ferric reduction oxidase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ferric_reduct | PF01794 | 183 - 303 | 9.9e-20 | Ferric reductase like transmembrane component |
| FAD_binding_8 | PF08022 | 338 - 434 | 1.1e-22 | FAD-binding domain |
| NAD_binding_6 | PF08030 | 441 - 701 | 2e-19 | Ferric reductase NAD binding domain |
| Ferric_reduct | PF01794 | 851 - 971 | 2.8e-20 | Ferric reductase like transmembrane component |
| FAD_binding_8 | PF08022 | 1005 - 1102 | 1.8e-23 | FAD-binding domain |
| NAD_binding_6 | PF08030 | 1109 - 1369 | 1.1e-19 | Ferric reductase NAD binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 303, 1929, 2307, 3933 |
| Acc36I | ACCTGC | 2 cut(s) | 1873, 3877 |
| AccI | GTMKAC | 2 cut(s) | 1496, 3500 |
| AccII | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| AciI | CCGC | 8 cut(s) | 489, 491, 785, 1823, 2493, 2495, 3385, 3428 |
| AclWI | GGATC | 3 cut(s) | 1724, 2047, 4051 |
| AcoI | YGGCCR | 1 cut(s) | 2817 |
| AcsI | RAATTY | 2 cut(s) | 738, 2706 |
| AcuI | CTGAAG | 1 cut(s) | 3447 |
| AcyI | GRCGYC | 1 cut(s) | 2928 |
| AfaI | GTAC | 7 cut(s) | 63, 193, 452, 653, 2197, 2456, 2657 |
| AjnI | CCWGG | 7 cut(s) | 949, 1220, 1415, 2953, 2970, 3002, 3224 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1404, 1436, 3408, 3440 |
| AleI | CACNNNNGTG | 1 cut(s) | 1985 |
| Alw26I | GTCTC | 8 cut(s) | 598, 1024, 1551, 1779, 2935, 3028, 3555, 3975 |
| Alw44I | GTGCAC | 2 cut(s) | 1988, 3992 |
| AlwI | GGATC | 3 cut(s) | 1724, 2047, 4051 |
| Ama87I | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| ApaI | GGGCCC | 1 cut(s) | 3294 |
| ApaLI | GTGCAC | 2 cut(s) | 1988, 3992 |
| ApeKI | GCWGC | 9 cut(s) | 160, 1132, 1274, 1838, 2164, 3136, 3278, 3827, 3842 |
| ApoI | RAATTY | 2 cut(s) | 738, 2706 |
| AseI | ATTAAT | 1 cut(s) | 294 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1953, 3957 |
| AspLEI | GCGC | 6 cut(s) | 208, 849, 2212, 2853, 3016, 3653 |
| AsuC2I | CCSGG | 5 cut(s) | 1038, 1074, 3042, 3078, 3079 |
| AsuNHI | GCTAGC | 4 cut(s) | 641, 793, 2645, 2797 |
| AvaI | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| BaeGI | GKGCMC | 3 cut(s) | 1992, 3294, 3996 |
| BalI | TGGCCA | 1 cut(s) | 2819 |
| BanII | GRGCYC | 6 cut(s) | 402, 864, 2406, 2868, 3294, 3793 |
| BauI | CACGAG | 2 cut(s) | 597, 2601 |
| BbsI | GAAGAC | 3 cut(s) | 895, 2899, 3950 |
| BbvCI | CCTCAGC | 2 cut(s) | 177, 2181 |
| BbvI | GCAGC | 9 cut(s) | 147, 1119, 1261, 1850, 2151, 3123, 3265, 3814, 3854 |
| BccI | CCATC | 5 cut(s) | 253, 314, 2257, 2289, 4151 |
| BceAI | ACGGC | 3 cut(s) | 1419, 2341, 3423 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1979, 2013 |
