Rmu_sc0004595.1_g000001

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004595.1
Physical Location & Seq
Reverse (-)
1 .. 2565
2565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004595.1_g000001.1.cds

Sequence Viewer

Length: 1319 bp
atggattcaaatgtggtggtcagaagctcatcacctccgtcccatgaaggaatcagaaaggtacggacagcgataaggctgttcttagtgttggtggtgtttggagggtgtgttttgctctatgtcatgatgcccacaaacacatataagcagatatggatgcctcgaatccgagccaaggccaattcaagtacctattttggttcacaaggtgcaaatcttctggtattcacattgcccattatgttcattgctgtgatggggtgtgtgtatctccatctgggaaagaagttgaatgattataaaatagaaagcagtgacggcaaaactaaccgtttagctgtatggaaacagcccatgctggtgaaaggtcctctaggcattgtttctgggatagagctcaccttcttcatcatgtttattgcactcctaatttggtctttctctacgtacttgaccaacggttttgacaaaatcacaccactatccgcggcgaagagccatgaaaaagtatgggaagctaaattggggagtgcatcattgaggctagggcttttgggtaacatatgccttgcacttctcttctttccggttgctcgtggctcgtcgattttgcccctgtttggcctcccccctgaggctagcatcaagtatcatatatggctaggaaatatagtcatggtgctcttcacagctcatggaatttgttacatcatctattgggctgtcacagatcagatgtttcagatgataaaatgggagaaaactggcatatcaaacatagctggagagctagctttgctctctggacttgccatgtggatgactacaatccctcgcattaggcgcaaaatgtttgagctcttcttctacacacactacctttacatcctcttcatggtcttcttcatctttcatgttggcgtctcctatgctggcattatgctccctggcttcttcctcttcctggttgatcgttacctacgattcttgcaatccaggagaagagcgcgtttggtctctgcccgagtcttgccgggtgaatctttagaactcaacttcaccaagagtcccgggttgaaatacaatccaacaagcgtcatgttcataaatgtgcctagtatttccaagctgcaatggcatcctttcactgttacttcaaacagtaatttcgagccagagaagatcagtgtcgtcatcaaaggtgaaggaagttggaccaggaagctttaccaagtcctttcatcgccttctacaagtgatcggattgaggctgcagttgaagggccttatggacctgatgcaactcattttctaag

Protein Analysis

439

Amino Acids

49.57

Weight (kDa)

