Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000740

Physical Location & Seq

Genomic Coordinates Reverse (-)

71411693 .. 71413959

Gene Structure 2267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0592300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGAGAGAGTGCATCTCCATCCACATCGGTCAGGCCGGAATCCAAGTCGGCAACGCCTGCTGGGAGCTTTACTGCCTCGAACACGGCATTCAGCCTGATGGGCAAATGCCGAGTGACAAGACCGTCGGCGGCGGAGACGACGCCTTCAACACCTTCTTCAGTGAAACCGGAGCCGGAAAGCACGTCCCCCGCGCCGTGTTCTTGGATCTGGAGCCCACCGTCATCGACGAGGTGAGGACCGGAACTTACCGTCAGCTGTTCCACCCCGAGCAGCTCATCAGCGGCAAAGAGGACGCCGCCAACAACTTCGCCAGAGGCCATTACACGATTGGAAAGGAGATTGTGGATCTGTGCTTGGATCGGATCCGGAAGCTTGCGGACAACTGTACTGGGCTTCAAGGGTTTCTGGTGTTCCATGCCGTCGGAGGTGGGACTGGATCTGGGCTTGGATCTCTGCTCCTGGAGAGGCTCTCTGTGGACTATGGGAAGAAATCTAAGCTTGGATTCACTGTTTACCCATCTCCTCAGGTTTCGACCTCTGTGGTTGAGCCTTACAACAGTGTTTTGTCCACTCACTCGCTCTTGGAGCACACTGATGTGGCTGTGCTTCTGGACAATGAAGCCATCTATGATATCTGCCGCAGATCGCTTGACATTGAGAGACCAACTTACACCAACCTCAACAGGCTTGTTTCTCAGGTTATTTCCTCACTCACTGCTTCTCTGCGTTTTGATGGAGCACTCAATGTTGATGTGACTGAGTTCCAGACCAATCTGGTGCCATACCCTAGAATTCATTTCATGCTTTCATCCTATGCACCAGTGATCTCTGCCGAGAAGGCCTACCATGAGCAACTCTCTGTGGCTGAAATCACCAACAGCGCCTTTGAGCCGGCCTCTATGATGGCCAAATGTGATCCTAGGCATGGGAAGTATATGGCTTGCTGCCTGATGTACAGAGGAGATGTGGTACCAAAGGATGTGAATGCTGCTGTGGCCACAATCAAGACCAAGAGGACCATTCAGTTTGTGGATTGGTGCCCAACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCCTACTGTTGTACCTGGTGGTGACTTGGCCAAGGTTCAGAGGGCTGTGTGCATGATTTCTAACTCCACTAGTGTTGCTGAAGTGTTTTCAAGGATTGATCACAAGTTTGATCTGATGTATGCTAAGCGTGCTTTTGTGCACTGGTATGTTGGTGAGGGTATGGAAGAGGGTGAGTTTTCGGAAGCTAGGGAGGACTTGGCTGCCCTTGAGAAGGATTATGAAGAAGTTGGGTTGGAGTCAGCTGAGGGTGAAGATGGTGAGGATGATGAGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010287 GO:0016101 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019432 GO:0033306 GO:0034308 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576 GO:1901615 GO:1903173

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DAGAT Hydrolase_4

Protein Analysis

450

Amino Acids

49.63

Weight (kDa)

4.96

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tubulin	PF00091	3 - 213	6.2e-63	Tubulin/FtsZ family, GTPase domain
