Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Forward (+)

301139 .. 306073

Gene Structure 4935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g00420.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGCCTCCACCGGAGTTTGTCTTTTCCCAGCCCGCCTGCCATCCGTTATCCGTCAGGAACCGACGTCGTCATCATCATCCTCATCCGGAAGATCAAAGTTCAATCCGATCTCGATTCCGTCGCGGAGGCTAGCCGCTGCGTCAACAGACCACACTCCGACGATTCTGACAGCAGCGAACATCGCAAGCGGCAGGTCGTCTGAGAAGGAAGCTCATACGACGACGACGACGTCAGCTGCAGAGACTAAGAGGCAGGCTGGTCAGGAGGAGTACAGGTTCGATGCGGAAGACCAAGGCCTGAGCTTGAAGGATTACTTCGAGCAAGCCAAGGATTTCATCAGCTCCGACGGTGGACCGCCTCGCTGGTTCTCTCCTTTGGGCGGCGGGTCCCGCTTGGACGATTCTCCTCTGCTTCTCTTTTTGCCTGGAATTGATGGCACTGGACTTGGGCTCATAAGGCATCATCAGAAACTTGGAAAAATTTTCGATGTCTGGTGCTTGCATATCCCTGCCAAGGATCGAACAACATTCACAGACCTAGTGAAGCTGGTTGAAAGAACAGTTCGGTCACAGCATCGTCTCGCACCAAATAGGCCTATATATCTTGTTGGAGAATCTCTTGGAGCATGCCTTGCGCTTTCTGTGGCTGCCCTTAACCCTGATATTGACCTTGTTCTAATTTTGGCTAATCCAGCTACATCCTTCAGCAAGTCCCAGCTTCAACCGTTAATACCTTTACTGCAGGTCATTCCTGACTCACTTCCTCTCAGCCCTCCTCACATACTGAGCTCAATGACAGGTTTTCTGATGGGTAACTTGGAGACGGGACTTGGACTTCCTCTGCCACAGACAGTTGAGAAGCTATCACGCGATCTTCTTGCATCAGCATCTTACCTCTCTGTTCTTGCTGATATCATACCTAGAGAAACATTTCTGTGGAAGCTACAAATGATTAGATCAGCATCTCCATACGCCAATTCACGTCTCCACGCTGTAAAAGCTCAAACGCTGATACTTTCCAGTGGACAGGATCAGTTGTTACCTAGTCAAGCGGAAGGAGAAAGACTGAAACACGCCCTTGCAAAATGTGAGATTCGTATGTTTGCTAACAGCGGCCATTTCCTCTTCTTGGAAGATCCTTTTGATTTGGTGACTGTCATCAAGGCAACTGGTGTCTATCGTCGTTCCAGTACTCATGACTTTGTTACTGATTACATACCGCCAACACCTTTAGAAGTCAAAAATATAATTGAATCAAACAGATTGTTAACCATGGTCACTAGCCCAGTGATGTTCTCAACTTTACCAGATGGGAAGATTGTGAGGGGCCTTGCCGGGATACCTTCTGAGGGTCCTGTATTGTTTGTTGGTTATCACATGTTACTGGGGTTTGAATTGGCTCCCATGGTAACTCAGATGATGGAGGAAAGAAACATCCTAATGCGAGGAATAGCACATCCGATGATGTTTATAAAATTGAGAGAAGGAAAGTTTCCTGATCTATCAGCATTCGACACATTCAGACTTATGGGTGCAGTTCCTGTCTCTGGTGCAAACTTTTACAAACTTCTCTCTACAAAGTCTCACGTCCTACTCTATCCAGGTGGAGTGCGTGAGGCTCTTCACCGGAAGGGGGAGGAATATAAGTTATTCTGGCCAGAACAGTCGGAGTTTGTGAGAATGGCATCTAGATTTGGAGCCAAAATTGTACCTTTTGGCGCCGTTGGAGAAGATGATATTGGTGAACTATTTTTGGATTATGACGACCAAATGAGGATTCCTCCACTTAAGGACTATATACAGGAGTTAACAGATGAGGTTGCGAAAGTGAGAAAGGGCGTTGGTGGGGAGGTAGGAAACCAGGATGTACACCTGCCAGGAATCATACCGAAAATTCCTGGCAGGTTCTATTATTATTTTGGAAAACCAATTGAAACAGAAGGGAGGAAGCAGGAATTACGAGACAGGGAGAAAGCTCGTGAACTGTATTTACAAGTGAAGTCAGAAGTTGAGAATTGCCTTGCTTATTTGAGGGAGAAAAGAGAGAAGGATCCGTATAGAACGTTATTGTCTCGGATACAATACAGGGCCATGTCTGGCCTCACATCTGAAATTCCGACATTCGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

