Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

17185306 .. 17190728

Gene Structure 5423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1068100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGATGCAGTGCAGGTTGTGAAAAGTTCATCACCACCTTCCCATGAAGGAATTCATATTGTGAGGGCAGCAATAAGGCTTCTAGCAATATTTGTAGTGTTTCCGGGGACTCTTTTAATTTGGCTCATGATGCCTACCAACACATATAGGCAAATTTGGCTGCCTCAAATCAGACTAAAGGCTAGCTCAAGTACCTATTTGGGAGCAGAAGGTGGAACAATTCTGGTGTACACATTTCCCATTTTGTTCATTGCGGTGTTGGGTTGTGTGTATCTTCATCTGGGAAAGAAGTTGAATAACCATGAACTGAAAAGTGGAACAAAGAAGAATCGGTTTGCTGTATGGAAACAACCTATGCTGGTGAAAGGCCCCTTAGGAATTGTTTCTGGGATAGAGCTGGCCTTTTTCGTGATGTTCATTACACTCCTGGTGTGGTCTTTGTCAACATATTTGCACAACAAGTTTAAGAACATCACCACACAATCAGCAGCAAAACACCACGAACAAGTATGGGAATCTAAATTGGATAGTGCAGCATTGGTTCTGGGGCTTGCGGGGAACGTATGCCTTGCATTTCTTTTCTTTCCTCTGGCACGTGGCTCTTCGGTTCTGGCACTTTTTGGTCTCACCTCTGAAGGTAGCATCAAGTACCATATCTGGCTTGGACACATAGTCCTGGCATTCTTCACTGCTCATGGCCTTTGTTACATCATTTACTGGGCTGCTACTGAACAAATTTCCCAGATGGTAATATGGGATAAGGTTGGCGTTTCAAATGTAGCTGGAGAGCTGGCTTTGCTCTCTGGACTGTTCATGTGGGCGACTGCCATCCCTCGCATTAGACGTAAAATGTTTGAGCTCTTCTTCTACACTCATTACCTTTACATCCTCTTCATGTTCTTCTTTATCCTTCACGTTGGCATCGCCTATGCTTGCATTGCGCTCCCCAGTTTCTACCTCTTCTTGGTTGATCGTTACCTGAGATTCTTACAATCCCGAACCAGCACACGATTAATCTTTGCACGTGTTTTGCCAAGCGAAACCCTAGAGCTCAACTTGGCCAAGACCCCAGGGCTGAAATATAATCCAACAAGCGTCATGTTCATAAACGTTCCTAGTATTTCTAAGATGCAGTGGCATCCTTTTACTGTTACTTCCAACAGTAGCTTGGAACCAGAAAAGATTAGCATCGTTGTCAAAGGTGAAGGAAGTTGGAGCAAGAAGCTATACCAAATGCTTTCATCCCCTTCTCCAACCGATCGGATTGAGGTCGCAGTTGAAGGGCCTTATGGACCTGCTTCAACTCATTTTCTAAGGCATGACACCCTTGTAATGGTGAGTGGAGGCAGCGGAATTACCCCATTCATCTCCATAATCCGAGAGCTCCTCCTGCTGAGTACATCATTCACCTACAAGGTTCCGAAAGTGGTCTTAATCTGTGCATTTAAAAATTCATTGGACCTCACCATGCTAGACCTAATTCTTCCAATGTCCAGCACCTCAATCGACATGTCCAACCTGAATCTCCAAATCGAGGCTTACGTGACAAGAGAGACAGAACCAAAAACAGATGGCTCGAAGCCTGTTAGATCCATATGGTTCAAACCAAATGCAACTGATGCACCTGTATCACCAATTTTGGGCACAAACCACTGGCTCTGGCTTGCCCTCATAATTTCATCTTCCTTCGTCGTGTTCCTTATCTTGATCGGGACCATTACGCGCTACTACATTTACCCTATTGATCACAATTCGAACACGATATTTTCGTATTCTCTAAGAGCTGTGCTTAACATATTGGTGATATGTGTTTCCATAGCCTCAACAGCTAGTGGAGCAGTTTTATGGAACAAGAAAAAGAACGCTATGGAAAATAAGCAGATTCAGAACATGGAAGGGCCATCTCCAATGGGGACACCACAGTCACTGTATTACAATGCCGACAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTACACAAGCAACAAATGTGCACTATGGTGAAAGACCAGACCTCAAGAAGGTGATATTTGAGTGCAAAGAATCAAGTATTGGAGTTCTTGCGAGTGGTCCGAAGAAAATGAGGCATGAAGTTGCAACCATTTGTTCGTCGGGTTTGGCAGAAAATCTGCATTTTGAGTCCATTAGTTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

