Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0001131

Physical Location & Seq

Genomic Coordinates Reverse (-)

8127882 .. 8131239

Gene Structure 3358 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1096100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGGGTCAGGGGTTGAGTTGCAGAGAGAGTGACGAACATGGGCTGTTCCGAGCCGTACAATTTGGGGAGCTGGACACCGTGGAAGCTGTGTTACAGAGAGACCCAACTCTCCTCCGCCACTCCACCGTCTACGACCGCCACTCTGCTCTTCATATCGCCGCCGCTAACGGCCAGATCGAGATTCTTTCTATGCTGTTAGAACGATCTGTGAATCCAGATGCGTTAAATCGTCACAAGCTGACTCCATTGATGTTGGCTGCAATGCATGGCAAGATCTCCTGCGTGCAAAAGCTTCTTGACGCAGGAGCAAACGTATTGATGTTTGATTCCCTTAACGGAAGAACCTGCTTGCATTACGCCGCTTACTATGGCCATTCTGATTGCCTTCAAGCTATTGTTTCTGCTGCTCATTCGAGTCCTGTTTCTGTTTCCTGGGGATTTGCACGATTTATAAATATTAGGGATGGTAGAGGAGCAACACCGTTGCATTTGGCAGCACGTCGAAGTAGGCCTGAATGTGTACGTATTCTGTTAGACAACGGGGCTCTTGTTTCTGCTTCAACGGGTGGTTATGGCTGTCCTGGGAGCACTCCGCTTCATTTGGCGGCTAGAGGGGGATCTCTGGATTGCATACGTGGATTGTTGGCGTGGGGTGCAGATCGTGTTCAAAGAGATTCATCCGGGAGAATACCATACGTAGTTGCTTTGAAACACAAACACGGAGCTTGTGCGGCCATGCTAAATCCTTCGTCAGCTGAGCCTCTTGTGTGGCCAGCACCTTTAAAGTGTATTAGTGAGCTTAATCATGAAACAAAAGCTCTGCTAGAACAGGCCTTAATGGAGGCAAACAGGGAGAGGGAGAAGAACATCTTGAAAGGAACCGTTTACTCACTTCCATCTCCGTCACATTCTGATGCAGGCATGGATGACAATATATCTGTGGAAAGTGATTTAGATCTATGCTGCATATGCTTTGAGCAGGTGTGTACAATTGAAGTCCAGAACTGCGGTCACCAAATGTGTGCACAATGCACTCTAGCCCTCTGCTGCTACAACAAGCCTAACCCAACTACATTATGCCTAATGCCACCGGTTTGCCCATTCTGCCGAAGCCCCATTGCCCATCTGCTAGTTGCAAAGATCAAAAGTTGCGATGATGGTGACCATGACACCGCAGATAACAATTCCTCCAAGCTAAGAAAGGCAAGGAGGTCCCGAAACTTCAGTGAGGGCAGCAGCAGCTTCAAGGGCGTATCGGCACTTGGTTCTTTCGGGAAGATGGGCGGCCGTGGCTCAGGCATTATTGCTGAAAATGAATGGGTTGACAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051704 GO:0051707 GO:0051865 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 Ank_5

Protein Analysis

445

Amino Acids

47.94

Weight (kDa)

