Rh1BG234300

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
35718318 .. 35722524
4207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG234300.1

Sequence Viewer

Length: 1329 bp
ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAATGGTACGGACAGCTATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGATCTATGTCATGATGCCCACAAACACATATAGGCAAATATGGCTGCCTCGAATCCGAGCTGAGGCCGGCTCAAGTACCTATTTTGGAGCGCAAGGTTCAACTCTTCTGTTTTACACATTTCCCATTATGTTCATTGCTGTGATGGGTTGTGTGTATCTCTATCTGGGAAAGAAGATTAATGATTATAAAATGGAAAGTGATGGCAAAACGAACCGTATAGCTGTGTGGAAACAGCCCATGCTGGTGAAAGGTCCTTTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTCATTGCACTCCTAATTTGGTCTATCTCCACGTACTTGACCAACGGTTTTAAGATAATCACACCACAATCCGCGGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGAGAGTGCATCATTGAGGCTAGGGGTTGTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTCTCTCGTGGCTCCTCGATCTTGCCTCTGTTTGGCCTCACCTCCGAGGCTAGCATCAAGTACCATATATGGGTAGGAAACATACTAATGGTGCTCTTTACAGCTCATGGAACTTGTTACATCATATATTGGGCTGTCACAGATCAAATTTCCCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCGGGAGAGCTAGCTTTGCTCTCTGGACTTGCCCTGTGGGTGGCTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCCGTTCATGGTCTTCTTCATCTTTCATGTCGGTGTCGGCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCATGGTTGATCGTTACCTACGATTCTTGCAATCCGAGAGAAGAGCACGTTTAGTCTCTGCCCGAATCTTGCCGGGTGAATCTCTAGAACTCAACTTTGCCAAAAGTCCGGGTTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTACACTGTTACTTCAAACAGTAACTTGGAGCCAGAGAAGATCAGTGTCGTCATTAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCGTCGCCTTCTACAAGTGCTCGGATTGAGGCTGCTGTTGAAGGACCTTATGGACCTGATGCAAGTCATTTTCTAAGGTTAGTGAGATAA

Protein Analysis

442

Amino Acids

49.81

Weight (kDa)