Tubulin_C	PF03953	263 - 392	8e-52	Tubulin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02030 AT3G02030 AT3G26820 AT3G26820 AT3G26840 AT5G41120 AT5G41120 AT5G41120 AT5G41130 AT5G41130 AT5G41130
fragaria_vesca	FvH4_3g35400 FvH4_3g39220 FvH4_3g39220 FvH4_3g39270 FvH4_3g39280 FvH4_3g39280 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060 FvH4_6g54060
malus_domestica	MD09G1005800.v1.1 MD17G1009900.v1.1
prunus_persica	Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1 Prupe.3G311200_v2.0.a1
pyrus_communis	pycom111g00420
rosa_chinensis	RchiOBHm_Chr2g0176241 RchiOBHm_Chr5g0070671 RchiOBHm_Chr5g0070681 RchiOBHm_Chr5g0070691
rosa_laevigata	RLG00000022394 RLG00000036149 RLG00000036150 RLG00000036152
rosa_multiflora	Rmu_co8466433.1_g000001 Rmu_sc0000249.1_g000001 Rmu_sc0000405.1_g000016 Rmu_sc0005197.1_g000009 Rmu_sc0005197.1_g000015 Rmu_sc0036323.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010480 Rroxscaffold_1G00010530 Rroxscaffold_1G00010550 Rroxscaffold_1G00010560 Rroxscaffold_2G00076650 Rroxscaffold_5G00357250
rosa_rugosa	Rorug02G0592200 Rorug02G0592300 Rorug05G0407500 Rorug05G0407800
rosa_samantha	Rh2AG670700 Rh2BG682200 Rh2CG645000 Rh2DG695800 Rh5AG463200 Rh5AG463300 Rh5AG463400 Rh5BG481200 Rh5CG505400 Rh5CG505500 Rh5DG493300 Rh5DG493600 Rh5DG493700
rosa_wichuraiana	Rw2G055020 Rw5G043110 Rw5G043120 Rw5G043130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	122
Acc65I	GGTACC	1 cut(s)	970
AccB1I	GGYRCC	3 cut(s)	778, 970, 1038
AccII	CGCG	1 cut(s)	192
AccIII	TCCGGA	1 cut(s)	366
AciI	CCGC	7 cut(s)	129, 132, 190, 282, 297, 377, 640
AclWI	GGATC	8 cut(s)	213, 354, 358, 366, 371, 445, 457, 911
AcoI	YGGCCR	3 cut(s)	906, 996, 1104
AcsI	RAATTY	1 cut(s)	792
AcuI	CTGAAG	2 cut(s)	142, 1176
AcyI	GRCGYC	2 cut(s)	141, 294
AfaI	GTAC	5 cut(s)	388, 956, 972, 1089, 1349
AfiI	CCNNNNNNNGG	2 cut(s)	926, 1288
AgsI	TTSAA	4 cut(s)	148, 398, 1054, 1167
AhlI	ACTAGT	1 cut(s)	1145
AjiI	CACGTC	1 cut(s)	184
AjnI	CCWGG	2 cut(s)	459, 1090
AleI	CACNNNNGTG	1 cut(s)	596
AluBI	AGCT	7 cut(s)	67, 256, 274, 373, 499, 1262, 1319
AluI	AGCT	7 cut(s)	67, 256, 274, 373, 499, 1262, 1319
Alw21I	GWGCWC	3 cut(s)	591, 742, 1218
Alw26I	GTCTC	2 cut(s)	129, 655
Alw44I	GTGCAC	1 cut(s)	1214
AlwI	GGATC	8 cut(s)	213, 354, 358, 366, 371, 445, 457, 911
Ama87I	CYCGRG	1 cut(s)	266