| BciT130I | CCWGG | 7 cut(s) | 951, 1222, 1417, 2955, 2972, 3004, 3226 |
| BclI | TGATCA | 1 cut(s) | 1674 |
| BcnI | CCSGG | 5 cut(s) | 1038, 1074, 3042, 3078, 3079 |
| BcoDI | GTCTC | 8 cut(s) | 598, 1024, 1551, 1779, 2935, 3028, 3555, 3975 |
| BfmI | CTRYAG | 1 cut(s) | 3279 |
| BfuAI | ACCTGC | 2 cut(s) | 1873, 3877 |
| BmeT110I | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| BmiI | GGNNCC | 5 cut(s) | 604, 1176, 1647, 3180, 3292 |
| BmtI | GCTAGC | 4 cut(s) | 645, 797, 2649, 2801 |
| BpiI | GAAGAC | 3 cut(s) | 895, 2899, 3950 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 170, 202, 2174, 2206 |
| BpmI | CTGGAG | 3 cut(s) | 1511, 2811, 3515 |
| Bpu10I | CCTNAGC | 2 cut(s) | 177, 2181 |
| BpuEI | CTTGAG | 4 cut(s) | 172, 1997, 2176, 4001 |
| BpuMI | CCSGG | 5 cut(s) | 1038, 1074, 3042, 3078, 3079 |
| Bsa29I | ATCGAT | 1 cut(s) | 1746 |
| BsaAI | YACGTR | 2 cut(s) | 450, 2454 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1715, 3719 |
| BsaHI | GRCGYC | 1 cut(s) | 2928 |
| BsaI | GGTCTC | 3 cut(s) | 598, 3028, 3555 |
| BsaWI | WCCGGW | 2 cut(s) | 589, 2593 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 96, 126 |
| Bse118I | RCCGGY | 2 cut(s) | 182, 2186 |
| Bse1I | ACTGG | 5 cut(s) | 772, 1661, 2776, 2820, 3665 |
| Bse3DI | GCAATG | 7 cut(s) | 249, 420, 1142, 1848, 2237, 2253, 3146 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1715, 3719 |
| BseBI | CCWGG | 7 cut(s) | 951, 1222, 1417, 2955, 2972, 3004, 3226 |
| BseCI | ATCGAT | 1 cut(s) | 1746 |
| BseGI | GGATG | 5 cut(s) | 888, 1141, 2832, 2892, 3145 |
| BseJI | GATNNNNATC | 2 cut(s) | 1715, 3719 |
| BseMI | GCAATG | 7 cut(s) | 249, 420, 1142, 1848, 2237, 2253, 3146 |
| BseMII | CTCAG | 5 cut(s) | 168, 1603, 2172, 2631, 3607 |
| BseNI | ACTGG | 5 cut(s) | 772, 1661, 2776, 2820, 3665 |
| BseRI | GAGGAG | 1 cut(s) | 595 |
| BseSI | GKGCMC | 3 cut(s) | 1992, 3294, 3996 |
| BseXI | GCAGC | 9 cut(s) | 147, 1119, 1261, 1850, 2151, 3123, 3265, 3814, 3854 |
| BsgI | GTGCAG | 2 cut(s) | 1857, 3861 |
| Bsh1236I | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1746, 3750 |
| BshVI | ATCGAT | 1 cut(s) | 1746 |
| BsiEI | CGRYCG | 2 cut(s) | 1746, 3750 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| BsiSI | CCGG | 8 cut(s) | 183, 590, 1037, 1073, 2187, 2594, 3041, 3078 |
| BslFI | GGGAC | 4 cut(s) | 25, 1659, 1951, 3060 |
| BsmAI | GTCTC | 8 cut(s) | 598, 1024, 1551, 1779, 2935, 3028, 3555, 3975 |
| BsmBI | CGTCTC | 2 cut(s) | 1779, 2935 |
| BsmFI | GGGAC | 4 cut(s) | 25, 1659, 1951, 3060 |
| BsmI | GAATGC | 1 cut(s) | 3449 |
