Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49340269 .. 49345501

Gene Structure 5233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG266900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGATGCCCACAAACACATATAGGCAAATATGGCTGCCCCGAATCCGAGCTGAGGCCGGCTCAAGTACCTATTTTGGAGCGCAAGGTTCAACTCTTCTGTTTTACACATTTCCCATTATGTTCATTGCTGTGATGGGTTGTGTGTATCTCCATCTGGGAAAGAAGATTACTGATTATAAAATCGAAAGTGAAGGCAAAACGAACCGTATAGCTGTGTGGAAACAGCCCATGCTGGTGAAAGGTCCTTTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTCATTGCACTCCTAATTTGGTCTATCTCCACGTACTTGACCAATGGTTTTAAGATAATCACACCACAATCCGCCGCAAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGAGAGTGCATCATTGAGGCTAGGGGTTGTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTCGCTCGTGGCTCCTCGATCTTGCCTCTGTTTGGCCTCACCTCCGAGGCTAGCATCAAGTACCATATATGGGTAGGAAACATACTAATGGTGCTCTTTACAGCTCATGGAACTTGTTACATCATATATTGGGCTGTCACAGATCAAATTTCCCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCGGGAGAGCTAGCTTTGCTCTCTGGACTTGCCCTGTGGGTGGCTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCCGTTCATGGTCTTCTTCATCTTTCATGTCGGTGTCGGCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCATGGTTGATCGTTACCTACGATTCTTGCAATCCGAGAGAAGAGCACGTTTAGTCTCTGCCCGAATCTTGCCGGGTGAATCTCTAGAACTCAACTTTGCCAAAAGTCCGGGTTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTACACTGTTACTTCAAACAGTAACTTGGAGCCAGAGAAGATCAGTGTCGTCATTAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCGTCGCCTTCTACAAGTGCTCGGATTGAGGCTGCTGTTGAAGGACCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATTCGCGAGCTTATTTTTATGTCCACGGCCTTCCAATCCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTTAAACACTCTTCGGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGACATATGTAACAAGAGACACACAGCCAAAAGATAACTCAATGAACCTCGGAAGCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGACCAAACCACTGGCTCTGGCTTGGCCTGATCATAACATCTTCCTTCATGATGTTCCTCATCTTGATTGGGATCGTCACCAGATATTACATTTTTCCGATCGATCACAACTCCAATAAGATTTTTTCGTCTCCTTTGAGGGCTTTGTTTAATATGTTGGCTATATGCATGTCCATAGCGGCAACAGCTAGTGCAGCAATGTTGTGGAACAAGGGAAGTAATGCCAAGGAGTTAAAGCAGGTTCAGCACATAGAAGCCTCACCACCAAGGGGTTCAGAGGTTTATAATGCAGAAAGAGAGTTAGAAAGCCTTCCTCAACAGTCCCTTGTCCAAGCCACCAATGTGCACTATGGTCAAAGGCCTGACCTCAAGAGGATTCTATTTGAGTGCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

654

Amino Acids

73.42

Weight (kDa)

9.44

Isoelectric Point (pI)

41.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	140 - 260	2.6e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	294 - 391	3.7e-23	FAD-binding domain