Aor13HI	TCCGGA	1 cut(s)	366
AoxI	GGCC	7 cut(s)	33, 316, 840, 894, 906, 996, 1104
ApaLI	GTGCAC	1 cut(s)	1214
ApeKI	GCWGC	4 cut(s)	271, 945, 989, 1277
ApoI	RAATTY	1 cut(s)	792
Asp718I	GGTACC	1 cut(s)	970
AspA2I	CCTAGG	1 cut(s)	920
AspLEI	GCGC	2 cut(s)	194, 884
AspS9I	GGNCC	2 cut(s)	237, 1017
AsuHPI	GGTGA	7 cut(s)	244, 865, 1109, 1241, 1259, 1337, 1346
AvaI	CYCGRG	1 cut(s)	266
AvaII	GGWCC	2 cut(s)	237, 1017
AvrII	CCTAGG	1 cut(s)	920
AxyI	CCTNAGG	1 cut(s)	525
BaeGI	GKGCMC	2 cut(s)	1043, 1218
BaeI	ACNNNNGTAYC	2 cut(s)	1071, 1104
BalI	TGGCCA	3 cut(s)	908, 998, 1106
BamHI	GGATCC	1 cut(s)	363
BanI	GGYRCC	3 cut(s)	778, 970, 1038
BanII	GRGCYC	1 cut(s)	216
Bbv12I	GWGCWC	3 cut(s)	591, 742, 1218
BbvCI	CCTCAGC	1 cut(s)	1320
BbvI	GCAGC	4 cut(s)	283, 932, 976, 1264
BccI	CCATC	7 cut(s)	26, 92, 526, 632, 728, 898, 1325
BceAI	ACGGC	3 cut(s)	100, 179, 404
BciT130I	CCWGG	2 cut(s)	461, 1092
BclI	TGATCA	1 cut(s)	1174
BcoDI	GTCTC	2 cut(s)	129, 655
BcuI	ACTAGT	1 cut(s)	1145
BfaI	CTAG	5 cut(s)	789, 921, 1146, 1263, 1351
BfoI	RGCGCY	1 cut(s)	885
BglI	GCCNNNNNGGC	2 cut(s)	100, 839
BisI	GCNGC	8 cut(s)	130, 272, 283, 297, 640, 946, 990, 1278
BlnI	CCTAGG	1 cut(s)	920
BlpI	GCTNAGC	1 cut(s)	1200
BlsI	GCNGC	8 cut(s)	131, 273, 284, 298, 641, 947, 991, 1279
BmcAI	AGTACT	1 cut(s)	1349
Bme1390I	CCNGG	2 cut(s)	461, 1092
Bme18I	GGWCC	2 cut(s)	237, 1017
BmeT110I	CYCGRG	1 cut(s)	266
BmgBI	CACGTC	1 cut(s)	184
BmgT120I	GGNCC	2 cut(s)	237, 1017
BmiI	GGNNCC	6 cut(s)	172, 213, 365, 780, 972, 1040
BmrFI	CCNGG	2 cut(s)	461, 1092
BmrI	ACTGGG	2 cut(s)	399, 1056
BmsI	GCATC	1 cut(s)	21
BmuI	ACTGGG	2 cut(s)	399, 1056
BplI	GAGNNNNNCTC	7 cut(s)	31, 455, 487, 842, 874, 881, 913
BpmI	CTGGAG	2 cut(s)	230, 482
Bpu10I	CCTNAGC	1 cut(s)	1320
Bpu1102I	GCTNAGC	1 cut(s)	1200
BpuEI	CTTGAG	1 cut(s)	1304
BsaHI	GRCGYC	2 cut(s)	141, 294
BsaI	GGTCTC	1 cut(s)	655
BsaJI	CCNNGG	2 cut(s)	920, 1107
BsaWI	WCCGGW	3 cut(s)	167, 239, 366
BsaXI	ACNNNNNCTCC	2 cut(s)	954, 984
Bsc4I	CCNNNNNNNGG	2 cut(s)	926, 1288
Bse118I	RCCGGY	1 cut(s)	892
Bse1I	ACTGG	5 cut(s)	394, 439, 821, 1051, 1223
Bse21I	CCTNAGG	1 cut(s)	525
BseAI	TCCGGA	1 cut(s)	366
BseBI	CCWGG	2 cut(s)	461, 1092
BseDI	CCNNGG	2 cut(s)	920, 1107
BseGI	GGATG	4 cut(s)	18, 809, 985, 1345
BseLI	CCNNNNNNNGG	2 cut(s)	926, 1288