| Bso31I | GGTCTC | 3 cut(s) | 598, 3028, 3555 |
| BsoBI | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| Bsp120I | GGGCCC | 1 cut(s) | 3290 |
| Bsp68I | TCGCGA | 1 cut(s) | 1383 |
| BspACI | CCGC | 8 cut(s) | 489, 491, 785, 1823, 2493, 2495, 3385, 3428 |
| BspCNI | CTCAG | 5 cut(s) | 169, 1602, 2173, 2632, 3606 |
| BspDI | ATCGAT | 1 cut(s) | 1746 |
| BspFNI | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| BspHI | TCATGA | 4 cut(s) | 126, 1692, 2130, 3696 |
| BspLI | GGNNCC | 5 cut(s) | 604, 1176, 1647, 3180, 3292 |
| BspMAI | CTGCAG | 1 cut(s) | 3283 |
| BspMI | ACCTGC | 2 cut(s) | 1873, 3877 |
| BspOI | GCTAGC | 4 cut(s) | 645, 797, 2649, 2801 |
| BspPI | GGATC | 3 cut(s) | 1724, 2047, 4051 |
| BspQI | GCTCTTC | 5 cut(s) | 869, 1000, 2696, 2873, 3004 |
| BspTNI | GGTCTC | 3 cut(s) | 598, 3028, 3555 |
| BsrDI | GCAATG | 7 cut(s) | 249, 420, 1142, 1848, 2237, 2253, 3146 |
| BsrFI | RCCGGY | 2 cut(s) | 182, 2186 |
| BsrI | ACTGG | 5 cut(s) | 772, 1661, 2776, 2820, 3665 |
| BssAI | RCCGGY | 2 cut(s) | 182, 2186 |
| BssNI | GRCGYC | 1 cut(s) | 2928 |
| BssSI | CACGAG | 2 cut(s) | 597, 2601 |
| BssT1I | CCWWGG | 4 cut(s) | 1869, 1910, 3873, 3914 |
| Bst2BI | CACGAG | 2 cut(s) | 597, 2601 |
| Bst2UI | CCWGG | 7 cut(s) | 951, 1222, 1417, 2955, 2972, 3004, 3226 |
| BstACI | GRCGYC | 1 cut(s) | 2928 |
| BstBAI | YACGTR | 2 cut(s) | 450, 2454 |
| BstDEI | CTNAG | 8 cut(s) | 85, 177, 1316, 1589, 2181, 2640, 3320, 3593 |
| BstDSI | CCRYGG | 4 cut(s) | 489, 1401, 2493, 3405 |
| BstF5I | GGATG | 5 cut(s) | 888, 1141, 2832, 2892, 3145 |
| BstFNI | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| BstHHI | GCGC | 6 cut(s) | 208, 849, 2212, 2853, 3016, 3653 |
| BstMAI | GTCTC | 8 cut(s) | 598, 1024, 1551, 1779, 2935, 3028, 3555, 3975 |
| BstMCI | CGRYCG | 2 cut(s) | 1746, 3750 |
| BstNI | CCWGG | 7 cut(s) | 951, 1222, 1417, 2955, 2972, 3004, 3226 |
| BstSFI | CTRYAG | 1 cut(s) | 3279 |
| BstSLI | GKGCMC | 3 cut(s) | 1992, 3294, 3996 |
| BstUI | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| BstV1I | GCAGC | 9 cut(s) | 147, 1119, 1261, 1850, 2151, 3123, 3265, 3814, 3854 |
| BstV2I | GAAGAC | 3 cut(s) | 895, 2899, 3950 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1656 |
| Bsu15I | ATCGAT | 1 cut(s) | 1746 |
| BsuTUI | ATCGAT | 1 cut(s) | 1746 |
| BtgI | CCRYGG | 4 cut(s) | 489, 1401, 2493, 3405 |
| BtgZI | GCGATG | 1 cut(s) | 3234 |
| BtsCI | GGATG | 5 cut(s) | 888, 1141, 2832, 2892, 3145 |
| BtsI | GCAGTG | 5 cut(s) | 322, 1357, 2326, 3361, 3852 |
| BtuMI | TCGCGA | 1 cut(s) | 1383 |
| BveI | ACCTGC | 2 cut(s) | 1873, 3877 |
