Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49319547 .. 49323290

Gene Structure 3744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58225

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACGGACAGCGATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGCTCTATGTCATGATGCCCACAAACACATATAAGCAGATATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAGGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTAATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCGAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTCTTTGGCCTCAACTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCTAACATAGCTGGAGAGATAGCTTTACTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTATACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTCGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTTCTTCAAACAGTAATTTGGAGTCAGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGCGCAAACCATTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATCGAGCACAGTTCCTATAAAATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCGGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCGAAGGAGTTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCGAGGGGTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCTAGCGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

700

Amino Acids

78.66

Weight (kDa)

9.59

Isoelectric Point (pI)

41.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	165 - 285	4.3e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	319 - 416	1.1e-22	FAD-binding domain
NAD_binding_6	PF08030	423 - 683	4.1e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1875
Acc36I	ACCTGC	1 cut(s)	1819
AccI	GTMKAC	1 cut(s)	1442
AccII	CGCG	3 cut(s)	437, 958, 1329
AciI	CCGC	4 cut(s)	435, 437, 1327, 1769
AclWI	GGATC	1 cut(s)	1993
AcsI	RAATTY	2 cut(s)	648, 1710
AcuI	CTGAAG	1 cut(s)	1389
AcyI	GRCGYC	1 cut(s)	870
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	4 cut(s)	63, 193, 398, 599
AfiI	CCNNNNNNNGG	4 cut(s)	178, 569, 844, 913
AgsI	TTSAA	8 cut(s)	9, 189, 1027, 1107, 1229, 1396, 1552, 1981
AjnI	CCWGG	4 cut(s)	895, 912, 944, 1166
AjuI	GAANNNNNNNTTGG	2 cut(s)	1350, 1382
Alw21I	GWGCWC	5 cut(s)	348, 633, 810, 1698, 1938
Alw26I	GTCTC	4 cut(s)	877, 970, 1497, 1917
Alw44I	GTGCAC	1 cut(s)	1934
AlwI	GGATC	1 cut(s)	1993
Ama87I	CYCGRG	3 cut(s)	972, 1019, 1973