7.51

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	15 - 106	1.7e-14	Ankyrin repeats (3 copies)
Ank_4	PF13637	50 - 99	1.9e-08	Ankyrin repeats (many copies)
Ank_4	PF13637	85 - 130	1.1e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	112 - 184	1.8e-11	Ankyrin repeats (3 copies)
Ank_5	PF13857	151 - 188	3.5e-06	Ankyrin repeats (many copies)
Ank	PF00023	158 - 186	1.5e-06	Ankyrin repeat
Ank_4	PF13637	162 - 212	9.4e-07	Ankyrin repeats (many copies)
RING_XB3-XBAT31	PF24921	320 - 374	1.1e-20	E3 ubiquitin-protein ligase XB3/XBAT31 RING finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001131)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28840 AT2G28840
fragaria_vesca	FvH4_3g35930 FvH4_6g13990 FvH4_6g13990 FvH4_6g13990
malus_domestica	MD03G1096100.v1.1 MD04G1126800.v1.1 MD11G1110600.v1.1 MD12G1078200.v1.1
prunus_persica	Prupe.6G079100_v2.0.a1 Prupe.6G253500_v2.0.a1 Prupe.6G253500_v2.0.a1
pyrus_communis	pycom03g07860 pycom04g11370 pycom11g09140 pycom12g13520
rosa_chinensis	RchiOBHm_Chr1g0314361 RchiOBHm_Chr1g0357421 RchiOBHm_Chr2g0133681 RchiOBHm_Chr3g0466811 RchiOBHm_Chr3g0487431 RchiOBHm_Chr5g0038661 RchiOBHm_Chr5g0051561 RchiOBHm_Chr5g0064211
rosa_laevigata	RLG00000024550 RLG00000035712
rosa_multiflora	Rmu_sc0000147.1_g000071 Rmu_sc0000259.1_g000037 Rmu_sc0000259.1_g000038 Rmu_sc0000924.1_g000027 Rmu_sc0008017.1_g000003 Rmu_sc0011921.1_g000015 Rmu_ssc0000170.1_g000007
rosa_roxburghii	Rroxscaffold_1G00016740 Rroxscaffold_1G00038780 Rroxscaffold_4G00300840 Rroxscaffold_6G00414120
rosa_rugosa	Rorug03G0083800 Rorug05G0363400
rosa_samantha	Rh2AG384600 Rh2BG197500 Rh2BG371900 Rh2BG492700 Rh2DG501500 Rh3AG131400 Rh3BG152500 Rh3DG153600 Rh5AG421300 Rh5BG362000 Rh5BG436900 Rh5CG459600 Rh5DG450300 Rh6DG133300 Rh7AG222900
rosa_wichuraiana	Rw2G039230 Rw3G012420 Rw5G039670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	452
AarI	CACCTGC	1 cut(s)	970
Acc36I	ACCTGC	2 cut(s)	353, 970
AccI	GTMKAC	1 cut(s)	129
AclWI	GGATC	1 cut(s)	625
AcoI	YGGCCR	5 cut(s)	169, 370, 732, 770, 1285
AcuI	CTGAAG	1 cut(s)	1207
AfaI	GTAC	3 cut(s)	57, 522, 988
AgeI	ACCGGT	1 cut(s)	1090
AgsI	TTSAA	7 cut(s)	389, 561, 668, 709, 874, 995, 1246
AjiI	CACGTC	1 cut(s)	500
AjnI	CCWGG	2 cut(s)	431, 580
Alw21I	GWGCWC	2 cut(s)	590, 1027
Alw26I	GTCTC	1 cut(s)	93
Alw44I	GTGCAC	1 cut(s)	1023
AlwI	GGATC	1 cut(s)	625
AoxI	GGCC	7 cut(s)	169, 370, 509, 732, 770, 831, 1285
ApaLI	GTGCAC	1 cut(s)	1023
