Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Forward (+)

13203942 .. 13208943

Gene Structure 5002 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00010480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGAGGATCATGATCATCGTCATGGACATGTAGAGGACGAGCGGGTGAGATTCAAACATTTTATTGAGCAAGCTAAGGATCTTGTCAGACCAGACAGCAGTACTTCTGCACCGTCACCTCGCTGGTTCTCACCTTTAGACTGCGGCCCCCCATTGGAAGATTCCCCCTGCTTCTCTTTTTGCCCGGTTCTTCCTCTTTCTGTGATATATATAGCATTGGCAATATGTGACTTAGTGAAGCTAATTGAGAGCACAATTCGGTCAGAGCATCATCGCTCACCTAATAGACCAATATATCTTGTTGGAGAATCGCTTGGAGCATGCCTTGCACTCTCTGTGGCAGCCTTTAACCCTGACATCGACCTTGTTCTAATTTTAGCAAATCCAGGTACCTGTTCTGCTTACGTAGGTGCAATGATGGATAATTTGGAGAAAGGAATTGAAAGGCTATCGCCGGATCTTGTTGCACCATCAATAGCTTACCTCTCTGTTATTGCTGATATCTTTCCCATGGAAACACTTGTATGGAAGCTACAAATGATTAGTTCAGCTTCTTCTTATGCCAATTCACACCTCCATGCTGTGAAGGCTCAAACCCTGATACTGTCCAGCGGAAGGGATCCATTGCTACCTAGTCATGAGGAAGGTCCAAGACTACGATGGCTGCTGGCAAATTGTGAGATCTGTACTTTTGAAGACTGCGGTCATTTCCTCTTCTTGGAAGCTGCTCATGATTTGGTAACTGTCATCAAGCAGGTTGGTGTCTATCGTCGTTCAAAAGAAAGAGACTTTGTTTCAGATTACATACCATTATCACCTTCTGAATTAAAAAATGTATTGGACAAACACAGATGGATTAGCACAGTCATGAGCCCAGTTGTACTCTCAACTTTAGCAGATGGGAAGATAGTGAGGGGCTTTGCCGGGATTCCTTTACAGGGCCCTGTAGTGTATGTTGGTTATCACATGTTACTGGGATCTGAACTCTTTCCATTGGTAACGCTATTTTCGGAACAAAATAACATCCCTCTGAGAGGTTTAGCACATCCAGTGATGTTTATGAAATTGAATCAAGGATGGTTACCTGAGCATATGTTCGACGATCTCAAACATTTGGGGGCTGTTCCTGTTTCCGGAAAAAACTTTTTTAAGCTTCTCTCTACAAAGTCTCATTTCCTACTCTTTCCTGGTGGATTGCGGGAGGCTTTACACCGGAAGGGGGAAGCATATAAGTTATTCTGGCCGGAAAGGGCAGAGTTTGTGAGGATGGCAGCTAGATTTGGCGCGAAGATCGTACCTTTCGGTACAGTTGGAGAGGATGATTTTGCTGACATATTATTCGATTATGAAGACCAGATGAAAATTCCATTCCTCAAGAAATATATAGATGAATTATCGAATAAATTAACTGGAAAAGTGAGGGAAACTTCTGAGGGGGAGGTAGGAAACCAACCTTTATACTTGCCAGGAATGCTACCAAAATTTCCTGGCCGGTTTTATCATCATTTTGGGAAACCAATTGAAACAGAAGGAAAAAGAGAGAGTGATCCATACAGAAGCCTTGTGTCTCGGATACTATACCAAGCCACAAATGGCTTTACAGCTCAAGTTCCTACATTTGACGTGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

543

Amino Acids

60.93

Weight (kDa)

6.1

Isoelectric Point (pI)

45.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_6	PF12697	77 - 247	5.9e-08	Alpha/beta hydrolase family
DAGAT	PF03982	371 - 443	4.2e-07	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	745