AoxI	GGCC	5 cut(s)	180, 571, 1232, 1350, 1615
ApaLI	GTGCAC	1 cut(s)	1934
ApeKI	GCWGC	3 cut(s)	1078, 1220, 1784
ApoI	RAATTY	2 cut(s)	648, 1710
Asp700I	GAANNNNTTC	1 cut(s)	1899
AspLEI	GCGC	3 cut(s)	795, 958, 1595
AspS9I	GGNCC	5 cut(s)	317, 1164, 1232, 1241, 2012
AsuC2I	CCSGG	3 cut(s)	984, 1020, 1021
AsuNHI	GCTAGC	1 cut(s)	587
AvaI	CYCGRG	3 cut(s)	972, 1019, 1973
AvaII	GGWCC	4 cut(s)	317, 1164, 1241, 2012
BaeGI	GKGCMC	1 cut(s)	1938
BanII	GRGCYC	3 cut(s)	348, 810, 1735
BauI	CACGAG	1 cut(s)	543
BbsI	GAAGAC	1 cut(s)	841
Bbv12I	GWGCWC	5 cut(s)	348, 633, 810, 1698, 1938
BbvI	GCAGC	3 cut(s)	1065, 1207, 1796
BccI	CCATC	2 cut(s)	253, 2093
BceAI	ACGGC	2 cut(s)	283, 1365
BciT130I	CCWGG	4 cut(s)	897, 914, 946, 1168
BcnI	CCSGG	3 cut(s)	984, 1020, 1021
BcoDI	GTCTC	4 cut(s)	877, 970, 1497, 1917
BfmI	CTRYAG	1 cut(s)	1221
BfuAI	ACCTGC	1 cut(s)	1819
BisI	GCNGC	5 cut(s)	438, 1079, 1221, 1770, 1785
BlsI	GCNGC	5 cut(s)	439, 1080, 1222, 1771, 1786
Bme1390I	CCNGG	7 cut(s)	897, 914, 946, 984, 1020, 1021, 1168
Bme18I	GGWCC	4 cut(s)	317, 1164, 1241, 2012
BmeT110I	CYCGRG	3 cut(s)	972, 1019, 1973
BmgT120I	GGNCC	5 cut(s)	317, 1164, 1232, 1241, 2012
BmiI	GGNNCC	1 cut(s)	318
BmrFI	CCNGG	7 cut(s)	897, 914, 946, 984, 1020, 1021, 1168
BmsI	GCATC	7 cut(s)	120, 150, 491, 600, 1096, 1237, 1637
BmtI	GCTAGC	1 cut(s)	591
BpiI	GAAGAC	1 cut(s)	841
BpmI	CTGGAG	2 cut(s)	753, 1457
BpuEI	CTTGAG	1 cut(s)	1943
BpuMI	CCSGG	3 cut(s)	984, 1020, 1021
BsaAI	YACGTR	1 cut(s)	396
BsaBI	GATNNNNATC	1 cut(s)	1661
BsaHI	GRCGYC	1 cut(s)	870
BsaI	GGTCTC	1 cut(s)	970
BsaJI	CCNNGG	6 cut(s)	177, 435, 895, 1019, 1347, 1856
BsaWI	WCCGGW	1 cut(s)	535
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	4 cut(s)	178, 569, 844, 913
Bse1I	ACTGG	1 cut(s)	718
Bse3DI	GCAATG	3 cut(s)	233, 249, 1088
Bse8I	GATNNNNATC	1 cut(s)	1661
BseBI	CCWGG	4 cut(s)	897, 914, 946, 1168
BseDI	CCNNGG	6 cut(s)	177, 435, 895, 1019, 1347, 1856
BseGI	GGATG	4 cut(s)	165, 774, 834, 1087
BseJI	GATNNNNATC	1 cut(s)	1661
BseLI	CCNNNNNNNGG	4 cut(s)	178, 569, 844, 913
BseMI	GCAATG	3 cut(s)	233, 249, 1088
BseMII	CTCAG	2 cut(s)	573, 1549
BseNI	ACTGG	1 cut(s)	718
BseSI	GKGCMC	1 cut(s)	1938
BseXI	GCAGC	3 cut(s)	1065, 1207, 1796
BsgI	GTGCAG	1 cut(s)	1803
Bsh1236I	CGCG	3 cut(s)	437, 958, 1329
Bsh1285I	CGRYCG	2 cut(s)	922, 1692
BshFI	GGCC	5 cut(s)	182, 573, 1234, 1352, 1617
BsiEI	CGRYCG	2 cut(s)	922, 1692
