Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000738

Physical Location & Seq

Genomic Coordinates Reverse (-)

49407248 .. 49412820

Gene Structure 5573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G023550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGTTCGTCTTTTCTTCTCTTTTACGGGTGTACTTCCATGACTATATGGATTCAAATGTGGTGGTCAGAAGCTCATCACCTCCGTCCCATGAAGGAATCAGAAAGGTACGGACAGCGATAAGGCTGTTCTTAGTGTTGGTGGTGTTTGGAGGGTGTGTTTTGCTCTATGTCATGATGCCCACAAACACATATAAGCAGATATGGATGCCTCGAATCCGAGCCAAGGCCAATTCAAGTACCTATTTTGGTTCACAAGGTGCAAATCTTCTGGTATTCACATTGCCCATTATGTTCATTGCTGTGATGGGGTGTGTGTATCTCCATCTGGGAAAGAAGTTGAATGATTATAAAATAGAAAGCAGTGACGGCAAAACTAACCGTTTAGCTGTATGGAAACAGCCCATGCTGGTGAAGGGTCCTCTAGGCATTGTTTCTGGGATAGAGCTCACCTTCTTCATCATGTTTATTGCACTCCTAATTTGGTCTTTCTCCACGTACTTGACCAACGGTTTTGACAAAATCACACCACTATCCGCGGCGAAGAGCCATGAAAAAGTATGGGAAGCTAAATTGGGGAGTGCATCATTGAGGCTAGGGCTTTTGGGTAACATATGCCTTGCACTTCTCTTCTTTCCGGTTGCTCGTGGCTCGTCGATTTTGCCTCTGTTTGGCCTCACCTCTGAGGCTAGCATCAAGTATCATATATGGCTAGGAAATATAGTCATGGTGCTCTTCACAGCTCATGGAATTTGTTACATCATCTATTGGGCTGTCACAGATCAGATGTTTCAGATGATAAAATGGGAGAAAACTGGCATATCAAACATAGCTGGAGAGCTAGCTTTGCTCTCTGGACTTGCCATGTGGATGACTACAATCCCTCGCATTAGGCGCAAAATGTTTGAGCTCTTCTTCTACACACACTACCTTTACATCCTCTTCATGGTCTTCTTCATCTTTCATGTTGGCGTCTCCTATGCTGGCATTATGCTCCCTGGCTTCTTCCTCTTCCTGGTTGATCGTTACCTACGATTCTTGCAATCCAGGAGAAGAGCGCGCTTGGTCTCTGCCCGAGTCTTGCCGGGTGAATCTTTAGAACTCAACTTCACCAAGAGTCCCGGGTTGAAATACAATCCAACAAGCGTCATGTTCATAAATGTGCCTAGTATTTCCAAGCTGCAATGGCATCCTTTCACTGTTACTTCAAACAGTAATTTGGAGCCAGAGAAGATCAGTGTCGTCATCAAAGGTGAAGGAAGTTGGACCAGGAAGCTTTACCAAGTCCTTTCATCGCCTTCTACAAGTGATCGGATTGAGGCTGCAGTTGAAGGGCCTTATGGACCTGATGCAACTCATTTTCTAAGGCATGACAATCTTGTGTTGGTGAGTGGAGGCAGTGGCATTACCCCTTTCATATCCATAATCCGCGAGCTAATTTTTATGTCCACGGCCTTCCAATGCAAGCTTCCGAAAGTGACCTTAATCTGTGCATTCAAACACTCTTCAGACCTCACAATGCTAGACCTGATTCTACCAATGTCTACCACCACACCATATGACATTTCCAATCTCCAGATACAAATTGAGGCATATGTGACTAGAGACACAAAGCCGAAGGATTACTCAATGAACCTCAGAGCCATATGGTTCAAACCCCTTGCAACTGATGAACCCGTTTCAGCTGTTTTGGGCGCAAACCACTGGCTCTGGCTTGGCCTCATCATAGCATCTTCCTTCATGATGTTCCTCATCTTGATTGGTATCATCACCAGATACTACGTTTATCCGATCGAGCACAGTTCCTATAAGATTTTTTCGTTTCCTTTGAGGGCTCTGTTTAATATGTTGGCTATATGTATCTCCATAGCTGCAACAGCTAGTGCAGCAGTGTTGTGGAACAAGAGAAGTAATGCCAAGGAATTAAAGCAGGTTCAGCTCATAGAAGCCTCATCACCAAGGGGTTCAGAGGTTTATGATGCAGAAAGAGAGTTGGAAAGCCTTCCTCAACAGTCTCTTGTCCAAGCAACCAATGTGCACTATGGTCAAAGACCTGACCTCAAGAGGATTCTACTCGAGTTCAAAGGATCAAGTGTTGGGGTTCTTGCTAGTGGACCGAAGAAGATGAGGCATGAGGTTGCAACCATTTGTTCATCTGGTTTGTCAGAAAATATGCATTTTGAGTCCATCAGCTTTAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0015688 GO:0016020 GO:0016491 GO:0016722 GO:0016723 GO:0042592 GO:0043207 GO:0044464 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055114 GO:0065007 GO:0065008 GO:0071944 GO:0098771 GO:1901678

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

733

Amino Acids

82.69

Weight (kDa)

9.51

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	198 - 318	1.2e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	352 - 449	7.8e-24	FAD-binding domain
NAD_binding_6	PF08030	456 - 716	8.9e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01580 AT1G01580 AT1G01590 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020 AT1G23020
fragaria_vesca	FvH4_7g14960 FvH4_7g14960
malus_domestica	MD01G1068100.v1.1 MD01G1068200.v1.1 MD01G1207100.v1.1 MD07G1278000.v1.1
prunus_persica	Prupe.2G174300_v2.0.a1 Prupe.2G174300_v2.0.a1 Prupe.2G299800_v2.0.a1
pyrus_communis	pycom01g09740 pycom01g21770 pycom01g21780
rosa_chinensis	RchiOBHm_Chr1g0356941 RchiOBHm_Chr1g0356951 RchiOBHm_Chr1g0356961 RchiOBHm_Chr1g0378111
rosa_laevigata	RLG00000026471 RLG00000028067 RLG00000028068 RLG00000028070
rosa_multiflora	Rmu_co8127120.1_g000001 Rmu_co8180978.1_g000001 Rmu_co8386121.1_g000001 Rmu_sc0000166.1_g000020 Rmu_sc0000166.1_g000024 Rmu_sc0004595.1_g000001 Rmu_sc0004595.1_g000002 Rmu_sc0004595.1_g000005 Rmu_sc0031595.1_g000001
rosa_roxburghii	Rroxscaffold_156G00440280 Rroxscaffold_4G00280770 Rroxscaffold_4G00299170 Rroxscaffold_4G00299190 Rroxscaffold_4G00299200
rosa_rugosa	Rorug01G0252100 Rorug01G0252200 Rorug01G0252300 Rorug01G0252400 Rorug01G0252500
rosa_samantha	Rh1AG266800 Rh1AG266900 Rh1AG267000 Rh1AG423400 Rh1BG234100 Rh1BG234200 Rh1BG234300 Rh1BG234400 Rh1BG234500 Rh1BG385200 Rh1CG250200 Rh1CG250300 Rh1CG250400 Rh1CG399200 Rh1DG261600 Rh1DG261800 Rh1DG261900 Rh1DG416400
