Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

91262176 .. 91268144

Gene Structure 5969 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG695800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGCCTCCAACGCACTCTCTCTCCTCCCCTCCTGCTGCCGCTCCCCGTCCATTTTCCGACATGAACCGACGTCTTCACCATTACTATCCACAAGGTCCAAGCTGGCTAGGACCACCAGATTGGCCATTTCCACAGACCAAACTCCAGTCTTCACGACGTCAACGGCAACTGCTTTGTCAGAGTCAGACAAGTCCAAGATCAAGACCGAGGAAGAGCACTTGGCTCTGGAGGACGACGTTGGTGATGATCAAGCATCGGAAGAGCGTGCGAGCTTAAACCAGTTCTTTGAGCAAGCCAAGGGTCTTCTCAGATCGGACGACCAGTACGGGCAGTACGGCACTGGAACACCTCGCTGGTTCTCGCCTTTAGACTGCGGGAGCGGGACCCCCTCCAACCATGATTCCCCGCTCCTTCTCTTTTTGCCTGGAATTGATGGCACCGGACTTGGCCTTGTAAGGCATCATCAGAAACTTGGAAAGATTTTTGAGGTCTCGTGCTTGCATATCCCTCCTAAGGATCGAACACCGTTTATAGACTTAGTGAAGCTGGTTGGGAGAACAATTCGTTCAGAGCATGATGCCTCACCCGATCGTCCCATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCACTCTCTGTGGCAGCCCTTAACCCGGATATCGACCTTGAGCTTATTTTAGCAAATCCAGCAACATCCTTCAGCAAGTCACCACTTCAAGCTGTATTACCTTTACTGCAGTTCATGCCTGACTCTCCCAATCTTAGCCTTCCTCATATACTGAGTACAATTACAGGTGCAATGGTGGCTAGTCTGGAGAAGGGAGTTGGAGGGCTTCCACTGCCACAGACAGTTGGAAAGCTATCACGGGATATTATTGAACCATCAATATCTAACCTTTCTGTTCTTGCTGATATCTTACCCAGAGAAACACTTCTCTGGAAGCTACAAATGATCAGTACAGCTTCTACATATGCCAATTCACGCCTCCATGCTGTAAAAGCTCATACCGTGATAGTATCCAGTGGAAGAGATCCATTGCTACCTAGTCAAGAGGAAGGTCAAAGACTCAAAAGCCTGCTTGCAACTTGTCAGGTCCGTACGTTTGAAGACTGCGGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGCTAACTGTCATCAAGAATGTTGGTATCTATCGTCGTTCAAAAGAACGAGACTTTGTTTCAGATTACATACCACCATCACCTTCCGAAGTTAAAGGCATAATGGAAAAAAACAGATTGGTTAACATAATCATGAGCCCAGTGATGCTCTCAACTTTAGCAGACGGAAAGATAGTGAGGGGCTTTGCCGGGATTCCTACAGAGGGTCCTGTATTGTATGTTGGTTATCACATGTTACTGGGATTTGAAATAGTTCCCTTGGTGACTCAACTGTTCGAACAAAAAAACGTCCATCTGCGAGGGATAGCACATCCAATGATGTTTCTCAAAACGAAAAATGGAAGTTTACCTGAGTTAACATTATACGATGATTTCAGACTTATGGGCGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAACTTCTCTCTACAAAGTCTCATGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAAGCATATAAGTTGTTCTGGCCGGAACGGTCAGAATTTGTGAGGATGGCAGCTAGATTTGGAGCCAAAATCGTACCTTTTGGTGCTGTTGGAGAAGATGATATTGGTGATCTACTTCTCGATTATGAAGACCAGATGAAAATTCCTTTCCTTAGGAAATCTATAGAGGACTTAACGGCTGAAGCTGCAAAAGTGAGGTCCACCGTTGATGGGGAGATTGGAAACCAAGCTATGCACCTTCCAGGAATTGTACCGAAATTTCCTGGCCGGTTTTATTATAAATTTGGGAAACCAATTGAAACAGCAGGGAGGAAGCAGGAATTAAGAGACAGGGAGAAAGCTCATGAACTATATTTGGAAGTAAAATCGGAGGTTGAGAAGTCCCTTGCTTATTTGCAGAAAAAAAGAGAAAGTGATCCTTACAGAAACCTCGCGGCTCGGTTACAATACCAGGCCATACACGGGTTTGCGTCTGAAGTTCCTTCATTTGACCTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

