Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

76504825 .. 76512736

Gene Structure 7912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34587

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGCCTCCAACGCCCTTCATCTCTTCCCCAGCCGCTTTTCATCCATTCTCCGATGTAATTTGACGTCGAGTTTCTCGATCAATCCTTCTAAGATGACCAGAAGGTTAGCCGTCTCCACACGCCGCACGTCTAGCATGACCGCAACTGGAGAGAACAAGAGCCAACCTTTGGAACAAGAGCGTGTGAGCTTAAAGAATTTTTTTGACCAAGCCAAGGATCTTGTCACATCAGATGTCGGACCACCTCACTGGTTCTCACCTTTAGACTGCGGTCACCCCTTACACAATTCCCCCTTGCTTCTCTTTTTGCCGGGAATTGATGGCACTGGACTTGGACTTATAATGCATCATCAGAAACTTGGAAAGATTTTTGAGGTCTTGTGCTTGCATATTCCTCCTAAGGATCGAACACCATTTACAGTGAAGCTGGTTGAGAGAACAATTCGATCAGAGCATCATCGGTCACCTAATAGACCTATATATCTTGTTGGAGAATCTCTTGGAGCATGCATTTCACTATCTGTGGCATCCCGTAACCCTGATATCGACCTTGTTCTAATTTTAGCAAATCCGGCAACGTCCTTCAGCAGGTCACCACTTCAACCCATATTACCATTACTGCAGTTCATGGCCAACTTACCCAATCATAGTCTTCCTCATGTAGTGAGTTCAACGGCAGGTGCAATGGCTGATTTAGATAAGGGAGTTGGTGTTGGGGCTGAGCTATTACTCACCTCCTTTGATCCAAGCTTGCTGCTTTATTATGCAACTGCTCTTCACAACTCCAATCTGCAGGTTCTTGCTGATATCTTACCAATACAAACACTTCTGTGGAAGCTAGAAATGATTAATTCAGCTTCACCGTATGCCAATTCACGCCTCCATGCTGTGAAAGCTCAAACGCTGATACTTTCCAGTGGAAGGGATCCATTGCTACCTAGTCAAAAGGAAGGTCTAAGACTCCAACGGCTGCTAGCGAATTGCGAGATCTGTACGTTTCAAGACTGCAGCCATTTCCTCTTCTTGGAAGATGCTTTTGATTTGGTAACTGTCATCAAGCAGGTTGGTGTCTATCGTCGTTCAAAAGAACGAGATTTTGTTTCGGATTACATACCACCATCCCCTTCCGAATTAAGAACTTTACGGGACAATAACAGGTGGGTCATACTTTCCCAGCCTAGATGGTGGATTAACATCATGAGCCCAGTGATGCTCTCAACTTTAGCAGATGGGACAATAGTGAGGGGCTTTGCTGGGATTCCATCAGAGGGTCCTGTATTACATTTGTGGGAACAAAAAGGCATCCATCTGCGAGGGATAGCACATCCAATGATGTTTATGAAATTGAAACAAGGAAATTTAGTTGAGTTACCCTTTTCCGACTATTTCAGACTGATGGGTGCTGTTCCTGTCTCGGGAAAAAACTTTTTCAAGCTACTCTCTACAAAGTCTCATATCTTACTGTATCCTGGTGGAATTCGTGAGGCTCTTCACAGAAAGGGGGAAGCATACATGTTATTCTGGCCAGAACGGTCAGAGTTTGTGAGGATGGCAGCTAGATTTGGAGCGAAAATCGTACCTTTTGGTACAGTTGGAGAAGATGATTTTTTTGACATATTACTCGATTATGAAGACCAGATGAAAATTCCTTTCCTCAAGAAATATATAGATGCATTATCGGATGAAGTTGGAAAGCTGAGGACTACCGTTGATGGGGAGGTAGGAAACCAAGATGTATACTTCCCAGGAATTCTACCAAAATATCCCGGCCGGTTTTATTATTTCTTTGGGAAAACAATTGAAACAGACGGGAGGAAGCAGGAATTACGAGACAGGCAGAAAGCCCAAGAGTTGTATTTACAAGTGAAATCAGAGGTTGAGAACTGCATTGCTTATTTGCAGGAAAAAAGAGAGAGTGATCCTTACAGAAGCCTTGTGTCTCGGCTACTCTTCCAGGCCAGACATGGCTTTACATCTGAAGTTCCTGCATTTGACCTCGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

