Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49412844 .. 49418670

Gene Structure 5827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G023560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGATTCAAATGTGGTGGTCATAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAATGGTACGGACAGCTATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGATCTATGTCATGATGCCCACAAACACATATAGGCAAATATGGCTGCCTCGAATCCGAGCTGAGGCCGGCTCAAGTACCTATTTTGGAGCGCAAGGTTCAACTCTTCTGTTTTACACATTTCCCATTATGTTCATTGCTGTGATGGGTTGTGTGTATCTCCATCTGGGAAAGAAGATTACTGATTATAAAATGGAAAGCAGTGATGGCAAAACGAACAGTATAGCTGTGTGGAAACAGCCCATGCTGGTGAAAGGTCCTTTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTCATTGCACTCCTAATTTGGTCTATCTCCACGTACTTGACCAACGGTTTTAAGATAATCACACCACAATCCGCCGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGAGAGTGCATCATTGAGGCTAGGGGTTGTCGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTCGCTCGTGGTGGCTCCTCGATCTTGCCTCTGTTTGGCCTCACCTCCGAGGCTAGCATCAAGTACCATATATGGGTAGGAAACATACTAATGGTGCTCTTTACAGCTCATGGAACTTGTTACATCATATATTGGGCTGTCACAGATCAAATTTCCCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCGGGAGAGCTAGCTTTGCTCTCTGGACTTGCCCTGTGGGTGGCTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCCGTTCATGGTCTTCTTCATCTTTCATGTCGGTGTCGGCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCATGGTTGATCGTTACCTACGATTCTTGCAATCCGAGAGAAGAGCACGTTTAGTCTCTGCCCGAATCTTGCCGGGTGAATCTCTAGAACTCAACTTTGCCAAAAGTCCGGGTTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTACACTGTTACTTCAAACAGTAACTTGGAGCCAGAGAAGATCAGTGTCGTCATTAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCGTCGCCTTCTACAAGTGCTCGGATTGAGGCTGCTGTTGAAGGACCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCGGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCGAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTAACAAGAGACACACAGCCAAAAGATAACTCAATGAACTTCAGAAGCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGACCAAACCACTGGCTCTGGCTTGGCCTGATCATAACATCTTCCTTCATGATGTTCCTCATCTTGATTGGGATCGTCACCAGATATTACATTTTTCCGATCGATCACAACTCCACTAAGATTTTTTCGTCTCCTTTGAGGGCTTTGTTTAATATGTTGGCTATATGTATCTCCATAGCGGCAACAGCTAGTGCAGCAATGTTGTGGAACAAGGGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCACATAGAAGCCTCATCACCAAGGGGTTCAGAGGTTTATAATGCAGAAAGAGAGTTAGAAAGCCTTCCTCAACAGTCCCTTGTCCAAGCCACCAATGTGCAGTATGGTCAAAGGCCTGACCTCAAGAGGATTCTATTTGAGTGCAAAGGATCAAATATTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGGCAGAAAATATGCATTTTAAGTCTATCAGCTTTAGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