713

Amino Acids

78.83

Weight (kDa)

6.57

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_1	PF00561	174 - 381	7e-09	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	177 - 384	6.2e-08	Alpha/beta hydrolase family
Hydrolase_4	PF12146	193 - 380	3.6e-07	Serine aminopeptidase, S33
DAGAT	PF03982	507 - 584	5.8e-09	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1920
AatII	GACGTC	2 cut(s)	74, 161
AccB1I	GGYRCC	1 cut(s)	437
AccBSI	CCGCTC	3 cut(s)	42, 381, 409
AccII	CGCG	1 cut(s)	2075
AciI	CCGC	6 cut(s)	40, 375, 381, 407, 1119, 2075
AclWI	GGATC	3 cut(s)	525, 1031, 2051
AcoI	YGGCCR	4 cut(s)	123, 1120, 1661, 1906
AcsI	RAATTY	4 cut(s)	1676, 1782, 1898, 1922
AcuI	CTGAAG	3 cut(s)	688, 1842, 2136
AcyI	GRCGYC	2 cut(s)	71, 158
AfaI	GTAC	7 cut(s)	326, 335, 790, 964, 1105, 1716, 1893
AfiI	CCNNNNNNNGG	8 cut(s)	514, 658, 1135, 1355, 1553, 1639, 1851, 2103
AflIII	ACRYGT	1 cut(s)	1383
AgsI	TTSAA	7 cut(s)	722, 884, 1112, 1194, 1400, 1570, 1940
AjnI	CCWGG	5 cut(s)	424, 1606, 1882, 1903, 2091
AjuI	GAANNNNNNNTTGG	2 cut(s)	1728, 1760
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	5 cut(s)	496, 1197, 1555, 1593, 1962
AlwI	GGATC	3 cut(s)	525, 1031, 2051
Ama87I	CYCGRG	1 cut(s)	1552
AoxI	GGCC	7 cut(s)	3, 123, 448, 1120, 1661, 1906, 2094
ApeKI	GCWGC	4 cut(s)	36, 647, 1691, 1826
ApoI	RAATTY	4 cut(s)	1676, 1782, 1898, 1922
ArsI	GACNNNNNNTTYG	2 cut(s)	1823, 1855
Asp700I	GAANNNNTTC	2 cut(s)	936, 1404
AspLEI	GCGC	1 cut(s)	1541
AspS9I	GGNCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
AsuC2I	CCSGG	2 cut(s)	659, 1342
AsuHPI	GGTGA	8 cut(s)	69, 254, 576, 705, 1224, 1426, 1622, 1760
AsuII	TTCGAA	1 cut(s)	1428
AvaI	CYCGRG	1 cut(s)	1552
AvaII	GGWCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
AxyI	CCTNAGG	2 cut(s)	513, 1793
BalI	TGGCCA	1 cut(s)	125
BanI	GGYRCC	1 cut(s)	437
BanII	GRGCYC	1 cut(s)	1292
BauI	CACGAG	1 cut(s)	493
BbsI	GAAGAC	5 cut(s)	66, 142, 296, 1119, 1776
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	4 cut(s)	23, 659, 1703, 1813
BccI	CCATC	6 cut(s)	428, 895, 1237, 1452, 1681, 1844
BceAI	ACGGC	3 cut(s)	180, 352, 1833
BciT130I	CCWGG	5 cut(s)	426, 1608, 1884, 1905, 2093
BciVI	GTATCC	1 cut(s)	1033
BclI	TGATCA	2 cut(s)	247, 957
BcnI	CCSGG	2 cut(s)	659, 1342
BcoDI	GTCTC	5 cut(s)	496, 1197, 1555, 1593, 1962
BfaI	CTAG	4 cut(s)	108, 813, 1050, 1695
