Rorug01G0252200

Ferric reduction oxidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
36092723 .. 36095505
2783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0252200.1

Sequence Viewer

Length: 1365 bp
ATGGTTATTCTCTATTTCATCTTTGCTTTCACATGTCTGTTACTTTTCCTCTTCATAACTTTCTTGTCTTCCCTCATACTCAGAATCTTTACAGGCAAGTCCATCAGAGACCCAAGCTACCCGCCTGTAAAAGGCACCGTTTTTCACCAGCTCTTATACTTCACCAAACTCTATGACCACCAAACCCAAATAGCCAGAGAAACCCCAACTTACCGGCTTCTTTCTCCTAACCACAGCTCTGTATACACATGTGATGCGCGAAATATAGAGCATGTCCTCAAAACCAAATTTTCCACATATACGAAAGGTGCATATAATGAACTTATAATGGGTGACACTTTTGGTCATGGGATATTTGTTGTTGATGGAGAGAAGTGGAGGCAGCAGAGGAAGCTTGCAAGTATGGAGTTCTCGACCAGGATTCTTAGAGATTTTAGCTGCTCTGTGTTTAGAAGAAATGCAGCCAAACTGGTTAAAGTTGTTCATGAGTTTTCAGATTCCAATTGTTCTTTTGATATGCAGGACTTGCTTATGAGATGTACCTTGGATTCAATATTCAAAGTTGGGTTTGGAATAGAGCTGAATTGCCTGGAGGAGTCGAGCAAATCAGGGTTAGGATTTATGAAGGCTTTTGATGAGTCAACTGCTCTGACTTACCGGCGATATGTTGATCCATTCTGGAAAGTTAAAAAATTTCTCAACGTTGGTTCTGAGGCCAGCCTTAGAAAGTATGTCAAAGTCATTAATGATTTTGTGGACCATCTAATCAGGAGCAAGAGGAAATTGCTAGCTGGGGAGAAAGCTGGTAATGACAAGGAGGATATACTATCGAGGTTCCTTGTGGAAAGTGAGAAGGATCCGGAGCAAATGAATGACAAATATCTAAGTGATATAATTCTGAATTTTATGATTGCTGGCAAAGATACAAGTGCAAATACACTCTCCTGGTTCTTCTACATGCTCAGCAAGAATCCTCTAATACAGGAGAAAGTTGCACAAGAAGTGATGGATGTCGTTGGTCTAAATCATGAAGCTAACATTGATGAATTTGTGGCAGATATAACTGATGCAGCTCTCGAACAAATGCATTATCTTCACGCTACTCTAACTGAGACATTGAGGCTATATCCTGCAGTTCCCCTGGATGGGAGATCTGCTGAGGTAGATGACATTCTTCCTGATGGCTTTAGAGTGAAAAAAGGAGATCGAATAACCTATATGGCCTATGCCATGGGAAGAATGCCTTACATATGGGGAAACGATGCTGAGGATTTCCGACCTGAAAGATGGCTCGAGAATGGAATTTTCAAGCCAGAGTCACCTTTCAAATTCGTTGCATTTCATGTTCGTATCACATTTTCTTAG

Protein Analysis

454

Amino Acids

52.47

Weight (kDa)