9.71

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 182 - 302 1.7e-20 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 336 - 433 1.9e-23 FAD-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AccII CGCG 1 cut(s) 488
AciI CCGC 3 cut(s) 486, 488, 782
AcsI RAATTY 1 cut(s) 735
AfaI GTAC 4 cut(s) 63, 193, 449, 650
AfiI CCNNNNNNNGG 6 cut(s) 178, 620, 658, 820, 895, 964
AgsI TTSAA 5 cut(s) 9, 216, 1078, 1158, 1280
AjnI CCWGG 2 cut(s) 946, 1217
Alw21I GWGCWC 5 cut(s) 399, 684, 861, 1009, 1261
Alw26I GTCTC 2 cut(s) 595, 1021
AoxI GGCC 2 cut(s) 180, 622
ApeKI GCWGC 3 cut(s) 160, 1129, 1271
ApoI RAATTY 1 cut(s) 735
AseI ATTAAT 1 cut(s) 294
AspLEI GCGC 2 cut(s) 208, 846
AspS9I GGNCC 4 cut(s) 368, 1215, 1283, 1292
AsuC2I CCSGG 2 cut(s) 1035, 1071
AsuHPI GGTGA 6 cut(s) 24, 373, 391, 619, 1049, 1214
AsuNHI GCTAGC 2 cut(s) 638, 790
AvaII GGWCC 4 cut(s) 368, 1215, 1283, 1292
BanII GRGCYC 2 cut(s) 399, 861
BauI CACGAG 1 cut(s) 594
BbsI GAAGAC 1 cut(s) 892
Bbv12I GWGCWC 5 cut(s) 399, 684, 861, 1009, 1261
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 3 cut(s) 147, 1116, 1258
BccI CCATC 2 cut(s) 253, 311
BciT130I CCWGG 2 cut(s) 948, 1219
BcnI CCSGG 2 cut(s) 1035, 1071
BcoDI GTCTC 2 cut(s) 595, 1021
BfaI CTAG 5 cut(s) 545, 639, 791, 1046, 1116
BisI GCNGC 4 cut(s) 161, 489, 1130, 1272
BlsI GCNGC 4 cut(s) 162, 490, 1131, 1273
Bme1390I CCNGG 4 cut(s) 948, 1035, 1071, 1219
Bme18I GGWCC 4 cut(s) 368, 1215, 1283, 1292
BmgT120I GGNCC 4 cut(s) 368, 1215, 1283, 1292
BmiI GGNNCC 2 cut(s) 601, 1173
BmrFI CCNGG 4 cut(s) 948, 1035, 1071, 1219
BmsI GCATC 5 cut(s) 120, 542, 651, 1147, 1288
BmtI GCTAGC 2 cut(s) 642, 794
BpiI GAAGAC 1 cut(s) 892
BplI GAGNNNNNCTC 2 cut(s) 170, 202
Bpu10I CCTNAGC 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 172
BpuMI CCSGG 2 cut(s) 1035, 1071
BsaAI YACGTR 1 cut(s) 447
BsaI GGTCTC 1 cut(s) 595
BsaJI CCNNGG 3 cut(s) 486, 633, 946
BsaWI WCCGGW 1 cut(s) 586
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 6 cut(s) 178, 620, 658, 820, 895, 964
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 1 cut(s) 769
Bse3DI GCAATG 3 cut(s) 249, 417, 1139
BseBI CCWGG 2 cut(s) 948, 1219
BseDI CCNNGG 3 cut(s) 486, 633, 946
BseGI GGATG 2 cut(s) 885, 1138
BseLI CCNNNNNNNGG 6 cut(s) 178, 620, 658, 820, 895, 964
BseMI GCAATG 3 cut(s) 249, 417, 1139
BseMII CTCAG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 769
BseRI GAGGAG 1 cut(s) 592
BseXI GCAGC 3 cut(s) 147, 1116, 1258
Bsh1236I CGCG 1 cut(s) 488
BshFI GGCC 2 cut(s) 182, 624
BsiHKAI GWGCWC 5 cut(s) 399, 684, 861, 1009, 1261
BsiSI CCGG 4 cut(s) 183, 587, 1034, 1070
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 6 cut(s) 178, 620, 658, 820, 895, 964
BsmAI GTCTC 2 cut(s) 595, 1021
BsmFI GGGAC 1 cut(s) 25
BsnI GGCC 2 cut(s) 182, 624
Bso31I GGTCTC 1 cut(s) 595
Bsp1286I GDGCHC 5 cut(s) 399, 684, 861, 1009, 1261
Bsp143I GATC 5 cut(s) 117, 606, 730, 970, 1182
BspACI CCGC 3 cut(s) 486, 488, 782
BspANI GGCC 2 cut(s) 182, 624
BspCNI CTCAG 1 cut(s) 169
BspFNI CGCG 1 cut(s) 488
BspHI TCATGA 1 cut(s) 126
BspLI GGNNCC 2 cut(s) 601, 1173
BspOI GCTAGC 2 cut(s) 642, 794
BspQI GCTCTTC 2 cut(s) 866, 997
BspTNI GGTCTC 1 cut(s) 595
BsrDI GCAATG 3 cut(s) 249, 417, 1139
