Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

51331393 .. 51335099

Gene Structure 3707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG250200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGATATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGGTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATAGAAAGCAGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAGGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACATACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCGAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTATCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCTGGAGAGCTAGCTTTGCTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTTGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTACTTCAAACAGTAATTTGGAGCCAGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCTGTTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATCGAGCACAGTTCCTATAAGATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCCAAGGAATTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCAAGGGGTTCAGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCACCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

687

Amino Acids

77.26

Weight (kDa)

9.51

Isoelectric Point (pI)

41.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	152 - 272	1e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	306 - 403	7.1e-24	FAD-binding domain
NAD_binding_6	PF08030	410 - 670	8e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	210, 1836
Acc36I	ACCTGC	1 cut(s)	1780
AccI	GTMKAC	1 cut(s)	1403
AccII	CGCG	3 cut(s)	398, 919, 1290
AciI	CCGC	3 cut(s)	396, 398, 1288
AclWI	GGATC	1 cut(s)	1954
AcsI	RAATTY	1 cut(s)	609
AcuI	CTGAAG	1 cut(s)	1350
AcyI	GRCGYC	1 cut(s)	831
AdeI	CACNNNGTG	1 cut(s)	119
AfaI	GTAC	1 cut(s)	100
AfiI	CCNNNNNNNGG	4 cut(s)	85, 530, 805, 874
AgsI	TTSAA	9 cut(s)	9, 96, 202, 988, 1068, 1190, 1357, 1513, 1942
AjnI	CCWGG	5 cut(s)	856, 873, 905, 1127, 2014
AjuI	GAANNNNNNNTTGG	2 cut(s)	1311, 1343
Alw21I	GWGCWC	5 cut(s)	309, 594, 771, 1659, 1899
Alw26I	GTCTC	4 cut(s)	838, 931, 1458, 1878
Alw44I	GTGCAC	1 cut(s)	1895
AlwI	GGATC	1 cut(s)	1954
Ama87I	CYCGRG	3 cut(s)	933, 980, 1934
AoxI	GGCC	5 cut(s)	87, 532, 1193, 1311, 1576
ApaLI	GTGCAC	1 cut(s)	1895
ApeKI	GCWGC	4 cut(s)	1039, 1181, 1730, 1745
ApoI	RAATTY	1 cut(s)	609