NAD_binding_6	PF08030	398 - 653	8.3e-19	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	177, 1800
Acc36I	ACCTGC	1 cut(s)	1744
AccI	GTMKAC	1 cut(s)	1367
AccII	CGCG	1 cut(s)	1254
AciI	CCGC	4 cut(s)	360, 363, 656, 1694
AclWI	GGATC	2 cut(s)	1595, 1918
AcsI	RAATTY	1 cut(s)	609
AfaI	GTAC	3 cut(s)	67, 323, 524
AfiI	CCNNNNNNNGG	7 cut(s)	52, 494, 532, 694, 769, 838, 1784
AgsI	TTSAA	5 cut(s)	90, 952, 1032, 1154, 1477
AjnI	CCWGG	2 cut(s)	820, 1091
AjuI	GAANNNNNNNTTGG	2 cut(s)	1275, 1307
AleI	CACNNNNGTG	1 cut(s)	1856
Alw21I	GWGCWC	6 cut(s)	273, 558, 735, 883, 1135, 1863
Alw26I	GTCTC	4 cut(s)	895, 1406, 1422, 1650
Alw44I	GTGCAC	1 cut(s)	1859
AlwI	GGATC	2 cut(s)	1595, 1918
AoxI	GGCC	5 cut(s)	54, 496, 1275, 1540, 1874
ApaLI	GTGCAC	1 cut(s)	1859
ApeKI	GCWGC	4 cut(s)	34, 1003, 1145, 1709
ApoI	RAATTY	1 cut(s)	609
Asp700I	GAANNNNTTC	1 cut(s)	1824
AspLEI	GCGC	2 cut(s)	82, 720
AspS9I	GGNCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
AsuC2I	CCSGG	2 cut(s)	909, 945
AsuHPI	GGTGA	8 cut(s)	247, 265, 493, 923, 1088, 1222, 1585, 1767
AsuNHI	GCTAGC	2 cut(s)	512, 664
AvaII	GGWCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
BaeGI	GKGCMC	1 cut(s)	1863
BanII	GRGCYC	2 cut(s)	273, 735
BauI	CACGAG	1 cut(s)	468
BbsI	GAAGAC	1 cut(s)	766
Bbv12I	GWGCWC	6 cut(s)	273, 558, 735, 883, 1135, 1863
BbvCI	CCTCAGC	1 cut(s)	51
BbvI	GCAGC	4 cut(s)	21, 990, 1132, 1721
BccI	CCATC	2 cut(s)	127, 159
BceAI	ACGGC	1 cut(s)	1290
BciT130I	CCWGG	2 cut(s)	822, 1093
BclI	TGATCA	1 cut(s)	1545
BcnI	CCSGG	2 cut(s)	909, 945
BcoDI	GTCTC	4 cut(s)	895, 1406, 1422, 1650
BfaI	CTAG	8 cut(s)	419, 513, 665, 920, 990, 1346, 1704, 1932
BfuAI	ACCTGC	1 cut(s)	1744
BisI	GCNGC	6 cut(s)	35, 363, 1004, 1146, 1695, 1710
BlsI	GCNGC	6 cut(s)	36, 364, 1005, 1147, 1696, 1711
Bme1390I	CCNGG	4 cut(s)	822, 909, 945, 1093
Bme18I	GGWCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
BmgT120I	GGNCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
BmiI	GGNNCC	3 cut(s)	475, 1047, 1518
BmrFI	CCNGG	4 cut(s)	822, 909, 945, 1093
BmsI	GCATC	4 cut(s)	416, 525, 1021, 1162
BmtI	GCTAGC	2 cut(s)	516, 668
BpiI	GAAGAC	1 cut(s)	766
BplI	GAGNNNNNCTC	2 cut(s)	44, 76
BpmI	CTGGAG	1 cut(s)	1382
Bpu10I	CCTNAGC	1 cut(s)	51
BpuEI	CTTGAG	2 cut(s)	46, 1868
BpuMI	CCSGG	2 cut(s)	909, 945
Bsa29I	ATCGAT	1 cut(s)	1617
BsaAI	YACGTR	1 cut(s)	321
BsaBI	GATNNNNATC	1 cut(s)	1586
BsaJI	CCNNGG	6 cut(s)	507, 820, 1272, 1459, 1740, 1781
BsaWI	WCCGGW	1 cut(s)	460
Bsc4I	CCNNNNNNNGG	7 cut(s)	52, 494, 532, 694, 769, 838, 1784