9.8

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AccII CGCG 2 cut(s) 491, 1012
AciI CCGC 2 cut(s) 489, 491
AcsI RAATTY 1 cut(s) 702
AcyI GRCGYC 1 cut(s) 924
AdeI CACNNNGTG 1 cut(s) 212
AfaI GTAC 3 cut(s) 63, 193, 452
AfiI CCNNNNNNNGG 5 cut(s) 178, 623, 637, 898, 967
AgsI TTSAA 6 cut(s) 9, 189, 295, 1081, 1161, 1283
AjnI CCWGG 4 cut(s) 949, 966, 998, 1220
Alw21I GWGCWC 3 cut(s) 402, 687, 864
Alw26I GTCTC 2 cut(s) 931, 1024
Ama87I CYCGRG 2 cut(s) 1026, 1073
AoxI GGCC 3 cut(s) 180, 625, 1286
ApeKI GCWGC 2 cut(s) 1132, 1274
ApoI RAATTY 1 cut(s) 702
AspLEI GCGC 2 cut(s) 849, 1012
AspS9I GGNCC 4 cut(s) 371, 1218, 1286, 1295
AsuC2I CCSGG 3 cut(s) 1038, 1074, 1075
AsuHPI GGTGA 6 cut(s) 24, 376, 394, 1052, 1054, 1217
AsuNHI GCTAGC 2 cut(s) 641, 793
AvaI CYCGRG 2 cut(s) 1026, 1073
AvaII GGWCC 3 cut(s) 371, 1218, 1295
AxyI CCTNAGG 1 cut(s) 636
BanII GRGCYC 2 cut(s) 402, 864
BauI CACGAG 1 cut(s) 597
BbsI GAAGAC 1 cut(s) 895
Bbv12I GWGCWC 3 cut(s) 402, 687, 864
BbvI GCAGC 2 cut(s) 1119, 1261
BccI CCATC 2 cut(s) 253, 285
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 4 cut(s) 951, 968, 1000, 1222
BcnI CCSGG 3 cut(s) 1038, 1074, 1075
BcoDI GTCTC 2 cut(s) 931, 1024
BfaI CTAG 6 cut(s) 377, 548, 642, 665, 794, 1119
BfmI CTRYAG 1 cut(s) 1275
BisI GCNGC 3 cut(s) 492, 1133, 1275
BlsI GCNGC 3 cut(s) 493, 1134, 1276
Bme1390I CCNGG 7 cut(s) 951, 968, 1000, 1038, 1074, 1075, 1222
Bme18I GGWCC 3 cut(s) 371, 1218, 1295
BmeT110I CYCGRG 2 cut(s) 1026, 1073
BmgT120I GGNCC 4 cut(s) 371, 1218, 1286, 1295
BmrFI CCNGG 7 cut(s) 951, 968, 1000, 1038, 1074, 1075, 1222
BmsI GCATC 6 cut(s) 120, 150, 545, 654, 1150, 1291
BmtI GCTAGC 2 cut(s) 645, 797
BpiI GAAGAC 1 cut(s) 895
BpmI CTGGAG 1 cut(s) 807
BpuMI CCSGG 3 cut(s) 1038, 1074, 1075
BsaAI YACGTR 1 cut(s) 450
BsaHI GRCGYC 1 cut(s) 924
BsaI GGTCTC 1 cut(s) 1024
BsaJI CCNNGG 4 cut(s) 177, 489, 949, 1073
BsaWI WCCGGW 1 cut(s) 589
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 5 cut(s) 178, 623, 637, 898, 967
Bse1I ACTGG 1 cut(s) 772
Bse21I CCTNAGG 1 cut(s) 636
Bse3DI GCAATG 3 cut(s) 233, 249, 1142
BseBI CCWGG 4 cut(s) 951, 968, 1000, 1222
BseDI CCNNGG 4 cut(s) 177, 489, 949, 1073
BseGI GGATG 4 cut(s) 165, 828, 888, 1141
BseLI CCNNNNNNNGG 5 cut(s) 178, 623, 637, 898, 967
BseMI GCAATG 3 cut(s) 233, 249, 1142
BseMII CTCAG 1 cut(s) 627
BseNI ACTGG 1 cut(s) 772
BseXI GCAGC 2 cut(s) 1119, 1261
Bsh1236I CGCG 2 cut(s) 491, 1012
BshFI GGCC 3 cut(s) 182, 627, 1288
BsiHKAI GWGCWC 3 cut(s) 402, 687, 864
BsiHKCI CYCGRG 2 cut(s) 1026, 1073
