Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Forward (+)

18293110 .. 18296816

Gene Structure 3707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028070

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAAGCAGAAAGGTACGGACAGCGATAAGGCTGTTCTTAGTCTTGGTGGTGTTTGGAGGGTGTGTTTTTCTCTATGTCATGATGCCCACAAACACATATAAGCAGATATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGTTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATGGAAAGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAAGGTCCTCTAGGCATTGTTTCTGGGATAGAGATCACCTTCTTCATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCAAAGAGCCATGAAAAAGTGTGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCTGGAGAGCTAGCTTTGCTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCTCTTCATGGTCTTCTTCGTCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTTCCTGGCTTCTTCCTCTTCCTGGTTGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCTCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCGCCAAGAGTCCCGGGTTGAAATACAATCCAACTAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTACTTCAAACAGTAATTTGGAGCCTGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCAACGCCTTCTACAAGTGATCGGATTGAGGCCGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCGCGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGAACTGATTCCACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCGTTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATAATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATTGAGCACAGTTCCTATAAGATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACAAAGGGGTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGCCTCCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGATTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

718

Amino Acids

80.69

Weight (kDa)

9.55

Isoelectric Point (pI)

39.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	182 - 303	9.3e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	336 - 433	2.4e-23	FAD-binding domain
NAD_binding_6	PF08030	440 - 700	3.3e-20	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1926
Acc36I	ACCTGC	1 cut(s)	1870
AccI	GTMKAC	1 cut(s)	1493
AccII	CGCG	4 cut(s)	488, 1009, 1380, 1400
AciI	CCGC	6 cut(s)	486, 488, 1272, 1378, 1398, 1400
AclWI	GGATC	1 cut(s)	2044
AcsI	RAATTY	1 cut(s)	699
AcuI	CTGAAG	1 cut(s)	1440
AcyI	GRCGYC	1 cut(s)	921
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	4 cut(s)	63, 193, 449, 650