Bse118I	RCCGGY	1 cut(s)	56
Bse1I	ACTGG	2 cut(s)	643, 1532
Bse3DI	GCAATG	4 cut(s)	123, 291, 1013, 1719
Bse8I	GATNNNNATC	1 cut(s)	1586
BseBI	CCWGG	2 cut(s)	822, 1093
BseCI	ATCGAT	1 cut(s)	1617
BseDI	CCNNGG	6 cut(s)	507, 820, 1272, 1459, 1740, 1781
BseGI	GGATG	2 cut(s)	759, 1012
BseJI	GATNNNNATC	1 cut(s)	1586
BseLI	CCNNNNNNNGG	7 cut(s)	52, 494, 532, 694, 769, 838, 1784
BseMI	GCAATG	4 cut(s)	123, 291, 1013, 1719
BseMII	CTCAG	1 cut(s)	42
BseNI	ACTGG	2 cut(s)	643, 1532
BseRI	GAGGAG	1 cut(s)	466
BseSI	GKGCMC	1 cut(s)	1863
BseXI	GCAGC	4 cut(s)	21, 990, 1132, 1721
BsgI	GTGCAG	1 cut(s)	1728
Bsh1236I	CGCG	1 cut(s)	1254
Bsh1285I	CGRYCG	2 cut(s)	465, 1617
BshFI	GGCC	5 cut(s)	56, 498, 1277, 1542, 1876
BshVI	ATCGAT	1 cut(s)	1617
BsiEI	CGRYCG	2 cut(s)	465, 1617
BsiHKAI	GWGCWC	6 cut(s)	273, 558, 735, 883, 1135, 1863
BsiSI	CCGG	4 cut(s)	57, 461, 908, 944
BslFI	GGGAC	2 cut(s)	1530, 1822
BslI	CCNNNNNNNGG	7 cut(s)	52, 494, 532, 694, 769, 838, 1784
BsmAI	GTCTC	4 cut(s)	895, 1406, 1422, 1650
BsmBI	CGTCTC	1 cut(s)	1650
BsmFI	GGGAC	2 cut(s)	1530, 1822
BsnI	GGCC	5 cut(s)	56, 498, 1277, 1542, 1876
Bsp1286I	GDGCHC	6 cut(s)	273, 558, 735, 883, 1135, 1863
Bsp143I	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
Bsp68I	TCGCGA	1 cut(s)	1254
BspACI	CCGC	4 cut(s)	360, 363, 656, 1694
BspANI	GGCC	5 cut(s)	56, 498, 1277, 1542, 1876
BspCNI	CTCAG	1 cut(s)	43
BspDI	ATCGAT	1 cut(s)	1617
BspFNI	CGCG	1 cut(s)	1254
BspHI	TCATGA	1 cut(s)	1563
BspLI	GGNNCC	3 cut(s)	475, 1047, 1518
BspMI	ACCTGC	1 cut(s)	1744
BspOI	GCTAGC	2 cut(s)	516, 668
BspPI	GGATC	2 cut(s)	1595, 1918
BspQI	GCTCTTC	2 cut(s)	740, 871
BsrDI	GCAATG	4 cut(s)	123, 291, 1013, 1719
BsrFI	RCCGGY	1 cut(s)	56
BsrI	ACTGG	2 cut(s)	643, 1532
BssAI	RCCGGY	1 cut(s)	56
BssECI	CCNNGG	6 cut(s)	507, 820, 1272, 1459, 1740, 1781
BssMI	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
BssSI	CACGAG	1 cut(s)	468
BssT1I	CCWWGG	2 cut(s)	1740, 1781
Bst2BI	CACGAG	1 cut(s)	468
Bst2UI	CCWGG	2 cut(s)	822, 1093
Bst4CI	ACNGT	4 cut(s)	206, 1024, 1037, 1836
Bst6I	CTCTTC	6 cut(s)	99, 458, 740, 839, 871, 1333
BstBAI	YACGTR	1 cut(s)	321
BstC8I	GCNNGC	5 cut(s)	58, 514, 666, 808, 1256
BstDEI	CTNAG	2 cut(s)	51, 1187
BstDSI	CCRYGG	1 cut(s)	1272
BstF5I	GGATG	2 cut(s)	759, 1012
BstFNI	CGCG	1 cut(s)	1254
BstHHI	GCGC	2 cut(s)	82, 720
BstKTI	GATC	9 cut(s)	483, 607, 847, 1059, 1548, 1590, 1617, 1621, 1913
BstMAI	GTCTC	4 cut(s)	895, 1406, 1422, 1650
BstMBI	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