Acc65I	GGTACC	1 cut(s)	389
AccB1I	GGYRCC	1 cut(s)	389
AccBSI	CCGCTC	1 cut(s)	43
AccII	CGCG	1 cut(s)	1286
AccIII	TCCGGA	1 cut(s)	1133
AciI	CCGC	5 cut(s)	43, 144, 612, 702, 1198
AclWI	GGATC	7 cut(s)	15, 87, 465, 614, 627, 985, 1541
AcoI	YGGCCR	2 cut(s)	1241, 1489
AcsI	RAATTY	2 cut(s)	1362, 1481
AfaI	GTAC	6 cut(s)	103, 391, 688, 882, 1296, 1306
AfiI	CCNNNNNNNGG	7 cut(s)	154, 615, 718, 938, 1034, 1133, 1219
AflIII	ACRYGT	2 cut(s)	28, 966
AgsI	TTSAA	6 cut(s)	55, 443, 695, 777, 1069, 1523
AjiI	CACGTC	1 cut(s)	1624
AjnI	CCWGG	4 cut(s)	385, 1186, 1465, 1486
AluBI	AGCT	9 cut(s)	74, 241, 479, 532, 551, 725, 1153, 1274, 1604
AluI	AGCT	9 cut(s)	74, 241, 479, 532, 551, 725, 1153, 1274, 1604
Alw21I	GWGCWC	1 cut(s)	254
Alw26I	GTCTC	3 cut(s)	780, 1173, 1572
AlwI	GGATC	7 cut(s)	15, 87, 465, 614, 627, 985, 1541
Aor13HI	TCCGGA	1 cut(s)	1133
AoxI	GGCC	4 cut(s)	145, 940, 1241, 1489
ApaI	GGGCCC	1 cut(s)	944
ApeKI	GCWGC	4 cut(s)	341, 664, 725, 1271
ApoI	RAATTY	2 cut(s)	1362, 1481
ArsI	GACNNNNNNTTYG	2 cut(s)	1322, 1354
Asp700I	GAANNNNTTC	1 cut(s)	987
Asp718I	GGTACC	1 cut(s)	389
AspLEI	GCGC	1 cut(s)	1286
AspS9I	GGNCC	4 cut(s)	146, 647, 940, 941
AsuC2I	CCSGG	2 cut(s)	185, 925
AsuHPI	GGTGA	5 cut(s)	58, 108, 123, 270, 807
AvaII	GGWCC	1 cut(s)	647
BaeGI	GKGCMC	1 cut(s)	944
BamHI	GGATCC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	389
BanII	GRGCYC	2 cut(s)	875, 944
BbsI	GAAGAC	2 cut(s)	702, 1356
Bbv12I	GWGCWC	1 cut(s)	254
BbvI	GCAGC	4 cut(s)	353, 651, 712, 1283
BccI	CCATC	7 cut(s)	412, 478, 654, 846, 893, 1071, 1261
BciT130I	CCWGG	4 cut(s)	387, 1188, 1467, 1488
BciVI	GTATCC	1 cut(s)	1566
BclI	TGATCA	1 cut(s)	13
BcnI	CCSGG	2 cut(s)	185, 925
BcoDI	GTCTC	3 cut(s)	780, 1173, 1572
BfaI	CTAG	2 cut(s)	633, 1275
BfmI	CTRYAG	1 cut(s)	945
BfuAI	ACCTGC	1 cut(s)	745
BfuI	GTATCC	1 cut(s)	1566
BglII	AGATCT	1 cut(s)	681
BisI	GCNGC	5 cut(s)	145, 342, 665, 726, 1272
BlsI	GCNGC	5 cut(s)	146, 343, 666, 727, 1273
BmcAI	AGTACT	1 cut(s)	103
Bme1390I	CCNGG	6 cut(s)	185, 387, 925, 1188, 1467, 1488
Bme18I	GGWCC	1 cut(s)	647
BmgBI	CACGTC	1 cut(s)	1624
BmgT120I	GGNCC	4 cut(s)	146, 647, 940, 941
BmiI	GGNNCC	4 cut(s)	148, 391, 621, 942
BmrFI	CCNGG	6 cut(s)	185, 387, 925, 1188, 1467, 1488
