Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

35711520 .. 35715225

Gene Structure 3706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG234100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACGGACAGCGATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGCTCTATGTCATGATGCCCACAAACACATATAGGCAAATATGGCTGCCTCGAATCCGAGCTGAGGCCGGCTCAAGTACCTATTTTGGAGCGCAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGGTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATAGAAAGCAGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAAGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCTGGAGAGCTAGCTTTGCTCTCTGGACTGGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTTGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTACTTCAAACAGTAATTTGGAGCCAGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCCTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGCAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACCCAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGATATTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATCGAGCACAGTTCCTATAAGATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCAAGGAGTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGTCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

718

Amino Acids

80.81

Weight (kDa)

9.44

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	183 - 303	1.1e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	337 - 434	7.5e-24	FAD-binding domain
NAD_binding_6	PF08030	441 - 701	3.3e-20	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 1929
Acc36I	ACCTGC	1 cut(s)	1873
AccI	GTMKAC	1 cut(s)	1496
AccII	CGCG	3 cut(s)	491, 1012, 1383
AciI	CCGC	4 cut(s)	489, 491, 1381, 1424
AclWI	GGATC	1 cut(s)	2047
AcoI	YGGCCR	1 cut(s)	813
AcsI	RAATTY	1 cut(s)	702
AcuI	CTGAAG	1 cut(s)	1443
AcyI	GRCGYC	1 cut(s)	924
AfaI	GTAC	4 cut(s)	63, 193, 452, 653
AfiI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
AgsI	TTSAA	8 cut(s)	9, 295, 1081, 1161, 1283, 1450, 1606, 2035
AjnI	CCWGG	4 cut(s)	949, 966, 998, 1220
AjuI	GAANNNNNNNTTGG	2 cut(s)	1404, 1436
Alw21I	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
Alw26I	GTCTC	4 cut(s)	931, 1024, 1551, 1971
Alw44I	GTGCAC	1 cut(s)	1988
AlwI	GGATC	1 cut(s)	2047
Ama87I	CYCGRG	3 cut(s)	1026, 1073, 2027
AoxI	GGCC	6 cut(s)	180, 625, 813, 1286, 1404, 1669
ApaI	GGGCCC	1 cut(s)	1290
ApaLI	GTGCAC	1 cut(s)	1988
ApeKI	GCWGC	5 cut(s)	160, 1132, 1274, 1823, 1838
ApoI	RAATTY	1 cut(s)	702
Asp700I	GAANNNNTTC	1 cut(s)	1953
AspLEI	GCGC	4 cut(s)	208, 849, 1012, 1649