rosa_wichuraiana	Rw1G023550 Rw1G023560 Rw1G023570 Rw1G037380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	348
Acc36I	ACCTGC	1 cut(s)	1918
AccI	GTMKAC	1 cut(s)	1541
AccII	CGCG	3 cut(s)	536, 1057, 1428
AciI	CCGC	3 cut(s)	534, 536, 1426
AclWI	GGATC	1 cut(s)	2092
AcsI	RAATTY	1 cut(s)	747
AcuI	CTGAAG	1 cut(s)	1488
AcyI	GRCGYC	1 cut(s)	969
AdeI	CACNNNGTG	1 cut(s)	257
AfaI	GTAC	4 cut(s)	32, 108, 238, 497
AfiI	CCNNNNNNNGG	4 cut(s)	223, 668, 943, 1012
AgsI	TTSAA	9 cut(s)	54, 234, 340, 1126, 1206, 1328, 1495, 1651, 2080
AjnI	CCWGG	4 cut(s)	994, 1011, 1043, 1265
AjuI	GAANNNNNNNTTGG	2 cut(s)	1449, 1481
Alw21I	GWGCWC	5 cut(s)	447, 732, 909, 1797, 2037
Alw26I	GTCTC	4 cut(s)	976, 1069, 1596, 2016
Alw44I	GTGCAC	1 cut(s)	2033
AlwI	GGATC	1 cut(s)	2092
Ama87I	CYCGRG	3 cut(s)	1071, 1118, 2072
AoxI	GGCC	5 cut(s)	225, 670, 1331, 1449, 1714
ApaLI	GTGCAC	1 cut(s)	2033
ApeKI	GCWGC	4 cut(s)	1177, 1319, 1868, 1883
ApoI	RAATTY	1 cut(s)	747
Asp700I	GAANNNNTTC	1 cut(s)	1998
AspLEI	GCGC	4 cut(s)	894, 1057, 1059, 1694
AspS9I	GGNCC	5 cut(s)	416, 1263, 1331, 1340, 2111
AsuC2I	CCSGG	3 cut(s)	1083, 1119, 1120
AsuNHI	GCTAGC	2 cut(s)	686, 838
AvaI	CYCGRG	3 cut(s)	1071, 1118, 2072
AvaII	GGWCC	4 cut(s)	416, 1263, 1340, 2111
BaeGI	GKGCMC	1 cut(s)	2037
BanII	GRGCYC	3 cut(s)	447, 909, 1834
BauI	CACGAG	1 cut(s)	642
BbsI	GAAGAC	1 cut(s)	940
Bbv12I	GWGCWC	5 cut(s)	447, 732, 909, 1797, 2037
BbvI	GCAGC	4 cut(s)	1164, 1306, 1855, 1895
BccI	CCATC	3 cut(s)	298, 330, 2192
BceAI	ACGGC	2 cut(s)	382, 1464
BciT130I	CCWGG	4 cut(s)	996, 1013, 1045, 1267
BcnI	CCSGG	3 cut(s)	1083, 1119, 1120
BcoDI	GTCTC	4 cut(s)	976, 1069, 1596, 2016
BfmI	CTRYAG	1 cut(s)	1320
BfuAI	ACCTGC	1 cut(s)	1918
BisI	GCNGC	5 cut(s)	537, 1178, 1320, 1869, 1884
BlsI	GCNGC	5 cut(s)	538, 1179, 1321, 1870, 1885
Bme1390I	CCNGG	7 cut(s)	996, 1013, 1045, 1083, 1119, 1120, 1267
Bme18I	GGWCC	4 cut(s)	416, 1263, 1340, 2111
BmeT110I	CYCGRG	3 cut(s)	1071, 1118, 2072
BmgT120I	GGNCC	5 cut(s)	416, 1263, 1331, 1340, 2111
BmiI	GGNNCC	2 cut(s)	417, 1221
BmrFI	CCNGG	7 cut(s)	996, 1013, 1045, 1083, 1119, 1120, 1267