711

Amino Acids

78.83

Weight (kDa)

7.69

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1472
AarI	CACCTGC	1 cut(s)	1881
AasI	GACNNNNNNGTC	1 cut(s)	229
AatII	GACGTC	2 cut(s)	68, 233
Acc36I	ACCTGC	4 cut(s)	183, 733, 1881, 1893
AccB1I	GGYRCC	1 cut(s)	1718
AccII	CGCG	2 cut(s)	124, 870
AccIII	TCCGGA	1 cut(s)	86
AclI	AACGTT	1 cut(s)	2063
AclWI	GGATC	5 cut(s)	525, 1038, 1130, 2045, 2058
AcoI	YGGCCR	2 cut(s)	1114, 1655
AcsI	RAATTY	3 cut(s)	480, 1893, 2112
AcuI	CTGAAG	1 cut(s)	688
AcyI	GRCGYC	3 cut(s)	65, 230, 1719
AfaI	GTAC	4 cut(s)	272, 1192, 1710, 1869
AfiI	CCNNNNNNNGG	6 cut(s)	380, 514, 1129, 1349, 1547, 1633
AflII	CTTAAG	1 cut(s)	1787
AflIII	ACRYGT	1 cut(s)	1377
AgsI	TTSAA	7 cut(s)	103, 307, 554, 722, 1253, 1394, 1934
AjiI	CACGTC	2 cut(s)	983, 1588
AjnI	CCWGG	5 cut(s)	424, 1600, 1860, 1876, 1897
AjuI	GAANNNNNNNTTGG	4 cut(s)	1722, 1754, 1761, 1793
AloI	GAACNNNNNNTCC	2 cut(s)	260, 292
Alw21I	GWGCWC	1 cut(s)	791
Alw26I	GTCTC	8 cut(s)	236, 584, 815, 989, 1549, 1587, 1956, 2076
AlwI	GGATC	5 cut(s)	525, 1038, 1130, 2045, 2058
AlwNI	CAGNNNCTG	1 cut(s)	1541
Aor13HI	TCCGGA	1 cut(s)	86
AoxI	GGCC	8 cut(s)	3, 295, 593, 1114, 1327, 1655, 2088, 2098
ApeKI	GCWGC	4 cut(s)	137, 173, 236, 647
ApoI	RAATTY	3 cut(s)	480, 1893, 2112
Asp700I	GAANNNNTTC	1 cut(s)	930
AspLEI	GCGC	2 cut(s)	637, 1721
AspS9I	GGNCC	5 cut(s)	353, 387, 1327, 1352, 2088
AsuC2I	CCSGG	1 cut(s)	1336
AsuHPI	GGTGA	3 cut(s)	1162, 1616, 1754
AsuNHI	GCTAGC	1 cut(s)	130
AvaII	GGWCC	3 cut(s)	353, 387, 1352
BalI	TGGCCA	1 cut(s)	1657
BamHI	GGATCC	1 cut(s)	2050
BanI	GGYRCC	1 cut(s)	1718
BanII	GRGCYC	2 cut(s)	453, 791
BauI	CACGAG	1 cut(s)	1977
BbsI	GAAGAC	1 cut(s)	294
Bbv12I	GWGCWC	1 cut(s)	791
BbvI	GCAGC	4 cut(s)	124, 185, 223, 634
BccI	CCATC	5 cut(s)	49, 428, 802, 1304, 1414
BceAI	ACGGC	1 cut(s)	1706
BcgI	CGANNNNNNTGC	2 cut(s)	860, 894
BciT130I	CCWGG	5 cut(s)	426, 1602, 1862, 1878, 1899
BciVI	GTATCC	2 cut(s)	1332, 2070
BcnI	CCSGG	1 cut(s)	1336
BcoDI	GTCTC	8 cut(s)	236, 584, 815, 989, 1549, 1587, 1956, 2076
