Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49371533 .. 49375707

Gene Structure 4175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG267000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACTGACAGCGATAAAGCTGTTCTTGGTGTTGGTGGTGTTTGGAGGATGTGTTTTGCTCTATGTCGTGATGCCCACAAACACATATAAGCAGATATGGCAGCCTCGAATCCGAGCCAAGGCCAACTCAAGTACCTATTTTGGATCACAAGGTGCAAATCTTCTGGTATTCACATTTCCCATTATGTTGATTGCTGTGATGGGTTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATGGAAACCAGTGAAGGCAAAACGAACCGTTTCGCTATGTGGAAACAGCCCATGCTGGTGAAAGGTCCTCTTGGCATTGTTTCTGGTATAGAGCTCACCTTCTTCATCATGTTCATTGCACTACTAATTTGGTCAATCTCCGCGTACTTGACCAACGGTTTTAACAAAATCACACCACAATCCGCGGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGAGAGTGCATCATTGAGGCTAGGACTTGTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTCGCTCGTGGCTCGTCAATATTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAACATAGTCATGGTGCTCTTCACCGCTCACGGAATTTGTTACATCATCTATTGGGCTGTTACAGATCAGATTTTCCAGATGATAAAATGGGAGAAAACTGACATATCAAACGTAGCTGGAGAGCTATCTTTGCTCTCTGGACTTGCAATGTGGGTGACTACAATTCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCCCTTCATGGTCTTCTTCATTTTTCATGTCGGCGTCTCCTATGCTGGCATTATGATCCCCGGCTTCTTCCTCTTCGTGGTTGATCGTTACCTACGATTCTTGCAATCCGGAAGAAGAGCACGTTTAGTCTCTGCCCGAGTATTGCCGGGCGAATCTCTAGAACTCAACTTCGCCAAGAGTCCCGGATTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTAACTTCAAACAGTAATTTGGAGCTAGAGAAGATCAGTGTCGTCATTAAAGGTGAAGGTAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCGTCGCCTTCTACAAGTGATCGGATTGAGGCTGCTGTTGAAGGGCCTTATGGACCTGCTGCAACTCATTTTCTAAGGCATGACACCCTAGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCTATAATCCGCGAGCTAATTTTTATGTCCAAGGCCTACCAATGCAAGCTTCCGAAAGTAACCTTAATCTGTGCATTCAAACACTCTTCGGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATATCCAATCTCCAGATAAAAATTGAGGCATATGTGACAAGAGAGAAATTTAAAGATAACTCTATGAACCTCAGAGCCACATGGTTTAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGTGCAAATCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCTTGATGTTCCTCATCTTGATTGGGATCATCACCCGATACTACATTTATCCGATAGATCACAATTCCAATAAGATTTTTTCGTTTCCTTTGAGAGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCTAAGGAGTTAAAGCAGGTTCAGCACATAGAAGCCTCATTACCAAGGGTTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAACCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTATTTGAGTGCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGGCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

717

Amino Acids

80.62

Weight (kDa)

9.51

Isoelectric Point (pI)

38.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	183 - 303	4.1e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	338 - 434	8.7e-23	FAD-binding domain