AfiI	CCNNNNNNNGG	4 cut(s)	178, 620, 895, 964
AjnI	CCWGG	4 cut(s)	946, 963, 995, 1217
AjuI	GAANNNNNNNTTGG	2 cut(s)	1401, 1433
Alw21I	GWGCWC	4 cut(s)	684, 861, 1749, 1989
Alw26I	GTCTC	4 cut(s)	928, 1021, 1548, 1968
Alw44I	GTGCAC	1 cut(s)	1985
AlwI	GGATC	1 cut(s)	2044
Ama87I	CYCGRG	3 cut(s)	1023, 1070, 2024
AoxI	GGCC	6 cut(s)	180, 622, 1269, 1283, 1401, 1666
ApaLI	GTGCAC	1 cut(s)	1985
ApeKI	GCWGC	3 cut(s)	1129, 1820, 1835
ApoI	RAATTY	1 cut(s)	699
Asp700I	GAANNNNTTC	1 cut(s)	1479
AspLEI	GCGC	3 cut(s)	846, 1009, 1646
AspS9I	GGNCC	5 cut(s)	368, 1215, 1283, 1292, 2063
AsuC2I	CCSGG	3 cut(s)	1035, 1071, 1072
AsuHPI	GGTGA	8 cut(s)	24, 373, 391, 619, 1049, 1214, 1348, 1711
AsuNHI	GCTAGC	2 cut(s)	638, 790
AvaI	CYCGRG	3 cut(s)	1023, 1070, 2024
AvaII	GGWCC	4 cut(s)	368, 1215, 1292, 2063
BaeGI	GKGCMC	1 cut(s)	1989
BanII	GRGCYC	2 cut(s)	861, 1786
BauI	CACGAG	1 cut(s)	594
BbsI	GAAGAC	1 cut(s)	892
Bbv12I	GWGCWC	4 cut(s)	684, 861, 1749, 1989
BbvI	GCAGC	3 cut(s)	1116, 1807, 1847
BccI	CCATC	3 cut(s)	253, 285, 2144
BceAI	ACGGC	2 cut(s)	334, 1619
BciT130I	CCWGG	4 cut(s)	948, 965, 997, 1219
BcnI	CCSGG	3 cut(s)	1035, 1071, 1072
BcoDI	GTCTC	4 cut(s)	928, 1021, 1548, 1968
BfuAI	ACCTGC	1 cut(s)	1870
BisI	GCNGC	6 cut(s)	489, 1130, 1272, 1401, 1821, 1836
BlsI	GCNGC	6 cut(s)	490, 1131, 1273, 1402, 1822, 1837
Bme1390I	CCNGG	7 cut(s)	948, 965, 997, 1035, 1071, 1072, 1219
Bme18I	GGWCC	4 cut(s)	368, 1215, 1292, 2063
BmeT110I	CYCGRG	3 cut(s)	1023, 1070, 2024
BmgT120I	GGNCC	5 cut(s)	368, 1215, 1283, 1292, 2063
BmiI	GGNNCC	1 cut(s)	1173
BmrFI	CCNGG	7 cut(s)	948, 965, 997, 1035, 1071, 1072, 1219
BmsI	GCATC	7 cut(s)	120, 150, 542, 651, 1147, 1288, 1688
BmtI	GCTAGC	2 cut(s)	642, 794
BpiI	GAAGAC	1 cut(s)	892
BpmI	CTGGAG	2 cut(s)	804, 1508
BpuEI	CTTGAG	1 cut(s)	1994
BpuMI	CCSGG	3 cut(s)	1035, 1071, 1072
BsaAI	YACGTR	1 cut(s)	447
BsaBI	GATNNNNATC	2 cut(s)	395, 1712
BsaHI	GRCGYC	1 cut(s)	921
BsaI	GGTCTC	1 cut(s)	1021
BsaJI	CCNNGG	5 cut(s)	177, 486, 1070, 1398, 1866
BsaWI	WCCGGW	1 cut(s)	586
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	4 cut(s)	178, 620, 895, 964
Bse1I	ACTGG	2 cut(s)	769, 1658
Bse3DI	GCAATG	3 cut(s)	233, 249, 1139
Bse8I	GATNNNNATC	2 cut(s)	395, 1712
BseBI	CCWGG	4 cut(s)	948, 965, 997, 1219
BseDI	CCNNGG	5 cut(s)	177, 486, 1070, 1398, 1866
BseGI	GGATG	4 cut(s)	165, 825, 885, 1138
BseJI	GATNNNNATC	2 cut(s)	395, 1712
BseLI	CCNNNNNNNGG	4 cut(s)	178, 620, 895, 964