BfaI	CTAG	6 cut(s)	131, 539, 921, 1044, 1281, 1689
BfmI	CTRYAG	2 cut(s)	237, 740
BfoI	RGCGCY	1 cut(s)	1722
BfrI	CTTAAG	1 cut(s)	1787
BfuAI	ACCTGC	4 cut(s)	183, 733, 1881, 1893
BfuI	GTATCC	2 cut(s)	1332, 2070
BisI	GCNGC	8 cut(s)	135, 138, 174, 190, 237, 382, 648, 1114
BlsI	GCNGC	8 cut(s)	136, 139, 175, 191, 238, 383, 649, 1115
BmcAI	AGTACT	1 cut(s)	1192
Bme1390I	CCNGG	6 cut(s)	426, 1336, 1602, 1862, 1878, 1899
Bme18I	GGWCC	3 cut(s)	353, 387, 1352
BmgBI	CACGTC	2 cut(s)	983, 1588
BmgT120I	GGNCC	5 cut(s)	353, 387, 1327, 1352, 2088
BmiI	GGNNCC	9 cut(s)	60, 388, 389, 1328, 1353, 1401, 1699, 1720, 2052
BmrFI	CCNGG	6 cut(s)	426, 1336, 1602, 1862, 1878, 1899
BmrI	ACTGGG	2 cut(s)	1280, 1394
BmsI	GCATC	7 cut(s)	271, 469, 583, 890, 896, 971, 1694
BmtI	GCTAGC	1 cut(s)	134
BmuI	ACTGGG	2 cut(s)	1280, 1394
BpiI	GAAGAC	1 cut(s)	294
BplI	GAGNNNNNCTC	2 cut(s)	1765, 1797
Bpu10I	CCTNAGC	1 cut(s)	299
BpuMI	CCSGG	1 cut(s)	1336
BsaBI	GATNNNNATC	1 cut(s)	961
BsaHI	GRCGYC	3 cut(s)	65, 230, 1719
BsaJI	CCNNGG	5 cut(s)	292, 327, 513, 1272, 1404
BsaWI	WCCGGW	3 cut(s)	11, 86, 1626
BsaXI	ACNNNNNCTCC	2 cut(s)	260, 290
Bsc4I	CCNNNNNNNGG	6 cut(s)	380, 514, 1129, 1349, 1547, 1633
Bse1I	ACTGG	6 cut(s)	445, 1020, 1174, 1188, 1286, 1389
Bse8I	GATNNNNATC	1 cut(s)	961
BseAI	TCCGGA	1 cut(s)	86
BseBI	CCWGG	5 cut(s)	426, 1602, 1862, 1878, 1899
BseDI	CCNNGG	5 cut(s)	292, 327, 513, 1272, 1404
BseGI	GGATG	7 cut(s)	41, 77, 83, 698, 1434, 1456, 1870
BseJI	GATNNNNATC	1 cut(s)	961
BseLI	CCNNNNNNNGG	6 cut(s)	380, 514, 1129, 1349, 1547, 1633
BseMII	CTCAG	6 cut(s)	192, 290, 776, 781, 1338, 1427
BseNI	ACTGG	6 cut(s)	445, 1020, 1174, 1188, 1286, 1389
BseRI	GAGGAG	3 cut(s)	281, 396, 765
BseXI	GCAGC	4 cut(s)	124, 185, 223, 634
BseYI	CCCAGC	2 cut(s)	28, 714
BsgI	GTGCAG	1 cut(s)	1554
Bsh1236I	CGCG	2 cut(s)	124, 870
BshFI	GGCC	8 cut(s)	5, 297, 595, 1116, 1329, 1657, 2090, 2100
BshNI	GGYRCC	1 cut(s)	1718
BsiHKAI	GWGCWC	1 cut(s)	791
BsiSI	CCGG	4 cut(s)	12, 87, 1335, 1627
BslFI	GGGAC	3 cut(s)	373, 697, 840
BslI	CCNNNNNNNGG	6 cut(s)	380, 514, 1129, 1349, 1547, 1633
BsmAI	GTCTC	8 cut(s)	236, 584, 815, 989, 1549, 1587, 1956, 2076
BsmBI	CGTCTC	3 cut(s)	584, 815, 989
BsmFI	GGGAC	3 cut(s)	373, 697, 840
BsmI	GAATGC	1 cut(s)	1508