BstMCI	CGRYCG	2 cut(s)	465, 1617
BstMWI	GCNNNNNNNGC	8 cut(s)	31, 670, 717, 807, 1009, 1700, 1709, 1759
BstNI	CCWGG	2 cut(s)	822, 1093
BstNSI	RCATGY	1 cut(s)	1687
BstSCI	CCNGG	4 cut(s)	820, 907, 943, 1091
BstSLI	GKGCMC	1 cut(s)	1863
BstUI	CGCG	1 cut(s)	1254
BstV1I	GCAGC	4 cut(s)	21, 990, 1132, 1721
BstV2I	GAAGAC	1 cut(s)	766
BstXI	CCANNNNNNTGG	1 cut(s)	1527
Bsu15I	ATCGAT	1 cut(s)	1617
BsuRI	GGCC	5 cut(s)	56, 498, 1277, 1542, 1876
BsuTUI	ATCGAT	1 cut(s)	1617
BtgI	CCRYGG	1 cut(s)	1272
BtsCI	GGATG	2 cut(s)	759, 1012
BtsI	GCAGTG	1 cut(s)	1228
BtsIMutI	CAGTG	4 cut(s)	1020, 1066, 1228, 1525
BtuMI	TCGCGA	1 cut(s)	1254
BveI	ACCTGC	1 cut(s)	1744
Cac8I	GCNNGC	5 cut(s)	58, 514, 666, 808, 1256
CciI	TCATGA	1 cut(s)	1563
CfoI	GCGC	2 cut(s)	82, 720
Cfr10I	RCCGGY	1 cut(s)	56
Cfr13I	GGNCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
ClaI	ATCGAT	1 cut(s)	1617
CseI	GACGC	1 cut(s)	958
Csp6I	GTAC	3 cut(s)	66, 322, 523
CviQI	GTAC	3 cut(s)	66, 322, 523
DdeI	CTNAG	2 cut(s)	51, 1187
DpnI	GATC	9 cut(s)	482, 606, 846, 1058, 1547, 1589, 1616, 1620, 1912
DpnII	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
DraI	TTTAAA	1 cut(s)	1321
Eam1104I	CTCTTC	6 cut(s)	99, 458, 740, 839, 871, 1333
EarI	CTCTTC	6 cut(s)	99, 458, 740, 839, 871, 1333
EciI	GGCGGA	1 cut(s)	349
Ecl136II	GAGCTC	2 cut(s)	271, 733
Eco130I	CCWWGG	2 cut(s)	1740, 1781
Eco147I	AGGCCT	1 cut(s)	1876
Eco24I	GRGCYC	2 cut(s)	273, 735
Eco47I	GGWCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
Eco53kI	GAGCTC	2 cut(s)	271, 733
EcoICRI	GAGCTC	2 cut(s)	271, 733
EcoO109I	RGGNCCY	2 cut(s)	242, 1157
EcoRII	CCWGG	2 cut(s)	820, 1091
EcoT14I	CCWWGG	2 cut(s)	1740, 1781
EcoT22I	ATGCAT	1 cut(s)	1685
EcoT38I	GRGCYC	2 cut(s)	273, 735
ErhI	CCWWGG	2 cut(s)	1740, 1781
Esp3I	CGTCTC	1 cut(s)	1650
FaqI	GGGAC	2 cut(s)	1530, 1822
FauI	CCCGC	1 cut(s)	649
FauNDI	CATATG	4 cut(s)	437, 1381, 1417, 1469
FbaI	TGATCA	1 cut(s)	1545
FblI	GTMKAC	1 cut(s)	1367
Fnu4HI	GCNGC	6 cut(s)	35, 363, 1004, 1146, 1695, 1710
FokI	GGATG	2 cut(s)	746, 999
FriOI	GRGCYC	2 cut(s)	273, 735
Fsp4HI	GCNGC	6 cut(s)	35, 363, 1004, 1146, 1695, 1710
FspBI	CTAG	8 cut(s)	419, 513, 665, 920, 990, 1346, 1704, 1932
GlaI	GCGC	2 cut(s)	81, 719
GluI	GCNGC	6 cut(s)	35, 363, 1004, 1146, 1695, 1710
GsuI	CTGGAG	1 cut(s)	1382
HaeIII	GGCC	5 cut(s)	56, 498, 1277, 1542, 1876
HapII	CCGG	4 cut(s)	57, 461, 908, 944
HgaI	GACGC	1 cut(s)	958
HhaI	GCGC	2 cut(s)	82, 720
Hin6I	GCGC	2 cut(s)	80, 718
HinP1I	GCGC	2 cut(s)	80, 718
HindIII	AAGCTT	2 cut(s)	1097, 1289