BseMI	GCAATG	3 cut(s)	233, 249, 1139
BseMII	CTCAG	3 cut(s)	624, 1167, 1600
BseNI	ACTGG	2 cut(s)	769, 1658
BseSI	GKGCMC	1 cut(s)	1989
BseXI	GCAGC	3 cut(s)	1116, 1807, 1847
BsgI	GTGCAG	1 cut(s)	1854
Bsh1236I	CGCG	4 cut(s)	488, 1009, 1380, 1400
BshFI	GGCC	6 cut(s)	182, 624, 1271, 1285, 1403, 1668
BsiHKAI	GWGCWC	4 cut(s)	684, 861, 1749, 1989
BsiHKCI	CYCGRG	3 cut(s)	1023, 1070, 2024
BsiSI	CCGG	3 cut(s)	587, 1034, 1071
BslFI	GGGAC	2 cut(s)	25, 1053
BslI	CCNNNNNNNGG	4 cut(s)	178, 620, 895, 964
BsmAI	GTCTC	4 cut(s)	928, 1021, 1548, 1968
BsmBI	CGTCTC	1 cut(s)	928
BsmFI	GGGAC	2 cut(s)	25, 1053
BsmI	GAATGC	1 cut(s)	1442
BsnI	GGCC	6 cut(s)	182, 624, 1271, 1285, 1403, 1668
Bso31I	GGTCTC	1 cut(s)	1021
BsoBI	CYCGRG	3 cut(s)	1023, 1070, 2024
Bsp1286I	GDGCHC	5 cut(s)	684, 861, 1749, 1786, 1989
Bsp143I	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
BspACI	CCGC	6 cut(s)	486, 488, 1272, 1378, 1398, 1400
BspANI	GGCC	6 cut(s)	182, 624, 1271, 1285, 1403, 1668
BspCNI	CTCAG	3 cut(s)	625, 1168, 1599
BspFNI	CGCG	4 cut(s)	488, 1009, 1380, 1400
BspHI	TCATGA	2 cut(s)	126, 1689
BspLI	GGNNCC	1 cut(s)	1173
BspMI	ACCTGC	1 cut(s)	1870
BspOI	GCTAGC	2 cut(s)	642, 794
BspPI	GGATC	1 cut(s)	2044
BspQI	GCTCTTC	3 cut(s)	689, 866, 997
BspTNI	GGTCTC	1 cut(s)	1021
BsrDI	GCAATG	3 cut(s)	233, 249, 1139
BsrI	ACTGG	2 cut(s)	769, 1658
BssECI	CCNNGG	5 cut(s)	177, 486, 1070, 1398, 1866
BssMI	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
BssNI	GRCGYC	1 cut(s)	921
BssSI	CACGAG	1 cut(s)	594
BssT1I	CCWWGG	2 cut(s)	177, 1866
Bst2BI	CACGAG	1 cut(s)	594
Bst2UI	CCWGG	4 cut(s)	948, 965, 997, 1219
Bst4CI	ACNGT	6 cut(s)	332, 461, 1150, 1163, 1751, 1962
Bst6I	CTCTTC	7 cut(s)	584, 689, 866, 896, 965, 997, 1459
BstACI	GRCGYC	1 cut(s)	921
BstBAI	YACGTR	1 cut(s)	447
BstC8I	GCNNGC	5 cut(s)	640, 792, 934, 1382, 1415
BstDEI	CTNAG	5 cut(s)	85, 633, 1176, 1313, 1586
BstDSI	CCRYGG	2 cut(s)	486, 1398
BstF5I	GGATG	4 cut(s)	165, 825, 885, 1138
BstFNI	CGCG	4 cut(s)	488, 1009, 1380, 1400
BstHHI	GCGC	3 cut(s)	846, 1009, 1646
BstKTI	GATC	6 cut(s)	399, 733, 973, 1185, 1261, 2039
BstMAI	GTCTC	4 cut(s)	928, 1021, 1548, 1968
BstMBI	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
BstMWI	GCNNNNNNNGC	6 cut(s)	796, 843, 1135, 1826, 1835, 1885
BstNI	CCWGG	4 cut(s)	948, 965, 997, 1219
BstSCI	CCNGG	7 cut(s)	946, 963, 995, 1033, 1069, 1070, 1217
BstSLI	GKGCMC	1 cut(s)	1989