6.84

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 447 6.5e-67 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 243
AccII CGCG 1 cut(s) 259
AccIII TCCGGA 1 cut(s) 859
AciI CCGC 1 cut(s) 122
AclI AACGTT 1 cut(s) 702
AclWI GGATC 3 cut(s) 665, 851, 864
AcsI RAATTY 6 cut(s) 287, 692, 901, 1046, 1302, 1328
AfaI GTAC 1 cut(s) 541
AfiI CCNNNNNNNGG 3 cut(s) 131, 1145, 1146
AflIII ACRYGT 2 cut(s) 32, 248
AgsI TTSAA 4 cut(s) 552, 559, 1309, 1327
AjnI CCWGG 4 cut(s) 416, 588, 944, 1140
Alw26I GTCTC 2 cut(s) 102, 1106
AlwI GGATC 3 cut(s) 665, 851, 864
Ama87I CYCGRG 1 cut(s) 1292
Aor13HI TCCGGA 1 cut(s) 859
AoxI GGCC 2 cut(s) 714, 1221
ApeKI GCWGC 4 cut(s) 382, 438, 461, 1070
ApoI RAATTY 6 cut(s) 287, 692, 901, 1046, 1302, 1328
AseI ATTAAT 1 cut(s) 744
AspLEI GCGC 1 cut(s) 259
AspS9I GGNCC 1 cut(s) 757
AsuHPI GGTGA 4 cut(s) 137, 154, 344, 1311
AsuNHI GCTAGC 1 cut(s) 787
AvaI CYCGRG 1 cut(s) 1292
AvaII GGWCC 1 cut(s) 757
BamHI GGATCC 1 cut(s) 856
BanI GGYRCC 1 cut(s) 134
BbsI GAAGAC 1 cut(s) 60
BbvCI CCTCAGC 2 cut(s) 1158, 1266
BbvI GCAGC 4 cut(s) 394, 425, 473, 1082
BccI CCATC 7 cut(s) 110, 359, 768, 1000, 1139, 1175, 1281
BciT130I CCWGG 4 cut(s) 418, 590, 946, 1142
BcoDI GTCTC 2 cut(s) 102, 1106
BfaI CTAG 1 cut(s) 788
BfmI CTRYAG 1 cut(s) 1131
BglII AGATCT 1 cut(s) 1151
BisI GCNGC 4 cut(s) 383, 439, 462, 1071
BlpI GCTNAGC 1 cut(s) 962
BlsI GCNGC 4 cut(s) 384, 440, 463, 1072
Bme1390I CCNGG 4 cut(s) 418, 590, 946, 1142
Bme18I GGWCC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 1292
BmgT120I GGNCC 1 cut(s) 757
BmiI GGNNCC 3 cut(s) 136, 836, 858
BmrFI CCNGG 4 cut(s) 418, 590, 946, 1142
BmsI GCATC 3 cut(s) 244, 1057, 1252
BmtI GCTAGC 1 cut(s) 791
BpiI GAAGAC 1 cut(s) 60
BpmI CTGGAG 1 cut(s) 611
Bpu10I CCTNAGC 2 cut(s) 1158, 1266
Bpu1102I GCTNAGC 1 cut(s) 962
BsaI GGTCTC 1 cut(s) 102
BsaJI CCNNGG 3 cut(s) 543, 1140, 1230
BsaWI WCCGGW 1 cut(s) 859
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 1145, 1146
Bse118I RCCGGY 2 cut(s) 213, 657
Bse1I ACTGG 1 cut(s) 474
BseAI TCCGGA 1 cut(s) 859
BseBI CCWGG 4 cut(s) 418, 590, 946, 1142
BseDI CCNNGG 3 cut(s) 543, 1140, 1230
BseGI GGATG 2 cut(s) 1015, 1150
BseLI CCNNNNNNNGG 3 cut(s) 131, 1145, 1146
BseMII CTCAG 6 cut(s) 94, 702, 976, 1101, 1149, 1257
BseNI ACTGG 1 cut(s) 474
BseRI GAGGAG 1 cut(s) 608
BseXI GCAGC 4 cut(s) 394, 425, 473, 1082
BseYI CCCAGC 1 cut(s) 791