Asp700I	GAANNNNTTC	1 cut(s)	1860
AspLEI	GCGC	3 cut(s)	756, 919, 1556
AspS9I	GGNCC	5 cut(s)	278, 1125, 1193, 1202, 1973
AsuC2I	CCSGG	3 cut(s)	945, 981, 982
AsuNHI	GCTAGC	2 cut(s)	548, 700
AvaI	CYCGRG	3 cut(s)	933, 980, 1934
AvaII	GGWCC	4 cut(s)	278, 1125, 1202, 1973
BaeGI	GKGCMC	1 cut(s)	1899
BanII	GRGCYC	3 cut(s)	309, 771, 1696
BauI	CACGAG	1 cut(s)	504
BbsI	GAAGAC	1 cut(s)	802
Bbv12I	GWGCWC	5 cut(s)	309, 594, 771, 1659, 1899
BbvI	GCAGC	4 cut(s)	1026, 1168, 1717, 1757
BccI	CCATC	3 cut(s)	160, 192, 2054
BceAI	ACGGC	2 cut(s)	244, 1326
BciT130I	CCWGG	5 cut(s)	858, 875, 907, 1129, 2016
BcnI	CCSGG	3 cut(s)	945, 981, 982
BcoDI	GTCTC	4 cut(s)	838, 931, 1458, 1878
BfmI	CTRYAG	1 cut(s)	1182
BfuAI	ACCTGC	1 cut(s)	1780
BisI	GCNGC	5 cut(s)	399, 1040, 1182, 1731, 1746
BlsI	GCNGC	5 cut(s)	400, 1041, 1183, 1732, 1747
Bme1390I	CCNGG	8 cut(s)	858, 875, 907, 945, 981, 982, 1129, 2016
Bme18I	GGWCC	4 cut(s)	278, 1125, 1202, 1973
BmeT110I	CYCGRG	3 cut(s)	933, 980, 1934
BmgT120I	GGNCC	5 cut(s)	278, 1125, 1193, 1202, 1973
BmiI	GGNNCC	2 cut(s)	279, 1083
BmrFI	CCNGG	8 cut(s)	858, 875, 907, 945, 981, 982, 1129, 2016
BmsI	GCATC	6 cut(s)	57, 452, 561, 1057, 1198, 1598
BmtI	GCTAGC	2 cut(s)	552, 704
BpiI	GAAGAC	1 cut(s)	802
BpmI	CTGGAG	2 cut(s)	714, 1418
BpuEI	CTTGAG	1 cut(s)	1904
BpuMI	CCSGG	3 cut(s)	945, 981, 982
BsaBI	GATNNNNATC	1 cut(s)	1622
BsaHI	GRCGYC	1 cut(s)	831
BsaI	GGTCTC	1 cut(s)	931
BsaJI	CCNNGG	7 cut(s)	84, 396, 856, 980, 1308, 1776, 1817
BsaWI	WCCGGW	1 cut(s)	496
Bsc4I	CCNNNNNNNGG	4 cut(s)	85, 530, 805, 874
Bse1I	ACTGG	2 cut(s)	679, 1568
Bse3DI	GCAATG	3 cut(s)	140, 156, 1049
Bse8I	GATNNNNATC	1 cut(s)	1622
BseBI	CCWGG	5 cut(s)	858, 875, 907, 1129, 2016
BseDI	CCNNGG	7 cut(s)	84, 396, 856, 980, 1308, 1776, 1817
BseGI	GGATG	4 cut(s)	72, 735, 795, 1048
BseJI	GATNNNNATC	1 cut(s)	1622
BseLI	CCNNNNNNNGG	4 cut(s)	85, 530, 805, 874
BseMI	GCAATG	3 cut(s)	140, 156, 1049
BseMII	CTCAG	2 cut(s)	534, 1510
BseNI	ACTGG	2 cut(s)	679, 1568
BseSI	GKGCMC	1 cut(s)	1899
BseXI	GCAGC	4 cut(s)	1026, 1168, 1717, 1757
BsgI	GTGCAG	1 cut(s)	1764
Bsh1236I	CGCG	3 cut(s)	398, 919, 1290
Bsh1285I	CGRYCG	1 cut(s)	1653
BshFI	GGCC	5 cut(s)	89, 534, 1195, 1313, 1578
BsiEI	CGRYCG	1 cut(s)	1653
BsiHKAI	GWGCWC	5 cut(s)	309, 594, 771, 1659, 1899
BsiHKCI	CYCGRG	3 cut(s)	933, 980, 1934