721

Amino Acids

80.58

Weight (kDa)

9.3

Isoelectric Point (pI)

42.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	182 - 302	1.7e-18	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	338 - 434	4.5e-24	FAD-binding domain
NAD_binding_6	PF08030	440 - 703	2.7e-19	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1921
Acc36I	ACCTGC	2 cut(s)	4, 1303
AccII	CGCG	1 cut(s)	1723
AciI	CCGC	3 cut(s)	254, 554, 1350
AclI	AACGTT	1 cut(s)	1110
AclWI	GGATC	1 cut(s)	1584
AcoI	YGGCCR	1 cut(s)	1059
AcsI	RAATTY	4 cut(s)	51, 153, 735, 1450
AcuI	CTGAAG	1 cut(s)	654
AcvI	CACGTG	2 cut(s)	596, 1025
AfaI	GTAC	4 cut(s)	193, 230, 650, 1399
AfiI	CCNNNNNNNGG	5 cut(s)	964, 1333, 1534, 1640, 2023
AflIII	ACRYGT	2 cut(s)	1024, 1509
AgsI	TTSAA	5 cut(s)	295, 774, 1280, 1302, 1603
AhdI	GACNNNNNGTC	1 cut(s)	671
AjnI	CCWGG	3 cut(s)	426, 675, 1069
AjuI	GAANNNNNNNTTGG	2 cut(s)	2037, 2069
AleI	CACNNNNGTG	1 cut(s)	2001
Alw21I	GWGCWC	4 cut(s)	861, 1053, 1386, 1998
Alw26I	GTCTC	3 cut(s)	629, 1547, 1977
Alw44I	GTGCAC	1 cut(s)	1994
AlwI	GGATC	1 cut(s)	1584
AlwNI	CAGNNNCTG	1 cut(s)	1927
AoxI	GGCC	6 cut(s)	367, 399, 697, 1059, 1283, 1898
ApaLI	GTGCAC	1 cut(s)	1994
ApeKI	GCWGC	6 cut(s)	68, 160, 488, 533, 722, 1347
ApoI	RAATTY	4 cut(s)	51, 153, 735, 1450
AseI	ATTAAT	1 cut(s)	1013
Asp700I	GAANNNNTTC	3 cut(s)	51, 382, 1959
AspLEI	GCGC	2 cut(s)	943, 1725
AspS9I	GGNCC	7 cut(s)	368, 1283, 1292, 1459, 1713, 1898, 2072
AsuC2I	CCSGG	1 cut(s)	105
AsuII	TTCGAA	1 cut(s)	1754
AsuNHI	GCTAGC	1 cut(s)	182
AvaII	GGWCC	4 cut(s)	1292, 1459, 1713, 2072
AxyI	CCTNAGG	1 cut(s)	373
BaeGI	GKGCMC	2 cut(s)	1646, 1998
BalI	TGGCCA	1 cut(s)	1061
BanII	GRGCYC	3 cut(s)	861, 1053, 1386
BbrPI	CACGTG	2 cut(s)	596, 1025
Bbv12I	GWGCWC	4 cut(s)	861, 1053, 1386, 1998
BbvI	GCAGC	6 cut(s)	80, 147, 500, 545, 709, 1359
BccI	CCATC	4 cut(s)	739, 836, 1565, 1909
BcgI	CGANNNNNNTGC	2 cut(s)	1486, 1520
BciT130I	CCWGG	3 cut(s)	428, 677, 1071
BclI	TGATCA	1 cut(s)	1744
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	3 cut(s)	629, 1547, 1977