BsnI	GGCC	8 cut(s)	5, 297, 595, 1116, 1329, 1657, 2090, 2100
Bsp1286I	GDGCHC	2 cut(s)	453, 791
Bsp13I	TCCGGA	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	1867
Bsp143I	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
Bsp19I	CCATGG	2 cut(s)	1272, 1404
BspANI	GGCC	8 cut(s)	5, 297, 595, 1116, 1329, 1657, 2090, 2100
BspCNI	CTCAG	6 cut(s)	193, 291, 777, 780, 1339, 1426
BspEI	TCCGGA	1 cut(s)	86
BspFNI	CGCG	2 cut(s)	124, 870
BspHI	TCATGA	1 cut(s)	1195
BspLI	GGNNCC	9 cut(s)	60, 388, 389, 1328, 1353, 1401, 1699, 1720, 2052
BspMAI	CTGCAG	2 cut(s)	241, 744
BspMI	ACCTGC	4 cut(s)	183, 733, 1881, 1893
BspOI	GCTAGC	1 cut(s)	134
BspPI	GGATC	5 cut(s)	525, 1038, 1130, 2045, 2058
BspQI	GCTCTTC	1 cut(s)	1626
BspT107I	GGYRCC	1 cut(s)	1718
BspTI	CTTAAG	1 cut(s)	1787
BsrGI	TGTACA	1 cut(s)	1867
BsrI	ACTGG	6 cut(s)	445, 1020, 1174, 1188, 1286, 1389
BssECI	CCNNGG	5 cut(s)	292, 327, 513, 1272, 1404
BssMI	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
BssNI	GRCGYC	3 cut(s)	65, 230, 1719
BssSI	CACGAG	1 cut(s)	1977
BssT1I	CCWWGG	5 cut(s)	292, 327, 513, 1272, 1404
Bst2BI	CACGAG	1 cut(s)	1977
Bst2UI	CCWGG	5 cut(s)	426, 1602, 1862, 1878, 1899
Bst4CI	ACNGT	7 cut(s)	350, 562, 726, 853, 1156, 1665, 1986
Bst6I	CTCTTC	2 cut(s)	1130, 1626
BstACI	GRCGYC	3 cut(s)	65, 230, 1719
BstAFI	CTTAAG	1 cut(s)	1787
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstAUI	TGTACA	1 cut(s)	1867
BstC8I	GCNNGC	8 cut(s)	34, 38, 132, 187, 255, 324, 500, 628
BstDEI	CTNAG	7 cut(s)	201, 246, 299, 767, 785, 1347, 1413
BstDSI	CCRYGG	2 cut(s)	1272, 1404
BstF5I	GGATG	7 cut(s)	41, 77, 83, 698, 1434, 1456, 1870
BstFNI	CGCG	2 cut(s)	124, 870
BstH2I	RGCGCY	1 cut(s)	1722
BstHHI	GCGC	2 cut(s)	637, 1721
BstKTI	GATC	9 cut(s)	95, 111, 520, 874, 959, 1033, 1138, 1501, 2053
BstMAI	GTCTC	8 cut(s)	236, 584, 815, 989, 1549, 1587, 1956, 2076
BstMBI	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
BstMWI	GCNNNNNNNGC	6 cut(s)	182, 390, 457, 632, 692, 998
BstNI	CCWGG	5 cut(s)	426, 1602, 1862, 1878, 1899
BstNSI	RCATGY	2 cut(s)	630, 1381
BstSCI	CCNGG	6 cut(s)	424, 1334, 1600, 1860, 1876, 1897
BstSFI	CTRYAG	2 cut(s)	237, 740
BstUI	CGCG	2 cut(s)	124, 870
BstV1I	GCAGC	4 cut(s)	124, 185, 223, 634
BstV2I	GAAGAC	1 cut(s)	294