AspS9I	GGNCC	6 cut(s)	371, 1218, 1286, 1287, 1295, 2066
AsuC2I	CCSGG	3 cut(s)	1038, 1074, 1075
AsuNHI	GCTAGC	2 cut(s)	641, 793
AvaI	CYCGRG	3 cut(s)	1026, 1073, 2027
AvaII	GGWCC	4 cut(s)	371, 1218, 1295, 2066
BaeGI	GKGCMC	2 cut(s)	1290, 1992
BalI	TGGCCA	1 cut(s)	815
BanII	GRGCYC	4 cut(s)	402, 864, 1290, 1789
BauI	CACGAG	1 cut(s)	597
BbsI	GAAGAC	2 cut(s)	895, 1946
Bbv12I	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
BbvCI	CCTCAGC	1 cut(s)	177
BbvI	GCAGC	5 cut(s)	147, 1119, 1261, 1810, 1850
BccI	CCATC	3 cut(s)	253, 285, 2147
BceAI	ACGGC	2 cut(s)	337, 1419
BciT130I	CCWGG	4 cut(s)	951, 968, 1000, 1222
BcnI	CCSGG	3 cut(s)	1038, 1074, 1075
BcoDI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BfmI	CTRYAG	1 cut(s)	1275
BfuAI	ACCTGC	1 cut(s)	1873
BisI	GCNGC	6 cut(s)	161, 492, 1133, 1275, 1824, 1839
BlsI	GCNGC	6 cut(s)	162, 493, 1134, 1276, 1825, 1840
Bme1390I	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
Bme18I	GGWCC	4 cut(s)	371, 1218, 1295, 2066
BmeT110I	CYCGRG	3 cut(s)	1026, 1073, 2027
BmgT120I	GGNCC	6 cut(s)	371, 1218, 1286, 1287, 1295, 2066
BmiI	GGNNCC	2 cut(s)	1176, 1288
BmrFI	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
BmsI	GCATC	6 cut(s)	120, 545, 654, 1150, 1291, 1691
BmtI	GCTAGC	2 cut(s)	645, 797
BpiI	GAAGAC	2 cut(s)	895, 1946
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	2 cut(s)	807, 1511
Bpu10I	CCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	2 cut(s)	172, 1997
BpuMI	CCSGG	3 cut(s)	1038, 1074, 1075
BsaAI	YACGTR	1 cut(s)	450
BsaBI	GATNNNNATC	1 cut(s)	1715
BsaHI	GRCGYC	1 cut(s)	924
BsaI	GGTCTC	2 cut(s)	1024, 1551
BsaJI	CCNNGG	6 cut(s)	489, 949, 1073, 1401, 1869, 1910
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	3 cut(s)	772, 816, 1661
Bse3DI	GCAATG	3 cut(s)	233, 249, 1142
Bse8I	GATNNNNATC	1 cut(s)	1715
BseBI	CCWGG	4 cut(s)	951, 968, 1000, 1222
BseDI	CCNNGG	6 cut(s)	489, 949, 1073, 1401, 1869, 1910
BseGI	GGATG	3 cut(s)	828, 888, 1141
BseJI	GATNNNNATC	1 cut(s)	1715
BseLI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
BseMI	GCAATG	3 cut(s)	233, 249, 1142
BseMII	CTCAG	3 cut(s)	168, 627, 1603
BseNI	ACTGG	3 cut(s)	772, 816, 1661
BseSI	GKGCMC	2 cut(s)	1290, 1992
BseXI	GCAGC	5 cut(s)	147, 1119, 1261, 1810, 1850
BsgI	GTGCAG	1 cut(s)	1857
Bsh1236I	CGCG	3 cut(s)	491, 1012, 1383
Bsh1285I	CGRYCG	1 cut(s)	1746
BshFI	GGCC	6 cut(s)	182, 627, 815, 1288, 1406, 1671
BsiEI	CGRYCG	1 cut(s)	1746
BsiHKAI	GWGCWC	5 cut(s)	402, 687, 864, 1752, 1992
BsiHKCI	CYCGRG	3 cut(s)	1026, 1073, 2027