BmsI	GCATC	8 cut(s)	165, 195, 590, 699, 1195, 1336, 1736, 1966
BmtI	GCTAGC	2 cut(s)	690, 842
BpiI	GAAGAC	1 cut(s)	940
BpmI	CTGGAG	2 cut(s)	852, 1556
BpuEI	CTTGAG	1 cut(s)	2042
BpuMI	CCSGG	3 cut(s)	1083, 1119, 1120
BsaAI	YACGTR	1 cut(s)	495
BsaBI	GATNNNNATC	1 cut(s)	1760
BsaHI	GRCGYC	1 cut(s)	969
BsaI	GGTCTC	1 cut(s)	1069
BsaJI	CCNNGG	7 cut(s)	222, 534, 994, 1118, 1446, 1914, 1955
BsaWI	WCCGGW	1 cut(s)	634
BsaXI	ACNNNNNCTCC	2 cut(s)	141, 171
Bsc4I	CCNNNNNNNGG	4 cut(s)	223, 668, 943, 1012
Bse1I	ACTGG	2 cut(s)	817, 1706
Bse3DI	GCAATG	3 cut(s)	278, 294, 1187
Bse8I	GATNNNNATC	1 cut(s)	1760
BseBI	CCWGG	4 cut(s)	996, 1013, 1045, 1267
BseDI	CCNNGG	7 cut(s)	222, 534, 994, 1118, 1446, 1914, 1955
BseGI	GGATG	4 cut(s)	210, 873, 933, 1186
BseJI	GATNNNNATC	1 cut(s)	1760
BseLI	CCNNNNNNNGG	4 cut(s)	223, 668, 943, 1012
BseMI	GCAATG	3 cut(s)	278, 294, 1187
BseMII	CTCAG	2 cut(s)	672, 1648
BseNI	ACTGG	2 cut(s)	817, 1706
BsePI	GCGCGC	1 cut(s)	1055
BseSI	GKGCMC	1 cut(s)	2037
BseXI	GCAGC	4 cut(s)	1164, 1306, 1855, 1895
BsgI	GTGCAG	1 cut(s)	1902
Bsh1236I	CGCG	3 cut(s)	536, 1057, 1428
Bsh1285I	CGRYCG	1 cut(s)	1791
BshFI	GGCC	5 cut(s)	227, 672, 1333, 1451, 1716
BsiEI	CGRYCG	1 cut(s)	1791
BsiHKAI	GWGCWC	5 cut(s)	447, 732, 909, 1797, 2037
BsiHKCI	CYCGRG	3 cut(s)	1071, 1118, 2072
BsiSI	CCGG	3 cut(s)	635, 1082, 1119
BslFI	GGGAC	2 cut(s)	70, 1101
BslI	CCNNNNNNNGG	4 cut(s)	223, 668, 943, 1012
BsmAI	GTCTC	4 cut(s)	976, 1069, 1596, 2016
BsmBI	CGTCTC	1 cut(s)	976
BsmFI	GGGAC	2 cut(s)	70, 1101
BsmI	GAATGC	1 cut(s)	1490
BsnI	GGCC	5 cut(s)	227, 672, 1333, 1451, 1716
Bso31I	GGTCTC	1 cut(s)	1069
BsoBI	CYCGRG	3 cut(s)	1071, 1118, 2072
Bsp1286I	GDGCHC	6 cut(s)	447, 732, 909, 1797, 1834, 2037
Bsp143I	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
BspACI	CCGC	3 cut(s)	534, 536, 1426
BspANI	GGCC	5 cut(s)	227, 672, 1333, 1451, 1716
BspCNI	CTCAG	2 cut(s)	673, 1647
BspFNI	CGCG	3 cut(s)	536, 1057, 1428
BspHI	TCATGA	2 cut(s)	171, 1737
BspLI	GGNNCC	2 cut(s)	417, 1221
BspMAI	CTGCAG	1 cut(s)	1324
BspMI	ACCTGC	1 cut(s)	1918
BspOI	GCTAGC	2 cut(s)	690, 842
BspPI	GGATC	1 cut(s)	2092
BspQI	GCTCTTC	4 cut(s)	536, 737, 914, 1045
BspTNI	GGTCTC	1 cut(s)	1069