BsiSI	CCGG	3 cut(s)	497, 944, 981
BslFI	GGGAC	2 cut(s)	25, 963
BslI	CCNNNNNNNGG	4 cut(s)	85, 530, 805, 874
BsmAI	GTCTC	4 cut(s)	838, 931, 1458, 1878
BsmBI	CGTCTC	1 cut(s)	838
BsmFI	GGGAC	2 cut(s)	25, 963
BsmI	GAATGC	1 cut(s)	1352
BsnI	GGCC	5 cut(s)	89, 534, 1195, 1313, 1578
Bso31I	GGTCTC	1 cut(s)	931
BsoBI	CYCGRG	3 cut(s)	933, 980, 1934
Bsp1286I	GDGCHC	6 cut(s)	309, 594, 771, 1659, 1696, 1899
Bsp143I	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
BspACI	CCGC	3 cut(s)	396, 398, 1288
BspANI	GGCC	5 cut(s)	89, 534, 1195, 1313, 1578
BspCNI	CTCAG	2 cut(s)	535, 1509
BspFNI	CGCG	3 cut(s)	398, 919, 1290
BspHI	TCATGA	1 cut(s)	1599
BspLI	GGNNCC	2 cut(s)	279, 1083
BspMAI	CTGCAG	1 cut(s)	1186
BspMI	ACCTGC	1 cut(s)	1780
BspOI	GCTAGC	2 cut(s)	552, 704
BspPI	GGATC	1 cut(s)	1954
BspQI	GCTCTTC	4 cut(s)	398, 599, 776, 907
BspTNI	GGTCTC	1 cut(s)	931
BsrDI	GCAATG	3 cut(s)	140, 156, 1049
BsrI	ACTGG	2 cut(s)	679, 1568
BssECI	CCNNGG	7 cut(s)	84, 396, 856, 980, 1308, 1776, 1817
BssMI	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
BssNI	GRCGYC	1 cut(s)	831
BssSI	CACGAG	1 cut(s)	504
BssT1I	CCWWGG	3 cut(s)	84, 1776, 1817
Bst2BI	CACGAG	1 cut(s)	504
Bst2UI	CCWGG	5 cut(s)	858, 875, 907, 1129, 2016
Bst4CI	ACNGT	6 cut(s)	242, 371, 1060, 1073, 1661, 1872
Bst6I	CTCTTC	8 cut(s)	398, 494, 599, 776, 806, 875, 907, 1369
BstACI	GRCGYC	1 cut(s)	831
BstC8I	GCNNGC	5 cut(s)	550, 702, 844, 1292, 1325
BstDEI	CTNAG	3 cut(s)	543, 1223, 1496
BstDSI	CCRYGG	2 cut(s)	396, 1308
BstF5I	GGATG	4 cut(s)	72, 735, 795, 1048
BstFNI	CGCG	3 cut(s)	398, 919, 1290
BstHHI	GCGC	3 cut(s)	756, 919, 1556
BstKTI	GATC	6 cut(s)	643, 883, 1095, 1171, 1653, 1949
BstMAI	GTCTC	4 cut(s)	838, 931, 1458, 1878
BstMBI	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
BstMCI	CGRYCG	1 cut(s)	1653
BstMWI	GCNNNNNNNGC	7 cut(s)	228, 706, 753, 1045, 1736, 1745, 1795
BstNI	CCWGG	5 cut(s)	858, 875, 907, 1129, 2016
BstSCI	CCNGG	8 cut(s)	856, 873, 905, 943, 979, 980, 1127, 2014
BstSFI	CTRYAG	1 cut(s)	1182
BstSLI	GKGCMC	1 cut(s)	1899
BstUI	CGCG	3 cut(s)	398, 919, 1290
BstV1I	GCAGC	4 cut(s)	1026, 1168, 1717, 1757
BstV2I	GAAGAC	1 cut(s)	802
BsuRI	GGCC	5 cut(s)	89, 534, 1195, 1313, 1578
BtgI	CCRYGG	2 cut(s)	396, 1308
BtgZI	GCGATG	1 cut(s)	1137
BtsCI	GGATG	4 cut(s)	72, 735, 795, 1048
BtsI	GCAGTG	3 cut(s)	229, 1264, 1755
