Rorug01G0252400

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
36104728 .. 36105198
471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0252400.1

Sequence Viewer

Length: 471 bp
ATGGAACTAATTATAAGTAAGCGAGATTTCGAGGGCAAGGATTTTGGTCCCAAATTGTCAAGTTTGGAGATGTTAGCAATGGTTACTGCTGTTGCTGCCAAGAAATTGAATCGAGAAAAGCAACAGAGGATGATGGGTACCTTCAACTCCAAGAAAGAAGAAACTGAGGCATACCAATCAGTGTCGACTAAGCAAGAATTTCGGGTGGCAGAGAAGAGTGCTTTAAATAAGCCTCTGGTAATAGCCTCGAAGAAAGGGAAGCCTACGGTAATAGAGCCTGAAAATACCCTAGGAAGTTATAGTGGGTACCTTCAACTCCAAATGGGTACCTTAAACTCCAAGAAAGAACCAGATTATGTTGTAGAGAAAGAATCTGGTTCATTCATTCCGAATAAGCCACGGGGATGGCAGCCCAAGAAAGAAAACGGTGTTAGAGAACAAAAAGTTATGACTGTTGTAAAACTAACATAG

Protein Analysis

156

Amino Acids

17.57

Weight (kDa)

9.65

Isoelectric Point (pI)