NAD_binding_6	PF08030	441 - 700	2e-20	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1926
Acc36I	ACCTGC	2 cut(s)	1306, 1870
AccBSI	CCGCTC	1 cut(s)	695
AccI	GTMKAC	1 cut(s)	1496
AccII	CGCG	3 cut(s)	449, 491, 1383
AccIII	TCCGGA	1 cut(s)	998
AciI	CCGC	5 cut(s)	447, 489, 491, 693, 1381
AclWI	GGATC	4 cut(s)	211, 940, 1721, 2044
AcsI	RAATTY	2 cut(s)	702, 1562
AcyI	GRCGYC	1 cut(s)	924
AdeI	CACNNNGTG	1 cut(s)	212
AfaI	GTAC	4 cut(s)	63, 193, 452, 653
AfiI	CCNNNNNNNGG	5 cut(s)	178, 623, 898, 967, 1336
AgsI	TTSAA	6 cut(s)	9, 295, 1081, 1161, 1283, 1450
AjnI	CCWGG	1 cut(s)	1220
AjuI	GAANNNNNNNTTGG	2 cut(s)	1404, 1436
AleI	CACNNNNGTG	1 cut(s)	1331
Alw21I	GWGCWC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
Alw26I	GTCTC	3 cut(s)	931, 1024, 1968
Alw44I	GTGCAC	1 cut(s)	1985
AlwI	GGATC	4 cut(s)	211, 940, 1721, 2044
Ama87I	CYCGRG	1 cut(s)	1026
Aor13HI	TCCGGA	1 cut(s)	998
AoxI	GGCC	5 cut(s)	180, 625, 1286, 1404, 1666
ApaLI	GTGCAC	1 cut(s)	1985
ApeKI	GCWGC	6 cut(s)	160, 1132, 1274, 1301, 1820, 1835
ApoI	RAATTY	2 cut(s)	702, 1562
Asp700I	GAANNNNTTC	2 cut(s)	335, 1950
AspLEI	GCGC	1 cut(s)	849
AspS9I	GGNCC	6 cut(s)	371, 1218, 1286, 1295, 1462, 2063
AsuC2I	CCSGG	3 cut(s)	951, 1038, 1074
AsuHPI	GGTGA	9 cut(s)	24, 376, 394, 622, 682, 835, 1217, 1351, 1711
AsuNHI	GCTAGC	1 cut(s)	641
AvaI	CYCGRG	1 cut(s)	1026
AvaII	GGWCC	5 cut(s)	371, 1218, 1295, 1462, 2063
BaeGI	GKGCMC	1 cut(s)	1989
BaeI	ACNNNNGTAYC	2 cut(s)	175, 208
BanII	GRGCYC	3 cut(s)	402, 864, 1786
BarI	GAAGNNNNNNTAC	2 cut(s)	1887, 1919
BauI	CACGAG	1 cut(s)	597
BbsI	GAAGAC	1 cut(s)	895
Bbv12I	GWGCWC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
BbvI	GCAGC	6 cut(s)	172, 1119, 1261, 1288, 1807, 1847
BccI	CCATC	3 cut(s)	253, 285, 2144
BciT130I	CCWGG	1 cut(s)	1222
BcnI	CCSGG	3 cut(s)	951, 1038, 1074
BcoDI	GTCTC	3 cut(s)	931, 1024, 1968
BfuAI	ACCTGC	2 cut(s)	1306, 1870
BisI	GCNGC	7 cut(s)	161, 492, 1133, 1275, 1302, 1821, 1836
BlsI	GCNGC	7 cut(s)	162, 493, 1134, 1276, 1303, 1822, 1837
Bme1390I	CCNGG	4 cut(s)	951, 1038, 1074, 1222
Bme18I	GGWCC	5 cut(s)	371, 1218, 1295, 1462, 2063
BmeT110I	CYCGRG	1 cut(s)	1026
BmgT120I	GGNCC	6 cut(s)	371, 1218, 1286, 1295, 1462, 2063
BmrFI	CCNGG	4 cut(s)	951, 1038, 1074, 1222
BmsI	GCATC	5 cut(s)	120, 545, 654, 1150, 1688
BmtI	GCTAGC	1 cut(s)	645
BpiI	GAAGAC	1 cut(s)	895
BpmI	CTGGAG	2 cut(s)	807, 1511
Bpu10I	CCTNAGC	1 cut(s)	1866
BpuEI	CTTGAG	2 cut(s)	172, 1994
BpuMI	CCSGG	3 cut(s)	951, 1038, 1074