667

Amino Acids

75.21

Weight (kDa)

8.7

Isoelectric Point (pI)

53.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase_4	PF12146	153 - 343	3.1e-09	Serine aminopeptidase, S33
DAGAT	PF03982	460 - 544	2.2e-09	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	341
AarI	CACCTGC	1 cut(s)	668
AatII	GACGTC	1 cut(s)	68
Acc36I	ACCTGC	4 cut(s)	579, 668, 784, 1051
AccB7I	CCANNNNNTGG	1 cut(s)	169
AccI	GTMKAC	1 cut(s)	1737
AciI	CCGC	4 cut(s)	34, 124, 141, 270
AclWI	GGATC	6 cut(s)	225, 411, 737, 920, 933, 1913
AcoI	YGGCCR	3 cut(s)	630, 1523, 1768
AcsI	RAATTY	5 cut(s)	196, 1357, 1476, 1644, 1749
AcuI	CTGAAG	2 cut(s)	568, 1998
AcyI	GRCGYC	1 cut(s)	65
AfaI	GTAC	3 cut(s)	994, 1578, 1588
AfiI	CCNNNNNNNGG	8 cut(s)	169, 214, 588, 921, 1024, 1268, 1415, 1713
AflIII	ACRYGT	1 cut(s)	1512
AgsI	TTSAA	7 cut(s)	602, 672, 1001, 1083, 1348, 1432, 1802
AjiI	CACGTC	1 cut(s)	129
AjnI	CCWGG	3 cut(s)	1468, 1744, 1953
AleI	CACNNNNGTG	1 cut(s)	829
Alw26I	GTCTC	5 cut(s)	118, 1417, 1455, 1824, 1944
AlwI	GGATC	6 cut(s)	225, 411, 737, 920, 933, 1913
Ama87I	CYCGRG	1 cut(s)	1414
AoxI	GGCC	5 cut(s)	3, 630, 1523, 1768, 1956
ApeKI	GCWGC	4 cut(s)	754, 970, 1008, 1553
ApoI	RAATTY	5 cut(s)	196, 1357, 1476, 1644, 1749
ArsI	GACNNNNNNTTYG	2 cut(s)	937, 969
AseI	ATTAAT	1 cut(s)	849
AspS9I	GGNCC	2 cut(s)	239, 1271
AsuC2I	CCSGG	2 cut(s)	312, 1767
AsuHPI	GGTGA	6 cut(s)	249, 266, 456, 585, 724, 852
AsuNHI	GCTAGC	1 cut(s)	973
AvaI	CYCGRG	1 cut(s)	1414
AvaII	GGWCC	2 cut(s)	239, 1271
AxyI	CCTNAGG	1 cut(s)	399
BalI	TGGCCA	2 cut(s)	632, 1525
BamHI	GGATCC	1 cut(s)	925
BanII	GRGCYC	1 cut(s)	1205
BbsI	GAAGAC	2 cut(s)	644, 1638
BbvCI	CCTCAGC	1 cut(s)	1697
BbvI	GCAGC	4 cut(s)	741, 957, 1020, 1565
BccI	CCATC	9 cut(s)	314, 1126, 1176, 1223, 1270, 1314, 1390, 1543, 1706
BceAI	ACGGC	3 cut(s)	95, 690, 983
BciT130I	CCWGG	3 cut(s)	1470, 1746, 1955
BciVI	GTATCC	1 cut(s)	1476
BcnI	CCSGG	2 cut(s)	312, 1767
BcoDI	GTCTC	5 cut(s)	118, 1417, 1455, 1824, 1944
BfaI	CTAG	6 cut(s)	132, 839, 939, 974, 1179, 1557
BfmI	CTRYAG	3 cut(s)	620, 791, 1006
BfuAI	ACCTGC	4 cut(s)	579, 668, 784, 1051
BfuI	GTATCC	1 cut(s)	1476
BglII	AGATCT	1 cut(s)	987
BisI	GCNGC	6 cut(s)	34, 124, 755, 971, 1009, 1554
BlpI	GCTNAGC	1 cut(s)	720