BstUI	CGCG	4 cut(s)	488, 1009, 1380, 1400
BstV1I	GCAGC	3 cut(s)	1116, 1807, 1847
BstV2I	GAAGAC	1 cut(s)	892
BsuRI	GGCC	6 cut(s)	182, 624, 1271, 1285, 1403, 1668
BtgI	CCRYGG	2 cut(s)	486, 1398
BtsCI	GGATG	4 cut(s)	165, 825, 885, 1138
BtsI	GCAGTG	2 cut(s)	1354, 1845
BtsIMutI	CAGTG	5 cut(s)	1146, 1192, 1354, 1651, 1845
BveI	ACCTGC	1 cut(s)	1870
Cac8I	GCNNGC	5 cut(s)	640, 792, 934, 1382, 1415
CciI	TCATGA	2 cut(s)	126, 1689
CfoI	GCGC	3 cut(s)	846, 1009, 1646
Cfr13I	GGNCC	5 cut(s)	368, 1215, 1283, 1292, 2063
Cfr42I	CCGCGG	2 cut(s)	489, 1401
Cfr9I	CCCGGG	1 cut(s)	1070
CseI	GACGC	2 cut(s)	910, 1084
Csp6I	GTAC	4 cut(s)	62, 192, 448, 649
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 448, 649
DdeI	CTNAG	5 cut(s)	85, 633, 1176, 1313, 1586
DpnI	GATC	6 cut(s)	398, 732, 972, 1184, 1260, 2038
DpnII	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
DraIII	CACNNNGTG	1 cut(s)	212
Eam1104I	CTCTTC	7 cut(s)	584, 689, 866, 896, 965, 997, 1459
EarI	CTCTTC	7 cut(s)	584, 689, 866, 896, 965, 997, 1459
Ecl136II	GAGCTC	1 cut(s)	859
Eco130I	CCWWGG	2 cut(s)	177, 1866
Eco24I	GRGCYC	2 cut(s)	861, 1786
Eco31I	GGTCTC	1 cut(s)	1021
Eco47I	GGWCC	4 cut(s)	368, 1215, 1292, 2063
Eco53kI	GAGCTC	1 cut(s)	859
Eco57I	CTGAAG	1 cut(s)	1440
Eco88I	CYCGRG	3 cut(s)	1023, 1070, 2024
EcoICRI	GAGCTC	1 cut(s)	859
EcoO109I	RGGNCCY	2 cut(s)	368, 1283
EcoRII	CCWGG	4 cut(s)	946, 963, 995, 1217
EcoT14I	CCWWGG	2 cut(s)	177, 1866
EcoT22I	ATGCAT	1 cut(s)	2127
EcoT38I	GRGCYC	2 cut(s)	861, 1786
ErhI	CCWWGG	2 cut(s)	177, 1866
Esp3I	CGTCTC	1 cut(s)	928
FaqI	GGGAC	2 cut(s)	25, 1053
FauNDI	CATATG	4 cut(s)	563, 1507, 1543, 1595
FblI	GTMKAC	1 cut(s)	1493
Fnu4HI	GCNGC	6 cut(s)	489, 1130, 1272, 1401, 1821, 1836
FokI	GGATG	4 cut(s)	172, 832, 872, 1125
FriOI	GRGCYC	2 cut(s)	861, 1786
Fsp4HI	GCNGC	6 cut(s)	489, 1130, 1272, 1401, 1821, 1836
GlaI	GCGC	3 cut(s)	845, 1008, 1645
GluI	GCNGC	6 cut(s)	489, 1130, 1272, 1401, 1821, 1836
GsuI	CTGGAG	2 cut(s)	804, 1508
HaeIII	GGCC	6 cut(s)	182, 624, 1271, 1285, 1403, 1668
HapII	CCGG	3 cut(s)	587, 1034, 1071
HgaI	GACGC	2 cut(s)	910, 1084
HhaI	GCGC	3 cut(s)	846, 1009, 1646
Hin1I	GRCGYC	1 cut(s)	921
Hin6I	GCGC	3 cut(s)	844, 1007, 1644
HinP1I	GCGC	3 cut(s)	844, 1007, 1644
HindIII	AAGCTT	2 cut(s)	1223, 1415
HinfI	GANTC	9 cut(s)	5, 168, 984, 1026, 1040, 1066, 1480, 2017, 2132
HpaII	CCGG	3 cut(s)	587, 1034, 1071
HphI	GGTGA	8 cut(s)	24, 373, 391, 619, 1049, 1214, 1348, 1711