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 2 cut(s) 716, 1223
BshNI GGYRCC 1 cut(s) 134
BsiHKCI CYCGRG 1 cut(s) 1292
BsiSI CCGG 3 cut(s) 214, 658, 860
BslI CCNNNNNNNGG 3 cut(s) 131, 1145, 1146
BsmAI GTCTC 2 cut(s) 102, 1106
BsmI GAATGC 1 cut(s) 1245
BsnI GGCC 2 cut(s) 716, 1223
Bso31I GGTCTC 1 cut(s) 102
BsoBI CYCGRG 1 cut(s) 1292
Bsp13I TCCGGA 1 cut(s) 859
Bsp143I GATC 4 cut(s) 670, 856, 1151, 1204
Bsp1720I GCTNAGC 1 cut(s) 962
Bsp19I CCATGG 1 cut(s) 1230
BspACI CCGC 1 cut(s) 122
BspANI GGCC 2 cut(s) 716, 1223
BspCNI CTCAG 6 cut(s) 93, 703, 975, 1102, 1150, 1258
BspEI TCCGGA 1 cut(s) 859
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 2 cut(s) 484, 1027
BspLI GGNNCC 3 cut(s) 136, 836, 858
BspMAI CTGCAG 1 cut(s) 1135
BspOI GCTAGC 1 cut(s) 791
BspPI GGATC 3 cut(s) 665, 851, 864
BspT107I GGYRCC 1 cut(s) 134
BspTNI GGTCTC 1 cut(s) 102
BsrFI RCCGGY 2 cut(s) 213, 657
BsrI ACTGG 1 cut(s) 474
BssAI RCCGGY 2 cut(s) 213, 657
BssECI CCNNGG 3 cut(s) 543, 1140, 1230
BssMI GATC 4 cut(s) 670, 856, 1151, 1204
BssNAI GTATAC 1 cut(s) 244
BssT1I CCWWGG 2 cut(s) 543, 1230
Bst1107I GTATAC 1 cut(s) 244
Bst2UI CCWGG 4 cut(s) 418, 590, 946, 1142
Bst4CI ACNGT 1 cut(s) 139
Bst6I CTCTTC 1 cut(s) 56
BstAPI GCANNNNNTGC 1 cut(s) 526
BstC8I GCNNGC 4 cut(s) 396, 718, 789, 916
BstDSI CCRYGG 1 cut(s) 1230
BstENI CCTNNNNNAGG 1 cut(s) 129
BstF5I GGATG 2 cut(s) 1015, 1150
BstFNI CGCG 1 cut(s) 259
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 4 cut(s) 673, 859, 1154, 1207
BstMAI GTCTC 2 cut(s) 102, 1106
BstMBI GATC 4 cut(s) 670, 856, 1151, 1204
BstMWI GCNNNNNNNGC 2 cut(s) 391, 526
BstNI CCWGG 4 cut(s) 418, 590, 946, 1142
BstNSI RCATGY 4 cut(s) 36, 252, 275, 961
BstSCI CCNGG 4 cut(s) 416, 588, 944, 1140
BstSFI CTRYAG 1 cut(s) 1131
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 4 cut(s) 394, 425, 473, 1082
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 2 cut(s) 856, 1151
BstYI RGATCY 2 cut(s) 856, 1151
BstZ17I GTATAC 1 cut(s) 244
BsuRI GGCC 2 cut(s) 716, 1223
BtgI CCRYGG 1 cut(s) 1230
BtsCI GGATG 2 cut(s) 1015, 1150
Cac8I GCNNGC 4 cut(s) 396, 718, 789, 916
CciI TCATGA 2 cut(s) 484, 1027
CfoI GCGC 1 cut(s) 259
Cfr10I RCCGGY 2 cut(s) 213, 657
Cfr13I GGNCC 1 cut(s) 757
Csp6I GTAC 1 cut(s) 540
CviAII CATG 9 cut(s) 33, 249, 272, 347, 485, 958, 1028, 1231, 1343
CviQI GTAC 1 cut(s) 540
DpnI GATC 4 cut(s) 672, 858, 1153, 1206
DpnII GATC 4 cut(s) 670, 856, 1151, 1204