719

Amino Acids

80.41

Weight (kDa)

9.27

Isoelectric Point (pI)

40.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	183 - 304	4.2e-19	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	338 - 435	4.2e-23	FAD-binding domain
NAD_binding_6	PF08030	442 - 702	2.6e-18	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1932
Acc36I	ACCTGC	1 cut(s)	1876
AccI	GTMKAC	1 cut(s)	1499
AccII	CGCG	1 cut(s)	1386
AciI	CCGC	6 cut(s)	489, 492, 788, 1353, 1384, 1826
AclWI	GGATC	2 cut(s)	1727, 2050
AcsI	RAATTY	1 cut(s)	741
AcuI	CTGAAG	2 cut(s)	1446, 1576
AfaI	GTAC	4 cut(s)	63, 193, 452, 656
AfiI	CCNNNNNNNGG	6 cut(s)	178, 626, 664, 826, 901, 970
AgsI	TTSAA	7 cut(s)	9, 216, 1084, 1164, 1286, 1453, 1609
AjnI	CCWGG	2 cut(s)	952, 1223
AjuI	GAANNNNNNNTTGG	2 cut(s)	1407, 1439
AleI	CACNNNNGTG	1 cut(s)	1988
Alw21I	GWGCWC	5 cut(s)	402, 690, 867, 1015, 1267
Alw26I	GTCTC	3 cut(s)	1027, 1554, 1782
AlwI	GGATC	2 cut(s)	1727, 2050
AoxI	GGCC	5 cut(s)	180, 628, 1407, 1672, 2006
ApeKI	GCWGC	4 cut(s)	160, 1135, 1277, 1841
ApoI	RAATTY	1 cut(s)	741
Asp700I	GAANNNNTTC	1 cut(s)	1956
AspLEI	GCGC	2 cut(s)	208, 852
AspS9I	GGNCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
AsuC2I	CCSGG	2 cut(s)	1041, 1077
AsuHPI	GGTGA	9 cut(s)	24, 376, 394, 625, 1055, 1220, 1354, 1717, 1902
AsuNHI	GCTAGC	2 cut(s)	644, 796
AvaII	GGWCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
BanII	GRGCYC	2 cut(s)	402, 867
BauI	CACGAG	1 cut(s)	597
BbsI	GAAGAC	1 cut(s)	898
Bbv12I	GWGCWC	5 cut(s)	402, 690, 867, 1015, 1267
BbvCI	CCTCAGC	1 cut(s)	177
BbvI	GCAGC	4 cut(s)	147, 1122, 1264, 1853
BccI	CCATC	3 cut(s)	253, 285, 314
BceAI	ACGGC	1 cut(s)	1422
BciT130I	CCWGG	2 cut(s)	954, 1225
BclI	TGATCA	1 cut(s)	1677
BcnI	CCSGG	2 cut(s)	1041, 1077
BcoDI	GTCTC	3 cut(s)	1027, 1554, 1782
BfaI	CTAG	8 cut(s)	548, 645, 797, 1052, 1122, 1478, 1836, 2064
BfuAI	ACCTGC	1 cut(s)	1876
BisI	GCNGC	6 cut(s)	161, 492, 1136, 1278, 1827, 1842
BlsI	GCNGC	6 cut(s)	162, 493, 1137, 1279, 1828, 1843
Bme1390I	CCNGG	4 cut(s)	954, 1041, 1077, 1225
Bme18I	GGWCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
BmgT120I	GGNCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
BmiI	GGNNCC	3 cut(s)	607, 1179, 1650
BmrFI	CCNGG	4 cut(s)	954, 1041, 1077, 1225
BmsI	GCATC	5 cut(s)	120, 545, 657, 1153, 1294
BmtI	GCTAGC	2 cut(s)	648, 800
BpiI	GAAGAC	1 cut(s)	898
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	1514