BmrI	ACTGGG	2 cut(s)	869, 983
BmsI	GCATC	1 cut(s)	277
BmuI	ACTGGG	2 cut(s)	869, 983
BoxI	GACNNNNGTC	1 cut(s)	702
BpiI	GAAGAC	2 cut(s)	702, 1356
Bpu10I	CCTNAGC	2 cut(s)	75, 1086
BpuEI	CTTGAG	2 cut(s)	1358, 1590
BpuMI	CCSGG	2 cut(s)	185, 925
BsaAI	YACGTR	1 cut(s)	406
BsaBI	GATNNNNATC	1 cut(s)	12
BsaJI	CCNNGG	1 cut(s)	510
BsaWI	WCCGGW	2 cut(s)	1133, 1212
Bsc4I	CCNNNNNNNGG	7 cut(s)	154, 615, 718, 938, 1034, 1133, 1219
Bse118I	RCCGGY	1 cut(s)	1491
Bse1I	ACTGG	4 cut(s)	875, 978, 1049, 1414
Bse3DI	GCAATG	2 cut(s)	420, 623
Bse8I	GATNNNNATC	1 cut(s)	12
BseAI	TCCGGA	1 cut(s)	1133
BseBI	CCWGG	4 cut(s)	387, 1188, 1467, 1488
BseDI	CCNNGG	1 cut(s)	510
BseGI	GGATG	5 cut(s)	1023, 1045, 1082, 1272, 1324
BseJI	GATNNNNATC	1 cut(s)	12
BseLI	CCNNNNNNNGG	7 cut(s)	154, 615, 718, 938, 1034, 1133, 1219
BseMI	GCAATG	2 cut(s)	420, 623
BseMII	CTCAG	3 cut(s)	1022, 1077, 1422
BseNI	ACTGG	4 cut(s)	875, 978, 1049, 1414
BseSI	GKGCMC	1 cut(s)	944
BseXI	GCAGC	4 cut(s)	353, 651, 712, 1283
BsgI	GTGCAG	1 cut(s)	93
Bsh1236I	CGCG	1 cut(s)	1286
BshFI	GGCC	4 cut(s)	147, 942, 1243, 1491
BshNI	GGYRCC	1 cut(s)	389
BsiHKAI	GWGCWC	1 cut(s)	254
BsiSI	CCGG	7 cut(s)	185, 455, 924, 1134, 1213, 1244, 1492
BslI	CCNNNNNNNGG	7 cut(s)	154, 615, 718, 938, 1034, 1133, 1219
BsmAI	GTCTC	3 cut(s)	780, 1173, 1572
BsmI	GAATGC	1 cut(s)	1476
BsnI	GGCC	4 cut(s)	147, 942, 1243, 1491
Bsp120I	GGGCCC	1 cut(s)	940
Bsp1286I	GDGCHC	3 cut(s)	254, 875, 944
Bsp13I	TCCGGA	1 cut(s)	1133
Bsp19I	CCATGG	1 cut(s)	510
BspACI	CCGC	5 cut(s)	43, 144, 612, 702, 1198
BspANI	GGCC	4 cut(s)	147, 942, 1243, 1491
BspCNI	CTCAG	3 cut(s)	1023, 1078, 1423
BspEI	TCCGGA	1 cut(s)	1133
BspFNI	CGCG	1 cut(s)	1286
BspHI	TCATGA	4 cut(s)	10, 637, 730, 867
BspLI	GGNNCC	4 cut(s)	148, 391, 621, 942
BspMI	ACCTGC	1 cut(s)	745
BspPI	GGATC	7 cut(s)	15, 87, 465, 614, 627, 985, 1541
BspT107I	GGYRCC	1 cut(s)	389
BsrBI	CCGCTC	1 cut(s)	43
BsrDI	GCAATG	2 cut(s)	420, 623
BsrFI	RCCGGY	1 cut(s)	1491
BsrI	ACTGG	4 cut(s)	875, 978, 1049, 1414
BssAI	RCCGGY	1 cut(s)	1491
BssECI	CCNNGG	1 cut(s)	510
BssT1I	CCWWGG	1 cut(s)	510
Bst2UI	CCWGG	4 cut(s)	387, 1188, 1467, 1488
Bst4CI	ACNGT	5 cut(s)	114, 606, 745, 865, 1309
Bst6I	CTCTTC	1 cut(s)	719