BsrDI	GCAATG	3 cut(s)	278, 294, 1187
BsrI	ACTGG	2 cut(s)	817, 1706
BssECI	CCNNGG	7 cut(s)	222, 534, 994, 1118, 1446, 1914, 1955
BssHII	GCGCGC	1 cut(s)	1055
BssMI	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
BssNI	GRCGYC	1 cut(s)	969
BssSI	CACGAG	1 cut(s)	642
BssT1I	CCWWGG	3 cut(s)	222, 1914, 1955
Bst2BI	CACGAG	1 cut(s)	642
Bst2UI	CCWGG	4 cut(s)	996, 1013, 1045, 1267
Bst4CI	ACNGT	6 cut(s)	380, 509, 1198, 1211, 1799, 2010
Bst6I	CTCTTC	8 cut(s)	536, 632, 737, 914, 944, 1013, 1045, 1507
BstACI	GRCGYC	1 cut(s)	969
BstBAI	YACGTR	1 cut(s)	495
BstC8I	GCNNGC	6 cut(s)	688, 840, 982, 1057, 1430, 1463
BstDEI	CTNAG	4 cut(s)	130, 681, 1361, 1634
BstDSI	CCRYGG	2 cut(s)	534, 1446
BstF5I	GGATG	4 cut(s)	210, 873, 933, 1186
BstFNI	CGCG	3 cut(s)	536, 1057, 1428
BstHHI	GCGC	4 cut(s)	894, 1057, 1059, 1694
BstKTI	GATC	6 cut(s)	781, 1021, 1233, 1309, 1791, 2087
BstMAI	GTCTC	4 cut(s)	976, 1069, 1596, 2016
BstMBI	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
BstMCI	CGRYCG	1 cut(s)	1791
BstMWI	GCNNNNNNNGC	7 cut(s)	366, 844, 891, 1183, 1874, 1883, 1933
BstNI	CCWGG	4 cut(s)	996, 1013, 1045, 1267
BstSCI	CCNGG	7 cut(s)	994, 1011, 1043, 1081, 1117, 1118, 1265
BstSFI	CTRYAG	1 cut(s)	1320
BstSLI	GKGCMC	1 cut(s)	2037
BstUI	CGCG	3 cut(s)	536, 1057, 1428
BstV1I	GCAGC	4 cut(s)	1164, 1306, 1855, 1895
BstV2I	GAAGAC	1 cut(s)	940
BsuRI	GGCC	5 cut(s)	227, 672, 1333, 1451, 1716
BtgI	CCRYGG	2 cut(s)	534, 1446
BtgZI	GCGATG	1 cut(s)	1275
BtsCI	GGATG	4 cut(s)	210, 873, 933, 1186
BtsI	GCAGTG	3 cut(s)	367, 1402, 1893
BtsIMutI	CAGTG	6 cut(s)	367, 1194, 1240, 1402, 1699, 1893
BveI	ACCTGC	1 cut(s)	1918
Cac8I	GCNNGC	6 cut(s)	688, 840, 982, 1057, 1430, 1463
CciI	TCATGA	2 cut(s)	171, 1737
CfoI	GCGC	4 cut(s)	894, 1057, 1059, 1694
Cfr13I	GGNCC	5 cut(s)	416, 1263, 1331, 1340, 2111
Cfr42I	CCGCGG	1 cut(s)	537
Cfr9I	CCCGGG	1 cut(s)	1118
CseI	GACGC	2 cut(s)	958, 1132
Csp6I	GTAC	4 cut(s)	31, 107, 237, 496
CspCI	CAANNNNNGTGG	2 cut(s)	42, 77
CviQI	GTAC	4 cut(s)	31, 107, 237, 496
DdeI	CTNAG	4 cut(s)	130, 681, 1361, 1634
DpnI	GATC	6 cut(s)	780, 1020, 1232, 1308, 1790, 2086
DpnII	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
DraIII	CACNNNGTG	1 cut(s)	257