31.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 14
Acc65I GGTACC 3 cut(s) 137, 306, 326
AccB1I GGYRCC 3 cut(s) 137, 306, 326
AccI GTMKAC 1 cut(s) 185
AcsI RAATTY 1 cut(s) 197
AfaI GTAC 3 cut(s) 139, 308, 328
AgsI TTSAA 3 cut(s) 109, 145, 314
ApeKI GCWGC 2 cut(s) 95, 409
ApoI RAATTY 1 cut(s) 197
Asp718I GGTACC 3 cut(s) 137, 306, 326
AspA2I CCTAGG 1 cut(s) 289
AspS9I GGNCC 1 cut(s) 47
AvaII GGWCC 1 cut(s) 47
AvrII CCTAGG 1 cut(s) 289
BanI GGYRCC 3 cut(s) 137, 306, 326
BbvI GCAGC 2 cut(s) 82, 421
BccI CCATC 2 cut(s) 127, 399
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BfaI CTAG 1 cut(s) 290
BisI GCNGC 2 cut(s) 96, 410
BlnI CCTAGG 1 cut(s) 289
BlsI GCNGC 2 cut(s) 97, 411
Bme18I GGWCC 1 cut(s) 47
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 4 cut(s) 49, 139, 308, 328
BsaJI CCNNGG 2 cut(s) 289, 398
Bse3DI GCAATG 1 cut(s) 84
BseDI CCNNGG 2 cut(s) 289, 398
BseGI GGATG 2 cut(s) 135, 410
BseMI GCAATG 1 cut(s) 84
BseMII CTCAG 1 cut(s) 156
BseXI GCAGC 2 cut(s) 82, 421
BshNI GGYRCC 3 cut(s) 137, 306, 326
BslFI GGGAC 1 cut(s) 33
BsmFI GGGAC 1 cut(s) 33
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 4 cut(s) 49, 139, 308, 328
BspT107I GGYRCC 3 cut(s) 137, 306, 326
BsrDI GCAATG 1 cut(s) 84
BssECI CCNNGG 2 cut(s) 289, 398
BssT1I CCWWGG 1 cut(s) 289
Bst4CI ACNGT 3 cut(s) 268, 428, 454
Bst6I CTCTTC 1 cut(s) 209
BstDEI CTNAG 2 cut(s) 165, 189
BstDSI CCRYGG 1 cut(s) 398
BstF5I GGATG 2 cut(s) 135, 410
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstV1I GCAGC 2 cut(s) 82, 421
BstXI CCANNNNNNTGG 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 398
BtsCI GGATG 2 cut(s) 135, 410
BtsIMutI CAGTG 1 cut(s) 186
Cfr13I GGNCC 1 cut(s) 47
Csp6I GTAC 3 cut(s) 138, 307, 327
CviJI RGCY 6 cut(s) 232, 245, 262, 277, 397, 412
CviKI_1 RGCY 6 cut(s) 232, 245, 262, 277, 397, 412
CviQI GTAC 3 cut(s) 138, 307, 327
DdeI CTNAG 2 cut(s) 165, 189
DraI TTTAAA 1 cut(s) 225
Eam1104I CTCTTC 1 cut(s) 209
EarI CTCTTC 1 cut(s) 209
Eco130I CCWWGG 1 cut(s) 289
Eco47I GGWCC 1 cut(s) 47
EcoT14I CCWWGG 1 cut(s) 289
ErhI CCWWGG 1 cut(s) 289
FaiI YATR 6 cut(s) 14, 172, 300, 357, 449, 469
FaqI GGGAC 1 cut(s) 33
FblI GTMKAC 1 cut(s) 185
Fnu4HI GCNGC 2 cut(s) 96, 410
FokI GGATG 2 cut(s) 142, 417
Fsp4HI GCNGC 2 cut(s) 96, 410
FspBI CTAG 1 cut(s) 290
GluI GCNGC 2 cut(s) 96, 410
HincII GTYRAC 1 cut(s) 186
HindII GTYRAC 1 cut(s) 186
HinfI GANTC 2 cut(s) 109, 371
Hpy166II GTNNAC 1 cut(s) 186
Hpy188I TCNGA 1 cut(s) 390
Hpy188III TCNNGA 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 186
HpyAV CCTTC 2 cut(s) 151, 320
HpyCH4III ACNGT 3 cut(s) 268, 428, 454
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpyF3I CTNAG 2 cut(s) 165, 189
KpnI GGTACC 3 cut(s) 141, 310, 330
LpnPI CCDG 4 cut(s) 221, 291, 360, 363
Lsp1109I GCAGC 2 cut(s) 82, 421
MaeI CTAG 1 cut(s) 290
MaeIII GTNAC 1 cut(s) 82
MboII GAAGA 3 cut(s) 170, 226, 262
MluCI AATT 4 cut(s) 9, 53, 104, 197
MnlI CCTC 5 cut(s) 25, 120, 160, 243, 256
MseI TTAA 2 cut(s) 224, 332
MslI CAYNNNNRTG 1 cut(s) 403
MwoI GCNNNNNNNGC 1 cut(s) 95
NlaIV GGNNCC 4 cut(s) 49, 139, 308, 328
PfeI GAWTC 2 cut(s) 109, 371
PkrI GCNGC 2 cut(s) 97, 411
PsiI TTATAA 1 cut(s) 14
PspN4I GGNNCC 4 cut(s) 49, 139, 308, 328
PspPI GGNCC 1 cut(s) 47
RsaI GTAC 3 cut(s) 139, 308, 328
RsaNI GTAC 3 cut(s) 138, 307, 327
RseI CAYNNNNRTG 1 cut(s) 403
SalI GTCGAC 1 cut(s) 184
SaqAI TTAA 2 cut(s) 224, 332
SatI GCNGC 2 cut(s) 96, 410
Sau96I GGNCC 1 cut(s) 47
SetI ASST 3 cut(s) 143, 312, 332
SinI GGWCC 1 cut(s) 47
SmiMI CAYNNNNRTG 1 cut(s) 403
Sse9I AATT 4 cut(s) 9, 53, 104, 197
SspMI CTAG 1 cut(s) 290
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 3 cut(s) 268, 428, 454
TaqI TCGA 4 cut(s) 30, 112, 185, 248
TasI AATT 4 cut(s) 9, 53, 104, 197
TfiI GAWTC 2 cut(s) 109, 371
Tru1I TTAA 2 cut(s) 224, 332
Tru9I TTAA 2 cut(s) 224, 332
TscAI CASTG 1 cut(s) 186
TseI GCWGC 2 cut(s) 95, 409
TspDTI ATGAA 2 cut(s) 369, 373
TspRI CASTG 1 cut(s) 186
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 1 cut(s) 197
XmaJI CCTAGG 1 cut(s) 289
XmiI GTMKAC 1 cut(s) 185
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.