Hpy166II	GTNNAC	4 cut(s)	206, 1494, 1987, 2063
Hpy188III	TCNNGA	7 cut(s)	127, 804, 1525, 1690, 1705, 2011, 2106
Hpy8I	GTNNAC	4 cut(s)	206, 1494, 1987, 2063
Hpy99I	CGWCG	1 cut(s)	607
HpyAV	CCTTC	8 cut(s)	41, 412, 1199, 1257, 1274, 1414, 1561, 1696
HpyCH4III	ACNGT	6 cut(s)	332, 461, 1150, 1163, 1751, 1962
HpyCH4IV	ACGT	2 cut(s)	446, 1731
HpyF10VI	GCNNNNNNNGC	6 cut(s)	796, 843, 1135, 1826, 1835, 1885
HpyF3I	CTNAG	5 cut(s)	85, 633, 1176, 1313, 1586
HpySE526I	ACGT	2 cut(s)	446, 1731
Hsp92I	GRCGYC	1 cut(s)	921
HspAI	GCGC	3 cut(s)	844, 1007, 1644
KspI	CCGCGG	2 cut(s)	489, 1401
Kzo9I	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
LguI	GCTCTTC	3 cut(s)	689, 866, 997
LmnI	GCTCC	1 cut(s)	1171
Lsp1109I	GCAGC	3 cut(s)	1116, 1807, 1847
LweI	GCATC	7 cut(s)	120, 150, 542, 651, 1147, 1288, 1688
MaeII	ACGT	2 cut(s)	446, 1731
MaeIII	GTNAC	8 cut(s)	314, 557, 704, 724, 974, 1150, 1426, 1546
MalI	GATC	6 cut(s)	398, 732, 972, 1184, 1260, 2038
MboI	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
MhlI	GDGCHC	5 cut(s)	684, 861, 1749, 1786, 1989
MluCI	AATT	7 cut(s)	184, 429, 521, 699, 1165, 1386, 1533
MlyI	GAGTC	3 cut(s)	1035, 1075, 2141
MmeI	TCCRAC	3 cut(s)	1112, 1193, 1923
Mph1103I	ATGCAT	1 cut(s)	2127
MroXI	GAANNNNTTC	1 cut(s)	1479
MseI	TTAA	3 cut(s)	1433, 1791, 1874
MslI	CAYNNNNRTG	4 cut(s)	254, 359, 818, 1109
MspA1I	CMGCKG	2 cut(s)	488, 1400
MspI	CCGG	3 cut(s)	587, 1034, 1071
MspR9I	CCNGG	7 cut(s)	948, 965, 997, 1035, 1071, 1072, 1219
Mva1269I	GAATGC	1 cut(s)	1442
MvaI	CCWGG	4 cut(s)	948, 965, 997, 1219
MvnI	CGCG	4 cut(s)	488, 1009, 1380, 1400
MwoI	GCNNNNNNNGC	6 cut(s)	796, 843, 1135, 1826, 1835, 1885
NciI	CCSGG	3 cut(s)	1035, 1071, 1072
NdeI	CATATG	4 cut(s)	563, 1507, 1543, 1595
NdeII	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
NheI	GCTAGC	2 cut(s)	638, 790
NlaIV	GGNNCC	1 cut(s)	1173
NmuCI	GTSAC	4 cut(s)	314, 724, 1426, 1546
NsiI	ATGCAT	1 cut(s)	2127
PaeR7I	CTCGAG	2 cut(s)	1023, 2024
PagI	TCATGA	2 cut(s)	126, 1689
PciSI	GCTCTTC	3 cut(s)	689, 866, 997
PcsI	WCGNNNNNNNCGW	1 cut(s)	979
PctI	GAATGC	1 cut(s)	1442
PdmI	GAANNNNTTC	1 cut(s)	1479
PfeI	GAWTC	6 cut(s)	5, 168, 984, 1040, 1480, 2017
PfoI	TCCNGGA	1 cut(s)	995
PkrI	GCNGC	6 cut(s)	490, 1131, 1273, 1402, 1822, 1837
PleI	GAGTC	3 cut(s)	1034, 1074, 2140
PpsI	GAGTC	3 cut(s)	1034, 1074, 2140
Ppu21I	YACGTR	1 cut(s)	447
PpuMI	RGGWCCY	1 cut(s)	368
PsiI	TTATAA	2 cut(s)	303, 1926