Eam1104I	CTCTTC	8 cut(s)	536, 632, 737, 914, 944, 1013, 1045, 1507
EarI	CTCTTC	8 cut(s)	536, 632, 737, 914, 944, 1013, 1045, 1507
Ecl136II	GAGCTC	2 cut(s)	445, 907
Eco130I	CCWWGG	3 cut(s)	222, 1914, 1955
Eco24I	GRGCYC	3 cut(s)	447, 909, 1834
Eco31I	GGTCTC	1 cut(s)	1069
Eco47I	GGWCC	4 cut(s)	416, 1263, 1340, 2111
Eco53kI	GAGCTC	2 cut(s)	445, 907
Eco57I	CTGAAG	1 cut(s)	1488
Eco88I	CYCGRG	3 cut(s)	1071, 1118, 2072
EcoICRI	GAGCTC	2 cut(s)	445, 907
EcoO109I	RGGNCCY	2 cut(s)	416, 1331
EcoRII	CCWGG	4 cut(s)	994, 1011, 1043, 1265
EcoT14I	CCWWGG	3 cut(s)	222, 1914, 1955
EcoT22I	ATGCAT	1 cut(s)	2175
EcoT38I	GRGCYC	3 cut(s)	447, 909, 1834
ErhI	CCWWGG	3 cut(s)	222, 1914, 1955
Esp3I	CGTCTC	1 cut(s)	976
FaqI	GGGAC	2 cut(s)	70, 1101
FauNDI	CATATG	4 cut(s)	611, 1555, 1591, 1643
FblI	GTMKAC	1 cut(s)	1541
Fnu4HI	GCNGC	5 cut(s)	537, 1178, 1320, 1869, 1884
FokI	GGATG	4 cut(s)	217, 880, 920, 1173
FriOI	GRGCYC	3 cut(s)	447, 909, 1834
Fsp4HI	GCNGC	5 cut(s)	537, 1178, 1320, 1869, 1884
GlaI	GCGC	4 cut(s)	893, 1056, 1058, 1693
GluI	GCNGC	5 cut(s)	537, 1178, 1320, 1869, 1884
GsuI	CTGGAG	2 cut(s)	852, 1556
HaeIII	GGCC	5 cut(s)	227, 672, 1333, 1451, 1716
HapII	CCGG	3 cut(s)	635, 1082, 1119
HgaI	GACGC	2 cut(s)	958, 1132
HhaI	GCGC	4 cut(s)	894, 1057, 1059, 1694
Hin1I	GRCGYC	1 cut(s)	969
Hin6I	GCGC	4 cut(s)	892, 1055, 1057, 1692
HinP1I	GCGC	4 cut(s)	892, 1055, 1057, 1692
HindIII	AAGCTT	2 cut(s)	1271, 1463
HpaII	CCGG	3 cut(s)	635, 1082, 1119
Hpy166II	GTNNAC	6 cut(s)	31, 251, 1446, 1542, 2035, 2111
Hpy188III	TCNNGA	6 cut(s)	172, 852, 1573, 1738, 1753, 2059
Hpy8I	GTNNAC	6 cut(s)	31, 251, 1446, 1542, 2035, 2111
Hpy99I	CGWCG	1 cut(s)	655
HpyCH4III	ACNGT	6 cut(s)	380, 509, 1198, 1211, 1799, 2010
HpyCH4IV	ACGT	2 cut(s)	494, 1779
HpyF10VI	GCNNNNNNNGC	7 cut(s)	366, 844, 891, 1183, 1874, 1883, 1933
HpyF3I	CTNAG	4 cut(s)	130, 681, 1361, 1634
HpySE526I	ACGT	2 cut(s)	494, 1779
Hsp92I	GRCGYC	1 cut(s)	969
HspAI	GCGC	4 cut(s)	892, 1055, 1057, 1692
KspI	CCGCGG	1 cut(s)	537
Kzo9I	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
LguI	GCTCTTC	4 cut(s)	536, 737, 914, 1045
LmnI	GCTCC	2 cut(s)	996, 1219