BfaI	CTAG	6 cut(s)	83, 183, 1046, 1116, 1472, 1830
BfuAI	ACCTGC	2 cut(s)	4, 1303
BisI	GCNGC	6 cut(s)	69, 161, 489, 534, 723, 1348
BlsI	GCNGC	6 cut(s)	70, 162, 490, 535, 724, 1349
Bme1390I	CCNGG	4 cut(s)	105, 428, 677, 1071
Bme18I	GGWCC	4 cut(s)	1292, 1459, 1713, 2072
BmeRI	GACNNNNNGTC	1 cut(s)	671
BmgT120I	GGNCC	7 cut(s)	368, 1283, 1292, 1459, 1713, 1898, 2072
BmiI	GGNNCC	4 cut(s)	370, 1173, 1419, 1714
BmrFI	CCNGG	4 cut(s)	105, 428, 677, 1071
BmrI	ACTGGG	2 cut(s)	727, 942
BmsI	GCATC	7 cut(s)	120, 651, 930, 1119, 1147, 1197, 1609
BmtI	GCTAGC	1 cut(s)	186
BmuI	ACTGGG	2 cut(s)	727, 942
BplI	GAGNNNNNCTC	2 cut(s)	1371, 1403
BpmI	CTGGAG	1 cut(s)	804
Bpu14I	TTCGAA	1 cut(s)	1754
BpuEI	CTTGAG	2 cut(s)	172, 2003
BpuMI	CCSGG	1 cut(s)	105
BsaAI	YACGTR	3 cut(s)	596, 1025, 1543
BsaBI	GATNNNNATC	1 cut(s)	1187
BsaI	GGTCTC	1 cut(s)	629
BsaJI	CCNNGG	3 cut(s)	104, 1069, 1070
Bsc4I	CCNNNNNNNGG	5 cut(s)	964, 1333, 1534, 1640, 2023
Bse1I	ACTGG	3 cut(s)	722, 948, 1658
Bse21I	CCTNAGG	1 cut(s)	373
Bse3DI	GCAATG	2 cut(s)	249, 936
Bse8I	GATNNNNATC	1 cut(s)	1187
BseBI	CCWGG	3 cut(s)	428, 677, 1071
BseDI	CCNNGG	3 cut(s)	104, 1069, 1070
BseGI	GGATG	5 cut(s)	10, 828, 885, 1138, 1241
BseJI	GATNNNNATC	1 cut(s)	1187
BseLI	CCNNNNNNNGG	5 cut(s)	964, 1333, 1534, 1640, 2023
BseMI	GCAATG	2 cut(s)	249, 936
BseMII	CTCAG	2 cut(s)	971, 1385
BseNI	ACTGG	3 cut(s)	722, 948, 1658
BseRI	GAGGAG	1 cut(s)	1376
BseSI	GKGCMC	2 cut(s)	1646, 1998
BseXI	GCAGC	6 cut(s)	80, 147, 500, 545, 709, 1359
BsgI	GTGCAG	2 cut(s)	32, 552
Bsh1236I	CGCG	1 cut(s)	1723
Bsh1285I	CGRYCG	1 cut(s)	1261
BshFI	GGCC	6 cut(s)	369, 401, 699, 1061, 1285, 1900
BsiEI	CGRYCG	1 cut(s)	1261
BsiHKAI	GWGCWC	4 cut(s)	861, 1053, 1386, 1998
BsiSI	CCGG	1 cut(s)	104
BslFI	GGGAC	3 cut(s)	121, 1726, 1927
BslI	CCNNNNNNNGG	5 cut(s)	964, 1333, 1534, 1640, 2023
BsmAI	GTCTC	3 cut(s)	629, 1547, 1977
BsmFI	GGGAC	3 cut(s)	121, 1726, 1927
BsmI	GAATGC	1 cut(s)	680
BsnI	GGCC	6 cut(s)	369, 401, 699, 1061, 1285, 1900
Bso31I	GGTCTC	1 cut(s)	629
Bsp119I	TTCGAA	1 cut(s)	1754
Bsp1286I	GDGCHC	5 cut(s)	861, 1053, 1386, 1646, 1998
Bsp1407I	TGTACA	1 cut(s)	228
Bsp143I	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