HinfI	GANTC	6 cut(s)	42, 858, 900, 914, 1354, 1891
HpaII	CCGG	4 cut(s)	57, 461, 908, 944
HphI	GGTGA	8 cut(s)	247, 265, 493, 923, 1088, 1222, 1585, 1767
Hpy166II	GTNNAC	4 cut(s)	1272, 1368, 1861, 1937
Hpy188I	TCNGA	9 cut(s)	47, 508, 871, 1137, 1296, 1333, 1463, 1614, 1792
Hpy188III	TCNNGA	7 cut(s)	678, 920, 1253, 1399, 1564, 1579, 1885
Hpy8I	GTNNAC	4 cut(s)	1272, 1368, 1861, 1937
Hpy99I	CGWCG	1 cut(s)	1120
HpyAV	CCTTC	8 cut(s)	185, 286, 1073, 1131, 1148, 1288, 1570, 1835
HpyCH4III	ACNGT	4 cut(s)	206, 1024, 1037, 1836
HpyCH4IV	ACGT	2 cut(s)	320, 883
HpyF10VI	GCNNNNNNNGC	8 cut(s)	31, 670, 717, 807, 1009, 1700, 1709, 1759
HpyF3I	CTNAG	2 cut(s)	51, 1187
HpySE526I	ACGT	2 cut(s)	320, 883
HspAI	GCGC	2 cut(s)	80, 718
KroI	GCCGGC	1 cut(s)	56
KroNI	GCCGGC	1 cut(s)	58
Ksp22I	TGATCA	1 cut(s)	1545
Kzo9I	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
LguI	GCTCTTC	2 cut(s)	740, 871
LmnI	GCTCC	4 cut(s)	77, 479, 822, 1045
Lsp1109I	GCAGC	4 cut(s)	21, 990, 1132, 1721
LweI	GCATC	4 cut(s)	416, 525, 1021, 1162
MaeI	CTAG	8 cut(s)	419, 513, 665, 920, 990, 1346, 1704, 1932
MaeII	ACGT	2 cut(s)	320, 883
MaeIII	GTNAC	9 cut(s)	431, 578, 598, 848, 1024, 1037, 1300, 1420, 1591
MalI	GATC	9 cut(s)	482, 606, 846, 1058, 1547, 1589, 1616, 1620, 1912
MboI	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
MhlI	GDGCHC	6 cut(s)	273, 558, 735, 883, 1135, 1863
MluCI	AATT	5 cut(s)	303, 395, 609, 1248, 1407
MmeI	TCCRAC	2 cut(s)	986, 1067
Mph1103I	ATGCAT	1 cut(s)	1685
MroNI	GCCGGC	1 cut(s)	56
MroXI	GAANNNNTTC	1 cut(s)	1824
MseI	TTAA	6 cut(s)	339, 1071, 1307, 1320, 1665, 1748
MslI	CAYNNNNRTG	6 cut(s)	128, 233, 548, 792, 983, 1856
MspI	CCGG	4 cut(s)	57, 461, 908, 944
MspR9I	CCNGG	4 cut(s)	822, 909, 945, 1093
MvaI	CCWGG	2 cut(s)	822, 1093
MvnI	CGCG	1 cut(s)	1254
MwoI	GCNNNNNNNGC	8 cut(s)	31, 670, 717, 807, 1009, 1700, 1709, 1759
NaeI	GCCGGC	1 cut(s)	58
NciI	CCSGG	2 cut(s)	909, 945
NdeI	CATATG	4 cut(s)	437, 1381, 1417, 1469
NdeII	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
NgoMIV	GCCGGC	1 cut(s)	56
NheI	GCTAGC	2 cut(s)	512, 664
NlaIV	GGNNCC	3 cut(s)	475, 1047, 1518
NmuCI	GTSAC	3 cut(s)	598, 1300, 1591
NruI	TCGCGA	1 cut(s)	1254
NsiI	ATGCAT	1 cut(s)	1685
NspI	RCATGY	1 cut(s)	1687
OliI	CACNNNNGTG	1 cut(s)	1856
PagI	TCATGA	1 cut(s)	1563
PceI	AGGCCT	1 cut(s)	1876
PciSI	GCTCTTC	2 cut(s)	740, 871
PcsI	WCGNNNNNNNCGW	1 cut(s)	853
PdiI	GCCGGC	1 cut(s)	58
PdmI	GAANNNNTTC	1 cut(s)	1824
PfeI	GAWTC	6 cut(s)	42, 858, 900, 914, 1354, 1891
