Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Forward (+)

18256892 .. 18268533

Gene Structure 11642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028068

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACGGACAGCTATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGATCTATGTCATGATGCCCACAAACACATATAGGCAAATATGGCTGCCTCGAATCCGAGCTGAGGCCGGTTCAAGTACCTATTTTGGAGCACATGGTTCAACTCTTCTGTTTTACACATTTCCCATTATGTTCATTGCTGTGATGGGTTGTGTGTATCTCCATCTGGGAAAGAAGATTAATGATTATAAAATGGAAAGTGACGGCAAAACGAACCGTATAGCTGTGTGGAAACAGCCCATGCTGGTGAAAGGTCCCTTAGGCATTGTTTCTGGGATAGAGTTCACCTTCTTCATCATGTTCATTGCACTCCTAATTTGGTCTATCTCCACGTACTTGACCAACGGTTTTAAGATAATCACACCACAATCCTCGGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGAGAGTGCATCATTGAGGCTAGGGGTTGTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTCGCTCGTGGCTCCTCGATCTTGCCTCTGTTTGGCCTCACCTCCGAGGCTAGCATCAAGTACCATATATGGGTAGGAAACATACTAATGGTGCTCTTTACAGCTCATGGAACTTCGGGAGAGCTAGCTTTGCTCTCTGGACTTGCCCTGTGGGTGGCTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCCGTTCATGGTCTTCTTCATCTTTCATGTCGGTGTCGGCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCATGGTTGATCGTTACCTACGATTCTTGCAATCCGAGAGAAGAGCACGTTTAGTCTCTGCCCGAATCTTGCCGGGTGAATCTCTAGAACTCAACTTTGCCAAAAGTCCGGGTTTGAAATACAATCCAACAAGCGTCATGTCACTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTACACTGTTACTTCAAACAGTAACTTGGAGCCAGAGAAGATCAGTGTAGTCATTAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTGCTTCGTCGCCTTCTACTAGTGCTCGGATTGAGGCTGCTGTTGAAGGACCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTTAGTGGAGGCAGTGGCATTACCCCTTTCATGTCCATAATTCTGACCTTAATCTGTGCATTTAAACACTCTTCGGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTAACAAGAGACACACAGCCAAAAGATAACTCAATGAACCTCAGAAGCATATGGTTCAAACCCCTTGCCATTGATGAACCCGTTTCAGCCATTTTGGGACCAAACCACTGGCTCTGGCTTGGCCTGATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGGATCGTCACCAGATATTACATTTTTCCGATCGATCACAACTCCAATAAGATATTTTCGTCTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCGGCAACAGCTAGTGCAGCAATGTTGTGGAACAAGGGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCACATAGAAGCCTCACCACCAAGGGGTTCAGAGGTTTATAATGCAGAAAGAGAGTTAGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCCACCAATGTGCACTATGGTCAAAGGCCTGACCTCAAGAGGATTCTATTTGAGTGCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGGCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

680

Amino Acids

75.88

Weight (kDa)

9.41

Isoelectric Point (pI)