BstX2I	RGATCY	2 cut(s)	1135, 2050
BstYI	RGATCY	2 cut(s)	1135, 2050
BsuI	GTATCC	2 cut(s)	1332, 2070
BsuRI	GGCC	8 cut(s)	5, 297, 595, 1116, 1329, 1657, 2090, 2100
BtgI	CCRYGG	2 cut(s)	1272, 1404
BtgZI	GCGATG	1 cut(s)	166
BtrI	CACGTC	2 cut(s)	983, 1588
BtsCI	GGATG	7 cut(s)	41, 77, 83, 698, 1434, 1456, 1870
BtsIMutI	CAGTG	3 cut(s)	438, 1027, 1293
BveI	ACCTGC	4 cut(s)	183, 733, 1881, 1893
Cac8I	GCNNGC	8 cut(s)	34, 38, 132, 187, 255, 324, 500, 628
CaiI	CAGNNNCTG	1 cut(s)	1541
CciI	TCATGA	1 cut(s)	1195
CfoI	GCGC	2 cut(s)	637, 1721
Cfr13I	GGNCC	5 cut(s)	353, 387, 1327, 1352, 2088
CseI	GACGC	1 cut(s)	129
Csp6I	GTAC	4 cut(s)	271, 1191, 1709, 1868
CviAII	CATG	6 cut(s)	627, 1196, 1273, 1378, 1405, 2092
CviQI	GTAC	4 cut(s)	271, 1191, 1709, 1868
DdeI	CTNAG	7 cut(s)	201, 246, 299, 767, 785, 1347, 1413
DinI	GGCGCC	1 cut(s)	1720
DpnI	GATC	9 cut(s)	94, 110, 519, 873, 958, 1032, 1137, 1500, 2052
DpnII	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
DrdI	GACNNNNNNGTC	1 cut(s)	229
DseDI	GACNNNNNNGTC	1 cut(s)	229
EaeI	YGGCCR	2 cut(s)	1114, 1655
Eam1104I	CTCTTC	2 cut(s)	1130, 1626
EarI	CTCTTC	2 cut(s)	1130, 1626
Ecl136II	GAGCTC	1 cut(s)	789
Eco130I	CCWWGG	5 cut(s)	292, 327, 513, 1272, 1404
Eco147I	AGGCCT	2 cut(s)	297, 595
Eco24I	GRGCYC	2 cut(s)	453, 791
Eco32I	GATATC	2 cut(s)	913, 2128
Eco47I	GGWCC	3 cut(s)	353, 387, 1352
Eco53kI	GAGCTC	1 cut(s)	789
Eco57I	CTGAAG	1 cut(s)	688
EcoICRI	GAGCTC	1 cut(s)	789
EcoO109I	RGGNCCY	3 cut(s)	387, 1327, 1352
EcoRII	CCWGG	5 cut(s)	424, 1600, 1860, 1876, 1897
EcoRV	GATATC	2 cut(s)	913, 2128
EcoT14I	CCWWGG	5 cut(s)	292, 327, 513, 1272, 1404
EcoT38I	GRGCYC	2 cut(s)	453, 791
EgeI	GGCGCC	1 cut(s)	1720
EheI	GGCGCC	1 cut(s)	1720
ErhI	CCWWGG	5 cut(s)	292, 327, 513, 1272, 1404
Esp3I	CGTCTC	3 cut(s)	584, 815, 989
FaeI	CATG	6 cut(s)	630, 1199, 1276, 1381, 1408, 2095
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	3 cut(s)	373, 697, 840
FatI	CATG	6 cut(s)	626, 1195, 1272, 1377, 1404, 2091
FauI	CCCGC	3 cut(s)	41, 377, 398
Fnu4HI	GCNGC	8 cut(s)	135, 138, 174, 190, 237, 382, 648, 1114
FokI	GGATG	7 cut(s)	28, 64, 70, 685, 1421, 1443, 1877
FriOI	GRGCYC	2 cut(s)	453, 791
Fsp4HI	GCNGC	8 cut(s)	135, 138, 174, 190, 237, 382, 648, 1114
