Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49333909 .. 49337491

Gene Structure 3583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG266800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGCAGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAGGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCGAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTCTTTGGCCTCAACTCTGAGGCTAGCATCAAGTACCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCTAACATAGCTGGAGAGATAGCTTTGCTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTATACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTCGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGTTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTTCTTCAAACAGTAATTTGGAGTCAGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCCATTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATCGAGCACAGTTCCTATAAAATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCGGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCGAAGGAGTTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCGAGGGGTTCGGAGGTTTATAATGCAGAAAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCTAGCGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

632

Amino Acids

71.24

Weight (kDa)

9.39

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	97 - 217	3.6e-21	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	251 - 348	9.6e-23	FAD-binding domain
NAD_binding_6	PF08030	355 - 615	3.3e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1671
Acc36I	ACCTGC	1 cut(s)	1615
AccI	GTMKAC	1 cut(s)	1238
AccII	CGCG	3 cut(s)	233, 754, 1125
AciI	CCGC	4 cut(s)	231, 233, 1123, 1565
AclWI	GGATC	1 cut(s)	1789
AcsI	RAATTY	2 cut(s)	444, 1506
AcuI	CTGAAG	1 cut(s)	1185
AcyI	GRCGYC	1 cut(s)	666
AfaI	GTAC	3 cut(s)	38, 194, 395
AfiI	CCNNNNNNNGG	4 cut(s)	23, 365, 640, 709
AgsI	TTSAA	7 cut(s)	34, 823, 903, 1025, 1192, 1348, 1777
AjnI	CCWGG	4 cut(s)	691, 708, 740, 962
AjuI	GAANNNNNNNTTGG	2 cut(s)	1146, 1178
Alw21I	GWGCWC	5 cut(s)	144, 429, 606, 1494, 1734
Alw26I	GTCTC	4 cut(s)	673, 766, 1293, 1713
Alw44I	GTGCAC	1 cut(s)	1730
AlwI	GGATC	1 cut(s)	1789
Ama87I	CYCGRG	3 cut(s)	768, 815, 1769
AoxI	GGCC	5 cut(s)	25, 367, 1028, 1146, 1411
ApaLI	GTGCAC	1 cut(s)	1730
ApeKI	GCWGC	3 cut(s)	874, 1016, 1580