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 1 cut(s) 769
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 3 cut(s) 486, 633, 946
BssMI GATC 5 cut(s) 117, 606, 730, 970, 1182
BssSI CACGAG 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 594
Bst2UI CCWGG 2 cut(s) 948, 1219
Bst4CI ACNGT 4 cut(s) 332, 461, 1150, 1163
Bst6I CTCTTC 5 cut(s) 225, 584, 866, 965, 997
BstBAI YACGTR 1 cut(s) 447
BstC8I GCNNGC 4 cut(s) 184, 640, 792, 934
BstDEI CTNAG 3 cut(s) 85, 177, 1313
BstDSI CCRYGG 1 cut(s) 486
BstF5I GGATG 2 cut(s) 885, 1138
BstFNI CGCG 1 cut(s) 488
BstHHI GCGC 2 cut(s) 208, 846
BstKTI GATC 5 cut(s) 120, 609, 733, 973, 1185
BstMAI GTCTC 2 cut(s) 595, 1021
BstMBI GATC 5 cut(s) 117, 606, 730, 970, 1182
BstMWI GCNNNNNNNGC 5 cut(s) 157, 796, 843, 933, 1135
BstNI CCWGG 2 cut(s) 948, 1219
BstSCI CCNGG 4 cut(s) 946, 1033, 1069, 1217
BstUI CGCG 1 cut(s) 488
BstV1I GCAGC 3 cut(s) 147, 1116, 1258
BstV2I GAAGAC 1 cut(s) 892
BsuRI GGCC 2 cut(s) 182, 624
BtgI CCRYGG 1 cut(s) 486
BtsCI GGATG 2 cut(s) 885, 1138
BtsIMutI CAGTG 2 cut(s) 1146, 1192
Cac8I GCNNGC 4 cut(s) 184, 640, 792, 934
CciI TCATGA 1 cut(s) 126
CfoI GCGC 2 cut(s) 208, 846
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 4 cut(s) 368, 1215, 1283, 1292
Cfr42I CCGCGG 1 cut(s) 489
CseI GACGC 1 cut(s) 1084
Csp6I GTAC 4 cut(s) 62, 192, 448, 649
CspCI CAANNNNNGTGG 1 cut(s) 32
CviQI GTAC 4 cut(s) 62, 192, 448, 649
DdeI CTNAG 3 cut(s) 85, 177, 1313
DpnI GATC 5 cut(s) 119, 608, 732, 972, 1184
DpnII GATC 5 cut(s) 117, 606, 730, 970, 1182
Eam1104I CTCTTC 5 cut(s) 225, 584, 866, 965, 997
EarI CTCTTC 5 cut(s) 225, 584, 866, 965, 997
Ecl136II GAGCTC 2 cut(s) 397, 859
Eco24I GRGCYC 2 cut(s) 399, 861
Eco31I GGTCTC 1 cut(s) 595
Eco47I GGWCC 4 cut(s) 368, 1215, 1283, 1292
Eco53kI GAGCTC 2 cut(s) 397, 859
EcoICRI GAGCTC 2 cut(s) 397, 859
EcoO109I RGGNCCY 2 cut(s) 368, 1283
EcoRII CCWGG 2 cut(s) 946, 1217
EcoT38I GRGCYC 2 cut(s) 399, 861
FaqI GGGAC 1 cut(s) 25
FauI CCCGC 1 cut(s) 775
FauNDI CATATG 1 cut(s) 563
Fnu4HI GCNGC 4 cut(s) 161, 489, 1130, 1272
FokI GGATG 2 cut(s) 872, 1125
FriOI GRGCYC 2 cut(s) 399, 861
Fsp4HI GCNGC 4 cut(s) 161, 489, 1130, 1272
FspBI CTAG 5 cut(s) 545, 639, 791, 1046, 1116
GlaI GCGC 2 cut(s) 207, 845
GluI GCNGC 4 cut(s) 161, 489, 1130, 1272
HaeIII GGCC 2 cut(s) 182, 624
HapII CCGG 4 cut(s) 183, 587, 1034, 1070
HgaI GACGC 1 cut(s) 1084
HhaI GCGC 2 cut(s) 208, 846
Hin6I GCGC 2 cut(s) 206, 844
HinP1I GCGC 2 cut(s) 206, 844
HindIII AAGCTT 1 cut(s) 1223
HinfI GANTC 6 cut(s) 5, 51, 168, 984, 1026, 1040
HpaII CCGG 4 cut(s) 183, 587, 1034, 1070
HphI GGTGA 6 cut(s) 24, 373, 391, 619, 1049, 1214
Hpy188I TCNGA 6 cut(s) 23, 56, 173, 634, 997, 1263
Hpy188III TCNNGA 3 cut(s) 127, 804, 1046
Hpy99I CGWCG 1 cut(s) 1246
HpyAV CCTTC 5 cut(s) 41, 412, 1199, 1257, 1274
HpyCH4III ACNGT 4 cut(s) 332, 461, 1150, 1163
HpyCH4IV ACGT 2 cut(s) 446, 1009
HpyCH4V TGCA 6 cut(s) 422, 533, 572, 991, 1132, 1301
HpyF10VI GCNNNNNNNGC 5 cut(s) 157, 796, 843, 933, 1135
HpyF3I CTNAG 3 cut(s) 85, 177, 1313
HpySE526I ACGT 2 cut(s) 446, 1009
HspAI GCGC 2 cut(s) 206, 844
KroI GCCGGC 1 cut(s) 182
KroNI GCCGGC 1 cut(s) 184
KspI CCGCGG 1 cut(s) 489
Kzo9I GATC 5 cut(s) 117, 606, 730, 970, 1182
