI CASTG 3 cut(s) 348, 532, 798
VpaK11BI GGWCC 3 cut(s) 598, 857, 1176
XapI RAATTY 4 cut(s) 1013, 1119, 1235, 1259
XceI RCATGY 1 cut(s) 129
XmnI GAANNNNTTC 1 cut(s) 435
XspI CTAG 3 cut(s) 312, 549, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.