ApoI	RAATTY	2 cut(s)	444, 1506
Asp700I	GAANNNNTTC	1 cut(s)	1695
AspLEI	GCGC	3 cut(s)	591, 754, 1391
AspS9I	GGNCC	5 cut(s)	113, 960, 1028, 1037, 1808
AsuC2I	CCSGG	3 cut(s)	780, 816, 817
AsuHPI	GGTGA	8 cut(s)	118, 136, 794, 796, 959, 1093, 1456, 1641
AsuNHI	GCTAGC	1 cut(s)	383
AvaI	CYCGRG	3 cut(s)	768, 815, 1769
AvaII	GGWCC	4 cut(s)	113, 960, 1037, 1808
BaeGI	GKGCMC	1 cut(s)	1734
BanII	GRGCYC	3 cut(s)	144, 606, 1531
BauI	CACGAG	1 cut(s)	339
BbsI	GAAGAC	1 cut(s)	637
Bbv12I	GWGCWC	5 cut(s)	144, 429, 606, 1494, 1734
BbvI	GCAGC	3 cut(s)	861, 1003, 1592
BccI	CCATC	1 cut(s)	1889
BceAI	ACGGC	2 cut(s)	79, 1161
BciT130I	CCWGG	4 cut(s)	693, 710, 742, 964
BcnI	CCSGG	3 cut(s)	780, 816, 817
BcoDI	GTCTC	4 cut(s)	673, 766, 1293, 1713
BfmI	CTRYAG	1 cut(s)	1017
BfuAI	ACCTGC	1 cut(s)	1615
BisI	GCNGC	5 cut(s)	234, 875, 1017, 1566, 1581
BlsI	GCNGC	5 cut(s)	235, 876, 1018, 1567, 1582
Bme1390I	CCNGG	7 cut(s)	693, 710, 742, 780, 816, 817, 964
Bme18I	GGWCC	4 cut(s)	113, 960, 1037, 1808
BmeT110I	CYCGRG	3 cut(s)	768, 815, 1769
BmgT120I	GGNCC	5 cut(s)	113, 960, 1028, 1037, 1808
BmiI	GGNNCC	1 cut(s)	114
BmrFI	CCNGG	7 cut(s)	693, 710, 742, 780, 816, 817, 964
BmsI	GCATC	5 cut(s)	287, 396, 892, 1033, 1433
BmtI	GCTAGC	1 cut(s)	387
BpiI	GAAGAC	1 cut(s)	637
BpmI	CTGGAG	2 cut(s)	549, 1253
BpuEI	CTTGAG	1 cut(s)	1739
BpuMI	CCSGG	3 cut(s)	780, 816, 817
BsaAI	YACGTR	1 cut(s)	192
BsaBI	GATNNNNATC	1 cut(s)	1457
BsaHI	GRCGYC	1 cut(s)	666
BsaI	GGTCTC	1 cut(s)	766
BsaJI	CCNNGG	6 cut(s)	22, 231, 691, 815, 1143, 1652
BsaWI	WCCGGW	1 cut(s)	331
Bsc4I	CCNNNNNNNGG	4 cut(s)	23, 365, 640, 709
Bse1I	ACTGG	2 cut(s)	514, 1403
Bse3DI	GCAATG	1 cut(s)	884
Bse8I	GATNNNNATC	1 cut(s)	1457
BseBI	CCWGG	4 cut(s)	693, 710, 742, 964
BseDI	CCNNGG	6 cut(s)	22, 231, 691, 815, 1143, 1652
BseGI	GGATG	4 cut(s)	10, 570, 630, 883
BseJI	GATNNNNATC	1 cut(s)	1457
BseLI	CCNNNNNNNGG	4 cut(s)	23, 365, 640, 709
BseMI	GCAATG	1 cut(s)	884
BseMII	CTCAG	2 cut(s)	369, 1345
BseNI	ACTGG	2 cut(s)	514, 1403
BseSI	GKGCMC	1 cut(s)	1734
BseXI	GCAGC	3 cut(s)	861, 1003, 1592
BsgI	GTGCAG	1 cut(s)	1599
Bsh1236I	CGCG	3 cut(s)	233, 754, 1125
Bsh1285I	CGRYCG	2 cut(s)	718, 1488
BshFI	GGCC	5 cut(s)	27, 369, 1030, 1148, 1413
BsiEI	CGRYCG	2 cut(s)	718, 1488
BsiHKAI	GWGCWC	5 cut(s)	144, 429, 606, 1494, 1734