44.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	182 - 234	8.3e-06	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	310 - 411	3.3e-21	FAD-binding domain
NAD_binding_6	PF08030	418 - 662	1.7e-09	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1812
Acc36I	ACCTGC	1 cut(s)	1756
AccI	GTMKAC	1 cut(s)	1379
AciI	CCGC	1 cut(s)	1706
AclWI	GGATC	2 cut(s)	1607, 1930
AfaI	GTAC	4 cut(s)	63, 193, 449, 650
AfiI	CCNNNNNNNGG	7 cut(s)	178, 620, 658, 742, 817, 886, 1796
AgsI	TTSAA	7 cut(s)	9, 189, 216, 1000, 1089, 1214, 1489
AhlI	ACTAGT	1 cut(s)	1187
AjnI	CCWGG	2 cut(s)	868, 1148
AleI	CACNNNNGTG	1 cut(s)	1868
Alw21I	GWGCWC	6 cut(s)	208, 684, 783, 931, 1195, 1875
Alw26I	GTCTC	4 cut(s)	943, 1434, 1662, 1854
Alw44I	GTGCAC	1 cut(s)	1871
AlwI	GGATC	2 cut(s)	1607, 1930
AoxI	GGCC	4 cut(s)	180, 622, 1552, 1886
ApaLI	GTGCAC	1 cut(s)	1871
ApeKI	GCWGC	4 cut(s)	160, 1060, 1205, 1721
AseI	ATTAAT	1 cut(s)	294
Asp700I	GAANNNNTTC	1 cut(s)	1836
AspLEI	GCGC	1 cut(s)	768
AspS9I	GGNCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
AsuC2I	CCSGG	2 cut(s)	957, 993
AsuHPI	GGTGA	8 cut(s)	24, 373, 391, 619, 971, 1145, 1597, 1779
AsuNHI	GCTAGC	2 cut(s)	638, 712
AvaII	GGWCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
AxyI	CCTNAGG	1 cut(s)	373
BaeGI	GKGCMC	1 cut(s)	1875
BanII	GRGCYC	2 cut(s)	783, 1672
BauI	CACGAG	1 cut(s)	594
BbsI	GAAGAC	1 cut(s)	814
Bbv12I	GWGCWC	6 cut(s)	208, 684, 783, 931, 1195, 1875
BbvCI	CCTCAGC	1 cut(s)	177
BbvI	GCAGC	4 cut(s)	147, 1047, 1192, 1733
BccI	CCATC	3 cut(s)	253, 285, 2030
BceAI	ACGGC	1 cut(s)	334
BciT130I	CCWGG	2 cut(s)	870, 1150
BclI	TGATCA	1 cut(s)	1557
BcnI	CCSGG	2 cut(s)	957, 993
BcoDI	GTCTC	4 cut(s)	943, 1434, 1662, 1854
BcuI	ACTAGT	1 cut(s)	1187
BfaI	CTAG	9 cut(s)	545, 639, 713, 968, 1047, 1188, 1358, 1716, 1944
BfuAI	ACCTGC	1 cut(s)	1756
BisI	GCNGC	5 cut(s)	161, 1061, 1206, 1707, 1722
BlsI	GCNGC	5 cut(s)	162, 1062, 1207, 1708, 1723
Bme1390I	CCNGG	4 cut(s)	870, 957, 993, 1150
Bme18I	GGWCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
BmgT120I	GGNCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
BmiI	GGNNCC	4 cut(s)	370, 601, 1104, 1530
BmrFI	CCNGG	4 cut(s)	870, 957, 993, 1150
BmsI	GCATC	6 cut(s)	120, 542, 651, 1078, 1222, 1574
BmtI	GCTAGC	2 cut(s)	642, 716
BpiI	GAAGAC	1 cut(s)	814
BpmI	CTGGAG	1 cut(s)	1394
Bpu10I	CCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	1 cut(s)	1880
BpuMI	CCSGG	2 cut(s)	957, 993
Bsa29I	ATCGAT	1 cut(s)	1629
BsaAI	YACGTR	1 cut(s)	447
BsaBI	GATNNNNATC	1 cut(s)	1598