BtsIMutI	CAGTG	6 cut(s)	229, 1056, 1102, 1264, 1561, 1755
BveI	ACCTGC	1 cut(s)	1780
Cac8I	GCNNGC	5 cut(s)	550, 702, 844, 1292, 1325
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	3 cut(s)	756, 919, 1556
Cfr13I	GGNCC	5 cut(s)	278, 1125, 1193, 1202, 1973
Cfr42I	CCGCGG	1 cut(s)	399
Cfr9I	CCCGGG	1 cut(s)	980
CseI	GACGC	2 cut(s)	820, 994
CsiI	ACCWGGT	1 cut(s)	2014
Csp6I	GTAC	1 cut(s)	99
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	1 cut(s)	99
DdeI	CTNAG	3 cut(s)	543, 1223, 1496
DpnI	GATC	6 cut(s)	642, 882, 1094, 1170, 1652, 1948
DpnII	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
DraIII	CACNNNGTG	1 cut(s)	119
Eam1104I	CTCTTC	8 cut(s)	398, 494, 599, 776, 806, 875, 907, 1369
EarI	CTCTTC	8 cut(s)	398, 494, 599, 776, 806, 875, 907, 1369
Ecl136II	GAGCTC	2 cut(s)	307, 769
Eco130I	CCWWGG	3 cut(s)	84, 1776, 1817
Eco24I	GRGCYC	3 cut(s)	309, 771, 1696
Eco31I	GGTCTC	1 cut(s)	931
Eco47I	GGWCC	4 cut(s)	278, 1125, 1202, 1973
Eco53kI	GAGCTC	2 cut(s)	307, 769
Eco57I	CTGAAG	1 cut(s)	1350
Eco88I	CYCGRG	3 cut(s)	933, 980, 1934
EcoICRI	GAGCTC	2 cut(s)	307, 769
EcoO109I	RGGNCCY	2 cut(s)	278, 1193
EcoRII	CCWGG	5 cut(s)	856, 873, 905, 1127, 2014
EcoT14I	CCWWGG	3 cut(s)	84, 1776, 1817
EcoT22I	ATGCAT	1 cut(s)	2037
EcoT38I	GRGCYC	3 cut(s)	309, 771, 1696
ErhI	CCWWGG	3 cut(s)	84, 1776, 1817
Esp3I	CGTCTC	1 cut(s)	838
FaqI	GGGAC	2 cut(s)	25, 963
FauNDI	CATATG	4 cut(s)	473, 1417, 1453, 1505
FblI	GTMKAC	1 cut(s)	1403
Fnu4HI	GCNGC	5 cut(s)	399, 1040, 1182, 1731, 1746
FokI	GGATG	4 cut(s)	79, 742, 782, 1035
FriOI	GRGCYC	3 cut(s)	309, 771, 1696
Fsp4HI	GCNGC	5 cut(s)	399, 1040, 1182, 1731, 1746
GlaI	GCGC	3 cut(s)	755, 918, 1555
GluI	GCNGC	5 cut(s)	399, 1040, 1182, 1731, 1746
GsuI	CTGGAG	2 cut(s)	714, 1418
HaeIII	GGCC	5 cut(s)	89, 534, 1195, 1313, 1578
HapII	CCGG	3 cut(s)	497, 944, 981
HgaI	GACGC	2 cut(s)	820, 994
HhaI	GCGC	3 cut(s)	756, 919, 1556
Hin1I	GRCGYC	1 cut(s)	831
Hin6I	GCGC	3 cut(s)	754, 917, 1554
HinP1I	GCGC	3 cut(s)	754, 917, 1554
HindIII	AAGCTT	2 cut(s)	1133, 1325
HpaII	CCGG	3 cut(s)	497, 944, 981
Hpy166II	GTNNAC	6 cut(s)	113, 1308, 1404, 1897, 1973, 2012
Hpy188III	TCNNGA	5 cut(s)	714, 1435, 1600, 1615, 1921
Hpy8I	GTNNAC	6 cut(s)	113, 1308, 1404, 1897, 1973, 2012
Hpy99I	CGWCG	1 cut(s)	517
HpyCH4III	ACNGT	6 cut(s)	242, 371, 1060, 1073, 1661, 1872