ApeKI	GCWGC	8 cut(s)	257, 404, 494, 963, 1047, 1233, 1236, 1239
AsiGI	ACCGGT	1 cut(s)	1090
AspS9I	GGNCC	1 cut(s)	1212
AsuC2I	CCSGG	1 cut(s)	682
AsuHPI	GGTGA	2 cut(s)	1004, 1172
AvaII	GGWCC	1 cut(s)	1212
BaeGI	GKGCMC	1 cut(s)	1027
BalI	TGGCCA	2 cut(s)	372, 772
BanII	GRGCYC	1 cut(s)	547
BarI	GAAGNNNNNNTAC	2 cut(s)	75, 107
Bbv12I	GWGCWC	2 cut(s)	590, 1027
BbvI	GCAGC	8 cut(s)	244, 391, 506, 950, 1034, 1245, 1248, 1251
BccI	CCATC	5 cut(s)	458, 904, 1131, 1151, 1273
BceAI	ACGGC	3 cut(s)	38, 184, 1272
BciT130I	CCWGG	2 cut(s)	433, 582
BcnI	CCSGG	1 cut(s)	682
BcoDI	GTCTC	1 cut(s)	93
BfaI	CTAG	4 cut(s)	609, 824, 1037, 1130
BfuAI	ACCTGC	2 cut(s)	353, 970
BglII	AGATCT	2 cut(s)	273, 955
BlpI	GCTNAGC	1 cut(s)	756
Bme1390I	CCNGG	3 cut(s)	433, 582, 682
Bme18I	GGWCC	1 cut(s)	1212
BmgBI	CACGTC	1 cut(s)	500
BmgT120I	GGNCC	1 cut(s)	1212
BmiI	GGNNCC	2 cut(s)	880, 1214
BmrFI	CCNGG	3 cut(s)	433, 582, 682
BmsI	GCATC	2 cut(s)	208, 904
Bpu10I	CCTNAGC	1 cut(s)	1294
Bpu1102I	GCTNAGC	1 cut(s)	756
BpuMI	CCSGG	1 cut(s)	682
BsaAI	YACGTR	3 cut(s)	524, 635, 697
BsaBI	GATNNNNATC	1 cut(s)	954
BsaI	GGTCTC	1 cut(s)	93
BsaJI	CCNNGG	4 cut(s)	78, 432, 581, 1288
BsaWI	WCCGGW	1 cut(s)	1090
BsaXI	ACNNNNNCTCC	4 cut(s)	297, 327, 1172, 1202
Bse118I	RCCGGY	1 cut(s)	1090
Bse3DI	GCAATG	2 cut(s)	267, 1116
Bse8I	GATNNNNATC	1 cut(s)	954
BseBI	CCWGG	2 cut(s)	433, 582
BseDI	CCNNGG	4 cut(s)	78, 432, 581, 1288
BseGI	GGATG	3 cut(s)	469, 677, 931
BseJI	GATNNNNATC	1 cut(s)	954
BseMI	GCAATG	2 cut(s)	267, 1116
BseMII	CTCAG	2 cut(s)	747, 1308
BseRI	GAGGAG	2 cut(s)	101, 486
BseSI	GKGCMC	1 cut(s)	1027
BseX3I	CGGCCG	1 cut(s)	1285
BseXI	GCAGC	8 cut(s)	244, 391, 506, 950, 1034, 1245, 1248, 1251
BsgI	GTGCAG	1 cut(s)	675
Bsh1285I	CGRYCG	2 cut(s)	136, 1288
BshFI	GGCC	7 cut(s)	171, 372, 511, 734, 772, 833, 1287
BshTI	ACCGGT	1 cut(s)	1090
BsiEI	CGRYCG	2 cut(s)	136, 1288
BsiHKAI	GWGCWC	2 cut(s)	590, 1027
BsiSI	CCGG	2 cut(s)	681, 1091
BslFI	GGGAC	1 cut(s)	1198
BsmAI	GTCTC	1 cut(s)	93
BsmFI	GGGAC	1 cut(s)	1198
BsnI	GGCC	7 cut(s)	171, 372, 511, 734, 772, 833, 1287
Bso31I	GGTCTC	1 cut(s)	93
Bsp1286I	GDGCHC	3 cut(s)	547, 590, 1027
Bsp1407I	TGTACA	1 cut(s)	986
Bsp143I	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
Bsp1720I	GCTNAGC	1 cut(s)	756
BspANI	GGCC	7 cut(s)	171, 372, 511, 734, 772, 833, 1287
BspCNI	CTCAG	2 cut(s)	748, 1307
BspHI	TCATGA	1 cut(s)	805
BspLI	GGNNCC	2 cut(s)	880, 1214
BspMI	ACCTGC	2 cut(s)	353, 970
BspPI	GGATC	1 cut(s)	625