Bpu10I	CCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	2 cut(s)	172, 2000
BpuMI	CCSGG	2 cut(s)	1041, 1077
Bsa29I	ATCGAT	1 cut(s)	1749
BsaAI	YACGTR	1 cut(s)	450
BsaBI	GATNNNNATC	1 cut(s)	1718
BsaJI	CCNNGG	5 cut(s)	639, 952, 1404, 1872, 1913
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	6 cut(s)	178, 626, 664, 826, 901, 970
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	2 cut(s)	775, 1664
Bse3DI	GCAATG	4 cut(s)	249, 420, 1145, 1851
Bse8I	GATNNNNATC	1 cut(s)	1718
BseBI	CCWGG	2 cut(s)	954, 1225
BseCI	ATCGAT	1 cut(s)	1749
BseDI	CCNNGG	5 cut(s)	639, 952, 1404, 1872, 1913
BseGI	GGATG	2 cut(s)	891, 1144
BseJI	GATNNNNATC	1 cut(s)	1718
BseLI	CCNNNNNNNGG	6 cut(s)	178, 626, 664, 826, 901, 970
BseMI	GCAATG	4 cut(s)	249, 420, 1145, 1851
BseMII	CTCAG	1 cut(s)	168
BseNI	ACTGG	2 cut(s)	775, 1664
BseRI	GAGGAG	1 cut(s)	598
BseXI	GCAGC	4 cut(s)	147, 1122, 1264, 1853
BsgI	GTGCAG	2 cut(s)	1860, 2012
Bsh1236I	CGCG	1 cut(s)	1386
Bsh1285I	CGRYCG	2 cut(s)	594, 1749
BshFI	GGCC	5 cut(s)	182, 630, 1409, 1674, 2008
BshVI	ATCGAT	1 cut(s)	1749
BsiEI	CGRYCG	2 cut(s)	594, 1749
BsiHKAI	GWGCWC	5 cut(s)	402, 690, 867, 1015, 1267
BsiSI	CCGG	4 cut(s)	183, 590, 1040, 1076
BslFI	GGGAC	3 cut(s)	25, 1662, 1954
BslI	CCNNNNNNNGG	6 cut(s)	178, 626, 664, 826, 901, 970
BsmAI	GTCTC	3 cut(s)	1027, 1554, 1782
BsmBI	CGTCTC	1 cut(s)	1782
BsmFI	GGGAC	3 cut(s)	25, 1662, 1954
BsmI	GAATGC	1 cut(s)	1448
BsnI	GGCC	5 cut(s)	182, 630, 1409, 1674, 2008
Bsp1286I	GDGCHC	5 cut(s)	402, 690, 867, 1015, 1267
BspACI	CCGC	6 cut(s)	489, 492, 788, 1353, 1384, 1826
BspANI	GGCC	5 cut(s)	182, 630, 1409, 1674, 2008
BspCNI	CTCAG	1 cut(s)	169
BspDI	ATCGAT	1 cut(s)	1749
BspFNI	CGCG	1 cut(s)	1386
BspHI	TCATGA	2 cut(s)	126, 1695
BspLI	GGNNCC	3 cut(s)	607, 1179, 1650
BspMI	ACCTGC	1 cut(s)	1876
BspOI	GCTAGC	2 cut(s)	648, 800
BspPI	GGATC	2 cut(s)	1727, 2050
BspQI	GCTCTTC	2 cut(s)	872, 1003
BsrDI	GCAATG	4 cut(s)	249, 420, 1145, 1851
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	2 cut(s)	775, 1664
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	5 cut(s)	639, 952, 1404, 1872, 1913
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	2 cut(s)	1872, 1913
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	2 cut(s)	954, 1225
Bst4CI	ACNGT	5 cut(s)	335, 464, 1156, 1169, 1968
Bst6I	CTCTTC	6 cut(s)	225, 587, 872, 971, 1003, 1465
BstBAI	YACGTR	1 cut(s)	450