BfmI	CTRYAG	3 cut(s)	740, 1350, 1803
BfoI	RGCGCY	1 cut(s)	1542
BfuI	GTATCC	1 cut(s)	1033
BisI	GCNGC	7 cut(s)	37, 40, 648, 1120, 1692, 1827, 2076
BlsI	GCNGC	7 cut(s)	38, 41, 649, 1121, 1693, 1828, 2077
Bme1390I	CCNGG	7 cut(s)	426, 659, 1342, 1608, 1884, 1905, 2093
Bme18I	GGWCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
BmeT110I	CYCGRG	1 cut(s)	1552
BmgT120I	GGNCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
BmiI	GGNNCC	5 cut(s)	385, 386, 439, 1359, 1705
BmrFI	CCNGG	7 cut(s)	426, 659, 1342, 1608, 1884, 1905, 2093
BmrI	ACTGGG	2 cut(s)	1286, 1400
BmsI	GCATC	5 cut(s)	263, 469, 568, 1132, 1287
BmuI	ACTGGG	2 cut(s)	1286, 1400
BpiI	GAAGAC	5 cut(s)	66, 142, 296, 1119, 1776
BpmI	CTGGAG	3 cut(s)	129, 248, 839
Bpu14I	TTCGAA	1 cut(s)	1428
BpuEI	CTTGAG	1 cut(s)	692
BpuMI	CCSGG	2 cut(s)	659, 1342
BsaHI	GRCGYC	2 cut(s)	71, 158
BsaI	GGTCTC	1 cut(s)	496
BsaJI	CCNNGG	3 cut(s)	207, 297, 1410
BsaWI	WCCGGW	2 cut(s)	440, 1632
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	8 cut(s)	514, 658, 1135, 1355, 1553, 1639, 1851, 2103
Bse118I	RCCGGY	1 cut(s)	1908
Bse1I	ACTGG	7 cut(s)	146, 280, 322, 346, 1026, 1292, 1395
Bse21I	CCTNAGG	2 cut(s)	513, 1793
Bse3DI	GCAATG	2 cut(s)	810, 1040
BseBI	CCWGG	5 cut(s)	426, 1608, 1884, 1905, 2093
BseDI	CCNNGG	3 cut(s)	207, 297, 1410
BseGI	GGATG	3 cut(s)	698, 1462, 1692
BseLI	CCNNNNNNNGG	8 cut(s)	514, 658, 1135, 1355, 1553, 1639, 1851, 2103
BseMI	GCAATG	2 cut(s)	810, 1040
BseMII	CTCAG	3 cut(s)	322, 776, 1494
BseNI	ACTGG	7 cut(s)	146, 280, 322, 346, 1026, 1292, 1395
BseRI	GAGGAG	1 cut(s)	14
BseXI	GCAGC	4 cut(s)	23, 659, 1703, 1813
Bsh1236I	CGCG	1 cut(s)	2075
Bsh1285I	CGRYCG	1 cut(s)	592
BshFI	GGCC	7 cut(s)	5, 125, 450, 1122, 1663, 1908, 2096
BshNI	GGYRCC	1 cut(s)	437
BsiEI	CGRYCG	1 cut(s)	592
BsiHKAI	GWGCWC	1 cut(s)	219
BsiHKCI	CYCGRG	1 cut(s)	1552
BsiSI	CCGG	6 cut(s)	441, 659, 1341, 1633, 1664, 1909
BsiWI	CGTACG	1 cut(s)	1103
BslFI	GGGAC	3 cut(s)	397, 579, 2008
BslI	CCNNNNNNNGG	8 cut(s)	514, 658, 1135, 1355, 1553, 1639, 1851, 2103
BsmAI	GTCTC	5 cut(s)	496, 1197, 1555, 1593, 1962
BsmFI	GGGAC	3 cut(s)	397, 579, 2008
BsnI	GGCC	7 cut(s)	5, 125, 450, 1122, 1663, 1908, 2096
Bso31I	GGTCTC	1 cut(s)	496
BsoBI	CYCGRG	1 cut(s)	1552
Bsp119I	TTCGAA	1 cut(s)	1428
Bsp1286I	GDGCHC	2 cut(s)	219, 1292
Bsp143I	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
BspACI	CCGC	6 cut(s)	40, 375, 381, 407, 1119, 2075