BspACI	CCGC	3 cut(s)	254, 554, 1350
BspANI	GGCC	6 cut(s)	369, 401, 699, 1061, 1285, 1900
BspCNI	CTCAG	2 cut(s)	972, 1386
BspFNI	CGCG	1 cut(s)	1723
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	4 cut(s)	370, 1173, 1419, 1714
BspMI	ACCTGC	2 cut(s)	4, 1303
BspOI	GCTAGC	1 cut(s)	186
BspPI	GGATC	1 cut(s)	1584
BspQI	GCTCTTC	2 cut(s)	607, 866
BspT104I	TTCGAA	1 cut(s)	1754
BspTNI	GGTCTC	1 cut(s)	629
BsrDI	GCAATG	2 cut(s)	249, 936
BsrGI	TGTACA	1 cut(s)	228
BsrI	ACTGG	3 cut(s)	722, 948, 1658
BssECI	CCNNGG	3 cut(s)	104, 1069, 1070
BssMI	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
Bst2UI	CCWGG	3 cut(s)	428, 677, 1071
Bst4CI	ACNGT	6 cut(s)	810, 1150, 1163, 1923, 1929, 1971
Bst6I	CTCTTC	4 cut(s)	607, 866, 896, 965
BstAPI	GCANNNNNTGC	1 cut(s)	1619
BstAUI	TGTACA	1 cut(s)	228
BstBAI	YACGTR	3 cut(s)	596, 1025, 1543
BstBI	TTCGAA	1 cut(s)	1754
BstC8I	GCNNGC	6 cut(s)	184, 399, 552, 792, 934, 1665
BstDEI	CTNAG	6 cut(s)	373, 980, 1125, 1313, 1394, 1778
BstENI	CCTNNNNNAGG	1 cut(s)	2021
BstF5I	GGATG	5 cut(s)	10, 828, 885, 1138, 1241
BstFNI	CGCG	1 cut(s)	1723
BstHHI	GCGC	2 cut(s)	943, 1725
BstKTI	GATC	5 cut(s)	973, 1261, 1592, 1710, 1747
BstMAI	GTCTC	3 cut(s)	629, 1547, 1977
BstMBI	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
BstMCI	CGRYCG	1 cut(s)	1261
BstMWI	GCNNNNNNNGC	8 cut(s)	130, 157, 796, 938, 1390, 1619, 1826, 1835
BstNI	CCWGG	3 cut(s)	428, 677, 1071
BstNSI	RCATGY	1 cut(s)	1513
BstSCI	CCNGG	4 cut(s)	103, 426, 675, 1069
BstSLI	GKGCMC	2 cut(s)	1646, 1998
BstUI	CGCG	1 cut(s)	1723
BstV1I	GCAGC	6 cut(s)	80, 147, 500, 545, 709, 1359
BstX2I	RGATCY	1 cut(s)	1589
BstYI	RGATCY	1 cut(s)	1589
Bsu36I	CCTNAGG	1 cut(s)	373
BsuRI	GGCC	6 cut(s)	369, 401, 699, 1061, 1285, 1900
BtgZI	GCGATG	1 cut(s)	907
BtsCI	GGATG	5 cut(s)	10, 828, 885, 1138, 1241
BtsI	GCAGTG	3 cut(s)	15, 687, 1139
BtsIMutI	CAGTG	5 cut(s)	15, 687, 1139, 1651, 1925
BveI	ACCTGC	2 cut(s)	4, 1303
Cac8I	GCNNGC	6 cut(s)	184, 399, 552, 792, 934, 1665
CaiI	CAGNNNCTG	1 cut(s)	1927
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	2 cut(s)	943, 1725
Cfr13I	GGNCC	7 cut(s)	368, 1283, 1292, 1459, 1713, 1898, 2072
CseI	GACGC	1 cut(s)	1084
Csp6I	GTAC	4 cut(s)	192, 229, 649, 1398
CviQI	GTAC	4 cut(s)	192, 229, 649, 1398