BstC8I	GCNNGC	6 cut(s)	184, 646, 798, 940, 1388, 1421
BstDEI	CTNAG	4 cut(s)	85, 177, 1319, 1764
BstDSI	CCRYGG	1 cut(s)	1404
BstF5I	GGATG	2 cut(s)	891, 1144
BstFNI	CGCG	1 cut(s)	1386
BstHHI	GCGC	2 cut(s)	208, 852
BstMAI	GTCTC	3 cut(s)	1027, 1554, 1782
BstMCI	CGRYCG	2 cut(s)	594, 1749
BstMWI	GCNNNNNNNGC	9 cut(s)	157, 321, 802, 849, 939, 1141, 1832, 1841, 1891
BstNI	CCWGG	2 cut(s)	954, 1225
BstSCI	CCNGG	4 cut(s)	952, 1039, 1075, 1223
BstUI	CGCG	1 cut(s)	1386
BstV1I	GCAGC	4 cut(s)	147, 1122, 1264, 1853
BstV2I	GAAGAC	1 cut(s)	898
BstXI	CCANNNNNNTGG	1 cut(s)	1659
Bsu15I	ATCGAT	1 cut(s)	1749
BsuRI	GGCC	5 cut(s)	182, 630, 1409, 1674, 2008
BsuTUI	ATCGAT	1 cut(s)	1749
BtgI	CCRYGG	1 cut(s)	1404
BtsCI	GGATG	2 cut(s)	891, 1144
BtsI	GCAGTG	1 cut(s)	322
BtsIMutI	CAGTG	4 cut(s)	322, 1152, 1198, 1657
BveI	ACCTGC	1 cut(s)	1876
Cac8I	GCNNGC	6 cut(s)	184, 646, 798, 940, 1388, 1421
CciI	TCATGA	2 cut(s)	126, 1695
CfoI	GCGC	2 cut(s)	208, 852
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
ClaI	ATCGAT	1 cut(s)	1749
CseI	GACGC	1 cut(s)	1090
Csp6I	GTAC	4 cut(s)	62, 192, 451, 655
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 451, 655
DdeI	CTNAG	4 cut(s)	85, 177, 1319, 1764
Eam1104I	CTCTTC	6 cut(s)	225, 587, 872, 971, 1003, 1465
EarI	CTCTTC	6 cut(s)	225, 587, 872, 971, 1003, 1465
EciI	GGCGGA	1 cut(s)	478
Ecl136II	GAGCTC	2 cut(s)	400, 865
Eco130I	CCWWGG	2 cut(s)	1872, 1913
Eco147I	AGGCCT	1 cut(s)	2008
Eco24I	GRGCYC	2 cut(s)	402, 867
Eco47I	GGWCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
Eco53kI	GAGCTC	2 cut(s)	400, 865
Eco57I	CTGAAG	2 cut(s)	1446, 1576
EcoICRI	GAGCTC	2 cut(s)	400, 865
EcoO109I	RGGNCCY	2 cut(s)	371, 1289
EcoRII	CCWGG	2 cut(s)	952, 1223
EcoT14I	CCWWGG	2 cut(s)	1872, 1913
EcoT22I	ATGCAT	1 cut(s)	2133
EcoT38I	GRGCYC	2 cut(s)	402, 867
ErhI	CCWWGG	2 cut(s)	1872, 1913
Esp3I	CGTCTC	1 cut(s)	1782
FaqI	GGGAC	3 cut(s)	25, 1662, 1954
FauI	CCCGC	1 cut(s)	781
FauNDI	CATATG	4 cut(s)	566, 1513, 1549, 1601
FbaI	TGATCA	1 cut(s)	1677
FblI	GTMKAC	1 cut(s)	1499
Fnu4HI	GCNGC	6 cut(s)	161, 492, 1136, 1278, 1827, 1842
FokI	GGATG	2 cut(s)	878, 1131
FriOI	GRGCYC	2 cut(s)	402, 867
Fsp4HI	GCNGC	6 cut(s)	161, 492, 1136, 1278, 1827, 1842
FspBI	CTAG	8 cut(s)	548, 645, 797, 1052, 1122, 1478, 1836, 2064
GlaI	GCGC	2 cut(s)	207, 851
GluI	GCNGC	6 cut(s)	161, 492, 1136, 1278, 1827, 1842
GsuI	CTGGAG	1 cut(s)	1514
HaeIII	GGCC	5 cut(s)	182, 630, 1409, 1674, 2008
HapII	CCGG	4 cut(s)	183, 590, 1040, 1076