BspANI	GGCC	7 cut(s)	5, 125, 450, 1122, 1663, 1908, 2096
BspCNI	CTCAG	3 cut(s)	321, 777, 1495
BspFNI	CGCG	1 cut(s)	2075
BspHI	TCATGA	2 cut(s)	1284, 1984
BspLI	GGNNCC	5 cut(s)	385, 386, 439, 1359, 1705
BspMAI	CTGCAG	1 cut(s)	744
BspPI	GGATC	3 cut(s)	525, 1031, 2051
BspQI	GCTCTTC	3 cut(s)	207, 255, 1632
BspT104I	TTCGAA	1 cut(s)	1428
BspT107I	GGYRCC	1 cut(s)	437
BspTNI	GGTCTC	1 cut(s)	496
BsrBI	CCGCTC	3 cut(s)	42, 381, 409
BsrDI	GCAATG	2 cut(s)	810, 1040
BsrFI	RCCGGY	1 cut(s)	1908
BsrI	ACTGG	7 cut(s)	146, 280, 322, 346, 1026, 1292, 1395
BssAI	RCCGGY	1 cut(s)	1908
BssECI	CCNNGG	3 cut(s)	207, 297, 1410
BssMI	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
BssNI	GRCGYC	2 cut(s)	71, 158
BssSI	CACGAG	1 cut(s)	493
BssT1I	CCWWGG	2 cut(s)	297, 1410
Bst2BI	CACGAG	1 cut(s)	493
Bst2UI	CCWGG	5 cut(s)	426, 1608, 1884, 1905, 2093
Bst4CI	ACNGT	7 cut(s)	528, 856, 1015, 1162, 1425, 1671, 1846
Bst6I	CTCTTC	5 cut(s)	207, 255, 1027, 1136, 1632
BstACI	GRCGYC	2 cut(s)	71, 158
BstAPI	GCANNNNNTGC	2 cut(s)	632, 748
BstBI	TTCGAA	1 cut(s)	1428
BstC8I	GCNNGC	8 cut(s)	105, 267, 271, 294, 500, 628, 1082, 1086
BstDEI	CTNAG	7 cut(s)	308, 513, 538, 767, 785, 1503, 1793
BstF5I	GGATG	3 cut(s)	698, 1462, 1692
BstFNI	CGCG	1 cut(s)	2075
BstH2I	RGCGCY	1 cut(s)	1542
BstHHI	GCGC	1 cut(s)	1541
BstKTI	GATC	9 cut(s)	201, 250, 314, 520, 592, 960, 1039, 1753, 2059
BstMAI	GTCTC	5 cut(s)	496, 1197, 1555, 1593, 1962
BstMBI	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
BstMCI	CGRYCG	1 cut(s)	592
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 632, 692, 748, 809, 844, 1004, 1826
BstNI	CCWGG	5 cut(s)	426, 1608, 1884, 1905, 2093
BstNSI	RCATGY	2 cut(s)	630, 1387
BstSCI	CCNGG	7 cut(s)	424, 657, 1340, 1606, 1882, 1903, 2091
BstSFI	CTRYAG	3 cut(s)	740, 1350, 1803
BstUI	CGCG	1 cut(s)	2075
BstV1I	GCAGC	4 cut(s)	23, 659, 1703, 1813
BstV2I	GAAGAC	5 cut(s)	66, 142, 296, 1119, 1776
BstX2I	RGATCY	1 cut(s)	1036
BstXI	CCANNNNNNTGG	1 cut(s)	121
BstYI	RGATCY	1 cut(s)	1036
Bsu36I	CCTNAGG	2 cut(s)	513, 1793
BsuI	GTATCC	1 cut(s)	1033
BsuRI	GGCC	7 cut(s)	5, 125, 450, 1122, 1663, 1908, 2096
BtsCI	GGATG	3 cut(s)	698, 1462, 1692
BtsI	GCAGTG	1 cut(s)	842
BtsIMutI	CAGTG	4 cut(s)	339, 842, 1033, 1299
Cac8I	GCNNGC	8 cut(s)	105, 267, 271, 294, 500, 628, 1082, 1086
CciI	TCATGA	2 cut(s)	1284, 1984
CfoI	GCGC	1 cut(s)	1541
Cfr10I	RCCGGY	1 cut(s)	1908
Cfr13I	GGNCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