| CciI | TCATGA | 4 cut(s) | 126, 1692, 2130, 3696 |
| CfoI | GCGC | 6 cut(s) | 208, 849, 2212, 2853, 3016, 3653 |
| Cfr10I | RCCGGY | 2 cut(s) | 182, 2186 |
| Cfr42I | CCGCGG | 2 cut(s) | 492, 2496 |
| Cfr9I | CCCGGG | 1 cut(s) | 3077 |
| ClaI | ATCGAT | 1 cut(s) | 1746 |
| CseI | GACGC | 3 cut(s) | 1087, 2917, 3091 |
| Csp6I | GTAC | 7 cut(s) | 62, 192, 451, 652, 2196, 2455, 2656 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 32 |
| CviQI | GTAC | 7 cut(s) | 62, 192, 451, 652, 2196, 2455, 2656 |
| DdeI | CTNAG | 8 cut(s) | 85, 177, 1316, 1589, 2181, 2640, 3320, 3593 |
| DraI | TTTAAA | 1 cut(s) | 1450 |
| EaeI | YGGCCR | 1 cut(s) | 2817 |
| Ecl136II | GAGCTC | 4 cut(s) | 400, 862, 2404, 2866 |
| Eco130I | CCWWGG | 4 cut(s) | 1869, 1910, 3873, 3914 |
| Eco147I | AGGCCT | 1 cut(s) | 2005 |
| Eco24I | GRGCYC | 6 cut(s) | 402, 864, 2406, 2868, 3294, 3793 |
| Eco31I | GGTCTC | 3 cut(s) | 598, 3028, 3555 |
| Eco53kI | GAGCTC | 4 cut(s) | 400, 862, 2404, 2866 |
| Eco57I | CTGAAG | 1 cut(s) | 3447 |
| Eco88I | CYCGRG | 3 cut(s) | 3030, 3077, 4031 |
| EcoICRI | GAGCTC | 4 cut(s) | 400, 862, 2404, 2866 |
| EcoO109I | RGGNCCY | 5 cut(s) | 371, 1286, 2375, 3290, 3291 |
| EcoRII | CCWGG | 7 cut(s) | 949, 1220, 1415, 2953, 2970, 3002, 3224 |
| EcoT14I | CCWWGG | 4 cut(s) | 1869, 1910, 3873, 3914 |
| EcoT22I | ATGCAT | 1 cut(s) | 4134 |
| EcoT38I | GRGCYC | 6 cut(s) | 402, 864, 2406, 2868, 3294, 3793 |
| ErhI | CCWWGG | 4 cut(s) | 1869, 1910, 3873, 3914 |
| Esp3I | CGTCTC | 2 cut(s) | 1779, 2935 |
| FaqI | GGGAC | 4 cut(s) | 25, 1659, 1951, 3060 |
| FauI | CCCGC | 1 cut(s) | 778 |
| FauNDI | CATATG | 8 cut(s) | 566, 1510, 1546, 1598, 2570, 3514, 3550, 3602 |
| FbaI | TGATCA | 1 cut(s) | 1674 |
| FblI | GTMKAC | 2 cut(s) | 1496, 3500 |
| FokI | GGATG | 5 cut(s) | 875, 1128, 2839, 2879, 3132 |
| FriOI | GRGCYC | 6 cut(s) | 402, 864, 2406, 2868, 3294, 3793 |
| GlaI | GCGC | 6 cut(s) | 207, 848, 2211, 2852, 3015, 3652 |
| GsuI | CTGGAG | 3 cut(s) | 1511, 2811, 3515 |
| HapII | CCGG | 8 cut(s) | 183, 590, 1037, 1073, 2187, 2594, 3041, 3078 |
| HgaI | GACGC | 3 cut(s) | 1087, 2917, 3091 |
| HhaI | GCGC | 6 cut(s) | 208, 849, 2212, 2853, 3016, 3653 |
| Hin1I | GRCGYC | 1 cut(s) | 2928 |
| Hin6I | GCGC | 6 cut(s) | 206, 847, 2210, 2851, 3014, 3651 |
| HinP1I | GCGC | 6 cut(s) | 206, 847, 2210, 2851, 3014, 3651 |
| HindIII | AAGCTT | 3 cut(s) | 1226, 3230, 3422 |
| HpaII | CCGG | 8 cut(s) | 183, 590, 1037, 1073, 2187, 2594, 3041, 3078 |
| Hpy166II | GTNNAC | 8 cut(s) | 1401, 1497, 1990, 2066, 3405, 3501, 3994, 4070 |