BsiSI	CCGG	4 cut(s)	183, 590, 1037, 1074
BslFI	GGGAC	2 cut(s)	25, 1056
BslI	CCNNNNNNNGG	4 cut(s)	178, 623, 898, 967
BsmAI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BsmBI	CGTCTC	1 cut(s)	931
BsmFI	GGGAC	2 cut(s)	25, 1056
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	6 cut(s)	182, 627, 815, 1288, 1406, 1671
Bso31I	GGTCTC	2 cut(s)	1024, 1551
BsoBI	CYCGRG	3 cut(s)	1026, 1073, 2027
Bsp120I	GGGCCC	1 cut(s)	1286
Bsp1286I	GDGCHC	7 cut(s)	402, 687, 864, 1290, 1752, 1789, 1992
Bsp143I	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
BspACI	CCGC	4 cut(s)	489, 491, 1381, 1424
BspANI	GGCC	6 cut(s)	182, 627, 815, 1288, 1406, 1671
BspCNI	CTCAG	3 cut(s)	169, 628, 1602
BspFNI	CGCG	3 cut(s)	491, 1012, 1383
BspHI	TCATGA	2 cut(s)	126, 1692
BspLI	GGNNCC	2 cut(s)	1176, 1288
BspMAI	CTGCAG	1 cut(s)	1279
BspMI	ACCTGC	1 cut(s)	1873
BspOI	GCTAGC	2 cut(s)	645, 797
BspPI	GGATC	1 cut(s)	2047
BspQI	GCTCTTC	3 cut(s)	692, 869, 1000
BspTNI	GGTCTC	2 cut(s)	1024, 1551
BsrDI	GCAATG	3 cut(s)	233, 249, 1142
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	3 cut(s)	772, 816, 1661
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	6 cut(s)	489, 949, 1073, 1401, 1869, 1910
BssMI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
BssNI	GRCGYC	1 cut(s)	924
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	2 cut(s)	1869, 1910
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	4 cut(s)	951, 968, 1000, 1222
Bst4CI	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
Bst6I	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
BstACI	GRCGYC	1 cut(s)	924
BstBAI	YACGTR	1 cut(s)	450
BstC8I	GCNNGC	6 cut(s)	184, 643, 795, 937, 1385, 1418
BstDEI	CTNAG	5 cut(s)	85, 177, 636, 1316, 1589
BstDSI	CCRYGG	2 cut(s)	489, 1401
BstF5I	GGATG	3 cut(s)	828, 888, 1141
BstFNI	CGCG	3 cut(s)	491, 1012, 1383
BstHHI	GCGC	4 cut(s)	208, 849, 1012, 1649
BstKTI	GATC	6 cut(s)	736, 976, 1188, 1264, 1746, 2042
BstMAI	GTCTC	4 cut(s)	931, 1024, 1551, 1971
BstMBI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
BstMCI	CGRYCG	1 cut(s)	1746
BstMWI	GCNNNNNNNGC	9 cut(s)	157, 212, 321, 799, 846, 1138, 1829, 1838, 1888
BstNI	CCWGG	4 cut(s)	951, 968, 1000, 1222
BstSCI	CCNGG	7 cut(s)	949, 966, 998, 1036, 1072, 1073, 1220
BstSFI	CTRYAG	1 cut(s)	1275
BstSLI	GKGCMC	2 cut(s)	1290, 1992
BstUI	CGCG	3 cut(s)	491, 1012, 1383
BstV1I	GCAGC	5 cut(s)	147, 1119, 1261, 1810, 1850
BstV2I	GAAGAC	2 cut(s)	895, 1946
BsuRI	GGCC	6 cut(s)	182, 627, 815, 1288, 1406, 1671
BtgI	CCRYGG	2 cut(s)	489, 1401