BlsI	GCNGC	6 cut(s)	35, 125, 756, 972, 1010, 1555
Bme1390I	CCNGG	5 cut(s)	312, 1470, 1746, 1767, 1955
Bme18I	GGWCC	2 cut(s)	239, 1271
BmeT110I	CYCGRG	1 cut(s)	1414
BmgBI	CACGTC	1 cut(s)	129
BmgT120I	GGNCC	2 cut(s)	239, 1271
BmiI	GGNNCC	2 cut(s)	927, 1272
BmrFI	CCNGG	5 cut(s)	312, 1470, 1746, 1767, 1955
BmrI	ACTGGG	1 cut(s)	1199
BmsI	GCATC	7 cut(s)	355, 463, 536, 1021, 1200, 1311, 1660
BmtI	GCTAGC	1 cut(s)	977
BmuI	ACTGGG	1 cut(s)	1199
BoxI	GACNNNNGTC	1 cut(s)	270
BpiI	GAAGAC	2 cut(s)	644, 1638
BpmI	CTGGAG	1 cut(s)	168
Bpu10I	CCTNAGC	1 cut(s)	1697
Bpu1102I	GCTNAGC	1 cut(s)	720
BpuEI	CTTGAG	1 cut(s)	1640
BpuMI	CCSGG	2 cut(s)	312, 1767
BsaBI	GATNNNNATC	1 cut(s)	1193
BsaHI	GRCGYC	1 cut(s)	65
BsaJI	CCNNGG	2 cut(s)	213, 1744
BsaXI	ACNNNNNCTCC	2 cut(s)	696, 726
Bsc4I	CCNNNNNNNGG	8 cut(s)	169, 214, 588, 921, 1024, 1268, 1415, 1713
Bse118I	RCCGGY	1 cut(s)	1770
Bse1I	ACTGG	5 cut(s)	151, 254, 331, 915, 1205
Bse21I	CCTNAGG	1 cut(s)	399
Bse3DI	GCAATG	3 cut(s)	690, 929, 1887
Bse8I	GATNNNNATC	1 cut(s)	1193
BseBI	CCWGG	3 cut(s)	1470, 1746, 1955
BseDI	CCNNGG	2 cut(s)	213, 1744
BseGI	GGATG	7 cut(s)	41, 527, 1118, 1302, 1324, 1554, 1687
BseJI	GATNNNNATC	1 cut(s)	1193
BseLI	CCNNNNNNNGG	8 cut(s)	169, 214, 588, 921, 1024, 1268, 1415, 1713
BseMI	GCAATG	3 cut(s)	690, 929, 1887
BseMII	CTCAG	2 cut(s)	711, 1688
BseNI	ACTGG	5 cut(s)	151, 254, 331, 915, 1205
BseX3I	CGGCCG	1 cut(s)	1768
BseXI	GCAGC	4 cut(s)	741, 957, 1020, 1565
BseYI	CCCAGC	3 cut(s)	29, 1173, 1253
Bsh1285I	CGRYCG	1 cut(s)	1771
BshFI	GGCC	5 cut(s)	5, 632, 1525, 1770, 1958
BsiEI	CGRYCG	1 cut(s)	1771
BsiHKCI	CYCGRG	1 cut(s)	1414
BsiSI	CCGG	4 cut(s)	311, 572, 1767, 1771
BslFI	GGGAC	2 cut(s)	1160, 1246
BslI	CCNNNNNNNGG	8 cut(s)	169, 214, 588, 921, 1024, 1268, 1415, 1713
BsmAI	GTCTC	5 cut(s)	118, 1417, 1455, 1824, 1944
BsmBI	CGTCTC	1 cut(s)	118
BsmFI	GGGAC	2 cut(s)	1160, 1246
BsnI	GGCC	5 cut(s)	5, 632, 1525, 1770, 1958
BsoBI	CYCGRG	1 cut(s)	1414
Bsp1286I	GDGCHC	1 cut(s)	1205
Bsp143I	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
Bsp1720I	GCTNAGC	1 cut(s)	720
BspACI	CCGC	4 cut(s)	34, 124, 141, 270
BspANI	GGCC	5 cut(s)	5, 632, 1525, 1770, 1958
BspCNI	CTCAG	2 cut(s)	712, 1689
BspHI	TCATGA	1 cut(s)	1197
BspLI	GGNNCC	2 cut(s)	927, 1272