FspBI	CTAG	6 cut(s)	131, 539, 921, 1044, 1281, 1689
GlaI	GCGC	2 cut(s)	636, 1720
GluI	GCNGC	8 cut(s)	135, 138, 174, 190, 237, 382, 648, 1114
GsaI	CCCAGC	2 cut(s)	32, 718
HaeII	RGCGCY	1 cut(s)	1722
HaeIII	GGCC	8 cut(s)	5, 297, 595, 1116, 1329, 1657, 2090, 2100
HapII	CCGG	4 cut(s)	12, 87, 1335, 1627
HgaI	GACGC	1 cut(s)	129
HhaI	GCGC	2 cut(s)	637, 1721
Hin1I	GRCGYC	3 cut(s)	65, 230, 1719
Hin1II	CATG	6 cut(s)	630, 1199, 1276, 1381, 1408, 2095
Hin6I	GCGC	2 cut(s)	635, 1719
HinP1I	GCGC	2 cut(s)	635, 1719
HincII	GTYRAC	3 cut(s)	144, 1269, 1809
HindII	GTYRAC	3 cut(s)	144, 1269, 1809
HinfI	GANTC	9 cut(s)	115, 163, 401, 614, 755, 1093, 1253, 1777, 1881
HpaI	GTTAAC	2 cut(s)	1269, 1809
HpaII	CCGG	4 cut(s)	12, 87, 1335, 1627
HphI	GGTGA	3 cut(s)	1162, 1616, 1754
Hpy166II	GTNNAC	8 cut(s)	144, 353, 1025, 1269, 1745, 1809, 1870, 1982
Hpy188III	TCNNGA	9 cut(s)	56, 87, 112, 263, 752, 1196, 1496, 1689, 1979
Hpy8I	GTNNAC	8 cut(s)	144, 353, 1025, 1269, 1745, 1809, 1870, 1982
HpyAV	CCTTC	9 cut(s)	199, 301, 712, 1049, 1353, 1478, 1624, 1934, 2041
HpyCH4III	ACNGT	7 cut(s)	350, 562, 726, 853, 1156, 1665, 1986
HpyCH4IV	ACGT	5 cut(s)	65, 230, 982, 1587, 2063
HpyCH4V	TGCA	7 cut(s)	239, 502, 742, 881, 1082, 1535, 1553
HpyF10VI	GCNNNNNNNGC	6 cut(s)	182, 390, 457, 632, 692, 998
HpyF3I	CTNAG	7 cut(s)	201, 246, 299, 767, 785, 1347, 1413
HpySE526I	ACGT	5 cut(s)	65, 230, 982, 1587, 2063
Hsp92I	GRCGYC	3 cut(s)	65, 230, 1719
Hsp92II	CATG	6 cut(s)	630, 1199, 1276, 1381, 1408, 2095
HspAI	GCGC	2 cut(s)	635, 1719
KasI	GGCGCC	1 cut(s)	1718
KflI	GGGWCCC	1 cut(s)	387
Kpn2I	TCCGGA	1 cut(s)	86
KspAI	GTTAAC	2 cut(s)	1269, 1809
Kzo9I	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
LguI	GCTCTTC	1 cut(s)	1626
LmnI	GCTCC	4 cut(s)	347, 623, 1405, 1697
Lsp1109I	GCAGC	4 cut(s)	124, 185, 223, 634
LweI	GCATC	7 cut(s)	271, 469, 583, 890, 896, 971, 1694
MaeI	CTAG	6 cut(s)	131, 539, 921, 1044, 1281, 1689
MaeII	ACGT	5 cut(s)	65, 230, 982, 1587, 2063
MaeIII	GTNAC	8 cut(s)	567, 812, 1038, 1150, 1204, 1276, 1380, 1408
MalI	GATC	9 cut(s)	94, 110, 519, 873, 958, 1032, 1137, 1500, 2052
MboI	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
MboII	GAAGA	8 cut(s)	102, 299, 866, 1117, 1145, 1327, 1613, 1742
MfeI	CAATTG	1 cut(s)	1929