BsaJI	CCNNGG	5 cut(s)	486, 633, 868, 1752, 1793
BsaWI	WCCGGW	1 cut(s)	586
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	7 cut(s)	178, 620, 658, 742, 817, 886, 1796
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	1 cut(s)	1544
Bse21I	CCTNAGG	1 cut(s)	373
Bse3DI	GCAATG	4 cut(s)	249, 417, 1070, 1731
Bse8I	GATNNNNATC	1 cut(s)	1598
BseBI	CCWGG	2 cut(s)	870, 1150
BseCI	ATCGAT	1 cut(s)	1629
BseDI	CCNNGG	5 cut(s)	486, 633, 868, 1752, 1793
BseGI	GGATG	2 cut(s)	807, 1069
BseJI	GATNNNNATC	1 cut(s)	1598
BseLI	CCNNNNNNNGG	7 cut(s)	178, 620, 658, 742, 817, 886, 1796
BseMI	GCAATG	4 cut(s)	249, 417, 1070, 1731
BseMII	CTCAG	2 cut(s)	168, 1486
BseNI	ACTGG	1 cut(s)	1544
BseRI	GAGGAG	1 cut(s)	592
BseSI	GKGCMC	1 cut(s)	1875
BseXI	GCAGC	4 cut(s)	147, 1047, 1192, 1733
BsgI	GTGCAG	1 cut(s)	1740
Bsh1285I	CGRYCG	2 cut(s)	591, 1629
BshFI	GGCC	4 cut(s)	182, 624, 1554, 1888
BshVI	ATCGAT	1 cut(s)	1629
BsiEI	CGRYCG	2 cut(s)	591, 1629
BsiHKAI	GWGCWC	6 cut(s)	208, 684, 783, 931, 1195, 1875
BsiSI	CCGG	4 cut(s)	183, 587, 956, 992
BslFI	GGGAC	3 cut(s)	25, 354, 1542
BslI	CCNNNNNNNGG	7 cut(s)	178, 620, 658, 742, 817, 886, 1796
BsmAI	GTCTC	4 cut(s)	943, 1434, 1662, 1854
BsmBI	CGTCTC	1 cut(s)	1662
BsmFI	GGGAC	3 cut(s)	25, 354, 1542
BsnI	GGCC	4 cut(s)	182, 624, 1554, 1888
Bsp1286I	GDGCHC	7 cut(s)	208, 684, 783, 931, 1195, 1672, 1875
Bsp143I	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
BspACI	CCGC	1 cut(s)	1706
BspANI	GGCC	4 cut(s)	182, 624, 1554, 1888
BspCNI	CTCAG	2 cut(s)	169, 1485
BspDI	ATCGAT	1 cut(s)	1629
BspHI	TCATGA	2 cut(s)	126, 1575
BspLI	GGNNCC	4 cut(s)	370, 601, 1104, 1530
BspMI	ACCTGC	1 cut(s)	1756
BspOI	GCTAGC	2 cut(s)	642, 716
BspPI	GGATC	2 cut(s)	1607, 1930
BspQI	GCTCTTC	2 cut(s)	788, 919
BsrDI	GCAATG	4 cut(s)	249, 417, 1070, 1731
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	1 cut(s)	1544
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	5 cut(s)	486, 633, 868, 1752, 1793
BssMI	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
BssSI	CACGAG	1 cut(s)	594
BssT1I	CCWWGG	2 cut(s)	1752, 1793
Bst2BI	CACGAG	1 cut(s)	594
Bst2UI	CCWGG	2 cut(s)	870, 1150
Bst4CI	ACNGT	5 cut(s)	332, 461, 1081, 1094, 1848
Bst6I	CTCTTC	6 cut(s)	225, 584, 788, 887, 919, 1345
BstBAI	YACGTR	1 cut(s)	447
BstC8I	GCNNGC	3 cut(s)	640, 714, 856
BstDEI	CTNAG	5 cut(s)	85, 177, 373, 1247, 1472
BstF5I	GGATG	2 cut(s)	807, 1069
BstHHI	GCGC	1 cut(s)	768
BstKTI	GATC	9 cut(s)	120, 609, 895, 1116, 1560, 1602, 1629, 1633, 1925