| Hpy8I | GTNNAC | 8 cut(s) | 1401, 1497, 1990, 2066, 3405, 3501, 3994, 4070 |
| Hpy99I | CGWCG | 2 cut(s) | 1249, 2614 |
| HpyCH4IV | ACGT | 4 cut(s) | 449, 1012, 2453, 3738 |
| HpyF3I | CTNAG | 8 cut(s) | 85, 177, 1316, 1589, 2181, 2640, 3320, 3593 |
| HpySE526I | ACGT | 4 cut(s) | 449, 1012, 2453, 3738 |
| Hsp92I | GRCGYC | 1 cut(s) | 2928 |
| HspAI | GCGC | 6 cut(s) | 206, 847, 2210, 2851, 3014, 3651 |
| KroI | GCCGGC | 2 cut(s) | 182, 2186 |
| KroNI | GCCGGC | 2 cut(s) | 184, 2188 |
| Ksp22I | TGATCA | 1 cut(s) | 1674 |
| KspI | CCGCGG | 2 cut(s) | 492, 2496 |
| LguI | GCTCTTC | 5 cut(s) | 869, 1000, 2696, 2873, 3004 |
| LmnI | GCTCC | 7 cut(s) | 203, 608, 951, 1174, 2207, 2955, 3178 |
| Lsp1109I | GCAGC | 9 cut(s) | 147, 1119, 1261, 1850, 2151, 3123, 3265, 3814, 3854 |
| MaeII | ACGT | 4 cut(s) | 449, 1012, 2453, 3738 |
| MlsI | TGGCCA | 1 cut(s) | 2819 |
| MluNI | TGGCCA | 1 cut(s) | 2819 |
| MlyI | GAGTC | 3 cut(s) | 3042, 3082, 4148 |
| MmeI | TCCRAC | 5 cut(s) | 1115, 1196, 3119, 3200, 3930 |
| Mox20I | TGGCCA | 1 cut(s) | 2819 |
| Mph1103I | ATGCAT | 1 cut(s) | 4134 |
| MroNI | GCCGGC | 2 cut(s) | 182, 2186 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1953, 3957 |
| MscI | TGGCCA | 1 cut(s) | 2819 |
| Msp20I | TGGCCA | 1 cut(s) | 2819 |
| MspA1I | CMGCKG | 2 cut(s) | 491, 2495 |
| MspI | CCGG | 8 cut(s) | 183, 590, 1037, 1073, 2187, 2594, 3041, 3078 |
| Mva1269I | GAATGC | 1 cut(s) | 3449 |
| MvaI | CCWGG | 7 cut(s) | 951, 1222, 1417, 2955, 2972, 3004, 3226 |
| MvnI | CGCG | 5 cut(s) | 491, 1383, 2495, 3016, 3387 |
| NaeI | GCCGGC | 2 cut(s) | 184, 2188 |
| NciI | CCSGG | 5 cut(s) | 1038, 1074, 3042, 3078, 3079 |
| NdeI | CATATG | 8 cut(s) | 566, 1510, 1546, 1598, 2570, 3514, 3550, 3602 |
| NgoMIV | GCCGGC | 2 cut(s) | 182, 2186 |
| NheI | GCTAGC | 4 cut(s) | 641, 793, 2645, 2797 |
| NlaIV | GGNNCC | 5 cut(s) | 604, 1176, 1647, 3180, 3292 |
| NmuCI | GTSAC | 7 cut(s) | 727, 1429, 1720, 2321, 2731, 3433, 3553 |
| NruI | TCGCGA | 1 cut(s) | 1383 |
| NsiI | ATGCAT | 1 cut(s) | 4134 |
| OliI | CACNNNNGTG | 1 cut(s) | 1985 |
| PaeR7I | CTCGAG | 1 cut(s) | 4031 |
| PagI | TCATGA | 4 cut(s) | 126, 1692, 2130, 3696 |
| PceI | AGGCCT | 1 cut(s) | 2005 |
| PciSI | GCTCTTC | 5 cut(s) | 869, 1000, 2696, 2873, 3004 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 982, 2986 |
| PctI | GAATGC | 1 cut(s) | 3449 |
| PdiI | GCCGGC | 2 cut(s) | 184, 2188 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1953, 3957 |
| PfoI | TCCNGGA | 1 cut(s) | 3002 |
| Ple19I | CGATCG | 2 cut(s) | 1746, 3750 |
| PleI | GAGTC | 3 cut(s) | 3041, 3081, 4147 |