BsaBI	GATNNNNATC	1 cut(s)	1712
BsaHI	GRCGYC	1 cut(s)	924
BsaJI	CCNNGG	5 cut(s)	177, 489, 949, 1401, 1907
BsaWI	WCCGGW	2 cut(s)	589, 998
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	5 cut(s)	178, 623, 898, 967, 1336
Bse1I	ACTGG	2 cut(s)	315, 1658
Bse3DI	GCAATG	3 cut(s)	420, 822, 1142
Bse8I	GATNNNNATC	1 cut(s)	1712
BseAI	TCCGGA	1 cut(s)	998
BseBI	CCWGG	1 cut(s)	1222
BseDI	CCNNGG	5 cut(s)	177, 489, 949, 1401, 1907
BseGI	GGATG	3 cut(s)	113, 888, 1141
BseJI	GATNNNNATC	1 cut(s)	1712
BseLI	CCNNNNNNNGG	5 cut(s)	178, 623, 898, 967, 1336
BseMI	GCAATG	3 cut(s)	420, 822, 1142
BseMII	CTCAG	2 cut(s)	627, 1600
BseNI	ACTGG	2 cut(s)	315, 1658
BseSI	GKGCMC	1 cut(s)	1989
BseXI	GCAGC	6 cut(s)	172, 1119, 1261, 1288, 1807, 1847
BsgI	GTGCAG	1 cut(s)	1854
Bsh1236I	CGCG	3 cut(s)	449, 491, 1383
Bsh1285I	CGRYCG	1 cut(s)	594
BshFI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1668
BsiEI	CGRYCG	1 cut(s)	594
BsiHKAI	GWGCWC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
BsiHKCI	CYCGRG	1 cut(s)	1026
BsiSI	CCGG	5 cut(s)	590, 951, 999, 1037, 1074
BslFI	GGGAC	2 cut(s)	25, 1056
BslI	CCNNNNNNNGG	5 cut(s)	178, 623, 898, 967, 1336
BsmAI	GTCTC	3 cut(s)	931, 1024, 1968
BsmBI	CGTCTC	1 cut(s)	931
BsmFI	GGGAC	2 cut(s)	25, 1056
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1668
BsoBI	CYCGRG	1 cut(s)	1026
Bsp1286I	GDGCHC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
Bsp13I	TCCGGA	1 cut(s)	998
Bsp143I	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
BspACI	CCGC	5 cut(s)	447, 489, 491, 693, 1381
BspANI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1668
BspCNI	CTCAG	2 cut(s)	628, 1599
BspEI	TCCGGA	1 cut(s)	998
BspFNI	CGCG	3 cut(s)	449, 491, 1383
BspMI	ACCTGC	2 cut(s)	1306, 1870
BspOI	GCTAGC	1 cut(s)	645
BspPI	GGATC	4 cut(s)	211, 940, 1721, 2044
BspQI	GCTCTTC	3 cut(s)	692, 869, 1000
BsrBI	CCGCTC	1 cut(s)	695
BsrDI	GCAATG	3 cut(s)	420, 822, 1142
BsrI	ACTGG	2 cut(s)	315, 1658
BssECI	CCNNGG	5 cut(s)	177, 489, 949, 1401, 1907
BssMI	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
BssNI	GRCGYC	1 cut(s)	924
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	3 cut(s)	177, 1401, 1907
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	1 cut(s)	1222
Bst4CI	ACNGT	5 cut(s)	335, 464, 1153, 1166, 1962
Bst6I	CTCTTC	6 cut(s)	587, 692, 869, 968, 1000, 1462
BstACI	GRCGYC	1 cut(s)	924
BstC8I	GCNNGC	4 cut(s)	643, 937, 1385, 1418
BstDEI	CTNAG	4 cut(s)	636, 1316, 1586, 1866
BstDSI	CCRYGG	1 cut(s)	489
BstF5I	GGATG	3 cut(s)	113, 888, 1141
BstFNI	CGCG	3 cut(s)	449, 491, 1383
BstHHI	GCGC	1 cut(s)	849