BseMII	CTCAG	4 cut(s)	539, 710, 750, 1311
BseNI	ACTGG	5 cut(s)	394, 439, 821, 1051, 1223
BseRI	GAGGAG	2 cut(s)	513, 975
BseSI	GKGCMC	2 cut(s)	1043, 1218
BseXI	GCAGC	4 cut(s)	283, 932, 976, 1264
BseYI	CCCAGC	1 cut(s)	60
Bsh1236I	CGCG	1 cut(s)	192
BshFI	GGCC	7 cut(s)	35, 318, 842, 896, 908, 998, 1106
BshNI	GGYRCC	3 cut(s)	778, 970, 1038
BsiHKAI	GWGCWC	3 cut(s)	591, 742, 1218
BsiHKCI	CYCGRG	1 cut(s)	266
BsiSI	CCGG	6 cut(s)	36, 168, 174, 240, 367, 893
BslFI	GGGAC	2 cut(s)	170, 445
BslI	CCNNNNNNNGG	2 cut(s)	926, 1288
BsmAI	GTCTC	2 cut(s)	129, 655
BsmBI	CGTCTC	1 cut(s)	129
BsmFI	GGGAC	2 cut(s)	170, 445
BsmI	GAATGC	2 cut(s)	87, 991
BsnI	GGCC	7 cut(s)	35, 318, 842, 896, 908, 998, 1106
Bso31I	GGTCTC	1 cut(s)	655
BsoBI	CYCGRG	1 cut(s)	266
Bsp1286I	GDGCHC	5 cut(s)	216, 591, 742, 1043, 1218
Bsp13I	TCCGGA	1 cut(s)	366
Bsp1407I	TGTACA	1 cut(s)	954
Bsp1720I	GCTNAGC	1 cut(s)	1200
BspACI	CCGC	7 cut(s)	129, 132, 190, 282, 297, 377, 640
BspANI	GGCC	7 cut(s)	35, 318, 842, 896, 908, 998, 1106
BspCNI	CTCAG	4 cut(s)	538, 709, 751, 1312
BspEI	TCCGGA	1 cut(s)	366
BspFNI	CGCG	1 cut(s)	192
BspLI	GGNNCC	6 cut(s)	172, 213, 365, 780, 972, 1040
BspPI	GGATC	8 cut(s)	213, 354, 358, 366, 371, 445, 457, 911
BspT107I	GGYRCC	3 cut(s)	778, 970, 1038
BspTNI	GGTCTC	1 cut(s)	655
BsrFI	RCCGGY	1 cut(s)	892
BsrGI	TGTACA	1 cut(s)	954
BsrI	ACTGG	5 cut(s)	394, 439, 821, 1051, 1223
BssAI	RCCGGY	1 cut(s)	892
BssECI	CCNNGG	2 cut(s)	920, 1107
BssNI	GRCGYC	2 cut(s)	141, 294
BssT1I	CCWWGG	2 cut(s)	920, 1107
Bst2UI	CCWGG	2 cut(s)	461, 1092
Bst4CI	ACNGT	7 cut(s)	124, 220, 251, 386, 511, 560, 1084
Bst6I	CTCTTC	1 cut(s)	1236
BstACI	GRCGYC	2 cut(s)	141, 294
BstAPI	GCANNNNNTGC	1 cut(s)	57
BstAUI	TGTACA	1 cut(s)	954
BstC8I	GCNNGC	5 cut(s)	58, 375, 894, 943, 1206
BstDEI	CTNAG	6 cut(s)	495, 525, 696, 759, 1200, 1320
BstENI	CCTNNNNNAGG	1 cut(s)	1286
BstF5I	GGATG	4 cut(s)	18, 809, 985, 1345
BstFNI	CGCG	1 cut(s)	192
BstH2I	RGCGCY	1 cut(s)	885
BstHHI	GCGC	2 cut(s)	194, 884
BstMAI	GTCTC	2 cut(s)	129, 655
BstMWI	GCNNNNNNNGC	6 cut(s)	57, 100, 586, 839, 995, 1205
BstNI	CCWGG	2 cut(s)	461, 1092
BstSCI	CCNGG	2 cut(s)	459, 1090
BstSLI	GKGCMC	2 cut(s)	1043, 1218
BstUI	CGCG	1 cut(s)	192
BstV1I	GCAGC	4 cut(s)	283, 932, 976, 1264