BsiHKAI	GWGCWC	5 cut(s)	348, 633, 810, 1698, 1938
BsiHKCI	CYCGRG	3 cut(s)	972, 1019, 1973
BsiSI	CCGG	3 cut(s)	536, 983, 1020
BslFI	GGGAC	2 cut(s)	25, 1002
BslI	CCNNNNNNNGG	4 cut(s)	178, 569, 844, 913
BsmAI	GTCTC	4 cut(s)	877, 970, 1497, 1917
BsmBI	CGTCTC	1 cut(s)	877
BsmFI	GGGAC	2 cut(s)	25, 1002
BsmI	GAATGC	1 cut(s)	1391
BsnI	GGCC	5 cut(s)	182, 573, 1234, 1352, 1617
Bso31I	GGTCTC	1 cut(s)	970
BsoBI	CYCGRG	3 cut(s)	972, 1019, 1973
Bsp1286I	GDGCHC	6 cut(s)	348, 633, 810, 1698, 1735, 1938
Bsp143I	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
BspACI	CCGC	4 cut(s)	435, 437, 1327, 1769
BspANI	GGCC	5 cut(s)	182, 573, 1234, 1352, 1617
BspCNI	CTCAG	2 cut(s)	574, 1548
BspFNI	CGCG	3 cut(s)	437, 958, 1329
BspHI	TCATGA	2 cut(s)	126, 1638
BspLI	GGNNCC	1 cut(s)	318
BspMAI	CTGCAG	1 cut(s)	1225
BspMI	ACCTGC	1 cut(s)	1819
BspOI	GCTAGC	1 cut(s)	591
BspPI	GGATC	1 cut(s)	1993
BspQI	GCTCTTC	4 cut(s)	437, 638, 815, 946
BspTNI	GGTCTC	1 cut(s)	970
BsrDI	GCAATG	3 cut(s)	233, 249, 1088
BsrI	ACTGG	1 cut(s)	718
BssECI	CCNNGG	6 cut(s)	177, 435, 895, 1019, 1347, 1856
BssMI	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
BssNI	GRCGYC	1 cut(s)	870
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	1 cut(s)	177
Bst2BI	CACGAG	1 cut(s)	543
Bst2UI	CCWGG	4 cut(s)	897, 914, 946, 1168
Bst4CI	ACNGT	6 cut(s)	281, 410, 1099, 1112, 1700, 1911
Bst6I	CTCTTC	8 cut(s)	437, 533, 638, 815, 845, 914, 946, 1408
BstACI	GRCGYC	1 cut(s)	870
BstBAI	YACGTR	1 cut(s)	396
BstC8I	GCNNGC	4 cut(s)	589, 883, 1331, 1364
BstDEI	CTNAG	4 cut(s)	85, 582, 1262, 1535
BstDSI	CCRYGG	2 cut(s)	435, 1347
BstF5I	GGATG	4 cut(s)	165, 774, 834, 1087
BstFNI	CGCG	3 cut(s)	437, 958, 1329
BstHHI	GCGC	3 cut(s)	795, 958, 1595
BstKTI	GATC	6 cut(s)	682, 922, 1134, 1210, 1692, 1988
BstMAI	GTCTC	4 cut(s)	877, 970, 1497, 1917
BstMBI	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
BstMCI	CGRYCG	2 cut(s)	922, 1692
BstMWI	GCNNNNNNNGC	5 cut(s)	792, 1084, 1775, 1784, 1834
BstNI	CCWGG	4 cut(s)	897, 914, 946, 1168
BstSCI	CCNGG	7 cut(s)	895, 912, 944, 982, 1018, 1019, 1166
BstSFI	CTRYAG	1 cut(s)	1221
BstSLI	GKGCMC	1 cut(s)	1938
BstUI	CGCG	3 cut(s)	437, 958, 1329
BstV1I	GCAGC	3 cut(s)	1065, 1207, 1796
BstV2I	GAAGAC	1 cut(s)	841
BstX2I	RGATCY	1 cut(s)	1985
BstYI	RGATCY	1 cut(s)	1985
BsuRI	GGCC	5 cut(s)	182, 573, 1234, 1352, 1617