CseI	GACGC	1 cut(s)	2100
Csp6I	GTAC	7 cut(s)	325, 334, 789, 963, 1104, 1715, 1892
CviQI	GTAC	7 cut(s)	325, 334, 789, 963, 1104, 1715, 1892
DdeI	CTNAG	7 cut(s)	308, 513, 538, 767, 785, 1503, 1793
DpnI	GATC	9 cut(s)	200, 249, 313, 519, 591, 959, 1038, 1752, 2058
DpnII	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
EaeI	YGGCCR	4 cut(s)	123, 1120, 1661, 1906
Eam1104I	CTCTTC	5 cut(s)	207, 255, 1027, 1136, 1632
EarI	CTCTTC	5 cut(s)	207, 255, 1027, 1136, 1632
Eco130I	CCWWGG	2 cut(s)	297, 1410
Eco24I	GRGCYC	1 cut(s)	1292
Eco31I	GGTCTC	1 cut(s)	496
Eco32I	GATATC	2 cut(s)	664, 919
Eco47I	GGWCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
Eco57I	CTGAAG	3 cut(s)	688, 1842, 2136
Eco81I	CCTNAGG	2 cut(s)	513, 1793
Eco88I	CYCGRG	1 cut(s)	1552
EcoO109I	RGGNCCY	2 cut(s)	384, 1358
EcoRII	CCWGG	5 cut(s)	424, 1606, 1882, 1903, 2091
EcoRV	GATATC	2 cut(s)	664, 919
EcoT14I	CCWWGG	2 cut(s)	297, 1410
EcoT38I	GRGCYC	1 cut(s)	1292
ErhI	CCWWGG	2 cut(s)	297, 1410
FalI	AAGNNNNNCTT	2 cut(s)	2044, 2076
FaqI	GGGAC	3 cut(s)	397, 579, 2008
FauI	CCCGC	3 cut(s)	368, 374, 414
FauNDI	CATATG	1 cut(s)	976
FbaI	TGATCA	2 cut(s)	247, 957
Fnu4HI	GCNGC	7 cut(s)	37, 40, 648, 1120, 1692, 1827, 2076
FokI	GGATG	3 cut(s)	685, 1449, 1699
FriOI	GRGCYC	1 cut(s)	1292
Fsp4HI	GCNGC	7 cut(s)	37, 40, 648, 1120, 1692, 1827, 2076
FspBI	CTAG	4 cut(s)	108, 813, 1050, 1695
GlaI	GCGC	1 cut(s)	1540
GluI	GCNGC	7 cut(s)	37, 40, 648, 1120, 1692, 1827, 2076
GsuI	CTGGAG	3 cut(s)	129, 248, 839
HaeII	RGCGCY	1 cut(s)	1542
HaeIII	GGCC	7 cut(s)	5, 125, 450, 1122, 1663, 1908, 2096
HapII	CCGG	6 cut(s)	441, 659, 1341, 1633, 1664, 1909
HgaI	GACGC	1 cut(s)	2100
HhaI	GCGC	1 cut(s)	1541
Hin1I	GRCGYC	2 cut(s)	71, 158
Hin6I	GCGC	1 cut(s)	1539
HinP1I	GCGC	1 cut(s)	1539
HincII	GTYRAC	3 cut(s)	162, 1276, 1509
HindII	GTYRAC	3 cut(s)	162, 1276, 1509
HinfI	GANTC	7 cut(s)	182, 401, 614, 755, 1071, 1345, 1417
HpaI	GTTAAC	2 cut(s)	1276, 1509
HpaII	CCGG	6 cut(s)	441, 659, 1341, 1633, 1664, 1909
HphI	GGTGA	8 cut(s)	69, 254, 576, 705, 1224, 1426, 1622, 1760
Hpy166II	GTNNAC	5 cut(s)	162, 1276, 1499, 1509, 1842
Hpy8I	GTNNAC	5 cut(s)	162, 1276, 1499, 1509, 1842
Hpy99I	CGWCG	4 cut(s)	73, 160, 239, 1191
HpyAV	CCTTC	9 cut(s)	422, 712, 782, 817, 1055, 1245, 1630, 1889, 2133
HpyCH4III	ACNGT	7 cut(s)	528, 856, 1015, 1162, 1425, 1671, 1846
HpyCH4IV	ACGT	5 cut(s)	71, 158, 237, 1106, 1440