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 543, 1230
Eco31I GGTCTC 1 cut(s) 102
Eco47I GGWCC 1 cut(s) 757
Eco88I CYCGRG 1 cut(s) 1292
EcoNI CCTNNNNNAGG 1 cut(s) 129
EcoRII CCWGG 4 cut(s) 416, 588, 944, 1140
EcoT14I CCWWGG 2 cut(s) 543, 1230
EcoT22I ATGCAT 1 cut(s) 1089
ErhI CCWWGG 2 cut(s) 543, 1230
FaeI CATG 9 cut(s) 36, 252, 275, 350, 488, 961, 1031, 1234, 1346
FalI AAGNNNNNCTT 2 cut(s) 1228, 1260
FatI CATG 9 cut(s) 32, 248, 271, 346, 484, 957, 1027, 1230, 1342
FauI CCCGC 1 cut(s) 129
FauNDI CATATG 1 cut(s) 1250
FblI GTMKAC 1 cut(s) 243
Fnu4HI GCNGC 4 cut(s) 383, 439, 462, 1071
FokI GGATG 2 cut(s) 1022, 1157
Fsp4HI GCNGC 4 cut(s) 383, 439, 462, 1071
FspBI CTAG 1 cut(s) 788
GlaI GCGC 1 cut(s) 258
GluI GCNGC 4 cut(s) 383, 439, 462, 1071
GsaI CCCAGC 1 cut(s) 795
GsuI CTGGAG 1 cut(s) 611
HaeIII GGCC 2 cut(s) 716, 1223
HapII CCGG 3 cut(s) 214, 658, 860
HhaI GCGC 1 cut(s) 259
Hin1II CATG 9 cut(s) 36, 252, 275, 350, 488, 961, 1031, 1234, 1346
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HincII GTYRAC 1 cut(s) 642
HindII GTYRAC 1 cut(s) 642
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 8 cut(s) 84, 421, 497, 548, 596, 638, 970, 1316
HpaII CCGG 3 cut(s) 214, 658, 860
HphI GGTGA 4 cut(s) 137, 154, 344, 1311
Hpy166II GTNNAC 3 cut(s) 244, 642, 757
Hpy188I TCNGA 7 cut(s) 83, 107, 496, 651, 712, 900, 1277
Hpy188III TCNNGA 9 cut(s) 412, 485, 679, 769, 860, 1028, 1076, 1178, 1294
Hpy8I GTNNAC 3 cut(s) 244, 642, 757
HpyAV CCTTC 2 cut(s) 619, 847
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 1 cut(s) 702
HpyF10VI GCNNNNNNNGC 2 cut(s) 391, 526
HpySE526I ACGT 1 cut(s) 702
Hsp92II CATG 9 cut(s) 36, 252, 275, 350, 488, 961, 1031, 1234, 1346
HspAI GCGC 1 cut(s) 257
Kpn2I TCCGGA 1 cut(s) 859
Kzo9I GATC 4 cut(s) 670, 856, 1151, 1204
LmnI GCTCC 2 cut(s) 771, 862
Lsp1109I GCAGC 4 cut(s) 394, 425, 473, 1082
LweI GCATC 3 cut(s) 244, 1057, 1252
MaeI CTAG 1 cut(s) 788
MaeII ACGT 1 cut(s) 702
MaeIII GTNAC 3 cut(s) 39, 332, 1317
MalI GATC 4 cut(s) 672, 858, 1153, 1206
MboI GATC 4 cut(s) 670, 856, 1151, 1204
MboII GAAGA 7 cut(s) 43, 60, 465, 943, 1085, 1166, 1248
MfeI CAATTG 1 cut(s) 502
MflI RGATCY 2 cut(s) 856, 1151
MlyI GAGTC 3 cut(s) 605, 647, 1325
MmeI TCCRAC 1 cut(s) 1300
Mph1103I ATGCAT 1 cut(s) 1089
MroI TCCGGA 1 cut(s) 859
MseI TTAA 3 cut(s) 474, 687, 744
MspI CCGG 3 cut(s) 214, 658, 860
MspR9I CCNGG 4 cut(s) 418, 590, 946, 1142
MunI CAATTG 1 cut(s) 502