BstAPI	GCANNNNNTGC	1 cut(s)	326
BstBAI	YACGTR	1 cut(s)	406
BstC8I	GCNNGC	3 cut(s)	72, 322, 669
BstDEI	CTNAG	5 cut(s)	75, 232, 1031, 1086, 1431
BstDSI	CCRYGG	1 cut(s)	510
BstEII	GGTNACC	1 cut(s)	1080
BstENI	CCTNNNNNAGG	1 cut(s)	1032
BstF5I	GGATG	5 cut(s)	1023, 1045, 1082, 1272, 1324
BstFNI	CGCG	1 cut(s)	1286
BstHHI	GCGC	1 cut(s)	1286
BstMAI	GTCTC	3 cut(s)	780, 1173, 1572
BstMWI	GCNNNNNNNGC	3 cut(s)	326, 587, 1471
BstNI	CCWGG	4 cut(s)	387, 1188, 1467, 1488
BstNSI	RCATGY	3 cut(s)	32, 324, 970
BstPAI	GACNNNNGTC	1 cut(s)	702
BstPI	GGTNACC	1 cut(s)	1080
BstSCI	CCNGG	6 cut(s)	183, 385, 923, 1186, 1465, 1486
BstSFI	CTRYAG	1 cut(s)	945
BstSLI	GKGCMC	1 cut(s)	944
BstSNI	TACGTA	1 cut(s)	406
BstUI	CGCG	1 cut(s)	1286
BstV1I	GCAGC	4 cut(s)	353, 651, 712, 1283
BstV2I	GAAGAC	2 cut(s)	702, 1356
BstX2I	RGATCY	5 cut(s)	79, 457, 619, 681, 977
BstYI	RGATCY	5 cut(s)	79, 457, 619, 681, 977
BsuI	GTATCC	1 cut(s)	1566
BsuRI	GGCC	4 cut(s)	147, 942, 1243, 1491
BtgI	CCRYGG	1 cut(s)	510
BtgZI	GCGATG	1 cut(s)	257
BtrI	CACGTC	1 cut(s)	1624
BtsCI	GGATG	5 cut(s)	1023, 1045, 1082, 1272, 1324
BtsIMutI	CAGTG	1 cut(s)	1056
BveI	ACCTGC	1 cut(s)	745
Cac8I	GCNNGC	3 cut(s)	72, 322, 669
CciI	TCATGA	4 cut(s)	10, 637, 730, 867
CfoI	GCGC	1 cut(s)	1286
Cfr10I	RCCGGY	1 cut(s)	1491
Cfr13I	GGNCC	4 cut(s)	146, 647, 940, 941
Csp6I	GTAC	6 cut(s)	102, 390, 687, 881, 1295, 1305
CviQI	GTAC	6 cut(s)	102, 390, 687, 881, 1295, 1305
DdeI	CTNAG	5 cut(s)	75, 232, 1031, 1086, 1431
EaeI	YGGCCR	2 cut(s)	1241, 1489
Eam1104I	CTCTTC	1 cut(s)	719
EarI	CTCTTC	1 cut(s)	719
Eco105I	TACGTA	1 cut(s)	406
Eco130I	CCWWGG	1 cut(s)	510
Eco24I	GRGCYC	2 cut(s)	875, 944
Eco32I	GATATC	1 cut(s)	502
Eco47I	GGWCC	1 cut(s)	647
Eco91I	GGTNACC	1 cut(s)	1080
EcoNI	CCTNNNNNAGG	1 cut(s)	1032
EcoO109I	RGGNCCY	2 cut(s)	940, 941
EcoO65I	GGTNACC	1 cut(s)	1080
EcoRII	CCWGG	4 cut(s)	385, 1186, 1465, 1486
EcoRV	GATATC	1 cut(s)	502
EcoT14I	CCWWGG	1 cut(s)	510
EcoT38I	GRGCYC	2 cut(s)	875, 944
ErhI	CCWWGG	1 cut(s)	510
FauI	CCCGC	2 cut(s)	36, 1191
FauNDI	CATATG	1 cut(s)	1092
FbaI	TGATCA	1 cut(s)	13
Fnu4HI	GCNGC	5 cut(s)	145, 342, 665, 726, 1272
FokI	GGATG	5 cut(s)	1010, 1032, 1089, 1279, 1331
FriOI	GRGCYC	2 cut(s)	875, 944