BtgI	CCRYGG	2 cut(s)	435, 1347
BtgZI	GCGATG	1 cut(s)	1176
BtsCI	GGATG	4 cut(s)	165, 774, 834, 1087
BtsI	GCAGTG	2 cut(s)	1303, 1794
BtsIMutI	CAGTG	4 cut(s)	1095, 1141, 1303, 1794
BveI	ACCTGC	1 cut(s)	1819
Cac8I	GCNNGC	4 cut(s)	589, 883, 1331, 1364
CciI	TCATGA	2 cut(s)	126, 1638
CfoI	GCGC	3 cut(s)	795, 958, 1595
Cfr13I	GGNCC	5 cut(s)	317, 1164, 1232, 1241, 2012
Cfr42I	CCGCGG	1 cut(s)	438
Cfr9I	CCCGGG	1 cut(s)	1019
CseI	GACGC	2 cut(s)	859, 1033
Csp6I	GTAC	4 cut(s)	62, 192, 397, 598
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 397, 598
DdeI	CTNAG	4 cut(s)	85, 582, 1262, 1535
DpnI	GATC	6 cut(s)	681, 921, 1133, 1209, 1691, 1987
DpnII	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
DraIII	CACNNNGTG	1 cut(s)	212
Eam1104I	CTCTTC	8 cut(s)	437, 533, 638, 815, 845, 914, 946, 1408
EarI	CTCTTC	8 cut(s)	437, 533, 638, 815, 845, 914, 946, 1408
Ecl136II	GAGCTC	2 cut(s)	346, 808
Eco130I	CCWWGG	1 cut(s)	177
Eco24I	GRGCYC	3 cut(s)	348, 810, 1735
Eco31I	GGTCTC	1 cut(s)	970
Eco47I	GGWCC	4 cut(s)	317, 1164, 1241, 2012
Eco53kI	GAGCTC	2 cut(s)	346, 808
Eco57I	CTGAAG	1 cut(s)	1389
Eco88I	CYCGRG	3 cut(s)	972, 1019, 1973
EcoICRI	GAGCTC	2 cut(s)	346, 808
EcoO109I	RGGNCCY	2 cut(s)	317, 1232
EcoRII	CCWGG	4 cut(s)	895, 912, 944, 1166
EcoT14I	CCWWGG	1 cut(s)	177
EcoT22I	ATGCAT	1 cut(s)	2076
EcoT38I	GRGCYC	3 cut(s)	348, 810, 1735
ErhI	CCWWGG	1 cut(s)	177
Esp3I	CGTCTC	1 cut(s)	877
FaqI	GGGAC	2 cut(s)	25, 1002
FauNDI	CATATG	4 cut(s)	512, 1456, 1492, 1544
FblI	GTMKAC	1 cut(s)	1442
Fnu4HI	GCNGC	5 cut(s)	438, 1079, 1221, 1770, 1785
FokI	GGATG	4 cut(s)	172, 781, 821, 1074
FriOI	GRGCYC	3 cut(s)	348, 810, 1735
Fsp4HI	GCNGC	5 cut(s)	438, 1079, 1221, 1770, 1785
GlaI	GCGC	3 cut(s)	794, 957, 1594
GluI	GCNGC	5 cut(s)	438, 1079, 1221, 1770, 1785
GsuI	CTGGAG	2 cut(s)	753, 1457
HaeIII	GGCC	5 cut(s)	182, 573, 1234, 1352, 1617
HapII	CCGG	3 cut(s)	536, 983, 1020
HgaI	GACGC	2 cut(s)	859, 1033
HhaI	GCGC	3 cut(s)	795, 958, 1595
Hin1I	GRCGYC	1 cut(s)	870
Hin6I	GCGC	3 cut(s)	793, 956, 1593
HinP1I	GCGC	3 cut(s)	793, 956, 1593
HindIII	AAGCTT	2 cut(s)	1172, 1364
HpaII	CCGG	3 cut(s)	536, 983, 1020
Hpy166II	GTNNAC	5 cut(s)	206, 1347, 1443, 1936, 2012
Hpy188III	TCNNGA	6 cut(s)	127, 753, 1474, 1639, 1654, 1960
Hpy8I	GTNNAC	5 cut(s)	206, 1347, 1443, 1936, 2012
Hpy99I	CGWCG	1 cut(s)	556