Mva1269I GAATGC 1 cut(s) 1245
MvaI CCWGG 4 cut(s) 418, 590, 946, 1142
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 2 cut(s) 391, 526
NcoI CCATGG 1 cut(s) 1230
NdeI CATATG 1 cut(s) 1250
NdeII GATC 4 cut(s) 670, 856, 1151, 1204
NheI GCTAGC 1 cut(s) 787
NlaIII CATG 9 cut(s) 36, 252, 275, 350, 488, 961, 1031, 1234, 1346
NlaIV GGNNCC 3 cut(s) 136, 836, 858
NmuCI GTSAC 2 cut(s) 332, 1317
NsiI ATGCAT 1 cut(s) 1089
NspI RCATGY 4 cut(s) 36, 252, 275, 961
PaeR7I CTCGAG 1 cut(s) 1292
PagI TCATGA 2 cut(s) 484, 1027
PciI ACATGT 2 cut(s) 32, 248
PctI GAATGC 1 cut(s) 1245
PfeI GAWTC 5 cut(s) 84, 421, 497, 548, 970
PkrI GCNGC 4 cut(s) 384, 440, 463, 1072
PleI GAGTC 3 cut(s) 604, 646, 1324
PpsI GAGTC 3 cut(s) 604, 646, 1324
PscI ACATGT 2 cut(s) 32, 248
PshBI ATTAAT 1 cut(s) 744
PsiI TTATAA 1 cut(s) 326
Psp1406I AACGTT 1 cut(s) 702
Psp6I CCWGG 4 cut(s) 416, 588, 944, 1140
PspFI CCCAGC 1 cut(s) 791
PspGI CCWGG 4 cut(s) 416, 588, 944, 1140
PspN4I GGNNCC 3 cut(s) 136, 836, 858
PspPI GGNCC 1 cut(s) 757
PstI CTGCAG 1 cut(s) 1135
PsuI RGATCY 2 cut(s) 856, 1151
RsaI GTAC 1 cut(s) 541
RsaNI GTAC 1 cut(s) 540
SaqAI TTAA 3 cut(s) 474, 687, 744
SatI GCNGC 4 cut(s) 383, 439, 462, 1071
Sau3AI GATC 4 cut(s) 670, 856, 1151, 1204
Sau96I GGNCC 1 cut(s) 757
SchI GAGTC 3 cut(s) 605, 647, 1325
ScrFI CCNGG 4 cut(s) 418, 590, 946, 1142
SfaNI GCATC 3 cut(s) 244, 1057, 1252
SfcI CTRYAG 1 cut(s) 1131
Sfr274I CTCGAG 1 cut(s) 1292
SinI GGWCC 1 cut(s) 757
SlaI CTCGAG 1 cut(s) 1292
SmlI CTYRAG 1 cut(s) 1292
SmoI CTYRAG 1 cut(s) 1292
SsiI CCGC 1 cut(s) 122
SspI AATATT 1 cut(s) 555
SspMI CTAG 1 cut(s) 788
StyD4I CCNGG 4 cut(s) 416, 588, 944, 1140
StyI CCWWGG 2 cut(s) 543, 1230
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 1 cut(s) 705
TaqI TCGA 6 cut(s) 413, 599, 830, 1077, 1207, 1293
TfiI GAWTC 5 cut(s) 84, 421, 497, 548, 970
Tru1I TTAA 3 cut(s) 474, 687, 744
Tru9I TTAA 3 cut(s) 474, 687, 744
TseFI GTSAC 2 cut(s) 332, 1317
TseI GCWGC 4 cut(s) 382, 438, 461, 1070
Tsp45I GTSAC 2 cut(s) 332, 1317
TspDTI ATGAA 9 cut(s) 7, 43, 333, 473, 638, 884, 1044, 1059, 1331
VpaK11BI GGWCC 1 cut(s) 757
VspI ATTAAT 1 cut(s) 744
XagI CCTNNNNNAGG 1 cut(s) 129
XapI RAATTY 6 cut(s) 287, 692, 901, 1046, 1302, 1328
XceI RCATGY 4 cut(s) 36, 252, 275, 961
XhoI CTCGAG 1 cut(s) 1292
XmiI GTMKAC 1 cut(s) 243
XspI CTAG 1 cut(s) 788
Zsp2I ATGCAT 1 cut(s) 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.