LguI GCTCTTC 2 cut(s) 866, 997
LmnI GCTCC 4 cut(s) 203, 605, 948, 1171
Lsp1109I GCAGC 3 cut(s) 147, 1116, 1258
LweI GCATC 5 cut(s) 120, 542, 651, 1147, 1288
MaeI CTAG 5 cut(s) 545, 639, 791, 1046, 1116
MaeII ACGT 2 cut(s) 446, 1009
MaeIII GTNAC 6 cut(s) 557, 704, 724, 974, 1150, 1163
MalI GATC 5 cut(s) 119, 608, 732, 972, 1184
MboI GATC 5 cut(s) 117, 606, 730, 970, 1182
MhlI GDGCHC 5 cut(s) 399, 684, 861, 1009, 1261
MluCI AATT 3 cut(s) 429, 521, 735
MmeI TCCRAC 2 cut(s) 1112, 1193
MroNI GCCGGC 1 cut(s) 182
MseI TTAA 3 cut(s) 294, 465, 1197
MslI CAYNNNNRTG 5 cut(s) 254, 359, 674, 918, 1109
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 4 cut(s) 183, 587, 1034, 1070
MspR9I CCNGG 4 cut(s) 948, 1035, 1071, 1219
MvaI CCWGG 2 cut(s) 948, 1219
MvnI CGCG 1 cut(s) 488
MwoI GCNNNNNNNGC 5 cut(s) 157, 796, 843, 933, 1135
NaeI GCCGGC 1 cut(s) 184
NciI CCSGG 2 cut(s) 1035, 1071
NdeI CATATG 1 cut(s) 563
NdeII GATC 5 cut(s) 117, 606, 730, 970, 1182
NgoMIV GCCGGC 1 cut(s) 182
NheI GCTAGC 2 cut(s) 638, 790
NlaIV GGNNCC 2 cut(s) 601, 1173
NmuCI GTSAC 1 cut(s) 724
PagI TCATGA 1 cut(s) 126
PciSI GCTCTTC 2 cut(s) 866, 997
PcsI WCGNNNNNNNCGW 1 cut(s) 979
PdiI GCCGGC 1 cut(s) 184
PfeI GAWTC 6 cut(s) 5, 51, 168, 984, 1026, 1040
PkrI GCNGC 4 cut(s) 162, 490, 1131, 1273
Ppu21I YACGTR 1 cut(s) 447
PpuMI RGGWCCY 2 cut(s) 368, 1283
PshBI ATTAAT 1 cut(s) 294
PsiI TTATAA 1 cut(s) 303
Psp124BI GAGCTC 2 cut(s) 399, 861
Psp5II RGGWCCY 2 cut(s) 368, 1283
Psp6I CCWGG 2 cut(s) 946, 1217
PspGI CCWGG 2 cut(s) 946, 1217
PspN4I GGNNCC 2 cut(s) 601, 1173
PspPI GGNCC 4 cut(s) 368, 1215, 1283, 1292
PspPPI RGGWCCY 2 cut(s) 368, 1283
RsaI GTAC 4 cut(s) 63, 193, 449, 650
RsaNI GTAC 4 cut(s) 62, 192, 448, 649
RseI CAYNNNNRTG 5 cut(s) 254, 359, 674, 918, 1109
SacI GAGCTC 2 cut(s) 399, 861
SacII CCGCGG 1 cut(s) 489
SapI GCTCTTC 2 cut(s) 866, 997
SaqAI TTAA 3 cut(s) 294, 465, 1197
SatI GCNGC 4 cut(s) 161, 489, 1130, 1272
Sau3AI GATC 5 cut(s) 117, 606, 730, 970, 1182
Sau96I GGNCC 4 cut(s) 368, 1215, 1283, 1292
ScrFI CCNGG 4 cut(s) 948, 1035, 1071, 1219
SduI GDGCHC 5 cut(s) 399, 684, 861, 1009, 1261
SfaNI GCATC 5 cut(s) 120, 542, 651, 1147, 1288
Sfr303I CCGCGG 1 cut(s) 489
SgrBI CCGCGG 1 cut(s) 489
SinI GGWCC 4 cut(s) 368, 1215, 1283, 1292
SmiMI CAYNNNNRTG 5 cut(s) 254, 359, 674, 918, 1109
SmlI CTYRAG 1 cut(s) 187
SmoI CTYRAG 1 cut(s) 187
Sse9I AATT 3 cut(s) 429, 521, 735
SsiI CCGC 3 cut(s) 486, 488, 782
SspMI CTAG 5 cut(s) 545, 639, 791, 1046, 1116
SstI GAGCTC 2 cut(s) 399, 861
StyD4I CCNGG 4 cut(s) 946, 1033, 1069, 1217
TaaI ACNGT 4 cut(s) 332, 461, 1150, 1163
TaiI ACGT 2 cut(s) 449, 1012
TaqI TCGA 2 cut(s) 166, 605
TasI AATT 3 cut(s) 429, 521, 735
TauI GCSGC 1 cut(s) 491
TfiI GAWTC 6 cut(s) 5, 51, 168, 984, 1026, 1040
Tru1I TTAA 3 cut(s) 294, 465, 1197
Tru9I TTAA 3 cut(s) 294, 465, 1197
TscAI CASTG 2 cut(s) 1153, 1192
TseFI GTSAC 1 cut(s) 724
TseI GCWGC 3 cut(s) 160, 1129, 1271
Tsp45I GTSAC 1 cut(s) 724
TspGWI ACGGA 2 cut(s) 27, 79
TspRI CASTG 2 cut(s) 1153, 1192
VpaK11BI GGWCC 4 cut(s) 368, 1215, 1283, 1292
VspI ATTAAT 1 cut(s) 294
XapI RAATTY 1 cut(s) 735
XbaI TCTAGA 1 cut(s) 1045
XspI CTAG 5 cut(s) 545, 639, 791, 1046, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.