MflI	RGATCY	2 cut(s)	1135, 2050
MhlI	GDGCHC	2 cut(s)	453, 791
MlsI	TGGCCA	1 cut(s)	1657
MluNI	TGGCCA	1 cut(s)	1657
Mly113I	GGCGCC	1 cut(s)	1719
MlyI	GAGTC	1 cut(s)	749
MmeI	TCCRAC	5 cut(s)	182, 369, 589, 1647, 1705
Mox20I	TGGCCA	1 cut(s)	1657
MroI	TCCGGA	1 cut(s)	86
MroXI	GAANNNNTTC	1 cut(s)	930
MscI	TGGCCA	1 cut(s)	1657
MseI	TTAA	5 cut(s)	654, 728, 1268, 1788, 1808
MslI	CAYNNNNRTG	2 cut(s)	934, 1439
Msp20I	TGGCCA	1 cut(s)	1657
MspA1I	CMGCKG	3 cut(s)	137, 236, 1113
MspCI	CTTAAG	1 cut(s)	1787
MspI	CCGG	4 cut(s)	12, 87, 1335, 1627
MspR9I	CCNGG	6 cut(s)	426, 1336, 1602, 1862, 1878, 1899
MunI	CAATTG	1 cut(s)	1929
Mva1269I	GAATGC	1 cut(s)	1508
MvaI	CCWGG	5 cut(s)	426, 1602, 1862, 1878, 1899
MvnI	CGCG	2 cut(s)	124, 870
MwoI	GCNNNNNNNGC	6 cut(s)	182, 390, 457, 632, 692, 998
NarI	GGCGCC	1 cut(s)	1719
NciI	CCSGG	1 cut(s)	1336
NcoI	CCATGG	2 cut(s)	1272, 1404
NdeII	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
NheI	GCTAGC	1 cut(s)	130
NlaIII	CATG	6 cut(s)	630, 1199, 1276, 1381, 1408, 2095
NlaIV	GGNNCC	9 cut(s)	60, 388, 389, 1328, 1353, 1401, 1699, 1720, 2052
NmuCI	GTSAC	3 cut(s)	567, 1150, 1276
NspI	RCATGY	2 cut(s)	630, 1381
PaeI	GCATGC	1 cut(s)	630
PagI	TCATGA	1 cut(s)	1195
PaqCI	CACCTGC	1 cut(s)	1881
PceI	AGGCCT	2 cut(s)	297, 595
PciI	ACATGT	1 cut(s)	1377
PciSI	GCTCTTC	1 cut(s)	1626
PcsI	WCGNNNNNNNCGW	2 cut(s)	224, 227
PctI	GAATGC	1 cut(s)	1508
PdmI	GAANNNNTTC	1 cut(s)	930
PfeI	GAWTC	8 cut(s)	115, 163, 401, 614, 1093, 1253, 1777, 1881
PflFI	GACNNNGTC	2 cut(s)	67, 229
PkrI	GCNGC	8 cut(s)	136, 139, 175, 191, 238, 383, 649, 1115
PleI	GAGTC	1 cut(s)	749
PluTI	GGCGCC	1 cut(s)	1722
PpsI	GAGTC	1 cut(s)	749
PpuMI	RGGWCCY	2 cut(s)	387, 1352
PscI	ACATGT	1 cut(s)	1377
PsiI	TTATAA	1 cut(s)	1472
Psp124BI	GAGCTC	1 cut(s)	791
Psp1406I	AACGTT	1 cut(s)	2063
Psp5II	RGGWCCY	2 cut(s)	387, 1352
Psp6I	CCWGG	5 cut(s)	424, 1600, 1860, 1876, 1897
PspFI	CCCAGC	2 cut(s)	28, 714
PspGI	CCWGG	5 cut(s)	424, 1600, 1860, 1876, 1897
PspN4I	GGNNCC	9 cut(s)	60, 388, 389, 1328, 1353, 1401, 1699, 1720, 2052
PspPI	GGNCC	5 cut(s)	353, 387, 1327, 1352, 2088
PspPPI	RGGWCCY	2 cut(s)	387, 1352
PsrI	GAACNNNNNNTAC	2 cut(s)	1974, 2006
PstI	CTGCAG	2 cut(s)	241, 744
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	2 cut(s)	1135, 2050