DdeI	CTNAG	6 cut(s)	373, 980, 1125, 1313, 1394, 1778
DpnI	GATC	5 cut(s)	972, 1260, 1591, 1709, 1746
DpnII	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
DraI	TTTAAA	1 cut(s)	1447
DrdI	GACNNNNNNGTC	1 cut(s)	1921
DriI	GACNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	1921
EaeI	YGGCCR	1 cut(s)	1059
Eam1104I	CTCTTC	4 cut(s)	607, 866, 896, 965
Eam1105I	GACNNNNNGTC	1 cut(s)	671
EarI	CTCTTC	4 cut(s)	607, 866, 896, 965
Ecl136II	GAGCTC	3 cut(s)	859, 1051, 1384
Eco24I	GRGCYC	3 cut(s)	861, 1053, 1386
Eco31I	GGTCTC	1 cut(s)	629
Eco47I	GGWCC	4 cut(s)	1292, 1459, 1713, 2072
Eco53kI	GAGCTC	3 cut(s)	859, 1051, 1384
Eco57I	CTGAAG	1 cut(s)	654
Eco72I	CACGTG	2 cut(s)	596, 1025
Eco81I	CCTNAGG	1 cut(s)	373
EcoICRI	GAGCTC	3 cut(s)	859, 1051, 1384
EcoNI	CCTNNNNNAGG	1 cut(s)	2021
EcoO109I	RGGNCCY	2 cut(s)	368, 1283
EcoRI	GAATTC	1 cut(s)	51
EcoRII	CCWGG	3 cut(s)	426, 675, 1069
EcoT38I	GRGCYC	3 cut(s)	861, 1053, 1386
FaqI	GGGAC	3 cut(s)	121, 1726, 1927
FauI	CCCGC	1 cut(s)	547
FauNDI	CATATG	1 cut(s)	1595
FbaI	TGATCA	1 cut(s)	1744
Fnu4HI	GCNGC	6 cut(s)	69, 161, 489, 534, 723, 1348
FokI	GGATG	5 cut(s)	17, 815, 872, 1125, 1228
FriOI	GRGCYC	3 cut(s)	861, 1053, 1386
Fsp4HI	GCNGC	6 cut(s)	69, 161, 489, 534, 723, 1348
FspBI	CTAG	6 cut(s)	83, 183, 1046, 1116, 1472, 1830
GlaI	GCGC	2 cut(s)	942, 1724
GluI	GCNGC	6 cut(s)	69, 161, 489, 534, 723, 1348
GsuI	CTGGAG	1 cut(s)	804
HaeIII	GGCC	6 cut(s)	369, 401, 699, 1061, 1285, 1900
HapII	CCGG	1 cut(s)	104
HgaI	GACGC	1 cut(s)	1084
HhaI	GCGC	2 cut(s)	943, 1725
Hin6I	GCGC	2 cut(s)	941, 1723
HinP1I	GCGC	2 cut(s)	941, 1723
HincII	GTYRAC	1 cut(s)	444
HindII	GTYRAC	1 cut(s)	444
HinfI	GANTC	8 cut(s)	109, 328, 515, 984, 1522, 1882, 2045, 2141
HpaII	CCGG	1 cut(s)	104
Hpy166II	GTNNAC	4 cut(s)	229, 231, 444, 1996
Hpy188I	TCNGA	7 cut(s)	173, 634, 1263, 1379, 1422, 1887, 2076
Hpy188III	TCNNGA	7 cut(s)	127, 409, 804, 996, 1705, 1711, 2020
Hpy8I	GTNNAC	4 cut(s)	229, 231, 444, 1996
Hpy99I	CGWCG	2 cut(s)	1694, 2116
HpyCH4III	ACNGT	6 cut(s)	810, 1150, 1163, 1923, 1929, 1971
HpyCH4IV	ACGT	7 cut(s)	561, 595, 844, 915, 1024, 1110, 1542
HpyF10VI	GCNNNNNNNGC	8 cut(s)	130, 157, 796, 938, 1390, 1619, 1826, 1835
HpyF3I	CTNAG	6 cut(s)	373, 980, 1125, 1313, 1394, 1778