HpyCH4IV	ACGT	1 cut(s)	1641
HpyF10VI	GCNNNNNNNGC	7 cut(s)	228, 706, 753, 1045, 1736, 1745, 1795
HpyF3I	CTNAG	3 cut(s)	543, 1223, 1496
HpySE526I	ACGT	1 cut(s)	1641
Hsp92I	GRCGYC	1 cut(s)	831
HspAI	GCGC	3 cut(s)	754, 917, 1554
KspI	CCGCGG	1 cut(s)	399
Kzo9I	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
LguI	GCTCTTC	4 cut(s)	398, 599, 776, 907
LmnI	GCTCC	2 cut(s)	858, 1081
Lsp1109I	GCAGC	4 cut(s)	1026, 1168, 1717, 1757
LweI	GCATC	6 cut(s)	57, 452, 561, 1057, 1198, 1598
MabI	ACCWGGT	1 cut(s)	2014
MaeII	ACGT	1 cut(s)	1641
MaeIII	GTNAC	8 cut(s)	224, 467, 614, 634, 884, 1060, 1336, 1456
MalI	GATC	6 cut(s)	642, 882, 1094, 1170, 1652, 1948
MboI	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
MhlI	GDGCHC	6 cut(s)	309, 594, 771, 1659, 1696, 1899
MluCI	AATT	8 cut(s)	91, 339, 431, 609, 1075, 1296, 1443, 1781
MlyI	GAGTC	3 cut(s)	945, 985, 2051
MmeI	TCCRAC	3 cut(s)	1022, 1103, 1833
Mph1103I	ATGCAT	1 cut(s)	2037
MroXI	GAANNNNTTC	1 cut(s)	1860
MseI	TTAA	3 cut(s)	1343, 1701, 1784
MslI	CAYNNNNRTG	4 cut(s)	161, 269, 728, 1019
MspA1I	CMGCKG	2 cut(s)	398, 1544
MspI	CCGG	3 cut(s)	497, 944, 981
MspR9I	CCNGG	8 cut(s)	858, 875, 907, 945, 981, 982, 1129, 2016
Mva1269I	GAATGC	1 cut(s)	1352
MvaI	CCWGG	5 cut(s)	858, 875, 907, 1129, 2016
MvnI	CGCG	3 cut(s)	398, 919, 1290
MwoI	GCNNNNNNNGC	7 cut(s)	228, 706, 753, 1045, 1736, 1745, 1795
NciI	CCSGG	3 cut(s)	945, 981, 982
NdeI	CATATG	4 cut(s)	473, 1417, 1453, 1505
NdeII	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
NheI	GCTAGC	2 cut(s)	548, 700
NlaIV	GGNNCC	2 cut(s)	279, 1083
NmuCI	GTSAC	4 cut(s)	224, 634, 1336, 1456
NsiI	ATGCAT	1 cut(s)	2037
PaeR7I	CTCGAG	1 cut(s)	1934
PagI	TCATGA	1 cut(s)	1599
PciSI	GCTCTTC	4 cut(s)	398, 599, 776, 907
PcsI	WCGNNNNNNNCGW	1 cut(s)	889
PctI	GAATGC	1 cut(s)	1352
PdmI	GAANNNNTTC	1 cut(s)	1860
PfeI	GAWTC	7 cut(s)	5, 51, 75, 894, 950, 1390, 1927
PfoI	TCCNGGA	1 cut(s)	905
PkrI	GCNGC	5 cut(s)	400, 1041, 1183, 1732, 1747
Ple19I	CGATCG	1 cut(s)	1653
PleI	GAGTC	3 cut(s)	944, 984, 2050
PpsI	GAGTC	3 cut(s)	944, 984, 2050
PpuMI	RGGWCCY	1 cut(s)	278
PsiI	TTATAA	2 cut(s)	210, 1836
Psp124BI	GAGCTC	2 cut(s)	309, 771
Psp5II	RGGWCCY	1 cut(s)	278
Psp6I	CCWGG	5 cut(s)	856, 873, 905, 1127, 2014
PspGI	CCWGG	5 cut(s)	856, 873, 905, 1127, 2014
PspN4I	GGNNCC	2 cut(s)	279, 1083
