E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 195 |
| AcoI | YGGCCR | 1 cut(s) | 83 |
| AgsI | TTSAA | 3 cut(s) | 22, 97, 187 |
| AluBI | AGCT | 5 cut(s) | 38, 47, 68, 112, 131 |
| AluI | AGCT | 5 cut(s) | 38, 47, 68, 112, 131 |
| AoxI | GGCC | 2 cut(s) | 83, 144 |
| ApeKI | GCWGC | 1 cut(s) | 44 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| BalI | TGGCCA | 1 cut(s) | 85 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 3 cut(s) | 94, 223, 241 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 198, 232 |
| BisI | GCNGC | 1 cut(s) | 45 |
| BlpI | GCTNAGC | 1 cut(s) | 69 |
| BlsI | GCNGC | 1 cut(s) | 46 |
| BmsI | GCATC | 1 cut(s) | 218 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 69 |
| BsaBI | GATNNNNATC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 1 cut(s) | 280 |
| Bse8I | GATNNNNATC | 1 cut(s) | 255 |
| BseDI | CCNNGG | 1 cut(s) | 280 |
| BseGI | GGATG | 2 cut(s) | 252, 256 |
| BseJI | GATNNNNATC | 1 cut(s) | 255 |
| BseMII | CTCAG | 2 cut(s) | 60, 255 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BsgI | GTGCAG | 1 cut(s) | 63 |
| BshFI | GGCC | 2 cut(s) | 85, 146 |
| BsmI | GAATGC | 2 cut(s) | 220, 232 |
| BsnI | GGCC | 2 cut(s) | 85, 146 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 69 |
| BspACI | CCGC | 1 cut(s) | 195 |
| BspANI | GGCC | 2 cut(s) | 85, 146 |
| BspCNI | CTCAG | 2 cut(s) | 61, 256 |
| BssECI | CCNNGG | 1 cut(s) | 280 |
| BssT1I | CCWWGG | 1 cut(s) | 280 |
| BstDEI | CTNAG | 2 cut(s) | 69, 264 |
| BstF5I | GGATG | 2 cut(s) | 252, 256 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 44 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| BsuRI | GGCC | 2 cut(s) | 85, 146 |
| BtgZI | GCGATG | 1 cut(s) | 201 |
| BtsCI | GGATG | 2 cut(s) | 252, 256 |
| CviAII | CATG | 1 cut(s) | 32 |
| CviJI | RGCY | 9 cut(s) | 38, 47, 68, 73, 85, 112, 131, 146, 285 |
| CviKI_1 | RGCY | 9 cut(s) | 38, 47, 68, 73, 85, 112, 131, 146, 285 |
| DdeI | CTNAG | 2 cut(s) | 69, 264 |
| EaeI | YGGCCR | 1 cut(s) | 83 |
| Eco130I | CCWWGG | 1 cut(s) | 280 |
| Eco147I | AGGCCT | 1 cut(s) | 146 |
| EcoT14I | CCWWGG | 1 cut(s) | 280 |
| ErhI | CCWWGG | 1 cut(s) | 280 |
| FaeI | CATG | 1 cut(s) | 35 |
| FaiI | YATR | 6 cut(s) | 7, 9, 11, 33, 50, 242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 167, 199 |
| FatI | CATG | 1 cut(s) | 31 |
| Fnu4HI | GCNGC | 1 cut(s) | 45 |
| FokI | GGATG | 2 cut(s) | 259, 263 |
| Fsp4HI | GCNGC | 1 cut(s) | 45 |
| GluI | GCNGC | 1 cut(s) | 45 |
| HaeIII | GGCC | 2 cut(s) | 85, 146 |
| Hin1II | CATG | 1 cut(s) | 35 |
| HindIII | AAGCTT | 1 cut(s) | 129 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy188I | TCNGA | 3 cut(s) | 226, 238, 265 |
| Hpy188III | TCNNGA | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 209, 232 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 44 |
| HpyF3I | CTNAG | 2 cut(s) | 69, 264 |
| Hsp92II | CATG | 1 cut(s) | 35 |
| LmnI | GCTCC | 1 cut(s) | 35 |
| LpnPI | CCDG | 2 cut(s) | 62, 128 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| LweI | GCATC | 1 cut(s) | 218 |
| MboII | GAAGA | 1 cut(s) | 187 |
| MlsI | TGGCCA | 1 cut(s) | 85 |
| MluNI | TGGCCA | 1 cut(s) | 85 |
| MnlI | CCTC | 6 cut(s) | 84, 112, 115, 148, 162, 259 |
| Mox20I | TGGCCA | 1 cut(s) | 85 |
| MscI | TGGCCA | 1 cut(s) | 85 |
| MseI | TTAA | 2 cut(s) | 114, 149 |
| MslI | CAYNNNNRTG | 2 cut(s) | 30, 225 |
| Msp20I | TGGCCA | 1 cut(s) | 85 |
| MspA1I | CMGCKG | 1 cut(s) | 68 |
| Mva1269I | GAATGC | 2 cut(s) | 220, 232 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 44 |
| NlaIII | CATG | 1 cut(s) | 35 |
| PceI | AGGCCT | 1 cut(s) | 146 |
| PctI | GAATGC | 2 cut(s) | 220, 232 |
| PkrI | GCNGC | 1 cut(s) | 46 |
| PvuII | CAGCTG | 1 cut(s) | 68 |
| RseI | CAYNNNNRTG | 2 cut(s) | 30, 225 |
| SaqAI | TTAA | 2 cut(s) | 114, 149 |
| SatI | GCNGC | 1 cut(s) | 45 |
| SetI | ASST | 7 cut(s) | 16, 40, 49, 70, 94, 114, 133 |
| SfaNI | GCATC | 1 cut(s) | 218 |
| SgeI | CNNG | 7 cut(s) | 44, 51, 89, 155, 175, 196, 218 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 30, 225 |
| SseBI | AGGCCT | 1 cut(s) | 146 |
| SsiI | CCGC | 1 cut(s) | 195 |
| StuI | AGGCCT | 1 cut(s) | 146 |
| StyI | CCWWGG | 1 cut(s) | 280 |
| Tru1I | TTAA | 2 cut(s) | 114, 149 |
| Tru9I | TTAA | 2 cut(s) | 114, 149 |
| TseI | GCWGC | 1 cut(s) | 44 |
| TspDTI | ATGAA | 1 cut(s) | 287 |
| TspGWI | ACGGA | 2 cut(s) | 48, 167 |