HpyCH4V	TGCA	8 cut(s)	502, 635, 742, 803, 1088, 1829, 1876, 2038
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 632, 692, 748, 809, 844, 1004, 1826
HpyF3I	CTNAG	7 cut(s)	308, 513, 538, 767, 785, 1503, 1793
HpySE526I	ACGT	5 cut(s)	71, 158, 237, 1106, 1440
Hsp92I	GRCGYC	2 cut(s)	71, 158
HspAI	GCGC	1 cut(s)	1539
KflI	GGGWCCC	1 cut(s)	384
Ksp22I	TGATCA	2 cut(s)	247, 957
KspAI	GTTAAC	2 cut(s)	1276, 1509
Kzo9I	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
LguI	GCTCTTC	3 cut(s)	207, 255, 1632
LmnI	GCTCC	5 cut(s)	47, 378, 414, 623, 1703
Lsp1109I	GCAGC	4 cut(s)	23, 659, 1703, 1813
LweI	GCATC	5 cut(s)	263, 469, 568, 1132, 1287
MaeI	CTAG	4 cut(s)	108, 813, 1050, 1695
MaeII	ACGT	5 cut(s)	71, 158, 237, 1106, 1440
MaeIII	GTNAC	4 cut(s)	711, 1386, 1414, 2082
MalI	GATC	9 cut(s)	200, 249, 313, 519, 591, 959, 1038, 1752, 2058
MbiI	CCGCTC	3 cut(s)	42, 381, 409
MboI	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
MfeI	CAATTG	1 cut(s)	1935
MflI	RGATCY	1 cut(s)	1036
MhlI	GDGCHC	2 cut(s)	219, 1292
MlsI	TGGCCA	1 cut(s)	125
MluNI	TGGCCA	1 cut(s)	125
MlyI	GAGTC	4 cut(s)	191, 749, 1065, 1411
MmeI	TCCRAC	7 cut(s)	33, 82, 417, 589, 811, 838, 1711
Mox20I	TGGCCA	1 cut(s)	125
MroXI	GAANNNNTTC	2 cut(s)	936, 1404
MscI	TGGCCA	1 cut(s)	125
MseI	TTAA	8 cut(s)	275, 654, 1245, 1275, 1508, 1814, 1964, 2140
MslI	CAYNNNNRTG	1 cut(s)	1283
Msp20I	TGGCCA	1 cut(s)	125
MspI	CCGG	6 cut(s)	441, 659, 1341, 1633, 1664, 1909
MspR9I	CCNGG	7 cut(s)	426, 659, 1342, 1608, 1884, 1905, 2093
MunI	CAATTG	1 cut(s)	1935
MvaI	CCWGG	5 cut(s)	426, 1608, 1884, 1905, 2093
MvnI	CGCG	1 cut(s)	2075
MwoI	GCNNNNNNNGC	8 cut(s)	11, 632, 692, 748, 809, 844, 1004, 1826
NciI	CCSGG	2 cut(s)	659, 1342
NdeI	CATATG	1 cut(s)	976
NdeII	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
NlaIV	GGNNCC	5 cut(s)	385, 386, 439, 1359, 1705
NmuCI	GTSAC	2 cut(s)	711, 1414
NspI	RCATGY	2 cut(s)	630, 1387
NspV	TTCGAA	1 cut(s)	1428
PaeI	GCATGC	1 cut(s)	630
PagI	TCATGA	2 cut(s)	1284, 1984
PciI	ACATGT	1 cut(s)	1383
PciSI	GCTCTTC	3 cut(s)	207, 255, 1632
PdmI	GAANNNNTTC	2 cut(s)	936, 1404
PfeI	GAWTC	3 cut(s)	401, 614, 1345
Pfl23II	CGTACG	1 cut(s)	1103
PfoI	TCCNGGA	1 cut(s)	1882
PkrI	GCNGC	7 cut(s)	38, 41, 649, 1121, 1693, 1828, 2077
Ple19I	CGATCG	1 cut(s)	592
PleI	GAGTC	4 cut(s)	190, 749, 1065, 1411
PpsI	GAGTC	4 cut(s)	190, 749, 1065, 1411
PpuMI	RGGWCCY	2 cut(s)	384, 1358
PscI	ACATGT	1 cut(s)	1383
PsiI	TTATAA	1 cut(s)	1920