BspQI	GCTCTTC	1 cut(s)	153
BspTNI	GGTCTC	1 cut(s)	93
BsrDI	GCAATG	2 cut(s)	267, 1116
BsrFI	RCCGGY	1 cut(s)	1090
BsrGI	TGTACA	1 cut(s)	986
BssAI	RCCGGY	1 cut(s)	1090
BssECI	CCNNGG	4 cut(s)	78, 432, 581, 1288
BssMI	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
Bst2UI	CCWGG	2 cut(s)	433, 582
Bst4CI	ACNGT	4 cut(s)	79, 127, 483, 883
Bst6I	CTCTTC	1 cut(s)	153
BstAUI	TGTACA	1 cut(s)	986
BstBAI	YACGTR	3 cut(s)	524, 635, 697
BstC8I	GCNNGC	4 cut(s)	284, 350, 774, 919
BstDEI	CTNAG	3 cut(s)	756, 1196, 1294
BstDSI	CCRYGG	2 cut(s)	78, 1288
BstEII	GGTNACC	2 cut(s)	1010, 1160
BstF5I	GGATG	3 cut(s)	469, 677, 931
BstKTI	GATC	7 cut(s)	177, 206, 276, 620, 661, 958, 1143
BstMAI	GTCTC	1 cut(s)	93
BstMBI	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
BstMCI	CGRYCG	2 cut(s)	136, 1288
BstMWI	GCNNNNNNNGC	7 cut(s)	653, 731, 969, 1104, 1239, 1248, 1290
BstNI	CCWGG	2 cut(s)	433, 582
BstPI	GGTNACC	2 cut(s)	1010, 1160
BstSCI	CCNGG	3 cut(s)	431, 580, 680
BstSLI	GKGCMC	1 cut(s)	1027
BstSNI	TACGTA	2 cut(s)	524, 697
BstV1I	GCAGC	8 cut(s)	244, 391, 506, 950, 1034, 1245, 1248, 1251
BstX2I	RGATCY	3 cut(s)	273, 617, 955
BstYI	RGATCY	3 cut(s)	273, 617, 955
BstZI	CGGCCG	1 cut(s)	1285
BsuRI	GGCC	7 cut(s)	171, 372, 511, 734, 772, 833, 1287
BtgI	CCRYGG	2 cut(s)	78, 1288
BtgZI	GCGATG	1 cut(s)	1167
BtrI	CACGTC	1 cut(s)	500
BtsCI	GGATG	3 cut(s)	469, 677, 931
BtsIMutI	CAGTG	1 cut(s)	1231
BveI	ACCTGC	2 cut(s)	353, 970
Cac8I	GCNNGC	4 cut(s)	284, 350, 774, 919
CciI	TCATGA	1 cut(s)	805
Cfr10I	RCCGGY	1 cut(s)	1090
Cfr13I	GGNCC	1 cut(s)	1212
CseI	GACGC	1 cut(s)	308
Csp6I	GTAC	3 cut(s)	56, 521, 987
CspAI	ACCGGT	1 cut(s)	1090
CviAII	CATG	6 cut(s)	38, 266, 736, 806, 922, 1166
CviQI	GTAC	3 cut(s)	56, 521, 987
DdeI	CTNAG	3 cut(s)	756, 1196, 1294
DpnI	GATC	7 cut(s)	176, 205, 275, 619, 660, 957, 1142
DpnII	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
DraI	TTTAAA	1 cut(s)	783
EaeI	YGGCCR	5 cut(s)	169, 370, 732, 770, 1285
EagI	CGGCCG	1 cut(s)	1285
Eam1104I	CTCTTC	1 cut(s)	153
EarI	CTCTTC	1 cut(s)	153
EciI	GGCGGA	1 cut(s)	104
EclXI	CGGCCG	1 cut(s)	1285
Eco105I	TACGTA	2 cut(s)	524, 697
Eco147I	AGGCCT	2 cut(s)	511, 833
Eco24I	GRGCYC	1 cut(s)	547
Eco31I	GGTCTC	1 cut(s)	93
Eco47I	GGWCC	1 cut(s)	1212
Eco52I	CGGCCG	1 cut(s)	1285
Eco57I	CTGAAG	1 cut(s)	1207
Eco91I	GGTNACC	2 cut(s)	1010, 1160
EcoO109I	RGGNCCY	1 cut(s)	1212
EcoO65I	GGTNACC	2 cut(s)	1010, 1160
EcoRII	CCWGG	2 cut(s)	431, 580
EcoT22I	ATGCAT	1 cut(s)	267