BstX2I	RGATCY	5 cut(s)	205, 346, 363, 437, 449
BstYI	RGATCY	5 cut(s)	205, 346, 363, 437, 449
Bsu36I	CCTNAGG	1 cut(s)	525
BsuRI	GGCC	7 cut(s)	35, 318, 842, 896, 908, 998, 1106
BtrI	CACGTC	1 cut(s)	184
BtsCI	GGATG	4 cut(s)	18, 809, 985, 1345
BtsI	GCAGTG	1 cut(s)	714
BtsIMutI	CAGTG	7 cut(s)	166, 507, 565, 591, 714, 828, 1216
Cac8I	GCNNGC	5 cut(s)	58, 375, 894, 943, 1206
CfoI	GCGC	2 cut(s)	194, 884
Cfr10I	RCCGGY	1 cut(s)	892
Cfr13I	GGNCC	2 cut(s)	237, 1017
CseI	GACGC	2 cut(s)	149, 302
CsiI	ACCWGGT	1 cut(s)	1090
Csp6I	GTAC	5 cut(s)	387, 955, 971, 1088, 1348
CspCI	CAANNNNNGTGG	2 cut(s)	1132, 1167
CviAII	CATG	5 cut(s)	416, 802, 848, 926, 1129
CviQI	GTAC	5 cut(s)	387, 955, 971, 1088, 1348
DdeI	CTNAG	6 cut(s)	495, 525, 696, 759, 1200, 1320
DrdI	GACNNNNNNGTC	1 cut(s)	122
DseDI	GACNNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	3 cut(s)	906, 996, 1104
Eam1104I	CTCTTC	1 cut(s)	1236
EarI	CTCTTC	1 cut(s)	1236
EciI	GGCGGA	1 cut(s)	147
Eco130I	CCWWGG	2 cut(s)	920, 1107
Eco147I	AGGCCT	1 cut(s)	842
Eco24I	GRGCYC	1 cut(s)	216
Eco31I	GGTCTC	1 cut(s)	655
Eco32I	GATATC	1 cut(s)	634
Eco47I	GGWCC	2 cut(s)	237, 1017
Eco57I	CTGAAG	2 cut(s)	142, 1176
Eco81I	CCTNAGG	1 cut(s)	525
Eco88I	CYCGRG	1 cut(s)	266
EcoNI	CCTNNNNNAGG	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	792
EcoRII	CCWGG	2 cut(s)	459, 1090
EcoRV	GATATC	1 cut(s)	634
EcoT14I	CCWWGG	2 cut(s)	920, 1107
EcoT38I	GRGCYC	1 cut(s)	216
ErhI	CCWWGG	2 cut(s)	920, 1107
Esp3I	CGTCTC	1 cut(s)	129
FaeI	CATG	5 cut(s)	419, 805, 851, 929, 1132
FaqI	GGGAC	2 cut(s)	170, 445
FatI	CATG	5 cut(s)	415, 801, 847, 925, 1128
FauI	CCCGC	1 cut(s)	197
FbaI	TGATCA	1 cut(s)	1174
Fnu4HI	GCNGC	8 cut(s)	130, 272, 283, 297, 640, 946, 990, 1278
FokI	GGATG	3 cut(s)	5, 796, 992
FriOI	GRGCYC	1 cut(s)	216
Fsp4HI	GCNGC	8 cut(s)	130, 272, 283, 297, 640, 946, 990, 1278
FspBI	CTAG	5 cut(s)	789, 921, 1146, 1263, 1351
GlaI	GCGC	2 cut(s)	193, 883
GluI	GCNGC	8 cut(s)	130, 272, 283, 297, 640, 946, 990, 1278
GsaI	CCCAGC	1 cut(s)	64
GsuI	CTGGAG	2 cut(s)	230, 482
HaeII	RGCGCY	1 cut(s)	885
HaeIII	GGCC	7 cut(s)	35, 318, 842, 896, 908, 998, 1106
HapII	CCGG	6 cut(s)	36, 168, 174, 240, 367, 893
HgaI	GACGC	2 cut(s)	149, 302
HhaI	GCGC	2 cut(s)	194, 884
Hin1I	GRCGYC	2 cut(s)	141, 294