PspPI	GGNCC	5 cut(s)	278, 1125, 1193, 1202, 1973
PspPPI	RGGWCCY	1 cut(s)	278
PspXI	VCTCGAGB	1 cut(s)	1934
PstI	CTGCAG	1 cut(s)	1186
PvuI	CGATCG	1 cut(s)	1653
PvuII	CAGCTG	1 cut(s)	1544
RsaI	GTAC	1 cut(s)	100
RsaNI	GTAC	1 cut(s)	99
RseI	CAYNNNNRTG	4 cut(s)	161, 269, 728, 1019
SacI	GAGCTC	2 cut(s)	309, 771
SacII	CCGCGG	1 cut(s)	399
SapI	GCTCTTC	4 cut(s)	398, 599, 776, 907
SaqAI	TTAA	3 cut(s)	1343, 1701, 1784
SatI	GCNGC	5 cut(s)	399, 1040, 1182, 1731, 1746
Sau3AI	GATC	6 cut(s)	640, 880, 1092, 1168, 1650, 1946
Sau96I	GGNCC	5 cut(s)	278, 1125, 1193, 1202, 1973
SchI	GAGTC	3 cut(s)	945, 985, 2051
ScrFI	CCNGG	8 cut(s)	858, 875, 907, 945, 981, 982, 1129, 2016
SduI	GDGCHC	6 cut(s)	309, 594, 771, 1659, 1696, 1899
SexAI	ACCWGGT	1 cut(s)	2014
SfaNI	GCATC	6 cut(s)	57, 452, 561, 1057, 1198, 1598
SfcI	CTRYAG	1 cut(s)	1182
Sfr274I	CTCGAG	1 cut(s)	1934
Sfr303I	CCGCGG	1 cut(s)	399
SgrBI	CCGCGG	1 cut(s)	399
SinI	GGWCC	4 cut(s)	278, 1125, 1202, 1973
SlaI	CTCGAG	1 cut(s)	1934
SmaI	CCCGGG	1 cut(s)	982
SmiMI	CAYNNNNRTG	4 cut(s)	161, 269, 728, 1019
SmlI	CTYRAG	2 cut(s)	1919, 1934
SmoI	CTYRAG	2 cut(s)	1919, 1934
Sse9I	AATT	8 cut(s)	91, 339, 431, 609, 1075, 1296, 1443, 1781
SsiI	CCGC	3 cut(s)	396, 398, 1288
SstI	GAGCTC	2 cut(s)	309, 771
StyD4I	CCNGG	8 cut(s)	856, 873, 905, 943, 979, 980, 1127, 2014
StyI	CCWWGG	3 cut(s)	84, 1776, 1817
TaaI	ACNGT	6 cut(s)	242, 371, 1060, 1073, 1661, 1872
TaiI	ACGT	1 cut(s)	1644
TaqI	TCGA	4 cut(s)	73, 515, 1653, 1935
TaqII	GACCGA	1 cut(s)	1990
TasI	AATT	8 cut(s)	91, 339, 431, 609, 1075, 1296, 1443, 1781
TauI	GCSGC	1 cut(s)	401
TfiI	GAWTC	7 cut(s)	5, 51, 75, 894, 950, 1390, 1927
Tru1I	TTAA	3 cut(s)	1343, 1701, 1784
Tru9I	TTAA	3 cut(s)	1343, 1701, 1784
TscAI	CASTG	6 cut(s)	229, 1063, 1102, 1264, 1568, 1755
TseFI	GTSAC	4 cut(s)	224, 634, 1336, 1456
TseI	GCWGC	4 cut(s)	1039, 1181, 1730, 1745
Tsp45I	GTSAC	4 cut(s)	224, 634, 1336, 1456
TspGWI	ACGGA	1 cut(s)	27
TspMI	CCCGGG	1 cut(s)	980
TspRI	CASTG	6 cut(s)	229, 1063, 1102, 1264, 1568, 1755
VneI	GTGCAC	1 cut(s)	1895
VpaK11BI	GGWCC	4 cut(s)	278, 1125, 1202, 1973
XapI	RAATTY	1 cut(s)	609
XhoI	CTCGAG	1 cut(s)	1934
XmaI	CCCGGG	1 cut(s)	980
XmiI	GTMKAC	1 cut(s)	1403
XmnI	GAANNNNTTC	1 cut(s)	1860
Zsp2I	ATGCAT	1 cut(s)	2037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.