EcoT38I	GRGCYC	1 cut(s)	547
FaeI	CATG	6 cut(s)	41, 269, 739, 809, 925, 1169
FalI	AAGNNNNNCTT	2 cut(s)	854, 886
FaqI	GGGAC	1 cut(s)	1198
FatI	CATG	6 cut(s)	37, 265, 735, 805, 921, 1165
FauNDI	CATATG	1 cut(s)	968
FblI	GTMKAC	1 cut(s)	129
FokI	GGATG	3 cut(s)	476, 664, 938
FriOI	GRGCYC	1 cut(s)	547
FspBI	CTAG	4 cut(s)	609, 824, 1037, 1130
HaeIII	GGCC	7 cut(s)	171, 372, 511, 734, 772, 833, 1287
HapII	CCGG	2 cut(s)	681, 1091
HgaI	GACGC	1 cut(s)	308
Hin1II	CATG	6 cut(s)	41, 269, 739, 809, 925, 1169
HincII	GTYRAC	1 cut(s)	1324
HindII	GTYRAC	1 cut(s)	1324
HindIII	AAGCTT	1 cut(s)	290
HinfI	GANTC	6 cut(s)	181, 211, 241, 326, 415, 674
HpaII	CCGG	2 cut(s)	681, 1091
HphI	GGTGA	2 cut(s)	1004, 1172
Hpy166II	GTNNAC	6 cut(s)	130, 521, 886, 987, 1025, 1324
Hpy188I	TCNGA	3 cut(s)	50, 379, 913
Hpy188III	TCNNGA	9 cut(s)	178, 215, 296, 623, 806, 871, 1000, 1215, 1273
Hpy8I	GTNNAC	6 cut(s)	130, 521, 886, 987, 1025, 1324
Hpy99I	CGWCG	1 cut(s)	504
HpyAV	CCTTC	2 cut(s)	395, 756
HpyCH4III	ACNGT	4 cut(s)	79, 127, 483, 883
HpyCH4IV	ACGT	5 cut(s)	312, 499, 523, 634, 696
HpyF10VI	GCNNNNNNNGC	7 cut(s)	653, 731, 969, 1104, 1239, 1248, 1290
HpyF3I	CTNAG	3 cut(s)	756, 1196, 1294
HpySE526I	ACGT	5 cut(s)	312, 499, 523, 634, 696
Hsp92II	CATG	6 cut(s)	41, 269, 739, 809, 925, 1169
Kzo9I	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
LguI	GCTCTTC	1 cut(s)	153
LmnI	GCTCC	5 cut(s)	67, 305, 473, 585, 722
Lsp1109I	GCAGC	8 cut(s)	244, 391, 506, 950, 1034, 1245, 1248, 1251
LweI	GCATC	2 cut(s)	208, 904
MaeI	CTAG	4 cut(s)	609, 824, 1037, 1130
MaeII	ACGT	5 cut(s)	312, 499, 523, 634, 696
MaeIII	GTNAC	6 cut(s)	29, 90, 230, 903, 1010, 1160
MalI	GATC	7 cut(s)	176, 205, 275, 619, 660, 957, 1142
MboI	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
MboII	GAAGA	4 cut(s)	140, 351, 874, 1288
MfeI	CAATTG	1 cut(s)	990
MflI	RGATCY	3 cut(s)	273, 617, 955
MhlI	GDGCHC	3 cut(s)	547, 590, 1027
MlsI	TGGCCA	2 cut(s)	372, 772
MluCI	AATT	3 cut(s)	59, 990, 1183
MluNI	TGGCCA	2 cut(s)	372, 772
MlyI	GAGTC	2 cut(s)	235, 424
Mox20I	TGGCCA	2 cut(s)	372, 772
Mph1103I	ATGCAT	1 cut(s)	267
MscI	TGGCCA	2 cut(s)	372, 772
MseI	TTAA	5 cut(s)	224, 333, 782, 801, 836
MslI	CAYNNNNRTG	1 cut(s)	912
Msp20I	TGGCCA	2 cut(s)	372, 772
MspA1I	CMGCKG	1 cut(s)	755
MspI	CCGG	2 cut(s)	681, 1091
MspR9I	CCNGG	3 cut(s)	433, 582, 682
MunI	CAATTG	1 cut(s)	990
MvaI	CCWGG	2 cut(s)	433, 582
MwoI	GCNNNNNNNGC	7 cut(s)	653, 731, 969, 1104, 1239, 1248, 1290
NciI	CCSGG	1 cut(s)	682