BtgZI	GCGATG	1 cut(s)	1230
BtsCI	GGATG	3 cut(s)	828, 888, 1141
BtsI	GCAGTG	3 cut(s)	322, 1357, 1848
BtsIMutI	CAGTG	6 cut(s)	322, 1149, 1195, 1357, 1654, 1848
BveI	ACCTGC	1 cut(s)	1873
Cac8I	GCNNGC	6 cut(s)	184, 643, 795, 937, 1385, 1418
CciI	TCATGA	2 cut(s)	126, 1692
CfoI	GCGC	4 cut(s)	208, 849, 1012, 1649
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	6 cut(s)	371, 1218, 1286, 1287, 1295, 2066
Cfr42I	CCGCGG	1 cut(s)	492
Cfr9I	CCCGGG	1 cut(s)	1073
CseI	GACGC	2 cut(s)	913, 1087
Csp6I	GTAC	4 cut(s)	62, 192, 451, 652
CspCI	CAANNNNNGTGG	1 cut(s)	32
CviQI	GTAC	4 cut(s)	62, 192, 451, 652
DdeI	CTNAG	5 cut(s)	85, 177, 636, 1316, 1589
DpnI	GATC	6 cut(s)	735, 975, 1187, 1263, 1745, 2041
DpnII	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
EaeI	YGGCCR	1 cut(s)	813
Eam1104I	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
EarI	CTCTTC	7 cut(s)	587, 692, 869, 899, 968, 1000, 1462
Ecl136II	GAGCTC	2 cut(s)	400, 862
Eco130I	CCWWGG	2 cut(s)	1869, 1910
Eco24I	GRGCYC	4 cut(s)	402, 864, 1290, 1789
Eco31I	GGTCTC	2 cut(s)	1024, 1551
Eco47I	GGWCC	4 cut(s)	371, 1218, 1295, 2066
Eco53kI	GAGCTC	2 cut(s)	400, 862
Eco57I	CTGAAG	1 cut(s)	1443
Eco88I	CYCGRG	3 cut(s)	1026, 1073, 2027
EcoICRI	GAGCTC	2 cut(s)	400, 862
EcoO109I	RGGNCCY	3 cut(s)	371, 1286, 1287
EcoRII	CCWGG	4 cut(s)	949, 966, 998, 1220
EcoT14I	CCWWGG	2 cut(s)	1869, 1910
EcoT22I	ATGCAT	1 cut(s)	2130
EcoT38I	GRGCYC	4 cut(s)	402, 864, 1290, 1789
ErhI	CCWWGG	2 cut(s)	1869, 1910
Esp3I	CGTCTC	1 cut(s)	931
FaqI	GGGAC	2 cut(s)	25, 1056
FauNDI	CATATG	4 cut(s)	566, 1510, 1546, 1598
FblI	GTMKAC	1 cut(s)	1496
Fnu4HI	GCNGC	6 cut(s)	161, 492, 1133, 1275, 1824, 1839
FokI	GGATG	3 cut(s)	835, 875, 1128
FriOI	GRGCYC	4 cut(s)	402, 864, 1290, 1789
Fsp4HI	GCNGC	6 cut(s)	161, 492, 1133, 1275, 1824, 1839
GlaI	GCGC	4 cut(s)	207, 848, 1011, 1648
GluI	GCNGC	6 cut(s)	161, 492, 1133, 1275, 1824, 1839
GsuI	CTGGAG	2 cut(s)	807, 1511
HaeIII	GGCC	6 cut(s)	182, 627, 815, 1288, 1406, 1671
HapII	CCGG	4 cut(s)	183, 590, 1037, 1074
HgaI	GACGC	2 cut(s)	913, 1087
HhaI	GCGC	4 cut(s)	208, 849, 1012, 1649
Hin1I	GRCGYC	1 cut(s)	924
Hin6I	GCGC	4 cut(s)	206, 847, 1010, 1647
HinP1I	GCGC	4 cut(s)	206, 847, 1010, 1647
HindIII	AAGCTT	2 cut(s)	1226, 1418
HpaII	CCGG	4 cut(s)	183, 590, 1037, 1074
Hpy166II	GTNNAC	4 cut(s)	1401, 1497, 1990, 2066
Hpy188III	TCNNGA	6 cut(s)	127, 807, 1528, 1693, 1708, 2014
Hpy8I	GTNNAC	4 cut(s)	1401, 1497, 1990, 2066
Hpy99I	CGWCG	1 cut(s)	610
HpyAV	CCTTC	8 cut(s)	41, 415, 1202, 1260, 1277, 1417, 1564, 1699