BspMAI	CTGCAG	3 cut(s)	624, 795, 1010
BspMI	ACCTGC	4 cut(s)	579, 668, 784, 1051
BspOI	GCTAGC	1 cut(s)	977
BspPI	GGATC	6 cut(s)	225, 411, 737, 920, 933, 1913
BspQI	GCTCTTC	2 cut(s)	780, 1494
BsrDI	GCAATG	3 cut(s)	690, 929, 1887
BsrFI	RCCGGY	1 cut(s)	1770
BsrI	ACTGG	5 cut(s)	151, 254, 331, 915, 1205
BssAI	RCCGGY	1 cut(s)	1770
BssECI	CCNNGG	2 cut(s)	213, 1744
BssMI	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
BssNAI	GTATAC	1 cut(s)	1738
BssNI	GRCGYC	1 cut(s)	65
BssT1I	CCWWGG	1 cut(s)	213
Bst1107I	GTATAC	1 cut(s)	1738
Bst2UI	CCWGG	3 cut(s)	1470, 1746, 1955
Bst4CI	ACNGT	7 cut(s)	421, 864, 1051, 1464, 1533, 1591, 1708
Bst6I	CTCTTC	5 cut(s)	29, 780, 1025, 1494, 1955
BstACI	GRCGYC	1 cut(s)	65
BstC8I	GCNNGC	4 cut(s)	386, 508, 752, 975
BstDEI	CTNAG	5 cut(s)	90, 399, 720, 956, 1697
BstEII	GGTNACC	3 cut(s)	272, 462, 591
BstENI	CCTNNNNNAGG	1 cut(s)	586
BstF5I	GGATG	7 cut(s)	41, 527, 1118, 1302, 1324, 1554, 1687
BstKTI	GATC	8 cut(s)	81, 220, 406, 449, 745, 928, 990, 1921
BstMAI	GTCTC	5 cut(s)	118, 1417, 1455, 1824, 1944
BstMBI	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
BstMCI	CGRYCG	1 cut(s)	1771
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 132, 572, 893
BstNI	CCWGG	3 cut(s)	1470, 1746, 1955
BstNSI	RCATGY	2 cut(s)	510, 1516
BstPAI	GACNNNNGTC	1 cut(s)	270
BstPI	GGTNACC	3 cut(s)	272, 462, 591
BstSCI	CCNGG	5 cut(s)	310, 1468, 1744, 1765, 1953
BstSFI	CTRYAG	3 cut(s)	620, 791, 1006
BstV1I	GCAGC	4 cut(s)	741, 957, 1020, 1565
BstV2I	GAAGAC	2 cut(s)	644, 1638
BstX2I	RGATCY	3 cut(s)	217, 925, 987
BstXI	CCANNNNNNTGG	1 cut(s)	249
BstYI	RGATCY	3 cut(s)	217, 925, 987
BstZ17I	GTATAC	1 cut(s)	1738
BstZI	CGGCCG	1 cut(s)	1768
Bsu36I	CCTNAGG	1 cut(s)	399
BsuI	GTATCC	1 cut(s)	1476
BsuRI	GGCC	5 cut(s)	5, 632, 1525, 1770, 1958
BtrI	CACGTC	1 cut(s)	129
BtsCI	GGATG	7 cut(s)	41, 527, 1118, 1302, 1324, 1554, 1687
BtsIMutI	CAGTG	5 cut(s)	247, 324, 426, 922, 1212
BveI	ACCTGC	4 cut(s)	579, 668, 784, 1051
Cac8I	GCNNGC	4 cut(s)	386, 508, 752, 975
CciI	TCATGA	1 cut(s)	1197
Cfr10I	RCCGGY	1 cut(s)	1770
Cfr13I	GGNCC	2 cut(s)	239, 1271
Csp6I	GTAC	3 cut(s)	993, 1577, 1587
CviAII	CATG	8 cut(s)	136, 507, 628, 659, 884, 1198, 1513, 1964
CviQI	GTAC	3 cut(s)	993, 1577, 1587
DdeI	CTNAG	5 cut(s)	90, 399, 720, 956, 1697