HgaI	GACGC	1 cut(s)	1090
HhaI	GCGC	2 cut(s)	208, 852
Hin6I	GCGC	2 cut(s)	206, 850
HinP1I	GCGC	2 cut(s)	206, 850
HindIII	AAGCTT	1 cut(s)	1229
HinfI	GANTC	8 cut(s)	5, 51, 168, 990, 1032, 1046, 1486, 2023
HpaII	CCGG	4 cut(s)	183, 590, 1040, 1076
HphI	GGTGA	9 cut(s)	24, 376, 394, 625, 1055, 1220, 1354, 1717, 1902
Hpy166II	GTNNAC	3 cut(s)	1404, 1500, 2069
Hpy188III	TCNNGA	7 cut(s)	127, 810, 1052, 1531, 1696, 1711, 2017
Hpy8I	GTNNAC	3 cut(s)	1404, 1500, 2069
Hpy99I	CGWCG	1 cut(s)	1252
HpyAV	CCTTC	8 cut(s)	41, 415, 1205, 1263, 1280, 1420, 1702, 1967
HpyCH4III	ACNGT	5 cut(s)	335, 464, 1156, 1169, 1968
HpyCH4IV	ACGT	2 cut(s)	449, 1015
HpyF10VI	GCNNNNNNNGC	9 cut(s)	157, 321, 802, 849, 939, 1141, 1832, 1841, 1891
HpyF3I	CTNAG	4 cut(s)	85, 177, 1319, 1764
HpySE526I	ACGT	2 cut(s)	449, 1015
HspAI	GCGC	2 cut(s)	206, 850
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	1677
LguI	GCTCTTC	2 cut(s)	872, 1003
LmnI	GCTCC	4 cut(s)	203, 611, 954, 1177
Lsp1109I	GCAGC	4 cut(s)	147, 1122, 1264, 1853
LweI	GCATC	5 cut(s)	120, 545, 657, 1153, 1294
MaeI	CTAG	8 cut(s)	548, 645, 797, 1052, 1122, 1478, 1836, 2064
MaeII	ACGT	2 cut(s)	449, 1015
MaeIII	GTNAC	9 cut(s)	560, 710, 730, 980, 1156, 1169, 1432, 1552, 1723
MhlI	GDGCHC	5 cut(s)	402, 690, 867, 1015, 1267
MluCI	AATT	5 cut(s)	432, 524, 741, 1392, 1539
MmeI	TCCRAC	2 cut(s)	1118, 1199
Mph1103I	ATGCAT	1 cut(s)	2133
MroNI	GCCGGC	1 cut(s)	182
MroXI	GAANNNNTTC	1 cut(s)	1956
MseI	TTAA	6 cut(s)	468, 1203, 1439, 1797, 1880, 2136
MslI	CAYNNNNRTG	6 cut(s)	254, 362, 680, 924, 1115, 1988
MspI	CCGG	4 cut(s)	183, 590, 1040, 1076
MspR9I	CCNGG	4 cut(s)	954, 1041, 1077, 1225
Mva1269I	GAATGC	1 cut(s)	1448
MvaI	CCWGG	2 cut(s)	954, 1225
MvnI	CGCG	1 cut(s)	1386
MwoI	GCNNNNNNNGC	9 cut(s)	157, 321, 802, 849, 939, 1141, 1832, 1841, 1891
NaeI	GCCGGC	1 cut(s)	184
NciI	CCSGG	2 cut(s)	1041, 1077
NdeI	CATATG	4 cut(s)	566, 1513, 1549, 1601
NgoMIV	GCCGGC	1 cut(s)	182
NheI	GCTAGC	2 cut(s)	644, 796
NlaIV	GGNNCC	3 cut(s)	607, 1179, 1650
NmuCI	GTSAC	3 cut(s)	730, 1432, 1723
NsiI	ATGCAT	1 cut(s)	2133
OliI	CACNNNNGTG	1 cut(s)	1988
PagI	TCATGA	2 cut(s)	126, 1695
PceI	AGGCCT	1 cut(s)	2008
PciSI	GCTCTTC	2 cut(s)	872, 1003
PcsI	WCGNNNNNNNCGW	1 cut(s)	985
PctI	GAATGC	1 cut(s)	1448
PdiI	GCCGGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	1956
PfeI	GAWTC	8 cut(s)	5, 51, 168, 990, 1032, 1046, 1486, 2023
PkrI	GCNGC	6 cut(s)	162, 493, 1137, 1279, 1828, 1843