BstMAI	GTCTC	4 cut(s)	943, 1434, 1662, 1854
BstMBI	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
BstMCI	CGRYCG	2 cut(s)	591, 1629
BstMWI	GCNNNNNNNGC	8 cut(s)	157, 718, 765, 855, 1066, 1712, 1721, 1771
BstNI	CCWGG	2 cut(s)	870, 1150
BstSCI	CCNGG	4 cut(s)	868, 955, 991, 1148
BstSLI	GKGCMC	1 cut(s)	1875
BstV1I	GCAGC	4 cut(s)	147, 1047, 1192, 1733
BstV2I	GAAGAC	1 cut(s)	814
BstXI	CCANNNNNNTGG	1 cut(s)	1539
Bsu15I	ATCGAT	1 cut(s)	1629
Bsu36I	CCTNAGG	1 cut(s)	373
BsuRI	GGCC	4 cut(s)	182, 624, 1554, 1888
BsuTUI	ATCGAT	1 cut(s)	1629
BtsCI	GGATG	2 cut(s)	807, 1069
BtsI	GCAGTG	1 cut(s)	1288
BtsIMutI	CAGTG	4 cut(s)	1077, 1123, 1288, 1537
BveI	ACCTGC	1 cut(s)	1756
Cac8I	GCNNGC	3 cut(s)	640, 714, 856
CciI	TCATGA	2 cut(s)	126, 1575
CfoI	GCGC	1 cut(s)	768
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
ClaI	ATCGAT	1 cut(s)	1629
CseI	GACGC	1 cut(s)	1006
Csp6I	GTAC	4 cut(s)	62, 192, 448, 649
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 448, 649
DdeI	CTNAG	5 cut(s)	85, 177, 373, 1247, 1472
DpnI	GATC	9 cut(s)	119, 608, 894, 1115, 1559, 1601, 1628, 1632, 1924
DpnII	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
DraI	TTTAAA	1 cut(s)	1333
Eam1104I	CTCTTC	6 cut(s)	225, 584, 788, 887, 919, 1345
EarI	CTCTTC	6 cut(s)	225, 584, 788, 887, 919, 1345
Ecl136II	GAGCTC	1 cut(s)	781
Eco130I	CCWWGG	2 cut(s)	1752, 1793
Eco147I	AGGCCT	1 cut(s)	1888
Eco24I	GRGCYC	2 cut(s)	783, 1672
Eco47I	GGWCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
Eco53kI	GAGCTC	1 cut(s)	781
Eco81I	CCTNAGG	1 cut(s)	373
EcoICRI	GAGCTC	1 cut(s)	781
EcoO109I	RGGNCCY	2 cut(s)	368, 1217
EcoRII	CCWGG	2 cut(s)	868, 1148
EcoT14I	CCWWGG	2 cut(s)	1752, 1793
EcoT22I	ATGCAT	1 cut(s)	2013
EcoT38I	GRGCYC	2 cut(s)	783, 1672
ErhI	CCWWGG	2 cut(s)	1752, 1793
Esp3I	CGTCTC	1 cut(s)	1662
FaqI	GGGAC	3 cut(s)	25, 354, 1542
FauNDI	CATATG	4 cut(s)	563, 1393, 1429, 1481
FbaI	TGATCA	1 cut(s)	1557
FblI	GTMKAC	1 cut(s)	1379
Fnu4HI	GCNGC	5 cut(s)	161, 1061, 1206, 1707, 1722
FokI	GGATG	2 cut(s)	794, 1056
FriOI	GRGCYC	2 cut(s)	783, 1672
Fsp4HI	GCNGC	5 cut(s)	161, 1061, 1206, 1707, 1722
FspBI	CTAG	9 cut(s)	545, 639, 713, 968, 1047, 1188, 1358, 1716, 1944
GlaI	GCGC	1 cut(s)	767
GluI	GCNGC	5 cut(s)	161, 1061, 1206, 1707, 1722
GsuI	CTGGAG	1 cut(s)	1394
HaeIII	GGCC	4 cut(s)	182, 624, 1554, 1888
HapII	CCGG	4 cut(s)	183, 587, 956, 992
HgaI	GACGC	1 cut(s)	1006
HhaI	GCGC	1 cut(s)	768
Hin6I	GCGC	1 cut(s)	766
HinP1I	GCGC	1 cut(s)	766
HindIII	AAGCTT	1 cut(s)	1154