HpySE526I	ACGT	7 cut(s)	561, 595, 844, 915, 1024, 1110, 1542
HspAI	GCGC	2 cut(s)	941, 1723
Ksp22I	TGATCA	1 cut(s)	1744
Kzo9I	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
LguI	GCTCTTC	2 cut(s)	607, 866
LmnI	GCTCC	5 cut(s)	203, 948, 1215, 1389, 1835
Lsp1109I	GCAGC	6 cut(s)	80, 147, 500, 545, 709, 1359
LweI	GCATC	7 cut(s)	120, 651, 930, 1119, 1147, 1197, 1609
MaeI	CTAG	6 cut(s)	83, 183, 1046, 1116, 1472, 1830
MaeII	ACGT	7 cut(s)	561, 595, 844, 915, 1024, 1110, 1542
MaeIII	GTNAC	5 cut(s)	704, 974, 1150, 1543, 1923
MalI	GATC	5 cut(s)	972, 1260, 1591, 1709, 1746
MboI	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
MflI	RGATCY	1 cut(s)	1589
MhlI	GDGCHC	5 cut(s)	861, 1053, 1386, 1646, 1998
MlsI	TGGCCA	1 cut(s)	1061
MluNI	TGGCCA	1 cut(s)	1061
MlyI	GAGTC	2 cut(s)	103, 2150
MmeI	TCCRAC	6 cut(s)	1112, 1182, 1193, 1277, 1539, 1932
Mox20I	TGGCCA	1 cut(s)	1061
MroXI	GAANNNNTTC	3 cut(s)	51, 382, 1959
MscI	TGGCCA	1 cut(s)	1061
MseI	TTAA	6 cut(s)	116, 465, 1013, 1433, 1446, 1791
MslI	CAYNNNNRTG	3 cut(s)	254, 1799, 2001
Msp20I	TGGCCA	1 cut(s)	1061
MspA1I	CMGCKG	1 cut(s)	1350
MspI	CCGG	1 cut(s)	104
MspR9I	CCNGG	4 cut(s)	105, 428, 677, 1071
Mva1269I	GAATGC	1 cut(s)	680
MvaI	CCWGG	3 cut(s)	428, 677, 1071
MvnI	CGCG	1 cut(s)	1723
MwoI	GCNNNNNNNGC	8 cut(s)	130, 157, 796, 938, 1390, 1619, 1826, 1835
NciI	CCSGG	1 cut(s)	105
NdeI	CATATG	1 cut(s)	1595
NdeII	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
NheI	GCTAGC	1 cut(s)	182
NlaIV	GGNNCC	4 cut(s)	370, 1173, 1419, 1714
NmuCI	GTSAC	2 cut(s)	1543, 1923
NspI	RCATGY	1 cut(s)	1513
NspV	TTCGAA	1 cut(s)	1754
OliI	CACNNNNGTG	1 cut(s)	2001
PagI	TCATGA	1 cut(s)	126
PasI	CCCWGGG	1 cut(s)	1070
PciI	ACATGT	1 cut(s)	1509
PciSI	GCTCTTC	2 cut(s)	607, 866
PcsI	WCGNNNNNNNCGW	3 cut(s)	841, 1539, 1766
PctI	GAATGC	1 cut(s)	680
PdmI	GAANNNNTTC	3 cut(s)	51, 382, 1959
PfeI	GAWTC	6 cut(s)	328, 515, 984, 1522, 1882, 2045
PkrI	GCNGC	6 cut(s)	70, 162, 490, 535, 724, 1349
Ple19I	CGATCG	1 cut(s)	1261
PleI	GAGTC	2 cut(s)	103, 2149
PmaCI	CACGTG	2 cut(s)	596, 1025
PmlI	CACGTG	2 cut(s)	596, 1025
PpsI	GAGTC	2 cut(s)	103, 2149
Ppu21I	YACGTR	3 cut(s)	596, 1025, 1543
PscI	ACATGT	1 cut(s)	1509
PshBI	ATTAAT	1 cut(s)	1013
Psp124BI	GAGCTC	3 cut(s)	861, 1053, 1386