Psp124BI	GAGCTC	1 cut(s)	861
Psp5II	RGGWCCY	1 cut(s)	368
Psp6I	CCWGG	4 cut(s)	946, 963, 995, 1217
PspGI	CCWGG	4 cut(s)	946, 963, 995, 1217
PspN4I	GGNNCC	1 cut(s)	1173
PspPI	GGNCC	5 cut(s)	368, 1215, 1283, 1292, 2063
PspPPI	RGGWCCY	1 cut(s)	368
PspXI	VCTCGAGB	2 cut(s)	1023, 2024
RsaI	GTAC	4 cut(s)	63, 193, 449, 650
RsaNI	GTAC	4 cut(s)	62, 192, 448, 649
RseI	CAYNNNNRTG	4 cut(s)	254, 359, 818, 1109
SacI	GAGCTC	1 cut(s)	861
SacII	CCGCGG	2 cut(s)	489, 1401
SapI	GCTCTTC	3 cut(s)	689, 866, 997
SaqAI	TTAA	3 cut(s)	1433, 1791, 1874
SatI	GCNGC	6 cut(s)	489, 1130, 1272, 1401, 1821, 1836
Sau3AI	GATC	6 cut(s)	396, 730, 970, 1182, 1258, 2036
Sau96I	GGNCC	5 cut(s)	368, 1215, 1283, 1292, 2063
SchI	GAGTC	3 cut(s)	1035, 1075, 2141
ScrFI	CCNGG	7 cut(s)	948, 965, 997, 1035, 1071, 1072, 1219
SduI	GDGCHC	5 cut(s)	684, 861, 1749, 1786, 1989
SfaNI	GCATC	7 cut(s)	120, 150, 542, 651, 1147, 1288, 1688
Sfr274I	CTCGAG	2 cut(s)	1023, 2024
Sfr303I	CCGCGG	2 cut(s)	489, 1401
SgrBI	CCGCGG	2 cut(s)	489, 1401
SinI	GGWCC	4 cut(s)	368, 1215, 1292, 2063
SlaI	CTCGAG	2 cut(s)	1023, 2024
SmaI	CCCGGG	1 cut(s)	1072
SmiMI	CAYNNNNRTG	4 cut(s)	254, 359, 818, 1109
SmlI	CTYRAG	3 cut(s)	1023, 2009, 2024
SmoI	CTYRAG	3 cut(s)	1023, 2009, 2024
Sse9I	AATT	7 cut(s)	184, 429, 521, 699, 1165, 1386, 1533
SsiI	CCGC	6 cut(s)	486, 488, 1272, 1378, 1398, 1400
SstI	GAGCTC	1 cut(s)	861
StyD4I	CCNGG	7 cut(s)	946, 963, 995, 1033, 1069, 1070, 1217
StyI	CCWWGG	2 cut(s)	177, 1866
TaaI	ACNGT	6 cut(s)	332, 461, 1150, 1163, 1751, 1962
TaiI	ACGT	2 cut(s)	449, 1734
TaqI	TCGA	4 cut(s)	166, 605, 1024, 2025
TaqII	GACCGA	1 cut(s)	2080
TasI	AATT	7 cut(s)	184, 429, 521, 699, 1165, 1386, 1533
TauI	GCSGC	3 cut(s)	491, 1274, 1403
TfiI	GAWTC	6 cut(s)	5, 168, 984, 1040, 1480, 2017
Tru1I	TTAA	3 cut(s)	1433, 1791, 1874
Tru9I	TTAA	3 cut(s)	1433, 1791, 1874
TscAI	CASTG	5 cut(s)	1153, 1192, 1354, 1658, 1845
TseFI	GTSAC	4 cut(s)	314, 724, 1426, 1546
TseI	GCWGC	3 cut(s)	1129, 1820, 1835
Tsp45I	GTSAC	4 cut(s)	314, 724, 1426, 1546
TspGWI	ACGGA	2 cut(s)	27, 79
TspMI	CCCGGG	1 cut(s)	1070
TspRI	CASTG	5 cut(s)	1153, 1192, 1354, 1658, 1845
VneI	GTGCAC	1 cut(s)	1985
VpaK11BI	GGWCC	4 cut(s)	368, 1215, 1292, 2063
XapI	RAATTY	1 cut(s)	699
XhoI	CTCGAG	2 cut(s)	1023, 2024
XmaI	CCCGGG	1 cut(s)	1070
XmiI	GTMKAC	1 cut(s)	1493
XmnI	GAANNNNTTC	1 cut(s)	1479
Zsp2I	ATGCAT	1 cut(s)	2127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.