PsyI	GACNNNGTC	2 cut(s)	67, 229
PvuII	CAGCTG	1 cut(s)	236
RsaI	GTAC	4 cut(s)	272, 1192, 1710, 1869
RsaNI	GTAC	4 cut(s)	271, 1191, 1709, 1868
RseI	CAYNNNNRTG	2 cut(s)	934, 1439
SacI	GAGCTC	1 cut(s)	791
SapI	GCTCTTC	1 cut(s)	1626
SaqAI	TTAA	5 cut(s)	654, 728, 1268, 1788, 1808
SatI	GCNGC	8 cut(s)	135, 138, 174, 190, 237, 382, 648, 1114
Sau3AI	GATC	9 cut(s)	92, 108, 517, 871, 956, 1030, 1135, 1498, 2050
Sau96I	GGNCC	5 cut(s)	353, 387, 1327, 1352, 2088
ScaI	AGTACT	1 cut(s)	1192
SchI	GAGTC	1 cut(s)	749
ScrFI	CCNGG	6 cut(s)	426, 1336, 1602, 1862, 1878, 1899
SduI	GDGCHC	2 cut(s)	453, 791
SfaNI	GCATC	7 cut(s)	271, 469, 583, 890, 896, 971, 1694
SfcI	CTRYAG	2 cut(s)	237, 740
SfoI	GGCGCC	1 cut(s)	1720
SinI	GGWCC	3 cut(s)	353, 387, 1352
SmiMI	CAYNNNNRTG	2 cut(s)	934, 1439
SmlI	CTYRAG	1 cut(s)	1787
SmoI	CTYRAG	1 cut(s)	1787
SphI	GCATGC	1 cut(s)	630
SseBI	AGGCCT	2 cut(s)	297, 595
SspDI	GGCGCC	1 cut(s)	1718
SspMI	CTAG	6 cut(s)	131, 539, 921, 1044, 1281, 1689
SstI	GAGCTC	1 cut(s)	791
StuI	AGGCCT	2 cut(s)	297, 595
StyD4I	CCNGG	6 cut(s)	424, 1334, 1600, 1860, 1876, 1897
StyI	CCWWGG	5 cut(s)	292, 327, 513, 1272, 1404
TaaI	ACNGT	7 cut(s)	350, 562, 726, 853, 1156, 1665, 1986
TaiI	ACGT	5 cut(s)	68, 233, 985, 1590, 2066
TaqI	TCGA	7 cut(s)	113, 279, 318, 486, 520, 1512, 2124
TaqII	GACCGA	1 cut(s)	555
TatI	WGTACW	3 cut(s)	270, 1190, 1867
TauI	GCSGC	4 cut(s)	137, 192, 384, 1116
TfiI	GAWTC	8 cut(s)	115, 163, 401, 614, 1093, 1253, 1777, 1881
Tru1I	TTAA	5 cut(s)	654, 728, 1268, 1788, 1808
Tru9I	TTAA	5 cut(s)	654, 728, 1268, 1788, 1808
TscAI	CASTG	3 cut(s)	445, 1027, 1293
TseFI	GTSAC	3 cut(s)	567, 1150, 1276
TseI	GCWGC	4 cut(s)	137, 173, 236, 647
Tsp45I	GTSAC	3 cut(s)	567, 1150, 1276
TspDTI	ATGAA	1 cut(s)	325
TspGWI	ACGGA	4 cut(s)	34, 41, 108, 2043
TspRI	CASTG	3 cut(s)	445, 1027, 1293
Tth111I	GACNNNGTC	2 cut(s)	67, 229
Vha464I	CTTAAG	1 cut(s)	1787
VpaK11BI	GGWCC	3 cut(s)	353, 387, 1352
XapI	RAATTY	3 cut(s)	480, 1893, 2112
XbaI	TCTAGA	1 cut(s)	1688
XceI	RCATGY	2 cut(s)	630, 1381
XmnI	GAANNNNTTC	1 cut(s)	930
XspI	CTAG	6 cut(s)	131, 539, 921, 1044, 1281, 1689
ZraI	GACGTC	2 cut(s)	66, 231
ZrmI	AGTACT	1 cut(s)	1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.