HpyCH4III	ACNGT	6 cut(s)	281, 410, 1099, 1112, 1700, 1911
HpyCH4IV	ACGT	2 cut(s)	395, 1680
HpyF10VI	GCNNNNNNNGC	5 cut(s)	792, 1084, 1775, 1784, 1834
HpyF3I	CTNAG	4 cut(s)	85, 582, 1262, 1535
HpySE526I	ACGT	2 cut(s)	395, 1680
Hsp92I	GRCGYC	1 cut(s)	870
HspAI	GCGC	3 cut(s)	793, 956, 1593
KspI	CCGCGG	1 cut(s)	438
Kzo9I	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
LguI	GCTCTTC	4 cut(s)	437, 638, 815, 946
LmnI	GCTCC	1 cut(s)	897
Lsp1109I	GCAGC	3 cut(s)	1065, 1207, 1796
LweI	GCATC	7 cut(s)	120, 150, 491, 600, 1096, 1237, 1637
MaeII	ACGT	2 cut(s)	395, 1680
MaeIII	GTNAC	7 cut(s)	263, 506, 653, 673, 923, 1375, 1495
MalI	GATC	6 cut(s)	681, 921, 1133, 1209, 1691, 1987
MboI	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
MflI	RGATCY	1 cut(s)	1985
MhlI	GDGCHC	6 cut(s)	348, 633, 810, 1698, 1735, 1938
MluCI	AATT	8 cut(s)	184, 378, 470, 648, 1114, 1335, 1482, 1710
MlyI	GAGTC	4 cut(s)	984, 1024, 1130, 2090
MmeI	TCCRAC	3 cut(s)	1061, 1142, 1872
Mph1103I	ATGCAT	1 cut(s)	2076
MroXI	GAANNNNTTC	1 cut(s)	1899
MseI	TTAA	4 cut(s)	356, 1382, 1740, 1823
MslI	CAYNNNNRTG	4 cut(s)	254, 308, 767, 1058
MspA1I	CMGCKG	1 cut(s)	437
MspI	CCGG	3 cut(s)	536, 983, 1020
MspR9I	CCNGG	7 cut(s)	897, 914, 946, 984, 1020, 1021, 1168
Mva1269I	GAATGC	1 cut(s)	1391
MvaI	CCWGG	4 cut(s)	897, 914, 946, 1168
MvnI	CGCG	3 cut(s)	437, 958, 1329
MwoI	GCNNNNNNNGC	5 cut(s)	792, 1084, 1775, 1784, 1834
NciI	CCSGG	3 cut(s)	984, 1020, 1021
NdeI	CATATG	4 cut(s)	512, 1456, 1492, 1544
NdeII	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
NheI	GCTAGC	1 cut(s)	587
NlaIV	GGNNCC	1 cut(s)	318
NmuCI	GTSAC	4 cut(s)	263, 673, 1375, 1495
NsiI	ATGCAT	1 cut(s)	2076
PaeR7I	CTCGAG	1 cut(s)	1973
PagI	TCATGA	2 cut(s)	126, 1638
PciSI	GCTCTTC	4 cut(s)	437, 638, 815, 946
PcsI	WCGNNNNNNNCGW	1 cut(s)	928
PctI	GAATGC	1 cut(s)	1391
PdmI	GAANNNNTTC	1 cut(s)	1899
PfeI	GAWTC	7 cut(s)	5, 51, 168, 933, 989, 1429, 1966
PfoI	TCCNGGA	1 cut(s)	944
PkrI	GCNGC	5 cut(s)	439, 1080, 1222, 1771, 1786
Ple19I	CGATCG	2 cut(s)	922, 1692
PleI	GAGTC	4 cut(s)	983, 1023, 1129, 2089
PpsI	GAGTC	4 cut(s)	983, 1023, 1129, 2089
Ppu21I	YACGTR	1 cut(s)	396
PpuMI	RGGWCCY	1 cut(s)	317
PsiI	TTATAA	1 cut(s)	1875
Psp124BI	GAGCTC	2 cut(s)	348, 810
Psp5II	RGGWCCY	1 cut(s)	317
Psp6I	CCWGG	4 cut(s)	895, 912, 944, 1166
PspGI	CCWGG	4 cut(s)	895, 912, 944, 1166