Ple19I	CGATCG	1 cut(s)	1749
Ppu21I	YACGTR	1 cut(s)	450
PpuMI	RGGWCCY	2 cut(s)	371, 1289
PsiI	TTATAA	2 cut(s)	303, 1932
Psp124BI	GAGCTC	2 cut(s)	402, 867
Psp5II	RGGWCCY	2 cut(s)	371, 1289
Psp6I	CCWGG	2 cut(s)	952, 1223
PspGI	CCWGG	2 cut(s)	952, 1223
PspN4I	GGNNCC	3 cut(s)	607, 1179, 1650
PspPI	GGNCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
PspPPI	RGGWCCY	2 cut(s)	371, 1289
PvuI	CGATCG	1 cut(s)	1749
RsaI	GTAC	4 cut(s)	63, 193, 452, 656
RsaNI	GTAC	4 cut(s)	62, 192, 451, 655
RseI	CAYNNNNRTG	6 cut(s)	254, 362, 680, 924, 1115, 1988
SacI	GAGCTC	2 cut(s)	402, 867
SapI	GCTCTTC	2 cut(s)	872, 1003
SaqAI	TTAA	6 cut(s)	468, 1203, 1439, 1797, 1880, 2136
SatI	GCNGC	6 cut(s)	161, 492, 1136, 1278, 1827, 1842
Sau96I	GGNCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
ScrFI	CCNGG	4 cut(s)	954, 1041, 1077, 1225
SduI	GDGCHC	5 cut(s)	402, 690, 867, 1015, 1267
SfaNI	GCATC	5 cut(s)	120, 545, 657, 1153, 1294
SinI	GGWCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
SmiMI	CAYNNNNRTG	6 cut(s)	254, 362, 680, 924, 1115, 1988
SmlI	CTYRAG	2 cut(s)	187, 2015
SmoI	CTYRAG	2 cut(s)	187, 2015
Sse9I	AATT	5 cut(s)	432, 524, 741, 1392, 1539
SseBI	AGGCCT	1 cut(s)	2008
SsiI	CCGC	6 cut(s)	489, 492, 788, 1353, 1384, 1826
SspI	AATATT	1 cut(s)	2050
SspMI	CTAG	8 cut(s)	548, 645, 797, 1052, 1122, 1478, 1836, 2064
SstI	GAGCTC	2 cut(s)	402, 867
StuI	AGGCCT	1 cut(s)	2008
StyD4I	CCNGG	4 cut(s)	952, 1039, 1075, 1223
StyI	CCWWGG	2 cut(s)	1872, 1913
TaaI	ACNGT	5 cut(s)	335, 464, 1156, 1169, 1968
TaiI	ACGT	2 cut(s)	452, 1018
TaqI	TCGA	3 cut(s)	166, 611, 1749
TaqII	GACCGA	1 cut(s)	2086
TasI	AATT	5 cut(s)	432, 524, 741, 1392, 1539
TauI	GCSGC	2 cut(s)	494, 1829
TfiI	GAWTC	8 cut(s)	5, 51, 168, 990, 1032, 1046, 1486, 2023
Tru1I	TTAA	6 cut(s)	468, 1203, 1439, 1797, 1880, 2136
Tru9I	TTAA	6 cut(s)	468, 1203, 1439, 1797, 1880, 2136
TscAI	CASTG	4 cut(s)	322, 1159, 1198, 1664
TseFI	GTSAC	3 cut(s)	730, 1432, 1723
TseI	GCWGC	4 cut(s)	160, 1135, 1277, 1841
Tsp45I	GTSAC	3 cut(s)	730, 1432, 1723
TspGWI	ACGGA	2 cut(s)	27, 79
TspRI	CASTG	4 cut(s)	322, 1159, 1198, 1664
VpaK11BI	GGWCC	6 cut(s)	371, 1221, 1289, 1298, 1649, 2069
XapI	RAATTY	1 cut(s)	741
XbaI	TCTAGA	1 cut(s)	1051
XmiI	GTMKAC	1 cut(s)	1499
XmnI	GAANNNNTTC	1 cut(s)	1956
XspI	CTAG	8 cut(s)	548, 645, 797, 1052, 1122, 1478, 1836, 2064
Zsp2I	ATGCAT	1 cut(s)	2133

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.