Fsp4HI	GCNGC	5 cut(s)	145, 342, 665, 726, 1272
FspBI	CTAG	2 cut(s)	633, 1275
GlaI	GCGC	1 cut(s)	1285
GluI	GCNGC	5 cut(s)	145, 342, 665, 726, 1272
HaeIII	GGCC	4 cut(s)	147, 942, 1243, 1491
HapII	CCGG	7 cut(s)	185, 455, 924, 1134, 1213, 1244, 1492
HhaI	GCGC	1 cut(s)	1286
Hin6I	GCGC	1 cut(s)	1284
HinP1I	GCGC	1 cut(s)	1284
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	5 cut(s)	51, 161, 308, 928, 1069
HpaII	CCGG	7 cut(s)	185, 455, 924, 1134, 1213, 1244, 1492
HphI	GGTGA	5 cut(s)	58, 108, 123, 270, 807
Hpy188I	TCNGA	9 cut(s)	89, 265, 799, 823, 982, 1012, 1032, 1432, 1572
Hpy188III	TCNNGA	6 cut(s)	11, 638, 731, 868, 1134, 1375
Hpy99I	CGWCG	2 cut(s)	774, 1103
HpyAV	CCTTC	6 cut(s)	580, 609, 638, 828, 1210, 1523
HpyCH4III	ACNGT	5 cut(s)	114, 606, 745, 865, 1309
HpyCH4IV	ACGT	2 cut(s)	405, 1623
HpyCH4V	TGCA	4 cut(s)	110, 329, 413, 467
HpyF10VI	GCNNNNNNNGC	3 cut(s)	326, 587, 1471
HpyF3I	CTNAG	5 cut(s)	75, 232, 1031, 1086, 1431
HpySE526I	ACGT	2 cut(s)	405, 1623
HspAI	GCGC	1 cut(s)	1284
Kpn2I	TCCGGA	1 cut(s)	1133
KpnI	GGTACC	1 cut(s)	393
Ksp22I	TGATCA	1 cut(s)	13
LmnI	GCTCC	1 cut(s)	317
Lsp1109I	GCAGC	4 cut(s)	353, 651, 712, 1283
LweI	GCATC	1 cut(s)	277
MaeI	CTAG	2 cut(s)	633, 1275
MaeII	ACGT	2 cut(s)	405, 1623
MaeIII	GTNAC	6 cut(s)	114, 227, 739, 969, 997, 1080
MbiI	CCGCTC	1 cut(s)	43
MboII	GAAGA	8 cut(s)	170, 182, 546, 706, 707, 916, 1300, 1361
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	5 cut(s)	79, 457, 619, 681, 977
MhlI	GDGCHC	3 cut(s)	254, 875, 944
MmeI	TCCRAC	2 cut(s)	283, 1291
MroI	TCCGGA	1 cut(s)	1133
MroXI	GAANNNNTTC	1 cut(s)	987
MseI	TTAA	5 cut(s)	348, 827, 1149, 1406, 1630
MslI	CAYNNNNRTG	5 cut(s)	21, 27, 523, 576, 866
MspA1I	CMGCKG	1 cut(s)	612
MspI	CCGG	7 cut(s)	185, 455, 924, 1134, 1213, 1244, 1492
MspR9I	CCNGG	6 cut(s)	185, 387, 925, 1188, 1467, 1488
MunI	CAATTG	1 cut(s)	1518
Mva1269I	GAATGC	1 cut(s)	1476
MvaI	CCWGG	4 cut(s)	387, 1188, 1467, 1488
MvnI	CGCG	1 cut(s)	1286
MwoI	GCNNNNNNNGC	3 cut(s)	326, 587, 1471
NciI	CCSGG	2 cut(s)	185, 925
NcoI	CCATGG	1 cut(s)	510
NdeI	CATATG	1 cut(s)	1092
NlaIV	GGNNCC	4 cut(s)	148, 391, 621, 942
NmuCI	GTSAC	2 cut(s)	114, 227
NspI	RCATGY	3 cut(s)	32, 324, 970
PaeI	GCATGC	1 cut(s)	324