BstKTI	GATC	9 cut(s)	206, 736, 948, 976, 1188, 1264, 1716, 1747, 2039
BstMAI	GTCTC	3 cut(s)	931, 1024, 1968
BstMBI	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
BstMCI	CGRYCG	1 cut(s)	594
BstMWI	GCNNNNNNNGC	7 cut(s)	157, 799, 846, 1138, 1826, 1835, 1885
BstNI	CCWGG	1 cut(s)	1222
BstSCI	CCNGG	4 cut(s)	949, 1036, 1072, 1220
BstSLI	GKGCMC	1 cut(s)	1989
BstUI	CGCG	3 cut(s)	449, 491, 1383
BstV1I	GCAGC	6 cut(s)	172, 1119, 1261, 1288, 1807, 1847
BstV2I	GAAGAC	1 cut(s)	895
BsuRI	GGCC	5 cut(s)	182, 627, 1288, 1406, 1668
BtgI	CCRYGG	1 cut(s)	489
BtsCI	GGATG	3 cut(s)	113, 888, 1141
BtsI	GCAGTG	2 cut(s)	1357, 1845
BtsIMutI	CAGTG	6 cut(s)	322, 1149, 1195, 1357, 1651, 1845
BveI	ACCTGC	2 cut(s)	1306, 1870
Cac8I	GCNNGC	4 cut(s)	643, 937, 1385, 1418
CfoI	GCGC	1 cut(s)	849
Cfr13I	GGNCC	6 cut(s)	371, 1218, 1286, 1295, 1462, 2063
Cfr42I	CCGCGG	1 cut(s)	492
CseI	GACGC	2 cut(s)	913, 1087
Csp6I	GTAC	4 cut(s)	62, 192, 451, 652
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 451, 652
DdeI	CTNAG	4 cut(s)	636, 1316, 1586, 1866
DpnI	GATC	9 cut(s)	205, 735, 947, 975, 1187, 1263, 1715, 1746, 2038
DpnII	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
DraI	TTTAAA	2 cut(s)	1567, 1603
DraIII	CACNNNGTG	1 cut(s)	212
Eam1104I	CTCTTC	6 cut(s)	587, 692, 869, 968, 1000, 1462
EarI	CTCTTC	6 cut(s)	587, 692, 869, 968, 1000, 1462
Ecl136II	GAGCTC	3 cut(s)	400, 862, 1784
Eco130I	CCWWGG	3 cut(s)	177, 1401, 1907
Eco147I	AGGCCT	1 cut(s)	1406
Eco24I	GRGCYC	3 cut(s)	402, 864, 1786
Eco47I	GGWCC	5 cut(s)	371, 1218, 1295, 1462, 2063
Eco53kI	GAGCTC	3 cut(s)	400, 862, 1784
Eco88I	CYCGRG	1 cut(s)	1026
EcoICRI	GAGCTC	3 cut(s)	400, 862, 1784
EcoO109I	RGGNCCY	2 cut(s)	371, 1286
EcoRII	CCWGG	1 cut(s)	1220
EcoT14I	CCWWGG	3 cut(s)	177, 1401, 1907
EcoT22I	ATGCAT	1 cut(s)	2127
EcoT38I	GRGCYC	3 cut(s)	402, 864, 1786
ErhI	CCWWGG	3 cut(s)	177, 1401, 1907
Esp3I	CGTCTC	1 cut(s)	931
FalI	AAGNNNNNCTT	4 cut(s)	68, 100, 360, 392
FaqI	GGGAC	2 cut(s)	25, 1056
FauNDI	CATATG	3 cut(s)	566, 1510, 1546
FblI	GTMKAC	1 cut(s)	1496
Fnu4HI	GCNGC	7 cut(s)	161, 492, 1133, 1275, 1302, 1821, 1836
FokI	GGATG	3 cut(s)	120, 875, 1128
FriOI	GRGCYC	3 cut(s)	402, 864, 1786
Fsp4HI	GCNGC	7 cut(s)	161, 492, 1133, 1275, 1302, 1821, 1836
GlaI	GCGC	1 cut(s)	848
GluI	GCNGC	7 cut(s)	161, 492, 1133, 1275, 1302, 1821, 1836
GsuI	CTGGAG	2 cut(s)	807, 1511
HaeIII	GGCC	5 cut(s)	182, 627, 1288, 1406, 1668
HapII	CCGG	5 cut(s)	590, 951, 999, 1037, 1074
HgaI	GACGC	2 cut(s)	913, 1087
HhaI	GCGC	1 cut(s)	849
Hin1I	GRCGYC	1 cut(s)	924