| PpsI | GAGTC | 3 cut(s) | 3041, 3081, 4147 |
| Ppu21I | YACGTR | 2 cut(s) | 450, 2454 |
| PpuMI | RGGWCCY | 3 cut(s) | 371, 1286, 2375 |
| PshBI | ATTAAT | 1 cut(s) | 294 |
| PsiI | TTATAA | 4 cut(s) | 303, 1929, 2307, 3933 |
| Psp124BI | GAGCTC | 4 cut(s) | 402, 864, 2406, 2868 |
| Psp5II | RGGWCCY | 3 cut(s) | 371, 1286, 2375 |
| Psp6I | CCWGG | 7 cut(s) | 949, 1220, 1415, 2953, 2970, 3002, 3224 |
| PspGI | CCWGG | 7 cut(s) | 949, 1220, 1415, 2953, 2970, 3002, 3224 |
| PspN4I | GGNNCC | 5 cut(s) | 604, 1176, 1647, 3180, 3292 |
| PspOMI | GGGCCC | 1 cut(s) | 3290 |
| PspPPI | RGGWCCY | 3 cut(s) | 371, 1286, 2375 |
| PspXI | VCTCGAGB | 1 cut(s) | 4031 |
| PstI | CTGCAG | 1 cut(s) | 3283 |
| PvuI | CGATCG | 2 cut(s) | 1746, 3750 |
| RruI | TCGCGA | 1 cut(s) | 1383 |
| RsaI | GTAC | 7 cut(s) | 63, 193, 452, 653, 2197, 2456, 2657 |
| RsaNI | GTAC | 7 cut(s) | 62, 192, 451, 652, 2196, 2455, 2656 |
| SacI | GAGCTC | 4 cut(s) | 402, 864, 2406, 2868 |
| SacII | CCGCGG | 2 cut(s) | 492, 2496 |
| SapI | GCTCTTC | 5 cut(s) | 869, 1000, 2696, 2873, 3004 |
| SchI | GAGTC | 3 cut(s) | 3042, 3082, 4148 |
| SfcI | CTRYAG | 1 cut(s) | 3279 |
| Sfr274I | CTCGAG | 1 cut(s) | 4031 |
| Sfr303I | CCGCGG | 2 cut(s) | 492, 2496 |
| SgrBI | CCGCGG | 2 cut(s) | 492, 2496 |
| SlaI | CTCGAG | 1 cut(s) | 4031 |
| SmaI | CCCGGG | 1 cut(s) | 3079 |
| SmlI | CTYRAG | 5 cut(s) | 187, 2012, 2191, 4016, 4031 |
| SmoI | CTYRAG | 5 cut(s) | 187, 2012, 2191, 4016, 4031 |
| SseBI | AGGCCT | 1 cut(s) | 2005 |
| SsiI | CCGC | 8 cut(s) | 489, 491, 785, 1823, 2493, 2495, 3385, 3428 |
| SstI | GAGCTC | 4 cut(s) | 402, 864, 2406, 2868 |
| StuI | AGGCCT | 1 cut(s) | 2005 |
| StyI | CCWWGG | 4 cut(s) | 1869, 1910, 3873, 3914 |
| TaiI | ACGT | 4 cut(s) | 452, 1015, 2456, 3741 |
| TaqI | TCGA | 8 cut(s) | 166, 608, 1746, 1999, 2170, 2612, 3750, 4032 |
| TaqII | GACCGA | 2 cut(s) | 2083, 4087 |
| TauI | GCSGC | 3 cut(s) | 494, 1826, 2498 |
| TseFI | GTSAC | 7 cut(s) | 727, 1429, 1720, 2321, 2731, 3433, 3553 |
| TseI | GCWGC | 9 cut(s) | 160, 1132, 1274, 1838, 2164, 3136, 3278, 3827, 3842 |
| Tsp45I | GTSAC | 7 cut(s) | 727, 1429, 1720, 2321, 2731, 3433, 3553 |
| TspGWI | ACGGA | 2 cut(s) | 27, 79 |
| TspMI | CCCGGG | 1 cut(s) | 3077 |
| VneI | GTGCAC | 2 cut(s) | 1988, 3992 |
| VspI | ATTAAT | 1 cut(s) | 294 |
| XapI | RAATTY | 2 cut(s) | 738, 2706 |
| XbaI | TCTAGA | 1 cut(s) | 1048 |
| XhoI | CTCGAG | 1 cut(s) | 4031 |
| XmaI | CCCGGG | 1 cut(s) | 3077 |
| XmiI | GTMKAC | 2 cut(s) | 1496, 3500 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1953, 3957 |
| Zsp2I | ATGCAT | 1 cut(s) | 4134 |