PagI	TCATGA	4 cut(s)	10, 637, 730, 867
PciI	ACATGT	2 cut(s)	28, 966
PctI	GAATGC	1 cut(s)	1476
PdmI	GAANNNNTTC	1 cut(s)	987
PfeI	GAWTC	5 cut(s)	51, 161, 308, 928, 1069
PkrI	GCNGC	5 cut(s)	146, 343, 666, 727, 1273
Ppu21I	YACGTR	1 cut(s)	406
PscI	ACATGT	2 cut(s)	28, 966
PshAI	GACNNNNGTC	1 cut(s)	702
Psp6I	CCWGG	4 cut(s)	385, 1186, 1465, 1486
PspEI	GGTNACC	1 cut(s)	1080
PspGI	CCWGG	4 cut(s)	385, 1186, 1465, 1486
PspN4I	GGNNCC	4 cut(s)	148, 391, 621, 942
PspOMI	GGGCCC	1 cut(s)	940
PspPI	GGNCC	4 cut(s)	146, 647, 940, 941
PsuI	RGATCY	5 cut(s)	79, 457, 619, 681, 977
RsaI	GTAC	6 cut(s)	103, 391, 688, 882, 1296, 1306
RsaNI	GTAC	6 cut(s)	102, 390, 687, 881, 1295, 1305
RseI	CAYNNNNRTG	5 cut(s)	21, 27, 523, 576, 866
SaqAI	TTAA	5 cut(s)	348, 827, 1149, 1406, 1630
SatI	GCNGC	5 cut(s)	145, 342, 665, 726, 1272
Sau96I	GGNCC	4 cut(s)	146, 647, 940, 941
ScaI	AGTACT	1 cut(s)	103
ScrFI	CCNGG	6 cut(s)	185, 387, 925, 1188, 1467, 1488
SduI	GDGCHC	3 cut(s)	254, 875, 944
SfaNI	GCATC	1 cut(s)	277
SfcI	CTRYAG	1 cut(s)	945
SinI	GGWCC	1 cut(s)	647
SmiMI	CAYNNNNRTG	5 cut(s)	21, 27, 523, 576, 866
SmlI	CTYRAG	2 cut(s)	1373, 1605
SmoI	CTYRAG	2 cut(s)	1373, 1605
SnaBI	TACGTA	1 cut(s)	406
SphI	GCATGC	1 cut(s)	324
SsiI	CCGC	5 cut(s)	43, 144, 612, 702, 1198
SspMI	CTAG	2 cut(s)	633, 1275
StyD4I	CCNGG	6 cut(s)	183, 385, 923, 1186, 1465, 1486
StyI	CCWWGG	1 cut(s)	510
TaaI	ACNGT	5 cut(s)	114, 606, 745, 865, 1309
TaiI	ACGT	2 cut(s)	408, 1626
TaqI	TCGA	4 cut(s)	360, 1098, 1341, 1397
TaqII	GACCGA	1 cut(s)	249
TatI	WGTACW	3 cut(s)	101, 686, 880
TauI	GCSGC	1 cut(s)	147
TfiI	GAWTC	5 cut(s)	51, 161, 308, 928, 1069
Tru1I	TTAA	5 cut(s)	348, 827, 1149, 1406, 1630
Tru9I	TTAA	5 cut(s)	348, 827, 1149, 1406, 1630
TscAI	CASTG	1 cut(s)	1056
TseFI	GTSAC	2 cut(s)	114, 227
TseI	GCWGC	4 cut(s)	341, 664, 725, 1271
Tsp45I	GTSAC	2 cut(s)	114, 227
TspDTI	ATGAA	4 cut(s)	1076, 1362, 1373, 1404
TspRI	CASTG	1 cut(s)	1056
VpaK11BI	GGWCC	1 cut(s)	647
XagI	CCTNNNNNAGG	1 cut(s)	1032
XapI	RAATTY	2 cut(s)	1362, 1481
XceI	RCATGY	3 cut(s)	32, 324, 970
XcmI	CCANNNNNNNNNTGG	2 cut(s)	657, 1589
XmnI	GAANNNNTTC	1 cut(s)	987
XspI	CTAG	2 cut(s)	633, 1275
ZrmI	AGTACT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.