BsiHKCI	CYCGRG	3 cut(s)	768, 815, 1769
BsiSI	CCGG	3 cut(s)	332, 779, 816
BslFI	GGGAC	1 cut(s)	798
BslI	CCNNNNNNNGG	4 cut(s)	23, 365, 640, 709
BsmAI	GTCTC	4 cut(s)	673, 766, 1293, 1713
BsmBI	CGTCTC	1 cut(s)	673
BsmFI	GGGAC	1 cut(s)	798
BsmI	GAATGC	1 cut(s)	1187
BsnI	GGCC	5 cut(s)	27, 369, 1030, 1148, 1413
Bso31I	GGTCTC	1 cut(s)	766
BsoBI	CYCGRG	3 cut(s)	768, 815, 1769
Bsp1286I	GDGCHC	6 cut(s)	144, 429, 606, 1494, 1531, 1734
Bsp143I	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
BspACI	CCGC	4 cut(s)	231, 233, 1123, 1565
BspANI	GGCC	5 cut(s)	27, 369, 1030, 1148, 1413
BspCNI	CTCAG	2 cut(s)	370, 1344
BspFNI	CGCG	3 cut(s)	233, 754, 1125
BspHI	TCATGA	1 cut(s)	1434
BspLI	GGNNCC	1 cut(s)	114
BspMAI	CTGCAG	1 cut(s)	1021
BspMI	ACCTGC	1 cut(s)	1615
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	1 cut(s)	1789
BspQI	GCTCTTC	4 cut(s)	233, 434, 611, 742
BspTNI	GGTCTC	1 cut(s)	766
BsrDI	GCAATG	1 cut(s)	884
BsrI	ACTGG	2 cut(s)	514, 1403
BssECI	CCNNGG	6 cut(s)	22, 231, 691, 815, 1143, 1652
BssMI	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
BssNI	GRCGYC	1 cut(s)	666
BssSI	CACGAG	1 cut(s)	339
BssT1I	CCWWGG	1 cut(s)	22
Bst2BI	CACGAG	1 cut(s)	339
Bst2UI	CCWGG	4 cut(s)	693, 710, 742, 964
Bst4CI	ACNGT	6 cut(s)	77, 206, 895, 908, 1496, 1707
Bst6I	CTCTTC	8 cut(s)	233, 329, 434, 611, 641, 710, 742, 1204
BstACI	GRCGYC	1 cut(s)	666
BstBAI	YACGTR	1 cut(s)	192
BstC8I	GCNNGC	4 cut(s)	385, 679, 1127, 1160
BstDEI	CTNAG	3 cut(s)	378, 1058, 1331
BstDSI	CCRYGG	2 cut(s)	231, 1143
BstF5I	GGATG	4 cut(s)	10, 570, 630, 883
BstFNI	CGCG	3 cut(s)	233, 754, 1125
BstHHI	GCGC	3 cut(s)	591, 754, 1391
BstKTI	GATC	6 cut(s)	478, 718, 930, 1006, 1488, 1784
BstMAI	GTCTC	4 cut(s)	673, 766, 1293, 1713
BstMBI	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
BstMCI	CGRYCG	2 cut(s)	718, 1488
BstMWI	GCNNNNNNNGC	6 cut(s)	63, 588, 880, 1571, 1580, 1630
BstNI	CCWGG	4 cut(s)	693, 710, 742, 964
BstSCI	CCNGG	7 cut(s)	691, 708, 740, 778, 814, 815, 962
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	1 cut(s)	1734
BstUI	CGCG	3 cut(s)	233, 754, 1125
BstV1I	GCAGC	3 cut(s)	861, 1003, 1592
BstV2I	GAAGAC	1 cut(s)	637
BstX2I	RGATCY	1 cut(s)	1781
BstYI	RGATCY	1 cut(s)	1781
BsuRI	GGCC	5 cut(s)	27, 369, 1030, 1148, 1413
BtgI	CCRYGG	2 cut(s)	231, 1143