BsiSI CCGG 3 cut(s) 590, 1037, 1074
BslFI GGGAC 2 cut(s) 25, 1056
BslI CCNNNNNNNGG 5 cut(s) 178, 623, 637, 898, 967
BsmAI GTCTC 2 cut(s) 931, 1024
BsmBI CGTCTC 1 cut(s) 931
BsmFI GGGAC 2 cut(s) 25, 1056
BsnI GGCC 3 cut(s) 182, 627, 1288
Bso31I GGTCTC 1 cut(s) 1024
BsoBI CYCGRG 2 cut(s) 1026, 1073
Bsp1286I GDGCHC 3 cut(s) 402, 687, 864
Bsp143I GATC 4 cut(s) 733, 973, 1185, 1261
BspACI CCGC 2 cut(s) 489, 491
BspANI GGCC 3 cut(s) 182, 627, 1288
BspCNI CTCAG 1 cut(s) 628
BspFNI CGCG 2 cut(s) 491, 1012
BspHI TCATGA 1 cut(s) 126
BspMAI CTGCAG 1 cut(s) 1279
BspOI GCTAGC 2 cut(s) 645, 797
BspQI GCTCTTC 4 cut(s) 491, 692, 869, 1000
BspTNI GGTCTC 1 cut(s) 1024
BsrDI GCAATG 3 cut(s) 233, 249, 1142
BsrI ACTGG 1 cut(s) 772
BssECI CCNNGG 4 cut(s) 177, 489, 949, 1073
BssMI GATC 4 cut(s) 733, 973, 1185, 1261
BssNI GRCGYC 1 cut(s) 924
BssSI CACGAG 1 cut(s) 597
BssT1I CCWWGG 1 cut(s) 177
Bst2BI CACGAG 1 cut(s) 597
Bst2UI CCWGG 4 cut(s) 951, 968, 1000, 1222
Bst4CI ACNGT 4 cut(s) 335, 464, 1153, 1166
Bst6I CTCTTC 7 cut(s) 491, 587, 692, 869, 899, 968, 1000
BstACI GRCGYC 1 cut(s) 924
BstBAI YACGTR 1 cut(s) 450
BstC8I GCNNGC 3 cut(s) 643, 795, 937
BstDEI CTNAG 3 cut(s) 85, 636, 1316
BstDSI CCRYGG 1 cut(s) 489
BstF5I GGATG 4 cut(s) 165, 828, 888, 1141
BstFNI CGCG 2 cut(s) 491, 1012
BstHHI GCGC 2 cut(s) 849, 1012
BstKTI GATC 4 cut(s) 736, 976, 1188, 1264
BstMAI GTCTC 2 cut(s) 931, 1024
BstMBI GATC 4 cut(s) 733, 973, 1185, 1261
BstMWI GCNNNNNNNGC 4 cut(s) 321, 799, 846, 1138
BstNI CCWGG 4 cut(s) 951, 968, 1000, 1222
BstSCI CCNGG 7 cut(s) 949, 966, 998, 1036, 1072, 1073, 1220
BstSFI CTRYAG 1 cut(s) 1275
BstSNI TACGTA 1 cut(s) 450
BstUI CGCG 2 cut(s) 491, 1012
BstV1I GCAGC 2 cut(s) 1119, 1261
BstV2I GAAGAC 1 cut(s) 895
Bsu36I CCTNAGG 1 cut(s) 636
BsuRI GGCC 3 cut(s) 182, 627, 1288
BtgI CCRYGG 1 cut(s) 489
BtgZI GCGATG 1 cut(s) 1230
BtsCI GGATG 4 cut(s) 165, 828, 888, 1141
BtsI GCAGTG 1 cut(s) 322
BtsIMutI CAGTG 3 cut(s) 322, 1149, 1195
Cac8I GCNNGC 3 cut(s) 643, 795, 937
CciI TCATGA 1 cut(s) 126
CfoI GCGC 2 cut(s) 849, 1012
Cfr13I GGNCC 4 cut(s) 371, 1218, 1286, 1295
Cfr42I CCGCGG 1 cut(s) 492
Cfr9I CCCGGG 1 cut(s) 1073
CseI GACGC 2 cut(s) 913, 1087
Csp6I GTAC 3 cut(s) 62, 192, 451
CspCI CAANNNNNGTGG 1 cut(s) 32
CviQI GTAC 3 cut(s) 62, 192, 451
DdeI CTNAG 3 cut(s) 85, 636, 1316
DpnI GATC 4 cut(s) 735, 975, 1187, 1263
DpnII GATC 4 cut(s) 733, 973, 1185, 1261
DraIII CACNNNGTG 1 cut(s) 212
Eam1104I CTCTTC 7 cut(s) 491, 587, 692, 869, 899, 968, 1000
EarI CTCTTC 7 cut(s) 491, 587, 692, 869, 899, 968, 1000