HpyCH4III	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
HpyCH4IV	ACGT	2 cut(s)	449, 1734
HpyF10VI	GCNNNNNNNGC	9 cut(s)	157, 212, 321, 799, 846, 1138, 1829, 1838, 1888
HpyF3I	CTNAG	5 cut(s)	85, 177, 636, 1316, 1589
HpySE526I	ACGT	2 cut(s)	449, 1734
Hsp92I	GRCGYC	1 cut(s)	924
HspAI	GCGC	4 cut(s)	206, 847, 1010, 1647
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
KspI	CCGCGG	1 cut(s)	492
Kzo9I	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
LguI	GCTCTTC	3 cut(s)	692, 869, 1000
LmnI	GCTCC	3 cut(s)	203, 951, 1174
Lsp1109I	GCAGC	5 cut(s)	147, 1119, 1261, 1810, 1850
LweI	GCATC	6 cut(s)	120, 545, 654, 1150, 1291, 1691
MaeII	ACGT	2 cut(s)	449, 1734
MaeIII	GTNAC	8 cut(s)	317, 560, 707, 727, 977, 1153, 1429, 1549
MalI	GATC	6 cut(s)	735, 975, 1187, 1263, 1745, 2041
MboI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
MhlI	GDGCHC	7 cut(s)	402, 687, 864, 1290, 1752, 1789, 1992
MlsI	TGGCCA	1 cut(s)	815
MluCI	AATT	6 cut(s)	432, 524, 702, 1168, 1389, 1536
MluNI	TGGCCA	1 cut(s)	815
MlyI	GAGTC	3 cut(s)	1038, 1078, 2144
MmeI	TCCRAC	3 cut(s)	1115, 1196, 1926
Mox20I	TGGCCA	1 cut(s)	815
Mph1103I	ATGCAT	1 cut(s)	2130
MroNI	GCCGGC	1 cut(s)	182
MroXI	GAANNNNTTC	1 cut(s)	1953
MscI	TGGCCA	1 cut(s)	815
MseI	TTAA	3 cut(s)	1436, 1794, 1877
MslI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
Msp20I	TGGCCA	1 cut(s)	815
MspA1I	CMGCKG	1 cut(s)	491
MspI	CCGG	4 cut(s)	183, 590, 1037, 1074
MspR9I	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	4 cut(s)	951, 968, 1000, 1222
MvnI	CGCG	3 cut(s)	491, 1012, 1383
MwoI	GCNNNNNNNGC	9 cut(s)	157, 212, 321, 799, 846, 1138, 1829, 1838, 1888
NaeI	GCCGGC	1 cut(s)	184
NciI	CCSGG	3 cut(s)	1038, 1074, 1075
NdeI	CATATG	4 cut(s)	566, 1510, 1546, 1598
NdeII	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
NgoMIV	GCCGGC	1 cut(s)	182
NheI	GCTAGC	2 cut(s)	641, 793
NlaIV	GGNNCC	2 cut(s)	1176, 1288
NmuCI	GTSAC	4 cut(s)	317, 727, 1429, 1549
NsiI	ATGCAT	1 cut(s)	2130
PaeR7I	CTCGAG	1 cut(s)	2027
PagI	TCATGA	2 cut(s)	126, 1692
PciSI	GCTCTTC	3 cut(s)	692, 869, 1000
PcsI	WCGNNNNNNNCGW	1 cut(s)	982
PctI	GAATGC	1 cut(s)	1445
PdiI	GCCGGC	1 cut(s)	184
PdmI	GAANNNNTTC	1 cut(s)	1953
PfeI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2020
PfoI	TCCNGGA	1 cut(s)	998
PkrI	GCNGC	6 cut(s)	162, 493, 1134, 1276, 1825, 1840
Ple19I	CGATCG	1 cut(s)	1746
PleI	GAGTC	3 cut(s)	1037, 1077, 2143
PpsI	GAGTC	3 cut(s)	1037, 1077, 2143
Ppu21I	YACGTR	1 cut(s)	450
PpuMI	RGGWCCY	1 cut(s)	371
PsiI	TTATAA	2 cut(s)	303, 1929
Psp124BI	GAGCTC	2 cut(s)	402, 864