BtgZI	GCGATG	1 cut(s)	972
BtsCI	GGATG	4 cut(s)	10, 570, 630, 883
BtsI	GCAGTG	3 cut(s)	64, 1099, 1590
BtsIMutI	CAGTG	6 cut(s)	64, 891, 937, 1099, 1396, 1590
BveI	ACCTGC	1 cut(s)	1615
Cac8I	GCNNGC	4 cut(s)	385, 679, 1127, 1160
CciI	TCATGA	1 cut(s)	1434
CfoI	GCGC	3 cut(s)	591, 754, 1391
Cfr13I	GGNCC	5 cut(s)	113, 960, 1028, 1037, 1808
Cfr42I	CCGCGG	1 cut(s)	234
Cfr9I	CCCGGG	1 cut(s)	815
CseI	GACGC	2 cut(s)	655, 829
Csp6I	GTAC	3 cut(s)	37, 193, 394
CviQI	GTAC	3 cut(s)	37, 193, 394
DdeI	CTNAG	3 cut(s)	378, 1058, 1331
DpnI	GATC	6 cut(s)	477, 717, 929, 1005, 1487, 1783
DpnII	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
Eam1104I	CTCTTC	8 cut(s)	233, 329, 434, 611, 641, 710, 742, 1204
EarI	CTCTTC	8 cut(s)	233, 329, 434, 611, 641, 710, 742, 1204
Ecl136II	GAGCTC	2 cut(s)	142, 604
Eco130I	CCWWGG	1 cut(s)	22
Eco24I	GRGCYC	3 cut(s)	144, 606, 1531
Eco31I	GGTCTC	1 cut(s)	766
Eco47I	GGWCC	4 cut(s)	113, 960, 1037, 1808
Eco53kI	GAGCTC	2 cut(s)	142, 604
Eco57I	CTGAAG	1 cut(s)	1185
Eco88I	CYCGRG	3 cut(s)	768, 815, 1769
EcoICRI	GAGCTC	2 cut(s)	142, 604
EcoO109I	RGGNCCY	2 cut(s)	113, 1028
EcoRII	CCWGG	4 cut(s)	691, 708, 740, 962
EcoT14I	CCWWGG	1 cut(s)	22
EcoT22I	ATGCAT	1 cut(s)	1872
EcoT38I	GRGCYC	3 cut(s)	144, 606, 1531
ErhI	CCWWGG	1 cut(s)	22
Esp3I	CGTCTC	1 cut(s)	673
FaqI	GGGAC	1 cut(s)	798
FauNDI	CATATG	4 cut(s)	308, 1252, 1288, 1340
FblI	GTMKAC	1 cut(s)	1238
Fnu4HI	GCNGC	5 cut(s)	234, 875, 1017, 1566, 1581
FokI	GGATG	4 cut(s)	17, 577, 617, 870
FriOI	GRGCYC	3 cut(s)	144, 606, 1531
Fsp4HI	GCNGC	5 cut(s)	234, 875, 1017, 1566, 1581
GlaI	GCGC	3 cut(s)	590, 753, 1390
GluI	GCNGC	5 cut(s)	234, 875, 1017, 1566, 1581
GsuI	CTGGAG	2 cut(s)	549, 1253
HaeIII	GGCC	5 cut(s)	27, 369, 1030, 1148, 1413
HapII	CCGG	3 cut(s)	332, 779, 816
HgaI	GACGC	2 cut(s)	655, 829
HhaI	GCGC	3 cut(s)	591, 754, 1391
Hin1I	GRCGYC	1 cut(s)	666
Hin6I	GCGC	3 cut(s)	589, 752, 1389
HinP1I	GCGC	3 cut(s)	589, 752, 1389
HindIII	AAGCTT	2 cut(s)	968, 1160
HinfI	GANTC	9 cut(s)	13, 729, 771, 785, 811, 917, 1225, 1762, 1877
HpaII	CCGG	3 cut(s)	332, 779, 816
HphI	GGTGA	8 cut(s)	118, 136, 794, 796, 959, 1093, 1456, 1641
Hpy166II	GTNNAC	5 cut(s)	51, 1143, 1239, 1732, 1808
Hpy188III	TCNNGA	5 cut(s)	549, 1270, 1435, 1450, 1756
Hpy8I	GTNNAC	5 cut(s)	51, 1143, 1239, 1732, 1808