Hin1II	CATG	5 cut(s)	419, 805, 851, 929, 1132
Hin6I	GCGC	2 cut(s)	192, 882
HinP1I	GCGC	2 cut(s)	192, 882
HindIII	AAGCTT	2 cut(s)	371, 497
HinfI	GANTC	3 cut(s)	39, 504, 1313
HpaII	CCGG	6 cut(s)	36, 168, 174, 240, 367, 893
HphI	GGTGA	7 cut(s)	244, 865, 1109, 1241, 1259, 1337, 1346
Hpy166II	GTNNAC	4 cut(s)	478, 514, 570, 1216
Hpy188I	TCNGA	5 cut(s)	363, 425, 1116, 1191, 1258
Hpy188III	TCNNGA	5 cut(s)	209, 367, 611, 766, 1006
Hpy8I	GTNNAC	4 cut(s)	478, 514, 570, 1216
Hpy99I	CGWCG	4 cut(s)	128, 143, 230, 425
HpyAV	CCTTC	4 cut(s)	154, 163, 832, 1282
HpyCH4III	ACNGT	7 cut(s)	124, 220, 251, 386, 511, 560, 1084
HpyCH4IV	ACGT	1 cut(s)	183
HpyCH4V	TGCA	4 cut(s)	12, 818, 1128, 1216
HpyF10VI	GCNNNNNNNGC	6 cut(s)	57, 100, 586, 839, 995, 1205
HpyF3I	CTNAG	6 cut(s)	495, 525, 696, 759, 1200, 1320
HpySE526I	ACGT	1 cut(s)	183
Hsp92I	GRCGYC	2 cut(s)	141, 294
Hsp92II	CATG	5 cut(s)	419, 805, 851, 929, 1132
HspAI	GCGC	2 cut(s)	192, 882
Kpn2I	TCCGGA	1 cut(s)	366
KpnI	GGTACC	1 cut(s)	974
KroI	GCCGGC	1 cut(s)	892
KroNI	GCCGGC	1 cut(s)	894
Ksp22I	TGATCA	1 cut(s)	1174
LmnI	GCTCC	6 cut(s)	64, 170, 211, 462, 586, 737
Lsp1109I	GCAGC	4 cut(s)	283, 932, 976, 1264
LweI	GCATC	1 cut(s)	21
MabI	ACCWGGT	1 cut(s)	1090
MaeI	CTAG	5 cut(s)	789, 921, 1146, 1263, 1351
MaeII	ACGT	1 cut(s)	183
MaeIII	GTNAC	3 cut(s)	113, 754, 1097
MboII	GAAGA	5 cut(s)	148, 499, 1253, 1310, 1340
MflI	RGATCY	5 cut(s)	205, 346, 363, 437, 449
MhlI	GDGCHC	5 cut(s)	216, 591, 742, 1043, 1218
MlsI	TGGCCA	3 cut(s)	908, 998, 1106
MluCI	AATT	1 cut(s)	792
MluNI	TGGCCA	3 cut(s)	908, 998, 1106
MlyI	GAGTC	1 cut(s)	1322
MmeI	TCCRAC	2 cut(s)	403, 1290
Mox20I	TGGCCA	3 cut(s)	908, 998, 1106
MroI	TCCGGA	1 cut(s)	366
MroNI	GCCGGC	1 cut(s)	892
MscI	TGGCCA	3 cut(s)	908, 998, 1106
MslI	CAYNNNNRTG	3 cut(s)	594, 596, 1221
Msp20I	TGGCCA	3 cut(s)	908, 998, 1106
MspA1I	CMGCKG	3 cut(s)	256, 282, 1319
MspI	CCGG	6 cut(s)	36, 168, 174, 240, 367, 893
MspR9I	CCNGG	2 cut(s)	461, 1092
Mva1269I	GAATGC	2 cut(s)	87, 991
MvaI	CCWGG	2 cut(s)	461, 1092
MvnI	CGCG	1 cut(s)	192
MwoI	GCNNNNNNNGC	6 cut(s)	57, 100, 586, 839, 995, 1205
NaeI	GCCGGC	1 cut(s)	894
NgoMIV	GCCGGC	1 cut(s)	892
NlaIII	CATG	5 cut(s)	419, 805, 851, 929, 1132
NlaIV	GGNNCC	6 cut(s)	172, 213, 365, 780, 972, 1040