HinfI	GANTC	9 cut(s)	5, 51, 168, 906, 948, 962, 1366, 1903, 2018
HpaII	CCGG	4 cut(s)	183, 587, 956, 992
HphI	GGTGA	8 cut(s)	24, 373, 391, 619, 971, 1145, 1597, 1779
Hpy166II	GTNNAC	4 cut(s)	399, 1380, 1873, 1949
Hpy188III	TCNNGA	8 cut(s)	127, 705, 726, 968, 1411, 1576, 1591, 1897
Hpy8I	GTNNAC	4 cut(s)	399, 1380, 1873, 1949
Hpy99I	CGWCG	1 cut(s)	1180
HpyAV	CCTTC	7 cut(s)	41, 412, 1130, 1191, 1208, 1582, 1847
HpyCH4III	ACNGT	5 cut(s)	332, 461, 1081, 1094, 1848
HpyCH4IV	ACGT	2 cut(s)	446, 931
HpyF10VI	GCNNNNNNNGC	8 cut(s)	157, 718, 765, 855, 1066, 1712, 1721, 1771
HpyF3I	CTNAG	5 cut(s)	85, 177, 373, 1247, 1472
HpySE526I	ACGT	2 cut(s)	446, 931
HspAI	GCGC	1 cut(s)	766
Ksp22I	TGATCA	1 cut(s)	1557
Kzo9I	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
LguI	GCTCTTC	2 cut(s)	788, 919
LmnI	GCTCC	4 cut(s)	203, 605, 870, 1102
Lsp1109I	GCAGC	4 cut(s)	147, 1047, 1192, 1733
LweI	GCATC	6 cut(s)	120, 542, 651, 1078, 1222, 1574
MaeI	CTAG	9 cut(s)	545, 639, 713, 968, 1047, 1188, 1358, 1716, 1944
MaeII	ACGT	2 cut(s)	446, 931
MaeIII	GTNAC	8 cut(s)	314, 557, 896, 1023, 1081, 1094, 1432, 1603
MalI	GATC	9 cut(s)	119, 608, 894, 1115, 1559, 1601, 1628, 1632, 1924
MboI	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
MhlI	GDGCHC	7 cut(s)	208, 684, 783, 931, 1195, 1672, 1875
MluCI	AATT	4 cut(s)	429, 521, 1308, 1419
MlyI	GAGTC	1 cut(s)	2027
MmeI	TCCRAC	2 cut(s)	1034, 1124
Mph1103I	ATGCAT	1 cut(s)	2013
MroXI	GAANNNNTTC	1 cut(s)	1836
MseI	TTAA	7 cut(s)	294, 465, 1128, 1319, 1332, 1677, 1760
MslI	CAYNNNNRTG	6 cut(s)	254, 359, 674, 840, 1040, 1868
MspI	CCGG	4 cut(s)	183, 587, 956, 992
MspR9I	CCNGG	4 cut(s)	870, 957, 993, 1150
MvaI	CCWGG	2 cut(s)	870, 1150
MwoI	GCNNNNNNNGC	8 cut(s)	157, 718, 765, 855, 1066, 1712, 1721, 1771
NciI	CCSGG	2 cut(s)	957, 993
NdeI	CATATG	4 cut(s)	563, 1393, 1429, 1481
NdeII	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
NheI	GCTAGC	2 cut(s)	638, 712
NlaIV	GGNNCC	4 cut(s)	370, 601, 1104, 1530
NmeAIII	GCCGAG	1 cut(s)	467
NmuCI	GTSAC	3 cut(s)	314, 1023, 1603
NsiI	ATGCAT	1 cut(s)	2013
OliI	CACNNNNGTG	1 cut(s)	1868
PagI	TCATGA	2 cut(s)	126, 1575
PceI	AGGCCT	1 cut(s)	1888
PciSI	GCTCTTC	2 cut(s)	788, 919
PcsI	WCGNNNNNNNCGW	1 cut(s)	901
PdmI	GAANNNNTTC	1 cut(s)	1836
PfeI	GAWTC	8 cut(s)	5, 51, 168, 906, 948, 962, 1366, 1903
PkrI	GCNGC	5 cut(s)	162, 1062, 1207, 1708, 1723
Ple19I	CGATCG	1 cut(s)	1629
PleI	GAGTC	1 cut(s)	2026
PpsI	GAGTC	1 cut(s)	2026
Ppu21I	YACGTR	1 cut(s)	447