Hpy99I	CGWCG	1 cut(s)	352
HpyCH4III	ACNGT	6 cut(s)	77, 206, 895, 908, 1496, 1707
HpyCH4IV	ACGT	2 cut(s)	191, 1476
HpyF10VI	GCNNNNNNNGC	6 cut(s)	63, 588, 880, 1571, 1580, 1630
HpyF3I	CTNAG	3 cut(s)	378, 1058, 1331
HpySE526I	ACGT	2 cut(s)	191, 1476
Hsp92I	GRCGYC	1 cut(s)	666
HspAI	GCGC	3 cut(s)	589, 752, 1389
KspI	CCGCGG	1 cut(s)	234
Kzo9I	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
LguI	GCTCTTC	4 cut(s)	233, 434, 611, 742
LmnI	GCTCC	1 cut(s)	693
Lsp1109I	GCAGC	3 cut(s)	861, 1003, 1592
LweI	GCATC	5 cut(s)	287, 396, 892, 1033, 1433
MaeII	ACGT	2 cut(s)	191, 1476
MaeIII	GTNAC	7 cut(s)	59, 302, 449, 469, 719, 1171, 1291
MalI	GATC	6 cut(s)	477, 717, 929, 1005, 1487, 1783
MboI	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
MflI	RGATCY	1 cut(s)	1781
MhlI	GDGCHC	6 cut(s)	144, 429, 606, 1494, 1531, 1734
MluCI	AATT	8 cut(s)	29, 174, 266, 444, 910, 1131, 1278, 1506
MlyI	GAGTC	4 cut(s)	780, 820, 926, 1886
MmeI	TCCRAC	3 cut(s)	857, 938, 1668
Mph1103I	ATGCAT	1 cut(s)	1872
MroXI	GAANNNNTTC	1 cut(s)	1695
MseI	TTAA	3 cut(s)	1178, 1536, 1619
MslI	CAYNNNNRTG	3 cut(s)	104, 563, 854
MspA1I	CMGCKG	1 cut(s)	233
MspI	CCGG	3 cut(s)	332, 779, 816
MspR9I	CCNGG	7 cut(s)	693, 710, 742, 780, 816, 817, 964
Mva1269I	GAATGC	1 cut(s)	1187
MvaI	CCWGG	4 cut(s)	693, 710, 742, 964
MvnI	CGCG	3 cut(s)	233, 754, 1125
MwoI	GCNNNNNNNGC	6 cut(s)	63, 588, 880, 1571, 1580, 1630
NciI	CCSGG	3 cut(s)	780, 816, 817
NdeI	CATATG	4 cut(s)	308, 1252, 1288, 1340
NdeII	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
NheI	GCTAGC	1 cut(s)	383
NlaIV	GGNNCC	1 cut(s)	114
NmuCI	GTSAC	4 cut(s)	59, 469, 1171, 1291
NsiI	ATGCAT	1 cut(s)	1872
PaeR7I	CTCGAG	1 cut(s)	1769
PagI	TCATGA	1 cut(s)	1434
PciSI	GCTCTTC	4 cut(s)	233, 434, 611, 742
PcsI	WCGNNNNNNNCGW	1 cut(s)	724
PctI	GAATGC	1 cut(s)	1187
PdmI	GAANNNNTTC	1 cut(s)	1695
PfeI	GAWTC	5 cut(s)	13, 729, 785, 1225, 1762
PfoI	TCCNGGA	1 cut(s)	740
PkrI	GCNGC	5 cut(s)	235, 876, 1018, 1567, 1582
Ple19I	CGATCG	2 cut(s)	718, 1488
PleI	GAGTC	4 cut(s)	779, 819, 925, 1885
PpsI	GAGTC	4 cut(s)	779, 819, 925, 1885
Ppu21I	YACGTR	1 cut(s)	192
PpuMI	RGGWCCY	1 cut(s)	113
PsiI	TTATAA	1 cut(s)	1671
Psp124BI	GAGCTC	2 cut(s)	144, 606
Psp5II	RGGWCCY	1 cut(s)	113
Psp6I	CCWGG	4 cut(s)	691, 708, 740, 962