NmeAIII	GCCGAG	2 cut(s)	135, 859
NmuCI	GTSAC	3 cut(s)	113, 754, 1097
OliI	CACNNNNGTG	1 cut(s)	596
PceI	AGGCCT	1 cut(s)	842
PctI	GAATGC	2 cut(s)	87, 991
PdiI	GCCGGC	1 cut(s)	894
PfeI	GAWTC	2 cut(s)	39, 504
PfoI	TCCNGGA	1 cut(s)	459
PkrI	GCNGC	8 cut(s)	131, 273, 284, 298, 641, 947, 991, 1279
PleI	GAGTC	1 cut(s)	1321
PpsI	GAGTC	1 cut(s)	1321
Psp6I	CCWGG	2 cut(s)	459, 1090
PspFI	CCCAGC	1 cut(s)	60
PspGI	CCWGG	2 cut(s)	459, 1090
PspN4I	GGNNCC	6 cut(s)	172, 213, 365, 780, 972, 1040
PspPI	GGNCC	2 cut(s)	237, 1017
PsuI	RGATCY	5 cut(s)	205, 346, 363, 437, 449
PvuII	CAGCTG	2 cut(s)	256, 1319
RsaI	GTAC	5 cut(s)	388, 956, 972, 1089, 1349
RsaNI	GTAC	5 cut(s)	387, 955, 971, 1088, 1348
RseI	CAYNNNNRTG	3 cut(s)	594, 596, 1221
SatI	GCNGC	8 cut(s)	130, 272, 283, 297, 640, 946, 990, 1278
Sau96I	GGNCC	2 cut(s)	237, 1017
ScaI	AGTACT	1 cut(s)	1349
SchI	GAGTC	1 cut(s)	1322
ScrFI	CCNGG	2 cut(s)	461, 1092
SduI	GDGCHC	5 cut(s)	216, 591, 742, 1043, 1218
SexAI	ACCWGGT	1 cut(s)	1090
SfaNI	GCATC	1 cut(s)	21
SinI	GGWCC	2 cut(s)	237, 1017
SmiMI	CAYNNNNRTG	3 cut(s)	594, 596, 1221
SmlI	CTYRAG	1 cut(s)	1283
SmoI	CTYRAG	1 cut(s)	1283
SpeI	ACTAGT	1 cut(s)	1145
Sse9I	AATT	1 cut(s)	792
SseBI	AGGCCT	1 cut(s)	842
SsiI	CCGC	7 cut(s)	129, 132, 190, 282, 297, 377, 640
SspMI	CTAG	5 cut(s)	789, 921, 1146, 1263, 1351
StuI	AGGCCT	1 cut(s)	842
StyD4I	CCNGG	2 cut(s)	459, 1090
StyI	CCWWGG	2 cut(s)	920, 1107
TaaI	ACNGT	7 cut(s)	124, 220, 251, 386, 511, 560, 1084
TaiI	ACGT	1 cut(s)	186
TaqI	TCGA	3 cut(s)	78, 225, 533
TaqII	GACCGA	1 cut(s)	17
TasI	AATT	1 cut(s)	792
TatI	WGTACW	3 cut(s)	386, 954, 1347
TauI	GCSGC	4 cut(s)	132, 285, 299, 642
TfiI	GAWTC	2 cut(s)	39, 504
TscAI	CASTG	7 cut(s)	166, 514, 565, 598, 721, 828, 1223
TseFI	GTSAC	3 cut(s)	113, 754, 1097
TseI	GCWGC	4 cut(s)	271, 945, 989, 1277
Tsp45I	GTSAC	3 cut(s)	113, 754, 1097
TspDTI	ATGAA	5 cut(s)	633, 785, 790, 798, 1311
TspRI	CASTG	7 cut(s)	166, 514, 565, 598, 721, 828, 1223
VneI	GTGCAC	1 cut(s)	1214
VpaK11BI	GGWCC	2 cut(s)	237, 1017
XagI	CCTNNNNNAGG	1 cut(s)	1286
XapI	RAATTY	1 cut(s)	792
XcmI	CCANNNNNNNNNTGG	2 cut(s)	326, 1027
XmaJI	CCTAGG	1 cut(s)	920
XspI	CTAG	5 cut(s)	789, 921, 1146, 1263, 1351
ZrmI	AGTACT	1 cut(s)	1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.