Ecl136II GAGCTC 2 cut(s) 400, 862
Eco105I TACGTA 1 cut(s) 450
Eco130I CCWWGG 1 cut(s) 177
Eco24I GRGCYC 2 cut(s) 402, 864
Eco31I GGTCTC 1 cut(s) 1024
Eco47I GGWCC 3 cut(s) 371, 1218, 1295
Eco53kI GAGCTC 2 cut(s) 400, 862
Eco81I CCTNAGG 1 cut(s) 636
Eco88I CYCGRG 2 cut(s) 1026, 1073
EcoICRI GAGCTC 2 cut(s) 400, 862
EcoO109I RGGNCCY 2 cut(s) 371, 1286
EcoRII CCWGG 4 cut(s) 949, 966, 998, 1220
EcoT14I CCWWGG 1 cut(s) 177
EcoT38I GRGCYC 2 cut(s) 402, 864
ErhI CCWWGG 1 cut(s) 177
Esp3I CGTCTC 1 cut(s) 931
FaqI GGGAC 2 cut(s) 25, 1056
FauNDI CATATG 1 cut(s) 566
Fnu4HI GCNGC 3 cut(s) 492, 1133, 1275
FokI GGATG 4 cut(s) 172, 835, 875, 1128
FriOI GRGCYC 2 cut(s) 402, 864
Fsp4HI GCNGC 3 cut(s) 492, 1133, 1275
FspBI CTAG 6 cut(s) 377, 548, 642, 665, 794, 1119
GlaI GCGC 2 cut(s) 848, 1011
GluI GCNGC 3 cut(s) 492, 1133, 1275
GsuI CTGGAG 1 cut(s) 807
HaeIII GGCC 3 cut(s) 182, 627, 1288
HapII CCGG 3 cut(s) 590, 1037, 1074
HgaI GACGC 2 cut(s) 913, 1087
HhaI GCGC 2 cut(s) 849, 1012
Hin1I GRCGYC 1 cut(s) 924
Hin6I GCGC 2 cut(s) 847, 1010
HinP1I GCGC 2 cut(s) 847, 1010
HindIII AAGCTT 1 cut(s) 1226
HinfI GANTC 7 cut(s) 5, 51, 168, 987, 1029, 1043, 1069
HpaII CCGG 3 cut(s) 590, 1037, 1074
HphI GGTGA 6 cut(s) 24, 376, 394, 1052, 1054, 1217
Hpy166II GTNNAC 1 cut(s) 206
Hpy188I TCNGA 6 cut(s) 23, 56, 173, 738, 747, 1266
Hpy188III TCNNGA 2 cut(s) 127, 807
Hpy8I GTNNAC 1 cut(s) 206
Hpy99I CGWCG 1 cut(s) 610
HpyAV CCTTC 5 cut(s) 41, 415, 1202, 1260, 1277
HpyCH4III ACNGT 4 cut(s) 335, 464, 1153, 1166
HpyCH4IV ACGT 1 cut(s) 449
HpyCH4V TGCA 8 cut(s) 215, 425, 536, 575, 994, 1135, 1277, 1304
HpyF10VI GCNNNNNNNGC 4 cut(s) 321, 799, 846, 1138
HpyF3I CTNAG 3 cut(s) 85, 636, 1316
HpySE526I ACGT 1 cut(s) 449
Hsp92I GRCGYC 1 cut(s) 924
HspAI GCGC 2 cut(s) 847, 1010
KspI CCGCGG 1 cut(s) 492
Kzo9I GATC 4 cut(s) 733, 973, 1185, 1261
LguI GCTCTTC 4 cut(s) 491, 692, 869, 1000
LmnI GCTCC 1 cut(s) 951
Lsp1109I GCAGC 2 cut(s) 1119, 1261
LweI GCATC 6 cut(s) 120, 150, 545, 654, 1150, 1291
MaeI CTAG 6 cut(s) 377, 548, 642, 665, 794, 1119
MaeII ACGT 1 cut(s) 449
MaeIII GTNAC 6 cut(s) 317, 560, 707, 727, 977, 1153
MalI GATC 4 cut(s) 735, 975, 1187, 1263
MboI GATC 4 cut(s) 733, 973, 1185, 1261
MhlI GDGCHC 3 cut(s) 402, 687, 864
MluCI AATT 5 cut(s) 184, 432, 524, 702, 1168
MlyI GAGTC 2 cut(s) 1038, 1078
MmeI TCCRAC 2 cut(s) 1115, 1196
MslI CAYNNNNRTG 4 cut(s) 254, 362, 821, 1112
MspA1I CMGCKG 1 cut(s) 491
MspI CCGG 3 cut(s) 590, 1037, 1074
MspR9I CCNGG 7 cut(s) 951, 968, 1000, 1038, 1074, 1075, 1222