DpnI	GATC	8 cut(s)	80, 219, 405, 448, 744, 927, 989, 1920
DpnII	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
EaeI	YGGCCR	3 cut(s)	630, 1523, 1768
EagI	CGGCCG	1 cut(s)	1768
Eam1104I	CTCTTC	5 cut(s)	29, 780, 1025, 1494, 1955
EarI	CTCTTC	5 cut(s)	29, 780, 1025, 1494, 1955
EclXI	CGGCCG	1 cut(s)	1768
Eco130I	CCWWGG	1 cut(s)	213
Eco24I	GRGCYC	1 cut(s)	1205
Eco32I	GATATC	2 cut(s)	544, 808
Eco47I	GGWCC	2 cut(s)	239, 1271
Eco52I	CGGCCG	1 cut(s)	1768
Eco57I	CTGAAG	2 cut(s)	568, 1998
Eco81I	CCTNAGG	1 cut(s)	399
Eco88I	CYCGRG	1 cut(s)	1414
Eco91I	GGTNACC	3 cut(s)	272, 462, 591
EcoNI	CCTNNNNNAGG	1 cut(s)	586
EcoO109I	RGGNCCY	1 cut(s)	1271
EcoO65I	GGTNACC	3 cut(s)	272, 462, 591
EcoRI	GAATTC	2 cut(s)	1476, 1749
EcoRII	CCWGG	3 cut(s)	1468, 1744, 1953
EcoRV	GATATC	2 cut(s)	544, 808
EcoT14I	CCWWGG	1 cut(s)	213
EcoT22I	ATGCAT	3 cut(s)	348, 512, 1675
EcoT38I	GRGCYC	1 cut(s)	1205
ErhI	CCWWGG	1 cut(s)	213
Esp3I	CGTCTC	1 cut(s)	118
FaeI	CATG	8 cut(s)	139, 510, 631, 662, 887, 1201, 1516, 1967
FaqI	GGGAC	2 cut(s)	1160, 1246
FatI	CATG	8 cut(s)	135, 506, 627, 658, 883, 1197, 1512, 1963
FblI	GTMKAC	1 cut(s)	1737
Fnu4HI	GCNGC	6 cut(s)	34, 124, 755, 971, 1009, 1554
FokI	GGATG	7 cut(s)	28, 514, 1105, 1289, 1311, 1561, 1694
FriOI	GRGCYC	1 cut(s)	1205
Fsp4HI	GCNGC	6 cut(s)	34, 124, 755, 971, 1009, 1554
FspBI	CTAG	6 cut(s)	132, 839, 939, 974, 1179, 1557
GluI	GCNGC	6 cut(s)	34, 124, 755, 971, 1009, 1554
GsaI	CCCAGC	3 cut(s)	33, 1177, 1257
GsuI	CTGGAG	1 cut(s)	168
HaeIII	GGCC	5 cut(s)	5, 632, 1525, 1770, 1958
HapII	CCGG	4 cut(s)	311, 572, 1767, 1771
Hin1I	GRCGYC	1 cut(s)	65
Hin1II	CATG	8 cut(s)	139, 510, 631, 662, 887, 1201, 1516, 1967
HindIII	AAGCTT	1 cut(s)	748
HinfI	GANTC	3 cut(s)	494, 960, 1258
HpaII	CCGG	4 cut(s)	311, 572, 1767, 1771
HphI	GGTGA	6 cut(s)	249, 266, 456, 585, 724, 852
Hpy166II	GTNNAC	1 cut(s)	1738
Hpy188III	TCNNGA	6 cut(s)	76, 1001, 1198, 1416, 1481, 1657
Hpy8I	GTNNAC	1 cut(s)	1738
Hpy99I	CGWCG	2 cut(s)	70, 1080
HpyAV	CCTTC	7 cut(s)	26, 96, 96, 592, 915, 944, 1134
HpyCH4III	ACNGT	7 cut(s)	421, 864, 1051, 1464, 1533, 1591, 1708
HpyCH4IV	ACGT	4 cut(s)	65, 128, 578, 995
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 132, 572, 893
HpyF3I	CTNAG	5 cut(s)	90, 399, 720, 956, 1697