Psp1406I	AACGTT	1 cut(s)	1110
Psp6I	CCWGG	3 cut(s)	426, 675, 1069
PspCI	CACGTG	2 cut(s)	596, 1025
PspGI	CCWGG	3 cut(s)	426, 675, 1069
PspN4I	GGNNCC	4 cut(s)	370, 1173, 1419, 1714
PspPI	GGNCC	7 cut(s)	368, 1283, 1292, 1459, 1713, 1898, 2072
PstNI	CAGNNNCTG	1 cut(s)	1927
PsuI	RGATCY	1 cut(s)	1589
PvuI	CGATCG	1 cut(s)	1261
RsaI	GTAC	4 cut(s)	193, 230, 650, 1399
RsaNI	GTAC	4 cut(s)	192, 229, 649, 1398
RseI	CAYNNNNRTG	3 cut(s)	254, 1799, 2001
SacI	GAGCTC	3 cut(s)	861, 1053, 1386
SapI	GCTCTTC	2 cut(s)	607, 866
SaqAI	TTAA	6 cut(s)	116, 465, 1013, 1433, 1446, 1791
SatI	GCNGC	6 cut(s)	69, 161, 489, 534, 723, 1348
Sau3AI	GATC	5 cut(s)	970, 1258, 1589, 1707, 1744
Sau96I	GGNCC	7 cut(s)	368, 1283, 1292, 1459, 1713, 1898, 2072
SchI	GAGTC	2 cut(s)	103, 2150
ScrFI	CCNGG	4 cut(s)	105, 428, 677, 1071
SduI	GDGCHC	5 cut(s)	861, 1053, 1386, 1646, 1998
SfaNI	GCATC	7 cut(s)	120, 651, 930, 1119, 1147, 1197, 1609
SfuI	TTCGAA	1 cut(s)	1754
SinI	GGWCC	4 cut(s)	1292, 1459, 1713, 2072
SmiMI	CAYNNNNRTG	3 cut(s)	254, 1799, 2001
SmlI	CTYRAG	2 cut(s)	187, 2018
SmoI	CTYRAG	2 cut(s)	187, 2018
SsiI	CCGC	3 cut(s)	254, 554, 1350
SspI	AATATT	1 cut(s)	90
SspMI	CTAG	6 cut(s)	83, 183, 1046, 1116, 1472, 1830
SstI	GAGCTC	3 cut(s)	861, 1053, 1386
StyD4I	CCNGG	4 cut(s)	103, 426, 675, 1069
TaaI	ACNGT	6 cut(s)	810, 1150, 1163, 1923, 1929, 1971
TaiI	ACGT	7 cut(s)	564, 598, 847, 918, 1027, 1113, 1545
TaqI	TCGA	4 cut(s)	1506, 1533, 1577, 1754
TatI	WGTACW	2 cut(s)	228, 1397
TfiI	GAWTC	6 cut(s)	328, 515, 984, 1522, 1882, 2045
Tru1I	TTAA	6 cut(s)	116, 465, 1013, 1433, 1446, 1791
Tru9I	TTAA	6 cut(s)	116, 465, 1013, 1433, 1446, 1791
TscAI	CASTG	5 cut(s)	15, 694, 1139, 1658, 1932
TseFI	GTSAC	2 cut(s)	1543, 1923
TseI	GCWGC	6 cut(s)	68, 160, 488, 533, 722, 1347
Tsp45I	GTSAC	2 cut(s)	1543, 1923
TspRI	CASTG	5 cut(s)	15, 694, 1139, 1658, 1932
VneI	GTGCAC	1 cut(s)	1994
VpaK11BI	GGWCC	4 cut(s)	1292, 1459, 1713, 2072
VspI	ATTAAT	1 cut(s)	1013
XagI	CCTNNNNNAGG	1 cut(s)	2021
XapI	RAATTY	4 cut(s)	51, 153, 735, 1450
XceI	RCATGY	1 cut(s)	1513
XcmI	CCANNNNNNNNNTGG	2 cut(s)	659, 1165
XmnI	GAANNNNTTC	3 cut(s)	51, 382, 1959
XspI	CTAG	6 cut(s)	83, 183, 1046, 1116, 1472, 1830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.