Psp5II	RGGWCCY	1 cut(s)	371
Psp6I	CCWGG	4 cut(s)	949, 966, 998, 1220
PspGI	CCWGG	4 cut(s)	949, 966, 998, 1220
PspN4I	GGNNCC	2 cut(s)	1176, 1288
PspOMI	GGGCCC	1 cut(s)	1286
PspPI	GGNCC	6 cut(s)	371, 1218, 1286, 1287, 1295, 2066
PspPPI	RGGWCCY	1 cut(s)	371
PspXI	VCTCGAGB	1 cut(s)	2027
PstI	CTGCAG	1 cut(s)	1279
PvuI	CGATCG	1 cut(s)	1746
RsaI	GTAC	4 cut(s)	63, 193, 452, 653
RsaNI	GTAC	4 cut(s)	62, 192, 451, 652
RseI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
SacI	GAGCTC	2 cut(s)	402, 864
SacII	CCGCGG	1 cut(s)	492
SapI	GCTCTTC	3 cut(s)	692, 869, 1000
SaqAI	TTAA	3 cut(s)	1436, 1794, 1877
SatI	GCNGC	6 cut(s)	161, 492, 1133, 1275, 1824, 1839
Sau3AI	GATC	6 cut(s)	733, 973, 1185, 1261, 1743, 2039
Sau96I	GGNCC	6 cut(s)	371, 1218, 1286, 1287, 1295, 2066
SchI	GAGTC	3 cut(s)	1038, 1078, 2144
ScrFI	CCNGG	7 cut(s)	951, 968, 1000, 1038, 1074, 1075, 1222
SduI	GDGCHC	7 cut(s)	402, 687, 864, 1290, 1752, 1789, 1992
SfaNI	GCATC	6 cut(s)	120, 545, 654, 1150, 1291, 1691
SfcI	CTRYAG	1 cut(s)	1275
Sfr274I	CTCGAG	1 cut(s)	2027
Sfr303I	CCGCGG	1 cut(s)	492
SgrBI	CCGCGG	1 cut(s)	492
SinI	GGWCC	4 cut(s)	371, 1218, 1295, 2066
SlaI	CTCGAG	1 cut(s)	2027
SmaI	CCCGGG	1 cut(s)	1075
SmiMI	CAYNNNNRTG	4 cut(s)	254, 362, 821, 1112
SmlI	CTYRAG	3 cut(s)	187, 2012, 2027
SmoI	CTYRAG	3 cut(s)	187, 2012, 2027
Sse9I	AATT	6 cut(s)	432, 524, 702, 1168, 1389, 1536
SsiI	CCGC	4 cut(s)	489, 491, 1381, 1424
SstI	GAGCTC	2 cut(s)	402, 864
StyD4I	CCNGG	7 cut(s)	949, 966, 998, 1036, 1072, 1073, 1220
StyI	CCWWGG	2 cut(s)	1869, 1910
TaaI	ACNGT	6 cut(s)	335, 464, 1153, 1166, 1754, 1965
TaiI	ACGT	2 cut(s)	452, 1737
TaqI	TCGA	4 cut(s)	166, 608, 1746, 2028
TaqII	GACCGA	1 cut(s)	2083
TasI	AATT	6 cut(s)	432, 524, 702, 1168, 1389, 1536
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	7 cut(s)	5, 51, 168, 987, 1043, 1483, 2020
Tru1I	TTAA	3 cut(s)	1436, 1794, 1877
Tru9I	TTAA	3 cut(s)	1436, 1794, 1877
TscAI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1661, 1848
TseFI	GTSAC	4 cut(s)	317, 727, 1429, 1549
TseI	GCWGC	5 cut(s)	160, 1132, 1274, 1823, 1838
Tsp45I	GTSAC	4 cut(s)	317, 727, 1429, 1549
TspGWI	ACGGA	2 cut(s)	27, 79
TspMI	CCCGGG	1 cut(s)	1073
TspRI	CASTG	6 cut(s)	322, 1156, 1195, 1357, 1661, 1848
VneI	GTGCAC	1 cut(s)	1988
VpaK11BI	GGWCC	4 cut(s)	371, 1218, 1295, 2066
XapI	RAATTY	1 cut(s)	702
XhoI	CTCGAG	1 cut(s)	2027
XmaI	CCCGGG	1 cut(s)	1073
XmiI	GTMKAC	1 cut(s)	1496
XmnI	GAANNNNTTC	1 cut(s)	1953
Zsp2I	ATGCAT	1 cut(s)	2130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.