PspN4I	GGNNCC	1 cut(s)	318
PspPI	GGNCC	5 cut(s)	317, 1164, 1232, 1241, 2012
PspPPI	RGGWCCY	1 cut(s)	317
PspXI	VCTCGAGB	1 cut(s)	1973
PstI	CTGCAG	1 cut(s)	1225
PsuI	RGATCY	1 cut(s)	1985
PvuI	CGATCG	2 cut(s)	922, 1692
RsaI	GTAC	4 cut(s)	63, 193, 398, 599
RsaNI	GTAC	4 cut(s)	62, 192, 397, 598
RseI	CAYNNNNRTG	4 cut(s)	254, 308, 767, 1058
SacI	GAGCTC	2 cut(s)	348, 810
SacII	CCGCGG	1 cut(s)	438
SapI	GCTCTTC	4 cut(s)	437, 638, 815, 946
SaqAI	TTAA	4 cut(s)	356, 1382, 1740, 1823
SatI	GCNGC	5 cut(s)	438, 1079, 1221, 1770, 1785
Sau3AI	GATC	6 cut(s)	679, 919, 1131, 1207, 1689, 1985
Sau96I	GGNCC	5 cut(s)	317, 1164, 1232, 1241, 2012
SchI	GAGTC	4 cut(s)	984, 1024, 1130, 2090
ScrFI	CCNGG	7 cut(s)	897, 914, 946, 984, 1020, 1021, 1168
SduI	GDGCHC	6 cut(s)	348, 633, 810, 1698, 1735, 1938
SfaNI	GCATC	7 cut(s)	120, 150, 491, 600, 1096, 1237, 1637
SfcI	CTRYAG	1 cut(s)	1221
Sfr274I	CTCGAG	1 cut(s)	1973
Sfr303I	CCGCGG	1 cut(s)	438
SgrBI	CCGCGG	1 cut(s)	438
SinI	GGWCC	4 cut(s)	317, 1164, 1241, 2012
SlaI	CTCGAG	1 cut(s)	1973
SmaI	CCCGGG	1 cut(s)	1021
SmiMI	CAYNNNNRTG	4 cut(s)	254, 308, 767, 1058
SmlI	CTYRAG	2 cut(s)	1958, 1973
SmoI	CTYRAG	2 cut(s)	1958, 1973
Sse9I	AATT	8 cut(s)	184, 378, 470, 648, 1114, 1335, 1482, 1710
SsiI	CCGC	4 cut(s)	435, 437, 1327, 1769
SstI	GAGCTC	2 cut(s)	348, 810
StyD4I	CCNGG	7 cut(s)	895, 912, 944, 982, 1018, 1019, 1166
StyI	CCWWGG	1 cut(s)	177
TaaI	ACNGT	6 cut(s)	281, 410, 1099, 1112, 1700, 1911
TaiI	ACGT	2 cut(s)	398, 1683
TaqI	TCGA	5 cut(s)	166, 554, 918, 1692, 1974
TaqII	GACCGA	1 cut(s)	2029
TasI	AATT	8 cut(s)	184, 378, 470, 648, 1114, 1335, 1482, 1710
TauI	GCSGC	2 cut(s)	440, 1772
TfiI	GAWTC	7 cut(s)	5, 51, 168, 933, 989, 1429, 1966
Tru1I	TTAA	4 cut(s)	356, 1382, 1740, 1823
Tru9I	TTAA	4 cut(s)	356, 1382, 1740, 1823
TscAI	CASTG	4 cut(s)	1102, 1141, 1303, 1794
TseFI	GTSAC	4 cut(s)	263, 673, 1375, 1495
TseI	GCWGC	3 cut(s)	1078, 1220, 1784
Tsp45I	GTSAC	4 cut(s)	263, 673, 1375, 1495
TspGWI	ACGGA	2 cut(s)	27, 79
TspMI	CCCGGG	1 cut(s)	1019
TspRI	CASTG	4 cut(s)	1102, 1141, 1303, 1794
VneI	GTGCAC	1 cut(s)	1934
VpaK11BI	GGWCC	4 cut(s)	317, 1164, 1241, 2012
XapI	RAATTY	2 cut(s)	648, 1710
XhoI	CTCGAG	1 cut(s)	1973
XmaI	CCCGGG	1 cut(s)	1019
XmiI	GTMKAC	1 cut(s)	1442
XmnI	GAANNNNTTC	1 cut(s)	1899
Zsp2I	ATGCAT	1 cut(s)	2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.