NdeI	CATATG	1 cut(s)	968
NdeII	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
NlaIII	CATG	6 cut(s)	41, 269, 739, 809, 925, 1169
NlaIV	GGNNCC	2 cut(s)	880, 1214
NmuCI	GTSAC	5 cut(s)	29, 230, 903, 1010, 1160
NsiI	ATGCAT	1 cut(s)	267
PagI	TCATGA	1 cut(s)	805
PaqCI	CACCTGC	1 cut(s)	970
PceI	AGGCCT	2 cut(s)	511, 833
PciSI	GCTCTTC	1 cut(s)	153
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PfeI	GAWTC	4 cut(s)	181, 211, 326, 674
PfoI	TCCNGGA	1 cut(s)	680
PinAI	ACCGGT	1 cut(s)	1090
PleI	GAGTC	2 cut(s)	235, 423
PpsI	GAGTC	2 cut(s)	235, 423
Ppu21I	YACGTR	3 cut(s)	524, 635, 697
PpuMI	RGGWCCY	1 cut(s)	1212
PsiI	TTATAA	1 cut(s)	452
Psp5II	RGGWCCY	1 cut(s)	1212
Psp6I	CCWGG	2 cut(s)	431, 580
PspEI	GGTNACC	2 cut(s)	1010, 1160
PspGI	CCWGG	2 cut(s)	431, 580
PspN4I	GGNNCC	2 cut(s)	880, 1214
PspPI	GGNCC	1 cut(s)	1212
PspPPI	RGGWCCY	1 cut(s)	1212
PsuI	RGATCY	3 cut(s)	273, 617, 955
PvuII	CAGCTG	1 cut(s)	755
RsaI	GTAC	3 cut(s)	57, 522, 988
RsaNI	GTAC	3 cut(s)	56, 521, 987
RseI	CAYNNNNRTG	1 cut(s)	912
SapI	GCTCTTC	1 cut(s)	153
SaqAI	TTAA	5 cut(s)	224, 333, 782, 801, 836
Sau3AI	GATC	7 cut(s)	174, 203, 273, 617, 658, 955, 1140
Sau96I	GGNCC	1 cut(s)	1212
SchI	GAGTC	2 cut(s)	235, 424
ScrFI	CCNGG	3 cut(s)	433, 582, 682
SduI	GDGCHC	3 cut(s)	547, 590, 1027
SfaNI	GCATC	2 cut(s)	208, 904
SinI	GGWCC	1 cut(s)	1212
SmiMI	CAYNNNNRTG	1 cut(s)	912
SnaBI	TACGTA	2 cut(s)	524, 697
Sse9I	AATT	3 cut(s)	59, 990, 1183
SseBI	AGGCCT	2 cut(s)	511, 833
SspI	AATATT	1 cut(s)	457
SspMI	CTAG	4 cut(s)	609, 824, 1037, 1130
StuI	AGGCCT	2 cut(s)	511, 833
StyD4I	CCNGG	3 cut(s)	431, 580, 680
TaaI	ACNGT	4 cut(s)	79, 127, 483, 883
TaiI	ACGT	5 cut(s)	315, 502, 526, 637, 699
TaqI	TCGA	3 cut(s)	177, 413, 502
TasI	AATT	3 cut(s)	59, 990, 1183
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	6 cut(s)	161, 164, 362, 608, 734, 1287
TfiI	GAWTC	4 cut(s)	181, 211, 326, 674
Tru1I	TTAA	5 cut(s)	224, 333, 782, 801, 836
Tru9I	TTAA	5 cut(s)	224, 333, 782, 801, 836
TscAI	CASTG	1 cut(s)	1231
TseFI	GTSAC	5 cut(s)	29, 230, 903, 1010, 1160
TseI	GCWGC	8 cut(s)	257, 404, 494, 963, 1047, 1233, 1236, 1239
Tsp45I	GTSAC	5 cut(s)	29, 230, 903, 1010, 1160
TspDTI	ATGAA	5 cut(s)	140, 587, 666, 822, 1329
TspGWI	ACGGA	3 cut(s)	351, 735, 891
TspRI	CASTG	1 cut(s)	1231
VneI	GTGCAC	1 cut(s)	1023
VpaK11BI	GGWCC	1 cut(s)	1212
XmiI	GTMKAC	1 cut(s)	129
XspI	CTAG	4 cut(s)	609, 824, 1037, 1130
Zsp2I	ATGCAT	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.