Lsp1109I	GCAGC	4 cut(s)	1164, 1306, 1855, 1895
LweI	GCATC	8 cut(s)	165, 195, 590, 699, 1195, 1336, 1736, 1966
MaeII	ACGT	2 cut(s)	494, 1779
MaeIII	GTNAC	8 cut(s)	362, 605, 752, 772, 1022, 1198, 1474, 1594
MalI	GATC	6 cut(s)	780, 1020, 1232, 1308, 1790, 2086
MboI	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
MhlI	GDGCHC	6 cut(s)	447, 732, 909, 1797, 1834, 2037
MluCI	AATT	8 cut(s)	229, 477, 569, 747, 1213, 1434, 1581, 1919
MlyI	GAGTC	3 cut(s)	1083, 1123, 2189
MmeI	TCCRAC	3 cut(s)	1160, 1241, 1971
Mph1103I	ATGCAT	1 cut(s)	2175
MroXI	GAANNNNTTC	1 cut(s)	1998
MseI	TTAA	3 cut(s)	1481, 1839, 1922
MslI	CAYNNNNRTG	4 cut(s)	299, 407, 866, 1157
MspA1I	CMGCKG	2 cut(s)	536, 1682
MspI	CCGG	3 cut(s)	635, 1082, 1119
MspR9I	CCNGG	7 cut(s)	996, 1013, 1045, 1083, 1119, 1120, 1267
Mva1269I	GAATGC	1 cut(s)	1490
MvaI	CCWGG	4 cut(s)	996, 1013, 1045, 1267
MvnI	CGCG	3 cut(s)	536, 1057, 1428
MwoI	GCNNNNNNNGC	7 cut(s)	366, 844, 891, 1183, 1874, 1883, 1933
NciI	CCSGG	3 cut(s)	1083, 1119, 1120
NdeI	CATATG	4 cut(s)	611, 1555, 1591, 1643
NdeII	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
NheI	GCTAGC	2 cut(s)	686, 838
NlaIV	GGNNCC	2 cut(s)	417, 1221
NmuCI	GTSAC	4 cut(s)	362, 772, 1474, 1594
NsiI	ATGCAT	1 cut(s)	2175
PaeR7I	CTCGAG	1 cut(s)	2072
PagI	TCATGA	2 cut(s)	171, 1737
PauI	GCGCGC	1 cut(s)	1055
PciSI	GCTCTTC	4 cut(s)	536, 737, 914, 1045
PcsI	WCGNNNNNNNCGW	1 cut(s)	1027
PctI	GAATGC	1 cut(s)	1490
PdmI	GAANNNNTTC	1 cut(s)	1998
PfeI	GAWTC	7 cut(s)	50, 96, 213, 1032, 1088, 1528, 2065
PfoI	TCCNGGA	1 cut(s)	1043
PkrI	GCNGC	5 cut(s)	538, 1179, 1321, 1870, 1885
Ple19I	CGATCG	1 cut(s)	1791
PleI	GAGTC	3 cut(s)	1082, 1122, 2188
PpsI	GAGTC	3 cut(s)	1082, 1122, 2188
Ppu21I	YACGTR	1 cut(s)	495
PpuMI	RGGWCCY	1 cut(s)	416
PsiI	TTATAA	1 cut(s)	348
Psp124BI	GAGCTC	2 cut(s)	447, 909
Psp5II	RGGWCCY	1 cut(s)	416
Psp6I	CCWGG	4 cut(s)	994, 1011, 1043, 1265
PspGI	CCWGG	4 cut(s)	994, 1011, 1043, 1265
PspN4I	GGNNCC	2 cut(s)	417, 1221
PspPI	GGNCC	5 cut(s)	416, 1263, 1331, 1340, 2111
PspPPI	RGGWCCY	1 cut(s)	416
PspXI	VCTCGAGB	1 cut(s)	2072
PstI	CTGCAG	1 cut(s)	1324
PteI	GCGCGC	1 cut(s)	1055
PvuI	CGATCG	1 cut(s)	1791
PvuII	CAGCTG	1 cut(s)	1682