PpuMI	RGGWCCY	2 cut(s)	368, 1217
PshBI	ATTAAT	1 cut(s)	294
PsiI	TTATAA	2 cut(s)	303, 1812
Psp124BI	GAGCTC	1 cut(s)	783
Psp5II	RGGWCCY	2 cut(s)	368, 1217
Psp6I	CCWGG	2 cut(s)	868, 1148
PspGI	CCWGG	2 cut(s)	868, 1148
PspN4I	GGNNCC	4 cut(s)	370, 601, 1104, 1530
PspPI	GGNCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
PspPPI	RGGWCCY	2 cut(s)	368, 1217
PvuI	CGATCG	1 cut(s)	1629
RsaI	GTAC	4 cut(s)	63, 193, 449, 650
RsaNI	GTAC	4 cut(s)	62, 192, 448, 649
RseI	CAYNNNNRTG	6 cut(s)	254, 359, 674, 840, 1040, 1868
SacI	GAGCTC	1 cut(s)	783
SapI	GCTCTTC	2 cut(s)	788, 919
SaqAI	TTAA	7 cut(s)	294, 465, 1128, 1319, 1332, 1677, 1760
SatI	GCNGC	5 cut(s)	161, 1061, 1206, 1707, 1722
Sau3AI	GATC	9 cut(s)	117, 606, 892, 1113, 1557, 1599, 1626, 1630, 1922
Sau96I	GGNCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
SchI	GAGTC	1 cut(s)	2027
ScrFI	CCNGG	4 cut(s)	870, 957, 993, 1150
SduI	GDGCHC	7 cut(s)	208, 684, 783, 931, 1195, 1672, 1875
SfaNI	GCATC	6 cut(s)	120, 542, 651, 1078, 1222, 1574
SinI	GGWCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
SmiMI	CAYNNNNRTG	6 cut(s)	254, 359, 674, 840, 1040, 1868
SmlI	CTYRAG	1 cut(s)	1895
SmoI	CTYRAG	1 cut(s)	1895
SpeI	ACTAGT	1 cut(s)	1187
Sse9I	AATT	4 cut(s)	429, 521, 1308, 1419
SseBI	AGGCCT	1 cut(s)	1888
SsiI	CCGC	1 cut(s)	1706
SspMI	CTAG	9 cut(s)	545, 639, 713, 968, 1047, 1188, 1358, 1716, 1944
SstI	GAGCTC	1 cut(s)	783
StuI	AGGCCT	1 cut(s)	1888
StyD4I	CCNGG	4 cut(s)	868, 955, 991, 1148
StyI	CCWWGG	2 cut(s)	1752, 1793
TaaI	ACNGT	5 cut(s)	332, 461, 1081, 1094, 1848
TaiI	ACGT	2 cut(s)	449, 934
TaqI	TCGA	3 cut(s)	166, 605, 1629
TaqII	GACCGA	1 cut(s)	1966
TasI	AATT	4 cut(s)	429, 521, 1308, 1419
TauI	GCSGC	1 cut(s)	1709
TfiI	GAWTC	8 cut(s)	5, 51, 168, 906, 948, 962, 1366, 1903
Tru1I	TTAA	7 cut(s)	294, 465, 1128, 1319, 1332, 1677, 1760
Tru9I	TTAA	7 cut(s)	294, 465, 1128, 1319, 1332, 1677, 1760
TscAI	CASTG	4 cut(s)	1084, 1123, 1288, 1544
TseFI	GTSAC	3 cut(s)	314, 1023, 1603
TseI	GCWGC	4 cut(s)	160, 1060, 1205, 1721
Tsp45I	GTSAC	3 cut(s)	314, 1023, 1603
TspGWI	ACGGA	2 cut(s)	27, 79
TspRI	CASTG	4 cut(s)	1084, 1123, 1288, 1544
VneI	GTGCAC	1 cut(s)	1871
VpaK11BI	GGWCC	7 cut(s)	368, 1146, 1217, 1226, 1345, 1529, 1949
VspI	ATTAAT	1 cut(s)	294
XbaI	TCTAGA	1 cut(s)	967
XmiI	GTMKAC	1 cut(s)	1379
XmnI	GAANNNNTTC	1 cut(s)	1836
XspI	CTAG	9 cut(s)	545, 639, 713, 968, 1047, 1188, 1358, 1716, 1944
Zsp2I	ATGCAT	1 cut(s)	2013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.