HpySE526I	ACGT	4 cut(s)	65, 128, 578, 995
Hsp92I	GRCGYC	1 cut(s)	65
Hsp92II	CATG	8 cut(s)	139, 510, 631, 662, 887, 1201, 1516, 1967
Kzo9I	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
LguI	GCTCTTC	2 cut(s)	780, 1494
LmnI	GCTCC	2 cut(s)	503, 1565
Lsp1109I	GCAGC	4 cut(s)	741, 957, 1020, 1565
LweI	GCATC	7 cut(s)	355, 463, 536, 1021, 1200, 1311, 1660
MaeI	CTAG	6 cut(s)	132, 839, 939, 974, 1179, 1557
MaeII	ACGT	4 cut(s)	65, 128, 578, 995
MaeIII	GTNAC	7 cut(s)	223, 272, 462, 533, 591, 1045, 1368
MalI	GATC	8 cut(s)	80, 219, 405, 448, 744, 927, 989, 1920
MboI	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
MboII	GAAGA	9 cut(s)	16, 644, 767, 1012, 1040, 1481, 1610, 1643, 1942
MfeI	CAATTG	1 cut(s)	1797
MflI	RGATCY	3 cut(s)	217, 925, 987
MhlI	GDGCHC	1 cut(s)	1205
MlsI	TGGCCA	2 cut(s)	632, 1525
MluNI	TGGCCA	2 cut(s)	632, 1525
MlyI	GAGTC	1 cut(s)	954
MmeI	TCCRAC	7 cut(s)	33, 217, 469, 988, 1404, 1573, 1669
Mox20I	TGGCCA	2 cut(s)	632, 1525
Mph1103I	ATGCAT	3 cut(s)	348, 512, 1675
MscI	TGGCCA	2 cut(s)	632, 1525
MseI	TTAA	5 cut(s)	191, 849, 1133, 1191, 2002
MslI	CAYNNNNRTG	1 cut(s)	829
Msp20I	TGGCCA	2 cut(s)	632, 1525
MspI	CCGG	4 cut(s)	311, 572, 1767, 1771
MspR9I	CCNGG	5 cut(s)	312, 1470, 1746, 1767, 1955
MunI	CAATTG	1 cut(s)	1797
MvaI	CCWGG	3 cut(s)	1470, 1746, 1955
MwoI	GCNNNNNNNGC	4 cut(s)	11, 132, 572, 893
NciI	CCSGG	2 cut(s)	312, 1767
NdeII	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
NheI	GCTAGC	1 cut(s)	973
NlaIII	CATG	8 cut(s)	139, 510, 631, 662, 887, 1201, 1516, 1967
NlaIV	GGNNCC	2 cut(s)	927, 1272
NmeAIII	GCCGAG	1 cut(s)	1921
NmuCI	GTSAC	4 cut(s)	223, 272, 462, 591
NsiI	ATGCAT	3 cut(s)	348, 512, 1675
NspI	RCATGY	2 cut(s)	510, 1516
OliI	CACNNNNGTG	1 cut(s)	829
PaeI	GCATGC	1 cut(s)	510
PagI	TCATGA	1 cut(s)	1197
PaqCI	CACCTGC	1 cut(s)	668
PciI	ACATGT	1 cut(s)	1512
PciSI	GCTCTTC	2 cut(s)	780, 1494
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PfeI	GAWTC	2 cut(s)	494, 1258
PflMI	CCANNNNNTGG	1 cut(s)	169
PkrI	GCNGC	6 cut(s)	35, 125, 756, 972, 1010, 1555
PleI	GAGTC	1 cut(s)	954
PpsI	GAGTC	1 cut(s)	954
PpuMI	RGGWCCY	1 cut(s)	1271
PscI	ACATGT	1 cut(s)	1512
PshAI	GACNNNNGTC	1 cut(s)	270
PshBI	ATTAAT	1 cut(s)	849
PsiI	TTATAA	1 cut(s)	341
Psp5II	RGGWCCY	1 cut(s)	1271