MvaI CCWGG 4 cut(s) 951, 968, 1000, 1222
MvnI CGCG 2 cut(s) 491, 1012
MwoI GCNNNNNNNGC 4 cut(s) 321, 799, 846, 1138
NciI CCSGG 3 cut(s) 1038, 1074, 1075
NdeI CATATG 1 cut(s) 566
NdeII GATC 4 cut(s) 733, 973, 1185, 1261
NheI GCTAGC 2 cut(s) 641, 793
NmuCI GTSAC 2 cut(s) 317, 727
PagI TCATGA 1 cut(s) 126
PciSI GCTCTTC 4 cut(s) 491, 692, 869, 1000
PcsI WCGNNNNNNNCGW 1 cut(s) 982
PfeI GAWTC 5 cut(s) 5, 51, 168, 987, 1043
PfoI TCCNGGA 1 cut(s) 998
PkrI GCNGC 3 cut(s) 493, 1134, 1276
PleI GAGTC 2 cut(s) 1037, 1077
PpsI GAGTC 2 cut(s) 1037, 1077
Ppu21I YACGTR 1 cut(s) 450
PpuMI RGGWCCY 1 cut(s) 371
PsiI TTATAA 1 cut(s) 303
Psp124BI GAGCTC 2 cut(s) 402, 864
Psp5II RGGWCCY 1 cut(s) 371
Psp6I CCWGG 4 cut(s) 949, 966, 998, 1220
PspGI CCWGG 4 cut(s) 949, 966, 998, 1220
PspPI GGNCC 4 cut(s) 371, 1218, 1286, 1295
PspPPI RGGWCCY 1 cut(s) 371
PstI CTGCAG 1 cut(s) 1279
RsaI GTAC 3 cut(s) 63, 193, 452
RsaNI GTAC 3 cut(s) 62, 192, 451
RseI CAYNNNNRTG 4 cut(s) 254, 362, 821, 1112
SacI GAGCTC 2 cut(s) 402, 864
SacII CCGCGG 1 cut(s) 492
SapI GCTCTTC 4 cut(s) 491, 692, 869, 1000
SatI GCNGC 3 cut(s) 492, 1133, 1275
Sau3AI GATC 4 cut(s) 733, 973, 1185, 1261
Sau96I GGNCC 4 cut(s) 371, 1218, 1286, 1295
SchI GAGTC 2 cut(s) 1038, 1078
ScrFI CCNGG 7 cut(s) 951, 968, 1000, 1038, 1074, 1075, 1222
SduI GDGCHC 3 cut(s) 402, 687, 864
SfaNI GCATC 6 cut(s) 120, 150, 545, 654, 1150, 1291
SfcI CTRYAG 1 cut(s) 1275
Sfr303I CCGCGG 1 cut(s) 492
SgrBI CCGCGG 1 cut(s) 492
SinI GGWCC 3 cut(s) 371, 1218, 1295
SmaI CCCGGG 1 cut(s) 1075
SmiMI CAYNNNNRTG 4 cut(s) 254, 362, 821, 1112
SnaBI TACGTA 1 cut(s) 450
Sse9I AATT 5 cut(s) 184, 432, 524, 702, 1168
SsiI CCGC 2 cut(s) 489, 491
SspMI CTAG 6 cut(s) 377, 548, 642, 665, 794, 1119
SstI GAGCTC 2 cut(s) 402, 864
StyD4I CCNGG 7 cut(s) 949, 966, 998, 1036, 1072, 1073, 1220
StyI CCWWGG 1 cut(s) 177
TaaI ACNGT 4 cut(s) 335, 464, 1153, 1166
TaiI ACGT 1 cut(s) 452
TaqI TCGA 3 cut(s) 166, 608, 1173
TasI AATT 5 cut(s) 184, 432, 524, 702, 1168
TauI GCSGC 1 cut(s) 494
TfiI GAWTC 5 cut(s) 5, 51, 168, 987, 1043
TscAI CASTG 3 cut(s) 322, 1156, 1195
TseFI GTSAC 2 cut(s) 317, 727
TseI GCWGC 2 cut(s) 1132, 1274
Tsp45I GTSAC 2 cut(s) 317, 727
TspDTI ATGAA 9 cut(s) 60, 238, 400, 519, 886, 898, 905, 1096, 1233
TspGWI ACGGA 2 cut(s) 27, 79
TspMI CCCGGG 1 cut(s) 1073
TspRI CASTG 3 cut(s) 322, 1156, 1195
VpaK11BI GGWCC 3 cut(s) 371, 1218, 1295
XapI RAATTY 1 cut(s) 702
XmaI CCCGGG 1 cut(s) 1073
XspI CTAG 6 cut(s) 377, 548, 642, 665, 794, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.