RsaI	GTAC	4 cut(s)	32, 108, 238, 497
RsaNI	GTAC	4 cut(s)	31, 107, 237, 496
RseI	CAYNNNNRTG	4 cut(s)	299, 407, 866, 1157
SacI	GAGCTC	2 cut(s)	447, 909
SacII	CCGCGG	1 cut(s)	537
SapI	GCTCTTC	4 cut(s)	536, 737, 914, 1045
SaqAI	TTAA	3 cut(s)	1481, 1839, 1922
SatI	GCNGC	5 cut(s)	537, 1178, 1320, 1869, 1884
Sau3AI	GATC	6 cut(s)	778, 1018, 1230, 1306, 1788, 2084
Sau96I	GGNCC	5 cut(s)	416, 1263, 1331, 1340, 2111
SchI	GAGTC	3 cut(s)	1083, 1123, 2189
ScrFI	CCNGG	7 cut(s)	996, 1013, 1045, 1083, 1119, 1120, 1267
SduI	GDGCHC	6 cut(s)	447, 732, 909, 1797, 1834, 2037
SfaNI	GCATC	8 cut(s)	165, 195, 590, 699, 1195, 1336, 1736, 1966
SfcI	CTRYAG	1 cut(s)	1320
Sfr274I	CTCGAG	1 cut(s)	2072
Sfr303I	CCGCGG	1 cut(s)	537
SgrBI	CCGCGG	1 cut(s)	537
SinI	GGWCC	4 cut(s)	416, 1263, 1340, 2111
SlaI	CTCGAG	1 cut(s)	2072
SmaI	CCCGGG	1 cut(s)	1120
SmiMI	CAYNNNNRTG	4 cut(s)	299, 407, 866, 1157
SmlI	CTYRAG	2 cut(s)	2057, 2072
SmoI	CTYRAG	2 cut(s)	2057, 2072
Sse9I	AATT	8 cut(s)	229, 477, 569, 747, 1213, 1434, 1581, 1919
SsiI	CCGC	3 cut(s)	534, 536, 1426
SstI	GAGCTC	2 cut(s)	447, 909
StyD4I	CCNGG	7 cut(s)	994, 1011, 1043, 1081, 1117, 1118, 1265
StyI	CCWWGG	3 cut(s)	222, 1914, 1955
TaaI	ACNGT	6 cut(s)	380, 509, 1198, 1211, 1799, 2010
TaiI	ACGT	2 cut(s)	497, 1782
TaqI	TCGA	4 cut(s)	211, 653, 1791, 2073
TaqII	GACCGA	1 cut(s)	2128
TasI	AATT	8 cut(s)	229, 477, 569, 747, 1213, 1434, 1581, 1919
TatI	WGTACW	1 cut(s)	30
TauI	GCSGC	1 cut(s)	539
TfiI	GAWTC	7 cut(s)	50, 96, 213, 1032, 1088, 1528, 2065
Tru1I	TTAA	3 cut(s)	1481, 1839, 1922
Tru9I	TTAA	3 cut(s)	1481, 1839, 1922
TscAI	CASTG	6 cut(s)	367, 1201, 1240, 1402, 1706, 1893
TseFI	GTSAC	4 cut(s)	362, 772, 1474, 1594
TseI	GCWGC	4 cut(s)	1177, 1319, 1868, 1883
Tsp45I	GTSAC	4 cut(s)	362, 772, 1474, 1594
TspGWI	ACGGA	2 cut(s)	72, 124
TspMI	CCCGGG	1 cut(s)	1118
TspRI	CASTG	6 cut(s)	367, 1201, 1240, 1402, 1706, 1893
VneI	GTGCAC	1 cut(s)	2033
VpaK11BI	GGWCC	4 cut(s)	416, 1263, 1340, 2111
XapI	RAATTY	1 cut(s)	747
XhoI	CTCGAG	1 cut(s)	2072
XmaI	CCCGGG	1 cut(s)	1118
XmiI	GTMKAC	1 cut(s)	1541
XmnI	GAANNNNTTC	1 cut(s)	1998
Zsp2I	ATGCAT	1 cut(s)	2175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.