Psp6I	CCWGG	3 cut(s)	1468, 1744, 1953
PspEI	GGTNACC	3 cut(s)	272, 462, 591
PspFI	CCCAGC	3 cut(s)	29, 1173, 1253
PspGI	CCWGG	3 cut(s)	1468, 1744, 1953
PspN4I	GGNNCC	2 cut(s)	927, 1272
PspPI	GGNCC	2 cut(s)	239, 1271
PspPPI	RGGWCCY	1 cut(s)	1271
PsrI	GAACNNNNNNTAC	2 cut(s)	400, 432
PstI	CTGCAG	3 cut(s)	624, 795, 1010
PsuI	RGATCY	3 cut(s)	217, 925, 987
RsaI	GTAC	3 cut(s)	994, 1578, 1588
RsaNI	GTAC	3 cut(s)	993, 1577, 1587
RseI	CAYNNNNRTG	1 cut(s)	829
SapI	GCTCTTC	2 cut(s)	780, 1494
SaqAI	TTAA	5 cut(s)	191, 849, 1133, 1191, 2002
SatI	GCNGC	6 cut(s)	34, 124, 755, 971, 1009, 1554
Sau3AI	GATC	8 cut(s)	78, 217, 403, 446, 742, 925, 987, 1918
Sau96I	GGNCC	2 cut(s)	239, 1271
SchI	GAGTC	1 cut(s)	954
ScrFI	CCNGG	5 cut(s)	312, 1470, 1746, 1767, 1955
SduI	GDGCHC	1 cut(s)	1205
SfaNI	GCATC	7 cut(s)	355, 463, 536, 1021, 1200, 1311, 1660
SfcI	CTRYAG	3 cut(s)	620, 791, 1006
SinI	GGWCC	2 cut(s)	239, 1271
SmiMI	CAYNNNNRTG	1 cut(s)	829
SmlI	CTYRAG	1 cut(s)	1655
SmoI	CTYRAG	1 cut(s)	1655
SphI	GCATGC	1 cut(s)	510
SsiI	CCGC	4 cut(s)	34, 124, 141, 270
SspMI	CTAG	6 cut(s)	132, 839, 939, 974, 1179, 1557
StyD4I	CCNGG	5 cut(s)	310, 1468, 1744, 1765, 1953
StyI	CCWWGG	1 cut(s)	213
TaaI	ACNGT	7 cut(s)	421, 864, 1051, 1464, 1533, 1591, 1708
TaiI	ACGT	4 cut(s)	68, 131, 581, 998
TaqI	TCGA	7 cut(s)	68, 77, 406, 445, 546, 1623, 1998
TaqII	GACCGA	1 cut(s)	450
TauI	GCSGC	2 cut(s)	36, 126
TfiI	GAWTC	2 cut(s)	494, 1258
Tru1I	TTAA	5 cut(s)	191, 849, 1133, 1191, 2002
Tru9I	TTAA	5 cut(s)	191, 849, 1133, 1191, 2002
TscAI	CASTG	5 cut(s)	254, 331, 426, 922, 1212
TseFI	GTSAC	4 cut(s)	223, 272, 462, 591
TseI	GCWGC	4 cut(s)	754, 970, 1008, 1553
Tsp45I	GTSAC	4 cut(s)	223, 272, 462, 591
TspDTI	ATGAA	7 cut(s)	8, 30, 616, 1355, 1644, 1655, 1698
TspRI	CASTG	5 cut(s)	254, 331, 426, 922, 1212
Van91I	CCANNNNNTGG	1 cut(s)	169
VpaK11BI	GGWCC	2 cut(s)	239, 1271
VspI	ATTAAT	1 cut(s)	849
XagI	CCTNNNNNAGG	1 cut(s)	586
XapI	RAATTY	5 cut(s)	196, 1357, 1476, 1644, 1749
XceI	RCATGY	2 cut(s)	510, 1516
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1961
XmiI	GTMKAC	1 cut(s)	1737
XspI	CTAG	6 cut(s)	132, 839, 939, 974, 1179, 1557
ZraI	GACGTC	1 cut(s)	66
Zsp2I	ATGCAT	3 cut(s)	348, 512, 1675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.