Hin6I	GCGC	1 cut(s)	847
HinP1I	GCGC	1 cut(s)	847
HindIII	AAGCTT	2 cut(s)	1226, 1418
HinfI	GANTC	9 cut(s)	5, 51, 168, 987, 1043, 1069, 1483, 2017, 2132
HpaII	CCGG	5 cut(s)	590, 951, 999, 1037, 1074
HphI	GGTGA	9 cut(s)	24, 376, 394, 622, 682, 835, 1217, 1351, 1711
Hpy166II	GTNNAC	3 cut(s)	1497, 1987, 2063
Hpy188III	TCNNGA	9 cut(s)	127, 745, 807, 999, 1049, 1528, 1690, 1705, 2011
Hpy8I	GTNNAC	3 cut(s)	1497, 1987, 2063
Hpy99I	CGWCG	1 cut(s)	1249
HpyAV	CCTTC	9 cut(s)	41, 314, 415, 904, 1202, 1260, 1277, 1696, 1961
HpyCH4III	ACNGT	5 cut(s)	335, 464, 1153, 1166, 1962
HpyCH4IV	ACGT	2 cut(s)	780, 1012
HpyF10VI	GCNNNNNNNGC	7 cut(s)	157, 799, 846, 1138, 1826, 1835, 1885
HpyF3I	CTNAG	4 cut(s)	636, 1316, 1586, 1866
HpySE526I	ACGT	2 cut(s)	780, 1012
Hsp92I	GRCGYC	1 cut(s)	924
HspAI	GCGC	1 cut(s)	847
Kpn2I	TCCGGA	1 cut(s)	998
KspI	CCGCGG	1 cut(s)	492
Kzo9I	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
LguI	GCTCTTC	3 cut(s)	692, 869, 1000
LmnI	GCTCC	1 cut(s)	1174
Lsp1109I	GCAGC	6 cut(s)	172, 1119, 1261, 1288, 1807, 1847
LweI	GCATC	5 cut(s)	120, 545, 654, 1150, 1688
MaeII	ACGT	2 cut(s)	780, 1012
MaeIII	GTNAC	8 cut(s)	560, 707, 727, 823, 977, 1153, 1429, 1549
MalI	GATC	9 cut(s)	205, 735, 947, 975, 1187, 1263, 1715, 1746, 2038
MbiI	CCGCTC	1 cut(s)	695
MboI	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
MhlI	GDGCHC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
MluCI	AATT	9 cut(s)	432, 524, 702, 831, 1168, 1389, 1536, 1562, 1750
MlyI	GAGTC	2 cut(s)	1078, 2141
MmeI	TCCRAC	3 cut(s)	1115, 1196, 1923
Mph1103I	ATGCAT	1 cut(s)	2127
MroI	TCCGGA	1 cut(s)	998
MroXI	GAANNNNTTC	2 cut(s)	335, 1950
MseI	TTAA	7 cut(s)	468, 1200, 1436, 1566, 1602, 1791, 1874
MslI	CAYNNNNRTG	4 cut(s)	362, 677, 1112, 1331
MspA1I	CMGCKG	1 cut(s)	491
MspI	CCGG	5 cut(s)	590, 951, 999, 1037, 1074
MspR9I	CCNGG	4 cut(s)	951, 1038, 1074, 1222
MssI	GTTTAAAC	1 cut(s)	1603
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	1 cut(s)	1222
MvnI	CGCG	3 cut(s)	449, 491, 1383
MwoI	GCNNNNNNNGC	7 cut(s)	157, 799, 846, 1138, 1826, 1835, 1885
NciI	CCSGG	3 cut(s)	951, 1038, 1074
NdeI	CATATG	3 cut(s)	566, 1510, 1546
NdeII	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
NheI	GCTAGC	1 cut(s)	641
NmuCI	GTSAC	2 cut(s)	823, 1549
NsiI	ATGCAT	1 cut(s)	2127
OliI	CACNNNNGTG	1 cut(s)	1331
PceI	AGGCCT	1 cut(s)	1406
PciSI	GCTCTTC	3 cut(s)	692, 869, 1000
PcsI	WCGNNNNNNNCGW	1 cut(s)	982
PctI	GAATGC	1 cut(s)	1445
PdmI	GAANNNNTTC	2 cut(s)	335, 1950
PfeI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2017
PfoI	TCCNGGA	1 cut(s)	1072