Psp5II	RGGWCCY	2 cut(s)	384, 1358
Psp6I	CCWGG	5 cut(s)	424, 1606, 1882, 1903, 2091
PspGI	CCWGG	5 cut(s)	424, 1606, 1882, 1903, 2091
PspLI	CGTACG	1 cut(s)	1103
PspN4I	GGNNCC	5 cut(s)	385, 386, 439, 1359, 1705
PspPI	GGNCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
PspPPI	RGGWCCY	2 cut(s)	384, 1358
PstI	CTGCAG	1 cut(s)	744
PsuI	RGATCY	1 cut(s)	1036
PvuI	CGATCG	1 cut(s)	592
RsaI	GTAC	7 cut(s)	326, 335, 790, 964, 1105, 1716, 1893
RsaNI	GTAC	7 cut(s)	325, 334, 789, 963, 1104, 1715, 1892
RseI	CAYNNNNRTG	1 cut(s)	1283
SapI	GCTCTTC	3 cut(s)	207, 255, 1632
SaqAI	TTAA	8 cut(s)	275, 654, 1245, 1275, 1508, 1814, 1964, 2140
SatI	GCNGC	7 cut(s)	37, 40, 648, 1120, 1692, 1827, 2076
Sau3AI	GATC	9 cut(s)	198, 247, 311, 517, 589, 957, 1036, 1750, 2056
Sau96I	GGNCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
SchI	GAGTC	4 cut(s)	191, 749, 1065, 1411
ScrFI	CCNGG	7 cut(s)	426, 659, 1342, 1608, 1884, 1905, 2093
SduI	GDGCHC	2 cut(s)	219, 1292
SfaNI	GCATC	5 cut(s)	263, 469, 568, 1132, 1287
SfcI	CTRYAG	3 cut(s)	740, 1350, 1803
SfuI	TTCGAA	1 cut(s)	1428
SinI	GGWCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
SmiMI	CAYNNNNRTG	1 cut(s)	1283
SmlI	CTYRAG	1 cut(s)	671
SmoI	CTYRAG	1 cut(s)	671
SphI	GCATGC	1 cut(s)	630
SsiI	CCGC	6 cut(s)	40, 375, 381, 407, 1119, 2075
SspMI	CTAG	4 cut(s)	108, 813, 1050, 1695
StyD4I	CCNGG	7 cut(s)	424, 657, 1340, 1606, 1882, 1903, 2091
StyI	CCWWGG	2 cut(s)	297, 1410
TaaI	ACNGT	7 cut(s)	528, 856, 1015, 1162, 1425, 1671, 1846
TaiI	ACGT	5 cut(s)	74, 161, 240, 1109, 1443
TaqI	TCGA	4 cut(s)	520, 666, 1428, 1761
TaqII	GACCGA	1 cut(s)	221
TatI	WGTACW	2 cut(s)	788, 962
TauI	GCSGC	3 cut(s)	42, 1122, 2078
TfiI	GAWTC	3 cut(s)	401, 614, 1345
Tru1I	TTAA	8 cut(s)	275, 654, 1245, 1275, 1508, 1814, 1964, 2140
Tru9I	TTAA	8 cut(s)	275, 654, 1245, 1275, 1508, 1814, 1964, 2140
TscAI	CASTG	4 cut(s)	346, 849, 1033, 1299
TseFI	GTSAC	2 cut(s)	711, 1414
TseI	GCWGC	4 cut(s)	36, 647, 1691, 1826
Tsp45I	GTSAC	2 cut(s)	711, 1414
TspDTI	ATGAA	6 cut(s)	78, 736, 1782, 1793, 2001, 2115
TspGWI	ACGGA	2 cut(s)	1091, 1332
TspRI	CASTG	4 cut(s)	346, 849, 1033, 1299
VpaK11BI	GGWCC	6 cut(s)	96, 111, 384, 1099, 1358, 1839
XapI	RAATTY	4 cut(s)	1676, 1782, 1898, 1922
XceI	RCATGY	2 cut(s)	630, 1387
XmnI	GAANNNNTTC	2 cut(s)	936, 1404
XspI	CTAG	4 cut(s)	108, 813, 1050, 1695
ZraI	GACGTC	2 cut(s)	72, 159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.