PkrI	GCNGC	6 cut(s)	36, 364, 1005, 1147, 1696, 1711
Ple19I	CGATCG	1 cut(s)	1617
Ppu21I	YACGTR	1 cut(s)	321
PpuMI	RGGWCCY	2 cut(s)	242, 1157
PsiI	TTATAA	2 cut(s)	177, 1800
Psp124BI	GAGCTC	2 cut(s)	273, 735
Psp5II	RGGWCCY	2 cut(s)	242, 1157
Psp6I	CCWGG	2 cut(s)	820, 1091
PspGI	CCWGG	2 cut(s)	820, 1091
PspN4I	GGNNCC	3 cut(s)	475, 1047, 1518
PspPI	GGNCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
PspPPI	RGGWCCY	2 cut(s)	242, 1157
PvuI	CGATCG	1 cut(s)	1617
RruI	TCGCGA	1 cut(s)	1254
RsaI	GTAC	3 cut(s)	67, 323, 524
RsaNI	GTAC	3 cut(s)	66, 322, 523
RseI	CAYNNNNRTG	6 cut(s)	128, 233, 548, 792, 983, 1856
SacI	GAGCTC	2 cut(s)	273, 735
SapI	GCTCTTC	2 cut(s)	740, 871
SaqAI	TTAA	6 cut(s)	339, 1071, 1307, 1320, 1665, 1748
SatI	GCNGC	6 cut(s)	35, 363, 1004, 1146, 1695, 1710
Sau3AI	GATC	9 cut(s)	480, 604, 844, 1056, 1545, 1587, 1614, 1618, 1910
Sau96I	GGNCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
ScrFI	CCNGG	4 cut(s)	822, 909, 945, 1093
SduI	GDGCHC	6 cut(s)	273, 558, 735, 883, 1135, 1863
SfaNI	GCATC	4 cut(s)	416, 525, 1021, 1162
SinI	GGWCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
SmiMI	CAYNNNNRTG	6 cut(s)	128, 233, 548, 792, 983, 1856
SmlI	CTYRAG	2 cut(s)	61, 1883
SmoI	CTYRAG	2 cut(s)	61, 1883
Sse9I	AATT	5 cut(s)	303, 395, 609, 1248, 1407
SseBI	AGGCCT	1 cut(s)	1876
SsiI	CCGC	4 cut(s)	360, 363, 656, 1694
SspMI	CTAG	8 cut(s)	419, 513, 665, 920, 990, 1346, 1704, 1932
SstI	GAGCTC	2 cut(s)	273, 735
StuI	AGGCCT	1 cut(s)	1876
StyD4I	CCNGG	4 cut(s)	820, 907, 943, 1091
StyI	CCWWGG	2 cut(s)	1740, 1781
TaaI	ACNGT	4 cut(s)	206, 1024, 1037, 1836
TaiI	ACGT	2 cut(s)	323, 886
TaqI	TCGA	3 cut(s)	183, 479, 1617
TaqII	GACCGA	1 cut(s)	1954
TasI	AATT	5 cut(s)	303, 395, 609, 1248, 1407
TauI	GCSGC	2 cut(s)	365, 1697
TfiI	GAWTC	6 cut(s)	42, 858, 900, 914, 1354, 1891
Tru1I	TTAA	6 cut(s)	339, 1071, 1307, 1320, 1665, 1748
Tru9I	TTAA	6 cut(s)	339, 1071, 1307, 1320, 1665, 1748
TscAI	CASTG	4 cut(s)	1027, 1066, 1228, 1532
TseFI	GTSAC	3 cut(s)	598, 1300, 1591
TseI	GCWGC	4 cut(s)	34, 1003, 1145, 1709
Tsp45I	GTSAC	3 cut(s)	598, 1300, 1591
TspRI	CASTG	4 cut(s)	1027, 1066, 1228, 1532
VneI	GTGCAC	1 cut(s)	1859
VpaK11BI	GGWCC	7 cut(s)	242, 1089, 1157, 1166, 1333, 1517, 1937
XapI	RAATTY	1 cut(s)	609
XbaI	TCTAGA	1 cut(s)	919
XceI	RCATGY	1 cut(s)	1687
XmiI	GTMKAC	1 cut(s)	1367
XmnI	GAANNNNTTC	1 cut(s)	1824
XspI	CTAG	8 cut(s)	419, 513, 665, 920, 990, 1346, 1704, 1932
Zsp2I	ATGCAT	1 cut(s)	1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.