PspGI	CCWGG	4 cut(s)	691, 708, 740, 962
PspN4I	GGNNCC	1 cut(s)	114
PspPI	GGNCC	5 cut(s)	113, 960, 1028, 1037, 1808
PspPPI	RGGWCCY	1 cut(s)	113
PspXI	VCTCGAGB	1 cut(s)	1769
PstI	CTGCAG	1 cut(s)	1021
PsuI	RGATCY	1 cut(s)	1781
PvuI	CGATCG	2 cut(s)	718, 1488
RsaI	GTAC	3 cut(s)	38, 194, 395
RsaNI	GTAC	3 cut(s)	37, 193, 394
RseI	CAYNNNNRTG	3 cut(s)	104, 563, 854
SacI	GAGCTC	2 cut(s)	144, 606
SacII	CCGCGG	1 cut(s)	234
SapI	GCTCTTC	4 cut(s)	233, 434, 611, 742
SaqAI	TTAA	3 cut(s)	1178, 1536, 1619
SatI	GCNGC	5 cut(s)	234, 875, 1017, 1566, 1581
Sau3AI	GATC	6 cut(s)	475, 715, 927, 1003, 1485, 1781
Sau96I	GGNCC	5 cut(s)	113, 960, 1028, 1037, 1808
SchI	GAGTC	4 cut(s)	780, 820, 926, 1886
ScrFI	CCNGG	7 cut(s)	693, 710, 742, 780, 816, 817, 964
SduI	GDGCHC	6 cut(s)	144, 429, 606, 1494, 1531, 1734
SfaNI	GCATC	5 cut(s)	287, 396, 892, 1033, 1433
SfcI	CTRYAG	1 cut(s)	1017
Sfr274I	CTCGAG	1 cut(s)	1769
Sfr303I	CCGCGG	1 cut(s)	234
SgrBI	CCGCGG	1 cut(s)	234
SinI	GGWCC	4 cut(s)	113, 960, 1037, 1808
SlaI	CTCGAG	1 cut(s)	1769
SmaI	CCCGGG	1 cut(s)	817
SmiMI	CAYNNNNRTG	3 cut(s)	104, 563, 854
SmlI	CTYRAG	2 cut(s)	1754, 1769
SmoI	CTYRAG	2 cut(s)	1754, 1769
Sse9I	AATT	8 cut(s)	29, 174, 266, 444, 910, 1131, 1278, 1506
SsiI	CCGC	4 cut(s)	231, 233, 1123, 1565
SstI	GAGCTC	2 cut(s)	144, 606
StyD4I	CCNGG	7 cut(s)	691, 708, 740, 778, 814, 815, 962
StyI	CCWWGG	1 cut(s)	22
TaaI	ACNGT	6 cut(s)	77, 206, 895, 908, 1496, 1707
TaiI	ACGT	2 cut(s)	194, 1479
TaqI	TCGA	5 cut(s)	11, 350, 714, 1488, 1770
TaqII	GACCGA	1 cut(s)	1825
TasI	AATT	8 cut(s)	29, 174, 266, 444, 910, 1131, 1278, 1506
TauI	GCSGC	2 cut(s)	236, 1568
TfiI	GAWTC	5 cut(s)	13, 729, 785, 1225, 1762
Tru1I	TTAA	3 cut(s)	1178, 1536, 1619
Tru9I	TTAA	3 cut(s)	1178, 1536, 1619
TscAI	CASTG	6 cut(s)	64, 898, 937, 1099, 1403, 1590
TseFI	GTSAC	4 cut(s)	59, 469, 1171, 1291
TseI	GCWGC	3 cut(s)	874, 1016, 1580
Tsp45I	GTSAC	4 cut(s)	59, 469, 1171, 1291
TspMI	CCCGGG	1 cut(s)	815
TspRI	CASTG	6 cut(s)	64, 898, 937, 1099, 1403, 1590
VneI	GTGCAC	1 cut(s)	1730
VpaK11BI	GGWCC	4 cut(s)	113, 960, 1037, 1808
XapI	RAATTY	2 cut(s)	444, 1506
XhoI	CTCGAG	1 cut(s)	1769
XmaI	CCCGGG	1 cut(s)	815
XmiI	GTMKAC	1 cut(s)	1238
XmnI	GAANNNNTTC	1 cut(s)	1695
Zsp2I	ATGCAT	1 cut(s)	1872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.