PkrI	GCNGC	7 cut(s)	162, 493, 1134, 1276, 1303, 1822, 1837
PleI	GAGTC	2 cut(s)	1077, 2140
PmeI	GTTTAAAC	1 cut(s)	1603
PpsI	GAGTC	2 cut(s)	1077, 2140
PpuMI	RGGWCCY	1 cut(s)	371
PsiI	TTATAA	2 cut(s)	303, 1926
Psp124BI	GAGCTC	3 cut(s)	402, 864, 1786
Psp5II	RGGWCCY	1 cut(s)	371
Psp6I	CCWGG	1 cut(s)	1220
PspGI	CCWGG	1 cut(s)	1220
PspPI	GGNCC	6 cut(s)	371, 1218, 1286, 1295, 1462, 2063
PspPPI	RGGWCCY	1 cut(s)	371
RsaI	GTAC	4 cut(s)	63, 193, 452, 653
RsaNI	GTAC	4 cut(s)	62, 192, 451, 652
RseI	CAYNNNNRTG	4 cut(s)	362, 677, 1112, 1331
SacI	GAGCTC	3 cut(s)	402, 864, 1786
SacII	CCGCGG	1 cut(s)	492
SapI	GCTCTTC	3 cut(s)	692, 869, 1000
SaqAI	TTAA	7 cut(s)	468, 1200, 1436, 1566, 1602, 1791, 1874
SatI	GCNGC	7 cut(s)	161, 492, 1133, 1275, 1302, 1821, 1836
Sau3AI	GATC	9 cut(s)	203, 733, 945, 973, 1185, 1261, 1713, 1744, 2036
Sau96I	GGNCC	6 cut(s)	371, 1218, 1286, 1295, 1462, 2063
SchI	GAGTC	2 cut(s)	1078, 2141
ScrFI	CCNGG	4 cut(s)	951, 1038, 1074, 1222
SduI	GDGCHC	6 cut(s)	402, 687, 864, 1012, 1786, 1989
SfaNI	GCATC	5 cut(s)	120, 545, 654, 1150, 1688
Sfr303I	CCGCGG	1 cut(s)	492
SgrBI	CCGCGG	1 cut(s)	492
SinI	GGWCC	5 cut(s)	371, 1218, 1295, 1462, 2063
SmiMI	CAYNNNNRTG	4 cut(s)	362, 677, 1112, 1331
SmlI	CTYRAG	2 cut(s)	187, 2009
SmoI	CTYRAG	2 cut(s)	187, 2009
Sse9I	AATT	9 cut(s)	432, 524, 702, 831, 1168, 1389, 1536, 1562, 1750
SseBI	AGGCCT	1 cut(s)	1406
SsiI	CCGC	5 cut(s)	447, 489, 491, 693, 1381
SspI	AATATT	1 cut(s)	612
SstI	GAGCTC	3 cut(s)	402, 864, 1786
StuI	AGGCCT	1 cut(s)	1406
StyD4I	CCNGG	4 cut(s)	949, 1036, 1072, 1220
StyI	CCWWGG	3 cut(s)	177, 1401, 1907
TaaI	ACNGT	5 cut(s)	335, 464, 1153, 1166, 1962
TaiI	ACGT	2 cut(s)	783, 1015
TaqI	TCGA	1 cut(s)	166
TaqII	GACCGA	1 cut(s)	2080
TasI	AATT	9 cut(s)	432, 524, 702, 831, 1168, 1389, 1536, 1562, 1750
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2017
Tru1I	TTAA	7 cut(s)	468, 1200, 1436, 1566, 1602, 1791, 1874
Tru9I	TTAA	7 cut(s)	468, 1200, 1436, 1566, 1602, 1791, 1874
TscAI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1658, 1845
TseFI	GTSAC	2 cut(s)	823, 1549
TseI	GCWGC	6 cut(s)	160, 1132, 1274, 1301, 1820, 1835
Tsp45I	GTSAC	2 cut(s)	823, 1549
TspGWI	ACGGA	2 cut(s)	27, 714
TspRI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1658, 1845
VneI	GTGCAC	1 cut(s)	1985
VpaK11BI	GGWCC	5 cut(s)	371, 1218, 1295, 1462, 2063
XapI	RAATTY	2 cut(s)	702, 1562
XbaI	TCTAGA	1 cut(s)	1048
XmiI	GTMKAC	1 cut(s)	1496
XmnI	GAANNNNTTC	2 cut(s)	335, 1950
Zsp2I	ATGCAT	1 cut(s)	2127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.